=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdc08kOc/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1_arm64.buildinfo Source: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 rebuilderd-worker node: codethink02-arm64 +------------------------------------------------------------------------------+ | Downloading sources Sat, 29 Nov 2025 20:42:13 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.5 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [148 kB] Get:7 https://deb.debian.org/debian sid InRelease [176 kB] Get:8 https://deb.debian.org/debian experimental InRelease [82.8 kB] Get:9 https://deb.debian.org/debian trixie/non-free-firmware Sources [6548 B] Get:10 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [95.1 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [35.8 kB] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [105 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [1032 B] Get:17 https://deb.debian.org/debian forky/main Sources [10.7 MB] Get:18 https://deb.debian.org/debian forky/non-free-firmware Sources [7408 B] Get:19 https://deb.debian.org/debian sid/non-free-firmware Sources [9684 B] Get:20 https://deb.debian.org/debian sid/main Sources [11.2 MB] Get:21 https://deb.debian.org/debian experimental/main Sources [364 kB] Get:22 https://deb.debian.org/debian experimental/non-free-firmware Sources [3052 B] Fetched 33.8 MB in 32s (1055 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/c/cctbx/cctbx_2025.2%2bds2%2b%7e3.23.0%2bds1-1.dsc' cctbx_2025.2+ds2+~3.23.0+ds1-1.dsc 4050 SHA256:d467f81ab162c8003fc5252727e7b5fc1495ea9cee989a99cdfb78e137a5f348 'https://deb.debian.org/debian/pool/main/c/cctbx/cctbx_2025.2%2bds2%2b%7e3.23.0%2bds1.orig-dxtbx.tar.xz' cctbx_2025.2+ds2+~3.23.0+ds1.orig-dxtbx.tar.xz 379044 SHA256:ef443acb8ab0fe7c90d8eaaf231e50a0771b2f54cc993570b20cefb7fd1d72ca 'https://deb.debian.org/debian/pool/main/c/cctbx/cctbx_2025.2%2bds2%2b%7e3.23.0%2bds1.orig.tar.xz' cctbx_2025.2+ds2+~3.23.0+ds1.orig.tar.xz 23958624 SHA256:fa3b4caaa27e77f2854dbcd64d410ee60c33eb575ff58871c3422034f1c4e07b 'https://deb.debian.org/debian/pool/main/c/cctbx/cctbx_2025.2%2bds2%2b%7e3.23.0%2bds1-1.debian.tar.xz' cctbx_2025.2+ds2+~3.23.0+ds1-1.debian.tar.xz 423376 SHA256:68a80eac5bb928cdad2aa8199826a4d0b87589258dfc83926b84b606ce647302 ef443acb8ab0fe7c90d8eaaf231e50a0771b2f54cc993570b20cefb7fd1d72ca cctbx_2025.2+ds2+~3.23.0+ds1.orig-dxtbx.tar.xz fa3b4caaa27e77f2854dbcd64d410ee60c33eb575ff58871c3422034f1c4e07b cctbx_2025.2+ds2+~3.23.0+ds1.orig.tar.xz 68a80eac5bb928cdad2aa8199826a4d0b87589258dfc83926b84b606ce647302 cctbx_2025.2+ds2+~3.23.0+ds1-1.debian.tar.xz d467f81ab162c8003fc5252727e7b5fc1495ea9cee989a99cdfb78e137a5f348 cctbx_2025.2+ds2+~3.23.0+ds1-1.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Sat, 29 Nov 2025 20:42:46 +0000 | +------------------------------------------------------------------------------+ Rebuilding cctbx=2025.2+ds2+~3.23.0+ds1-1 in /srv/rebuilderd/tmp/rebuilderdc08kOc/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdc08kOc/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdc08kOc/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1_arm64.buildinfo /srv/rebuilderd/tmp/rebuilderdc08kOc/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1_arm64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [176 kB] Get:2 http://snapshot.debian.org/archive/debian/20251025T023803Z sid InRelease [207 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 Packages [10.2 MB] Get:4 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 Packages [10.1 MB] Fetched 20.7 MB in 2s (9051 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20251025T023803Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main arm64 libwayland-client0 arm64 1.24.0-2+b1 [27.5 kB] Fetched 27.5 kB in 0s (613 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_sspqyfd/libwayland-client0_1.24.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libunbound8 arm64 1.24.1-1 [559 kB] Fetched 559 kB in 0s (13.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2m16663y/libunbound8_1.24.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libtinfo6 arm64 6.5+20250216-2 [341 kB] Fetched 341 kB in 0s (7532 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcz3dwh6x/libtinfo6_6.5+20250216-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libavif16 arm64 1.3.0-1+b1 [127 kB] Fetched 127 kB in 0s (2906 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxx4tuc5o/libavif16_1.3.0-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdbus-1-3 arm64 1.16.2-2 [169 kB] Fetched 169 kB in 0s (1689 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj1fi1ok_/libdbus-1-3_1.16.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libstdc++-14-dev arm64 14.3.0-10 [2568 kB] Fetched 2568 kB in 0s (91.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0ys6dxpe/libstdc++-14-dev_14.3.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnl-route-3-200 arm64 3.11.0-2 [176 kB] Fetched 176 kB in 0s (7650 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkcfmmw65/libnl-route-3-200_3.11.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxnvctrl0 arm64 535.171.04-1+b2 [14.0 kB] Fetched 14.0 kB in 0s (1018 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbt2_mum_/libxnvctrl0_535.171.04-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-bin arm64 2.41-12 [551 kB] Fetched 551 kB in 0s (31.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk8cxeqi1/libc-bin_2.41-12_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 binutils arm64 2.45-8 [263 kB] Fetched 263 kB in 0s (17.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf7ghwgiw/binutils_2.45-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxinerama1 arm64 2:1.1.4-3+b4 [16.0 kB] Fetched 16.0 kB in 0s (1210 kB/s) dpkg-name: info: moved 'libxinerama1_2%3a1.1.4-3+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmpf7vp7ovx/libxinerama1_1.1.4-3+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libthai-data all 0.1.29-2 [168 kB] Fetched 168 kB in 0s (16.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2z6e611f/libthai-data_0.1.29-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 78.1.1-0.1 [738 kB] Fetched 738 kB in 0s (45.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpby7ikduk/python3-setuptools_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-thread1.83-dev arm64 1.83.0-5 [277 kB] Fetched 277 kB in 0s (3173 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgr89vv4u/libboost-thread1.83-dev_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmmdb2-0 arm64 2.0.22-1+b2 [309 kB] Fetched 309 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu2yn2nmf/libmmdb2-0_2.0.22-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwebpdemux2 arm64 1.5.0-0.1 [113 kB] Fetched 113 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpay93ene4/libwebpdemux2_1.5.0-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbrotli-dev arm64 1.1.0-2+b7 [308 kB] Fetched 308 kB in 0s (24.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphjxwry61/libbrotli-dev_1.1.0-2+b7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmp-dev arm64 2:6.3.0+dfsg-5 [621 kB] Fetched 621 kB in 0s (26.2 MB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpgmczcqll/libgmp-dev_6.3.0+dfsg-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdrm-common all 2.4.127-1 [9060 B] Fetched 9060 B in 0s (340 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpencfky85/libdrm-common_2.4.127-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libccp4-dev arm64 8.0.0-5 [43.0 kB] Fetched 43.0 kB in 0s (2216 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7fn563ui/libccp4-dev_8.0.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgcc-s1 arm64 15.2.0-7 [53.5 kB] Fetched 53.5 kB in 0s (5228 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf2ifnnqb/libgcc-s1_15.2.0-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 perl-modules-5.40 all 5.40.1-6 [3019 kB] Fetched 3019 kB in 0s (106 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv18cqvxf/perl-modules-5.40_5.40.1-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo arm64 1:2.1.5-4 [173 kB] Fetched 173 kB in 0s (9594 kB/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpl24cume2/libjpeg62-turbo_2.1.5-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg-dev arm64 1:2.1.5-4 [72.2 kB] Fetched 72.2 kB in 0s (2896 kB/s) dpkg-name: info: moved 'libjpeg-dev_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmp3vspwgo4/libjpeg-dev_2.1.5-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-biopython arm64 1.85+dfsg-5 [1660 kB] Fetched 1660 kB in 0s (50.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp76p8hj2_/python3-biopython_1.85+dfsg-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcursor1 arm64 1:1.2.3-1 [39.3 kB] Fetched 39.3 kB in 0s (1813 kB/s) dpkg-name: info: moved 'libxcursor1_1%3a1.2.3-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpp3_whcn0/libxcursor1_1.2.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcap-ng0 arm64 0.8.5-4+b1 [17.0 kB] Fetched 17.0 kB in 0s (957 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpazxjrn1e/libcap-ng0_0.8.5-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-glx0 arm64 1.17.0-2+b1 [123 kB] Fetched 123 kB in 0s (8084 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwes54uj3/libxcb-glx0_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssl3t64 arm64 3.5.4-1 [2725 kB] Fetched 2725 kB in 0s (109 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvcpgncbf/libssl3t64_3.5.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.5.0-1 [33.0 kB] Fetched 33.0 kB in 0s (2674 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppa6vi3wp/python3-inflect_7.5.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxdmcp-dev arm64 1:1.1.5-1 [44.2 kB] Fetched 44.2 kB in 0s (3136 kB/s) dpkg-name: info: moved 'libxdmcp-dev_1%3a1.1.5-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpo1a8ocet/libxdmcp-dev_1.1.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Fetched 43.7 kB in 0s (1867 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmphrpxww56/file_5.46-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B] Fetched 3828 B in 0s (149 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfvvnegou/libboost-dev_1.83.0.2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-serialization1.83.0 arm64 1.83.0-5 [325 kB] Fetched 325 kB in 0s (14.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq4uvjrr8/libboost-serialization1.83.0_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libann-cctbx-dev arm64 1.1.2+doc-9+b2 [43.6 kB] Fetched 43.6 kB in 0s (4186 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7n_rwtg_/libann-cctbx-dev_1.1.2+doc-9+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-cpp-310 arm64 1.14.5+repack-4 [129 kB] Fetched 129 kB in 0s (2349 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgt9_tv64/libhdf5-cpp-310_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgl1 arm64 1.7.0-1+b2 [90.9 kB] Fetched 90.9 kB in 0s (5671 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1_55yngo/libgl1_1.7.0-1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 gtk-update-icon-cache arm64 4.20.2+ds-1 [52.6 kB] Fetched 52.6 kB in 0s (2998 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxqi4f1g3/gtk-update-icon-cache_4.20.2+ds-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.8.0-1 [71.7 kB] Fetched 71.7 kB in 0s (3037 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvlnxuate/python3-more-itertools_10.8.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (4519 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxbuqbgdp/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglut3.12 arm64 3.4.0-6 [135 kB] Fetched 135 kB in 0s (8476 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpub2s_68w/libglut3.12_3.4.0-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libavahi-client3 arm64 0.8-17 [48.5 kB] Fetched 48.5 kB in 0s (3272 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoos_0_od/libavahi-client3_0.8-17_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libevdev2 arm64 1.13.4+dfsg-1 [30.4 kB] Fetched 30.4 kB in 0s (1883 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5iga4w12/libevdev2_1.13.4+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmp10 arm64 2:6.3.0+dfsg-5 [535 kB] Fetched 535 kB in 0s (44.4 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpsomhtwdl/libgmp10_6.3.0+dfsg-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgnutls30t64 arm64 3.8.10-2 [1395 kB] Fetched 1395 kB in 0s (67.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpozwfqqrg/libgnutls30t64_3.8.10-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-gnutls8 arm64 1.16.0-1 [23.8 kB] Fetched 23.8 kB in 0s (863 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpam1zzbd1/libngtcp2-crypto-gnutls8_1.16.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-numpy-dev arm64 1.83.0.2+b2 [3632 B] Fetched 3632 B in 0s (333 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmple3y95dw/libboost-numpy-dev_1.83.0.2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-ossl-dev arm64 1.16.0-1 [27.6 kB] Fetched 27.6 kB in 0s (1780 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpikzrxo8f/libngtcp2-crypto-ossl-dev_1.16.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pycbf arm64 0.9.7+dfsg1-5.1 [158 kB] Fetched 158 kB in 0s (8194 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmqs05j6d/python3-pycbf_0.9.7+dfsg1-5.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libopengl0 arm64 1.7.0-1+b2 [32.1 kB] Fetched 32.1 kB in 0s (3118 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyycw46dw/libopengl0_1.7.0-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwebpmux3 arm64 1.5.0-0.1 [125 kB] Fetched 125 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpecmbpuvq/libwebpmux3_1.5.0-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Fetched 308 kB in 0s (22.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeh235lso/libbrotli1_1.1.0-2+b7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgbm1 arm64 25.2.5-1 [45.4 kB] Fetched 45.4 kB in 0s (1796 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpag51b1q3/libgbm1_25.2.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdeflate0 arm64 1.23-2 [42.4 kB] Fetched 42.4 kB in 0s (1395 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmmqa3lep/libdeflate0_1.23-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libllvm17t64 arm64 1:17.0.6-22+b3 [21.3 MB] Fetched 21.3 MB in 0s (146 MB/s) dpkg-name: info: moved 'libllvm17t64_1%3a17.0.6-22+b3_arm64.deb' to '/srv/rebuilderd/tmp/tmp9oarxmu8/libllvm17t64_17.0.6-22+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 diffutils arm64 1:3.12-1 [397 kB] Fetched 397 kB in 0s (13.5 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpmt4it1n9/diffutils_3.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc-dev-bin arm64 2.41-12 [57.4 kB] Fetched 57.4 kB in 0s (3052 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6doi0egi/libc-dev-bin_2.41-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-nxmx all 0.0.4-1 [16.1 kB] Fetched 16.1 kB in 0s (806 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa9euk8rp/python3-nxmx_0.0.4-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-randr0 arm64 1.17.0-2+b1 [117 kB] Fetched 117 kB in 0s (5055 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3egwaxku/libxcb-randr0_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Fetched 11.4 kB in 0s (942 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpln4x5mj3/python3-jaraco.text_4.0.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-pip all 25.2+dfsg-1 [1386 kB] Fetched 1386 kB in 0s (61.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt1ih4wef/python3-pip_25.2+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libblkid1 arm64 2.41.2-4 [167 kB] Fetched 167 kB in 0s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfvn9edyq/libblkid1_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhogweed6t64 arm64 3.10.2-1 [332 kB] Fetched 332 kB in 0s (8636 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp07foudy3/libhogweed6t64_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.28 [941 kB] Fetched 941 kB in 0s (73.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppdcidlxb/debhelper_13.28_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libinput-bin arm64 1.28.1-1 [26.4 kB] Fetched 26.4 kB in 0s (1388 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdbiil1ob/libinput-bin_1.28.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-render0 arm64 1.17.0-2+b1 [115 kB] Fetched 115 kB in 0s (6180 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp66wyx98s/libxcb-render0_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 x11-common all 1:7.7+26 [217 kB] Fetched 217 kB in 0s (16.6 MB/s) dpkg-name: info: moved 'x11-common_1%3a7.7+26_all.deb' to '/srv/rebuilderd/tmp/tmpebehb588/x11-common_7.7+26_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.13.7-1 [10.2 kB] Fetched 10.2 kB in 0s (592 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphwh7sey9/libpython3-stdlib_3.13.7-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 base-files arm64 14 [72.9 kB] Fetched 72.9 kB in 0s (3623 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzxjo8ggf/base-files_14_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 gcc-15-base arm64 15.2.0-7 [53.3 kB] Fetched 53.3 kB in 0s (4327 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa5tzxs7a/gcc-15-base_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpc3 arm64 1.3.1-2 [50.2 kB] Fetched 50.2 kB in 0s (2405 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7vg5iiwz/libmpc3_1.3.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-chrono1.83.0t64 arm64 1.83.0-5 [240 kB] Fetched 240 kB in 0s (9308 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzt2v5ja7/libboost-chrono1.83.0t64_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libacl1 arm64 2.3.2-2+b1 [32.2 kB] Fetched 32.2 kB in 0s (2167 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbdlo35jg/libacl1_2.3.2-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqhull-r8.0 arm64 2020.2-7 [229 kB] Fetched 229 kB in 0s (9732 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpojiqsf3o/libqhull-r8.0_2020.2-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Fetched 224 kB in 0s (17.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm393ye18/python3-pkg-resources_78.1.1-0.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-certifi all 2025.1.31+ds-1 [9652 B] Fetched 9652 B in 0s (399 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpui0z99lu/python3-certifi_2025.1.31+ds-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-numpy arm64 1:2.3.3+ds-3 [3589 kB] Fetched 3589 kB in 0s (64.8 MB/s) dpkg-name: info: moved 'python3-numpy_1%3a2.3.3+ds-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpiu8lnicu/python3-numpy_2.3.3+ds-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 grep arm64 3.12-1 [440 kB] Fetched 440 kB in 0s (20.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn8xz2fan/grep_3.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 build-essential arm64 12.12 [4624 B] Fetched 4624 B in 0s (320 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprzbnsch0/build-essential_12.12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-numpy1.83.0 arm64 1.83.0-5 [241 kB] Fetched 241 kB in 0s (4931 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy8z9rxb_/libboost-numpy1.83.0_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 adwaita-icon-theme all 49.0-1 [507 kB] Fetched 507 kB in 0s (19.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphenli5o9/adwaita-icon-theme_49.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-idna all 3.10-1 [42.0 kB] Fetched 42.0 kB in 0s (3871 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi6xcxlwu/python3-idna_3.10-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fftw-dev arm64 2.1.5-7+b1 [242 kB] Fetched 242 kB in 0s (14.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7czz_0_1/fftw-dev_2.1.5-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-present0 arm64 1.17.0-2+b1 [106 kB] Fetched 106 kB in 0s (4793 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl8ebbz4f/libxcb-present0_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fontconfig-config arm64 2.15.0-2.4 [318 kB] Fetched 318 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp62fblck9/fontconfig-config_2.15.0-2.4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xkb-data all 2.42-1 [790 kB] Fetched 790 kB in 0s (30.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpolotf7o6/xkb-data_2.42-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpopt0 arm64 1.19+dfsg-2 [42.8 kB] Fetched 42.8 kB in 0s (2844 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpea1fuv3n/libpopt0_1.19+dfsg-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (1258 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0o05ao5l/media-types_14.0.0_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.9-1 [858 kB] Fetched 858 kB in 0s (37.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzyrt18j_/libpython3.13-minimal_3.13.9-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-fs all 2.4.16-8 [95.2 kB] Fetched 95.2 kB in 0s (4290 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp81ojatfk/python3-fs_2.4.16-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-psutil arm64 7.1.0-1 [224 kB] Fetched 224 kB in 0s (5138 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7fbculbq/python3-psutil_7.1.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Fetched 47.3 kB in 0s (3216 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoky39l2i/libtasn1-6_4.20.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-decorator all 5.2.1-2 [33.0 kB] Fetched 33.0 kB in 0s (2198 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphywznkah/python3-decorator_5.2.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sed arm64 4.9-2+b1 [326 kB] Fetched 326 kB in 0s (10.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplf6wpfbx/sed_4.9-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.20-2 [315 kB] Fetched 315 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8izeu1sf/m4_1.4.20-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxss1 arm64 1:1.2.3-1+b3 [17.1 kB] Fetched 17.1 kB in 0s (905 kB/s) dpkg-name: info: moved 'libxss1_1%3a1.2.3-1+b3_arm64.deb' to '/srv/rebuilderd/tmp/tmpz9w93d74/libxss1_1.2.3-1+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgssrpc4t64 arm64 1.21.3-5 [57.2 kB] Fetched 57.2 kB in 0s (3079 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxh7of717/libgssrpc4t64_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libraqm0 arm64 0.10.3-1 [13.6 kB] Fetched 13.6 kB in 0s (409 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxdks3ss2/libraqm0_0.10.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 pkgconf-bin arm64 1.8.1-4 [29.6 kB] Fetched 29.6 kB in 0s (2060 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3rlowsq9/pkgconf-bin_1.8.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwayland-egl1 arm64 1.24.0-2+b1 [6316 B] Fetched 6316 B in 0s (469 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw_1p3nyi/libwayland-egl1_1.24.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tar arm64 1.35+dfsg-3.1 [802 kB] Fetched 802 kB in 0s (50.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkjlm2b06/tar_1.35+dfsg-3.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpkgconf3 arm64 1.8.1-4 [35.3 kB] Fetched 35.3 kB in 0s (1623 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgnz_aoyp/libpkgconf3_1.8.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Fetched 24.9 kB in 0s (1083 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeq5ewint/libcom-err2_1.47.2-3+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 openssl arm64 3.5.4-1 [1457 kB] Fetched 1457 kB in 0s (31.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphecufriq/openssl_3.5.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-cycler all 0.12.1-2 [9616 B] Fetched 9616 B in 0s (558 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8qbqafv9/python3-cycler_0.12.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgfortran5 arm64 15.2.0-7 [371 kB] Fetched 371 kB in 0s (15.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppqvbpw6n/libgfortran5_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-matplotlib arm64 3.10.7+dfsg1-1 [22.5 MB] Fetched 22.5 MB in 0s (132 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppcrrk6en/python3-matplotlib_3.10.7+dfsg1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-python1.83-dev arm64 1.83.0-5 [322 kB] Fetched 322 kB in 0s (12.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnfuh2o36/libboost-python1.83-dev_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 blt arm64 2.5.3+dfsg-8 [5984 B] Fetched 5984 B in 0s (538 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2clqkahm/blt_2.5.3+dfsg-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-wheel all 0.46.1-2 [21.7 kB] Fetched 21.7 kB in 0s (1773 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp72z6cpv5/python3-wheel_0.46.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgl-dev arm64 1.7.0-1+b2 [101 kB] Fetched 101 kB in 0s (7125 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0ja0yzhd/libgl-dev_1.7.0-1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libtsan2 arm64 15.2.0-7 [2401 kB] Fetched 2401 kB in 0s (83.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5hx8j75m/libtsan2_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-timer1.83.0 arm64 1.83.0-5 [235 kB] Fetched 235 kB in 0s (6277 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqdz4uzqh/libboost-timer1.83.0_1.83.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libpng16-16t64 arm64 1.6.50-1 [275 kB] Fetched 275 kB in 0s (22.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6qljx4dh/libpng16-16t64_1.6.50-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgav1-1 arm64 0.19.0-3+b1 [491 kB] Fetched 491 kB in 0s (26.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr02m5nd7/libgav1-1_0.19.0-3+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 jq arm64 1.8.1-4 [84.7 kB] Fetched 84.7 kB in 0s (5587 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkhnu6u4b/jq_1.8.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssm2 arm64 1.4.0-2+b3 [75.3 kB] Fetched 75.3 kB in 0s (6061 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo3kuugq9/libssm2_1.4.0-2+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcloudproviders0 arm64 0.3.6-3 [30.0 kB] Fetched 30.0 kB in 0s (1154 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw_w5ux4b/libcloudproviders0_0.3.6-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 comerr-dev arm64 2.1-1.47.2-3+b3 [56.9 kB] Fetched 56.9 kB in 0s (2169 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5swr_fb5/comerr-dev_2.1-1.47.2-3+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb1 arm64 1.17.0-2+b1 [143 kB] Fetched 143 kB in 0s (5941 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8yggf3mw/libxcb1_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Fetched 22.1 kB in 0s (1461 kB/s) dpkg-name: info: moved 'xorg-sgml-doctools_1%3a1.11-1.1_all.deb' to '/srv/rebuilderd/tmp/tmp4vnd7iki/xorg-sgml-doctools_1.11-1.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-all-dev arm64 3.13.7-1 [1068 B] Fetched 1068 B in 0s (65.6 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwvntp01m/libpython3-all-dev_3.13.7-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bash arm64 5.3-1 [1507 kB] Fetched 1507 kB in 0s (51.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp052q2165/bash_5.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgles2 arm64 1.7.0-1+b2 [18.0 kB] Fetched 18.0 kB in 0s (1326 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxf7hptlx/libgles2_1.7.0-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp2-14 arm64 1.64.0-1.1+b1 [71.7 kB] Fetched 71.7 kB in 0s (3386 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphpqyx6pg/libnghttp2-14_1.64.0-1.1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-python-dev arm64 1.83.0.2+b2 [3880 B] Fetched 3880 B in 0s (219 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvpzs0umb/libboost-python-dev_1.83.0.2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 hicolor-icon-theme all 0.18-2 [11.8 kB] Fetched 11.8 kB in 0s (659 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvkd7d72o/hicolor-icon-theme_0.18-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxi6 arm64 2:1.8.2-1 [77.8 kB] Fetched 77.8 kB in 0s (2372 kB/s) dpkg-name: info: moved 'libxi6_2%3a1.8.2-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpad2agply/libxi6_1.8.2-1_arm64.deb' Downloading dependency 1 of 641: libwayland-client0:arm64=1.24.0-2+b1 Downloading dependency 2 of 641: libunbound8:arm64=1.24.1-1 Downloading dependency 3 of 641: libtinfo6:arm64=6.5+20250216-2 Downloading dependency 4 of 641: libavif16:arm64=1.3.0-1+b1 Downloading dependency 5 of 641: libdbus-1-3:arm64=1.16.2-2 Downloading dependency 6 of 641: libstdc++-14-dev:arm64=14.3.0-10 Downloading dependency 7 of 641: libnl-route-3-200:arm64=3.11.0-2 Downloading dependency 8 of 641: libxnvctrl0:arm64=535.171.04-1+b2 Downloading dependency 9 of 641: libc-bin:arm64=2.41-12 Downloading dependency 10 of 641: binutils:arm64=2.45-8 Downloading dependency 11 of 641: libxinerama1:arm64=2:1.1.4-3+b4 Downloading dependency 12 of 641: libthai-data:arm64=0.1.29-2 Downloading dependency 13 of 641: python3-setuptools:arm64=78.1.1-0.1 Downloading dependency 14 of 641: libboost-thread1.83-dev:arm64=1.83.0-5 Downloading dependency 15 of 641: libmmdb2-0:arm64=2.0.22-1+b2 Downloading dependency 16 of 641: libwebpdemux2:arm64=1.5.0-0.1 Downloading dependency 17 of 641: libbrotli-dev:arm64=1.1.0-2+b7 Downloading dependency 18 of 641: libgmp-dev:arm64=2:6.3.0+dfsg-5 Downloading dependency 19 of 641: libdrm-common:arm64=2.4.127-1 Downloading dependency 20 of 641: libccp4-dev:arm64=8.0.0-5 Downloading dependency 21 of 641: libgcc-s1:arm64=15.2.0-7 Downloading dependency 22 of 641: perl-modules-5.40:arm64=5.40.1-6 Downloading dependency 23 of 641: libjpeg62-turbo:arm64=1:2.1.5-4 Downloading dependency 24 of 641: libjpeg-dev:arm64=1:2.1.5-4 Downloading dependency 25 of 641: python3-biopython:arm64=1.85+dfsg-5 Downloading dependency 26 of 641: libxcursor1:arm64=1:1.2.3-1 Downloading dependency 27 of 641: libcap-ng0:arm64=0.8.5-4+b1 Downloading dependency 28 of 641: libxcb-glx0:arm64=1.17.0-2+b1 Downloading dependency 29 of 641: libssl3t64:arm64=3.5.4-1 Downloading dependency 30 of 641: python3-inflect:arm64=7.5.0-1 Downloading dependency 31 of 641: libxdmcp-dev:arm64=1:1.1.5-1 Downloading dependency 32 of 641: file:arm64=1:5.46-5 Downloading dependency 33 of 641: libboost-dev:arm64=1.83.0.2+b2 Downloading dependency 34 of 641: libboost-serialization1.83.0:arm64=1.83.0-5 Downloading dependency 35 of 641: libann-cctbx-dev:arm64=1.1.2+doc-9+b2 Downloading dependency 36 of 641: libhdf5-cpp-310:arm64=1.14.5+repack-4 Downloading dependency 37 of 641: libgl1:arm64=1.7.0-1+b2 Downloading dependency 38 of 641: gtk-update-icon-cache:arm64=4.20.2+ds-1 Downloading dependency 39 of 641: python3-more-itertools:arm64=10.8.0-1 Downloading dependency 40 of 641: autotools-dev:arm64=20240727.1 Downloading dependency 41 of 641: libglut3.12:arm64=3.4.0-6 Downloading dependency 42 of 641: libavahi-client3:arm64=0.8-17 Downloading dependency 43 of 641: libevdev2:arm64=1.13.4+dfsg-1 Downloading dependency 44 of 641: libgmp10:arm64=2:6.3.0+dfsg-5 Downloading dependency 45 of 641: libgnutls30t64:arm64=3.8.10-2 Downloading dependency 46 of 641: libngtcp2-crypto-gnutls8:arm64=1.16.0-1 Downloading dependency 47 of 641: libboost-numpy-dev:arm64=1.83.0.2+b2 Downloading dependency 48 of 641: libngtcp2-crypto-ossl-dev:arm64=1.16.0-1 Downloading dependency 49 of 641: python3-pycbf:arm64=0.9.7+dfsg1-5.1 Downloading dependency 50 of 641: libopengl0:arm64=1.7.0-1+b2 Downloading dependency 51 of 641: libwebpmux3:arm64=1.5.0-0.1 Downloading dependency 52 of 641: libbrotli1:arm64=1.1.0-2+b7 Downloading dependency 53 of 641: libgbm1:arm64=25.2.5-1 Downloading dependency 54 of 641: libdeflate0:arm64=1.23-2 Downloading dependency 55 of 641: libllvm17t64:arm64=1:17.0.6-22+b3 Downloading dependency 56 of 641: diffutils:arm64=1:3.12-1 Downloading dependency 57 of 641: libc-dev-bin:arm64=2.41-12 Downloading dependency 58 of 641: python3-nxmx:arm64=0.0.4-1 Downloading dependency 59 of 641: libxcb-randr0:arm64=1.17.0-2+b1 Downloading dependency 60 of 641: python3-jaraco.text:arm64=4.0.0-1 Downloading dependency 61 of 641: python3-pip:arm64=25.2+dfsg-1 Downloading dependency 62 of 641: libblkid1:arm64=2.41.2-4 Downloading dependency 63 of 641: libhogweed6t64:arm64=3.10.2-1 Downloading dependency 64 of 641: debhelper:arm64=13.28 Downloading dependency 65 of 641: libinput-bin:arm64=1.28.1-1 Downloading dependency 66 of 641: libxcb-render0:arm64=1.17.0-2+b1 Downloading dependency 67 of 641: x11-common:arm64=1:7.7+26 Downloading dependency 68 of 641: libpython3-stdlib:arm64=3.13.7-1 Downloading dependency 69 of 641: base-files:arm64=14 Downloading dependency 70 of 641: gcc-15-base:arm64=15.2.0-7 Downloading dependency 71 of 641: libmpc3:arm64=1.3.1-2 Downloading dependency 72 of 641: libboost-chrono1.83.0t64:arm64=1.83.0-5 Downloading dependency 73 of 641: libacl1:arm64=2.3.2-2+b1 Downloading dependency 74 of 641: libqhull-r8.0:arm64=2020.2-7 Downloading dependency 75 of 641: python3-pkg-resources:arm64=78.1.1-0.1 Downloading dependency 76 of 641: python3-certifi:arm64=2025.1.31+ds-1 Downloading dependency 77 of 641: python3-numpy:arm64=1:2.3.3+ds-3 Downloading dependency 78 of 641: grep:arm64=3.12-1 Downloading dependency 79 of 641: build-essential:arm64=12.12 Downloading dependency 80 of 641: libboost-numpy1.83.0:arm64=1.83.0-5 Downloading dependency 81 of 641: adwaita-icon-theme:arm64=49.0-1 Downloading dependency 82 of 641: python3-idna:arm64=3.10-1 Downloading dependency 83 of 641: fftw-dev:arm64=2.1.5-7+b1 Downloading dependency 84 of 641: libxcb-present0:arm64=1.17.0-2+b1 Downloading dependency 85 of 641: fontconfig-config:arm64=2.15.0-2.4 Downloading dependency 86 of 641: xkb-data:arm64=2.42-1 Downloading dependency 87 of 641: libpopt0:arm64=1.19+dfsg-2 Downloading dependency 88 of 641: media-types:arm64=14.0.0 Downloading dependency 89 of 641: libpython3.13-minimal:arm64=3.13.9-1 Downloading dependency 90 of 641: python3-fs:arm64=2.4.16-8 Downloading dependency 91 of 641: python3-psutil:arm64=7.1.0-1 Downloading dependency 92 of 641: libtasn1-6:arm64=4.20.0-2 Downloading dependency 93 of 641: python3-decorator:arm64=5.2.1-2 Downloading dependency 94 of 641: sed:arm64=4.9-2+b1 Downloading dependency 95 of 641: m4:arm64=1.4.20-2 Downloading dependency 96 of 641: libxss1:arm64=1:1.2.3-1+b3 Downloading dependency 97 of 641: libgssrpc4t64:arm64=1.21.3-5 Downloading dependency 98 of 641: libraqm0:arm64=0.10.3-1 Downloading dependency 99 of 641: pkgconf-bin:arm64=1.8.1-4 Downloading dependency 100 of 641: libwayland-egl1:arm64=1.24.0-2+b1 Downloading dependency 101 of 641: tar:arm64=1.35+dfsg-3.1 Downloading dependency 102 of 641: libpkgconf3:arm64=1.8.1-4 Downloading dependency 103 of 641: libcom-err2:arm64=1.47.2-3+b3 Downloading dependency 104 of 641: openssl:arm64=3.5.4-1 Downloading dependency 105 of 641: python3-cycler:arm64=0.12.1-2 Downloading dependency 106 of 641: libgfortran5:arm64=15.2.0-7 Downloading dependency 107 of 641: python3-matplotlib:arm64=3.10.7+dfsg1-1 Downloading dependency 108 of 641: libboost-python1.83-dev:arm64=1.83.0-5 Downloading dependency 109 of 641: blt:arm64=2.5.3+dfsg-8 Downloading dependency 110 of 641: python3-wheel:arm64=0.46.1-2 Downloading dependency 111 of 641: libgl-dev:arm64=1.7.0-1+b2 Downloading dependency 112 of 641: libtsan2:arm64=15.2.0-7 Downloading dependency 113 of 641: libboost-timer1.83.0:arm64=1.83.0-5 Downloading dependency 114 of 641: libpng16-16t64:arm64=1.6.50-1 Downloading dependency 115 of 641: libgav1-1:arm64=0.19.0-3+b1 Downloading dependency 116 of 641: jq:arm64=1.8.1-4 Downloading dependency 117 of 641: libssm2:arm64=1.4.0-2+b3 Downloading dependency 118 of 641: libcloudproviders0:arm64=0.3.6-3 Downloading dependency 119 of 641: comerr-dev:arm64=2.1-1.47.2-3+b3 Downloading dependency 120 of 641: libxcb1:arm64=1.17.0-2+b1 Downloading dependency 121 of 641: xorg-sgml-doctools:arm64=1:1.11-1.1 Downloading dependency 122 of 641: libpython3-all-dev:arm64=3.13.7-1 Downloading dependency 123 of 641: bash:arm64=5.3-1 Downloading dependency 124 of 641: libgles2:arm64=1.7.0-1+b2 Downloading dependency 125 of 641: libnghttp2-14:arm64=1.64.0-1.1+b1 Downloading dependency 126 of 641: libboost-python-dev:arm64=1.83.0.2+b2 Downloading dependency 127 of 641: hicolor-icon-theme:arm64=0.18-2 Downloading dependency 128 of 641: libxi6:arm64=2:1.8.2-1 Downloading dependency 129 of 641: dpkg-dev:arm64=1.22.21Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg-dev all 1.22.21 [1338 kB] Fetched 1338 kB in 0s (39.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0cs_n1oj/dpkg-dev_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-dri3-0 arm64 1.17.0-2+b1 [107 kB] Fetched 107 kB in 0s (4130 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ea7zvus/libxcb-dri3-0_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (30.4 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpz011i5p8/libmagic-mgc_5.46-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgraphite2-3 arm64 1.3.14-11 [70.8 kB] Fetched 70.8 kB in 0s (2715 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp63u305i/libgraphite2-3_1.3.14-11_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libucx0 arm64 1.19.0+ds-1 [1081 kB] Fetched 1081 kB in 0s (64.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjulxpr8t/libucx0_1.19.0+ds-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-ordered-set all 4.1.0-1 [9628 B] Fetched 9628 B in 0s (353 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpafrtph0g/python3-ordered-set_4.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (615 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa4eeblpq/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.13.7-1 [27.2 kB] Fetched 27.2 kB in 0s (1184 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8eq05h2c/python3-minimal_3.13.7-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-chrono1.83-dev arm64 1.83.0-5 [245 kB] Fetched 245 kB in 0s (11.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9k12nshj/libboost-chrono1.83-dev_1.83.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-7 [11.1 MB] Fetched 11.1 MB in 0s (90.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa2yzypzh/g++-15-aarch64-linux-gnu_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libisl23 arm64 0.27-1 [601 kB] Fetched 601 kB in 0s (16.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmq19s2vx/libisl23_0.27-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 krb5-multidev arm64 1.21.3-5 [126 kB] Fetched 126 kB in 0s (3893 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy8bmnuvh/krb5-multidev_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgtk-3-common all 3.24.51-1 [4922 kB] Fetched 4922 kB in 0s (82.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqw90z9aq/libgtk-3-common_3.24.51-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libctf-nobfd0 arm64 2.45-8 [154 kB] Fetched 154 kB in 0s (5764 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpavqcstvv/libctf-nobfd0_2.45-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblzma5 arm64 5.8.1-2 [302 kB] Fetched 302 kB in 0s (19.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7ibw26mg/liblzma5_5.8.1-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Fetched 127 kB in 0s (6186 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiqjv062r/libgssapi-krb5-2_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwxgtk3.2-1t64 arm64 3.2.8+dfsg-2 [4146 kB] Fetched 4146 kB in 0s (79.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_eq81ffm/libwxgtk3.2-1t64_3.2.8+dfsg-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpixman-1-0 arm64 0.46.4-1 [174 kB] Fetched 174 kB in 0s (4084 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj49atx8y/libpixman-1-0_0.46.4-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 base-passwd arm64 3.6.7 [53.4 kB] Fetched 53.4 kB in 0s (1635 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcxy09myk/base-passwd_3.6.7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-natsort all 8.4.0-1 [38.9 kB] Fetched 38.9 kB in 0s (1151 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph7ut5766/python3-natsort_8.4.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-wxgtk4.0 arm64 4.2.3+dfsg-2 [6910 kB] Fetched 6910 kB in 0s (85.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdzkmy1dp/python3-wxgtk4.0_4.2.3+dfsg-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libann-cctbx0 arm64 1.1.2+doc-9+b2 [30.8 kB] Fetched 30.8 kB in 0s (1254 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmgccb2wh/libann-cctbx0_1.1.2+doc-9+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfftw3-double3 arm64 3.3.10-2+b1 [337 kB] Fetched 337 kB in 0s (21.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzhulbzwt/libfftw3-double3_3.3.10-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxrender1 arm64 1:0.9.12-1 [27.0 kB] Fetched 27.0 kB in 0s (1193 kB/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpqtoxs9y3/libxrender1_0.9.12-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libncursesw6 arm64 6.5+20250216-2 [124 kB] Fetched 124 kB in 0s (3374 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnyozfx6s/libncursesw6_6.5+20250216-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 unicode-data all 16.0.0-1 [9197 kB] Fetched 9197 kB in 0s (134 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvr9sanrb/unicode-data_16.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsvtav1enc2 arm64 2.3.0+dfsg-1 [1558 kB] Fetched 1558 kB in 0s (35.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpytgxz272/libsvtav1enc2_2.3.0+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g arm64 1:1.3.dfsg+really1.3.1-1+b1 [85.1 kB] Fetched 85.1 kB in 0s (3736 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp_4eggdrs/zlib1g_1.3.dfsg+really1.3.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-310 arm64 1.14.5+repack-4 [1177 kB] Fetched 1177 kB in 0s (31.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp644i7_7h/libhdf5-310_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pymol arm64 3.1.0+dfsg-1+b1 [3584 kB] Fetched 3584 kB in 0s (72.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvigs62vc/python3-pymol_3.1.0+dfsg-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pyqt5.sip arm64 12.17.1-1 [59.3 kB] Fetched 59.3 kB in 0s (3072 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1zmzq0qk/python3-pyqt5.sip_12.17.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.28 [92.4 kB] Fetched 92.4 kB in 0s (3804 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwih_hiqm/libdebhelper-perl_13.28_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglu1-mesa arm64 9.0.2-1.1+b3 [162 kB] Fetched 162 kB in 0s (5960 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppy8icz5w/libglu1-mesa_9.0.2-1.1+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Fetched 12.0 kB in 0s (610 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl4c3jagl/python3-jaraco.functools_4.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmpxx4ldbl arm64 2:6.3.0+dfsg-5 [329 kB] Fetched 329 kB in 0s (21.3 MB/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-5_arm64.deb' to '/srv/rebuilderd/tmp/tmplasihl76/libgmpxx4ldbl_6.3.0+dfsg-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwayland-cursor0 arm64 1.24.0-2+b1 [12.2 kB] Fetched 12.2 kB in 0s (619 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwcejae0u/libwayland-cursor0_1.24.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcomposite1 arm64 1:0.4.6-1 [16.4 kB] Fetched 16.4 kB in 0s (934 kB/s) dpkg-name: info: moved 'libxcomposite1_1%3a0.4.6-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpf758ppc1/libxcomposite1_0.4.6-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbz2-1.0 arm64 1.0.8-6 [37.8 kB] Fetched 37.8 kB in 0s (1471 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwtjf6b3c/libbz2-1.0_1.0.8-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-requests all 2.32.5+dfsg-1 [72.4 kB] Fetched 72.4 kB in 0s (4808 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfjsuyalg/python3-requests_2.32.5+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxext6 arm64 2:1.3.4-1+b3 [49.2 kB] Fetched 49.2 kB in 0s (2151 kB/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b3_arm64.deb' to '/srv/rebuilderd/tmp/tmpoub1e41u/libxext6_1.3.4-1+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 hostname arm64 3.25 [10.8 kB] Fetched 10.8 kB in 0s (909 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp378te0wr/hostname_3.25_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgl1-mesa-dri arm64 25.2.5-1 [46.8 kB] Fetched 46.8 kB in 0s (3688 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprwg84wwm/libgl1-mesa-dri_25.2.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnuma1 arm64 2.0.19-1 [21.6 kB] Fetched 21.6 kB in 0s (1057 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp72tjpjse/libnuma1_2.0.19-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 dh-python all 6.20250414 [116 kB] Fetched 116 kB in 0s (4526 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo0gmdhdi/dh-python_6.20250414_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnotify4 arm64 0.8.6-2 [26.0 kB] Fetched 26.0 kB in 0s (1007 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpttbcza8s/libnotify4_0.8.6-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libibmad5 arm64 56.1-1+b1 [42.8 kB] Fetched 42.8 kB in 0s (2708 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxgg7rw44/libibmad5_56.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-crypto-ossl0 arm64 1.16.0-1 [25.7 kB] Fetched 25.7 kB in 0s (1334 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp97zvobbs/libngtcp2-crypto-ossl0_1.16.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libattr1 arm64 1:2.5.2-3 [22.7 kB] Fetched 22.7 kB in 0s (2052 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_arm64.deb' to '/srv/rebuilderd/tmp/tmpek6kjvmr/libattr1_2.5.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.16-2 [100 kB] Fetched 100 kB in 0s (7864 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwzdevayb/dwz_0.16-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-all-dev arm64 3.13.7-1 [1068 B] Fetched 1068 B in 0s (51.4 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0r4ibs6r/python3-all-dev_3.13.7-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-thread1.83.0 arm64 1.83.0-5 [266 kB] Fetched 266 kB in 0s (24.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppm248_xr/libboost-thread1.83.0_1.83.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libcurl4t64 arm64 8.17.0~rc2-1 [369 kB] Fetched 369 kB in 0s (16.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjx2g_p9h/libcurl4t64_8.17.0~rc2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwebp-dev arm64 1.5.0-0.1 [406 kB] Fetched 406 kB in 0s (17.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp21134x4j/libwebp-dev_1.5.0-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-freetype all 2.5.1-2 [89.4 kB] Fetched 89.4 kB in 0s (3129 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphom0rqwl/python3-freetype_2.5.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fftw2 arm64 2.1.5-7+b1 [203 kB] Fetched 203 kB in 0s (9866 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp32lj7b49/fftw2_2.1.5-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pluggy all 1.6.0-1 [27.1 kB] Fetched 27.1 kB in 0s (2199 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi8dk0w_b/python3-pluggy_1.6.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-platformdirs all 4.4.0-1 [16.7 kB] Fetched 16.7 kB in 0s (1026 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzxwuazpc/python3-platformdirs_4.4.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgomp1 arm64 15.2.0-7 [126 kB] Fetched 126 kB in 0s (7266 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuziyblt2/libgomp1_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13-tk arm64 3.13.9-1 [106 kB] Fetched 106 kB in 0s (6159 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxog816oa/python3.13-tk_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5network5t64 arm64 5.15.17+dfsg-4 [651 kB] Fetched 651 kB in 0s (32.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8bfqya3f/libqt5network5t64_5.15.17+dfsg-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 patch arm64 2.8-2 [128 kB] Fetched 128 kB in 0s (6285 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1307cy6u/patch_2.8-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-fonttools arm64 4.57.0-2 [1368 kB] Fetched 1368 kB in 0s (43.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpby8_4i_9/python3-fonttools_4.57.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxshmfence1 arm64 1.3.3-1 [11.1 kB] Fetched 11.1 kB in 0s (624 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzs5i85el/libxshmfence1_1.3.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pygments all 2.18.0+dfsg-2 [836 kB] Fetched 836 kB in 0s (39.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd8q0dh4w/python3-pygments_2.18.0+dfsg-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-dev arm64 2:1.8.12-1 [883 kB] Fetched 883 kB in 0s (37.9 MB/s) dpkg-name: info: moved 'libx11-dev_2%3a1.8.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp0d15sbi9/libx11-dev_1.8.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pyqt5.qtopengl arm64 5.15.11+dfsg-3 [198 kB] Fetched 198 kB in 0s (9216 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpal0qidia/python3-pyqt5.qtopengl_5.15.11+dfsg-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpcre2-8-0 arm64 10.46-1 [262 kB] Fetched 262 kB in 0s (22.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2suuqc1o/libpcre2-8-0_10.46-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libimagequant0 arm64 4.4.0-3 [216 kB] Fetched 216 kB in 0s (15.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyleerwbi/libimagequant0_4.4.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-10 [19.8 kB] Fetched 19.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp50flx30u/libsasl2-modules-db_2.1.28+dfsg1-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libeigen3-dev all 3.4.0-5 [1034 kB] Fetched 1034 kB in 0s (70.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvnerqcyf/libeigen3-dev_3.4.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ca-certificates all 20250419 [162 kB] Fetched 162 kB in 0s (1491 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpirkjmvvo/ca-certificates_20250419_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13 arm64 3.13.9-1 [2055 kB] Fetched 2055 kB in 0s (76.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqeyevpln/libpython3.13_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libopenjp2-7 arm64 2.5.3-2.1 [189 kB] Fetched 189 kB in 0s (16.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptrjjdtiy/libopenjp2-7_2.5.3-2.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libyuv0 arm64 0.0.1919.20250919-1 [138 kB] Fetched 138 kB in 0s (12.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdqjc900v/libyuv0_0.0.1919.20250919-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pyqt5 arm64 5.15.11+dfsg-3 [2294 kB] Fetched 2294 kB in 0s (86.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxm7qhr1q/python3-pyqt5_5.15.11+dfsg-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-flexcache all 0.3-2 [13.5 kB] Fetched 13.5 kB in 0s (593 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnkpfbpnl/python3-flexcache_0.3-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglx0 arm64 1.7.0-1+b2 [31.1 kB] Fetched 31.1 kB in 0s (1938 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgbi2n3aj/libglx0_1.7.0-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Fetched 9716 B in 0s (701 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdck3hw0q/libkeyutils1_1.6.3-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdouble-conversion3 arm64 3.3.1-2 [37.5 kB] Fetched 37.5 kB in 0s (407 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4w4cmsm2/libdouble-conversion3_3.3.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 login.defs all 1:4.18.0-2 [211 kB] Fetched 211 kB in 0s (19.5 MB/s) dpkg-name: info: moved 'login.defs_1%3a4.18.0-2_all.deb' to '/srv/rebuilderd/tmp/tmpjtrmcdwb/login.defs_4.18.0-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libcurl4-openssl-dev arm64 8.17.0~rc2-1 [505 kB] Fetched 505 kB in 0s (28.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6lbpiv9a/libcurl4-openssl-dev_8.17.0~rc2-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-six all 1.17.0-1 [16.5 kB] Fetched 16.5 kB in 0s (1025 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsh62lf3v/python3-six_1.17.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5opengl5t64 arm64 5.15.17+dfsg-4 [144 kB] Fetched 144 kB in 0s (8655 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpysnano4i/libqt5opengl5t64_5.15.17+dfsg-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-system1.83-dev arm64 1.83.0-5 [232 kB] Fetched 232 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0e90ietu/libboost-system1.83-dev_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libz3-4 arm64 4.13.3-1 [7507 kB] Fetched 7507 kB in 0s (115 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ibxg1gi/libz3-4_4.13.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-exec arm64 0.30+b1 [25.8 kB] Fetched 25.8 kB in 0s (1944 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmidm3aoo/dh-exec_0.30+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 hdf5-helpers arm64 1.14.5+repack-4 [26.7 kB] Fetched 26.7 kB in 0s (2537 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbne1epks/hdf5-helpers_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xz-utils arm64 5.8.1-2 [657 kB] Fetched 657 kB in 0s (46.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppgkfm_1g/xz-utils_5.8.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxau6 arm64 1:1.0.11-1 [20.6 kB] Fetched 20.6 kB in 0s (2055 kB/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpes640ws0/libxau6_1.0.11-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13-dev arm64 3.13.9-1 [504 kB] Fetched 504 kB in 0s (30.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp818omhno/python3.13-dev_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Fetched 103 kB in 0s (7061 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmplb41uf2m/libmagic1t64_5.46-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libicu76 arm64 76.1-4 [9524 kB] Fetched 9524 kB in 0s (126 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkb48936l/libicu76_76.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Fetched 1453 kB in 0s (81.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1wveck5/man-db_2.13.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sphinx-rtd-theme-common all 3.0.2+dfsg-3 [1023 kB] Fetched 1023 kB in 0s (52.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoon9p8x_/sphinx-rtd-theme-common_3.0.2+dfsg-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 automake all 1:1.18.1-2 [877 kB] Fetched 877 kB in 0s (65.6 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-2_all.deb' to '/srv/rebuilderd/tmp/tmpq7cswqif/automake_1.18.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libperl5.40 arm64 5.40.1-6 [4142 kB] Fetched 4142 kB in 0s (136 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ik8ojkk/libperl5.40_5.40.1-6_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libcrypt-dev arm64 1:4.4.38-1 [123 kB] Fetched 123 kB in 0s (6504 kB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.4.38-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp47yfeogn/libcrypt-dev_4.4.38-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tzdata all 2025b-5 [260 kB] Fetched 260 kB in 0s (17.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzpdkoav9/tzdata_2025b-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Fetched 1130 kB in 0s (52.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3e_3i5ju/groff-base_1.23.0-9_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libibverbs1 arm64 56.1-1+b1 [59.8 kB] Fetched 59.8 kB in 0s (2608 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpve6a5852/libibverbs1_56.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 procps arm64 2:4.0.4-9 [871 kB] Fetched 871 kB in 0s (64.2 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9_arm64.deb' to '/srv/rebuilderd/tmp/tmpey5qrr2e/procps_4.0.4-9_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnetcdf22 arm64 1:4.9.3-1+b1 [480 kB] Fetched 480 kB in 0s (20.0 MB/s) dpkg-name: info: moved 'libnetcdf22_1%3a4.9.3-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpee7trhqd/libnetcdf22_4.9.3-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 at-spi2-common all 2.58.1-1 [173 kB] Fetched 173 kB in 0s (11.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp728p0f00/at-spi2-common_2.58.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpcre2-32-0 arm64 10.46-1 [238 kB] Fetched 238 kB in 0s (12.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2oca9mjk/libpcre2-32-0_10.46-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 8276 B in 0s (745 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphd8grbgf/python3-jaraco.context_6.0.1-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Fetched 308 kB in 0s (14.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfa7gjocn/libkrb5-3_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libdebconfclient0 arm64 0.280 [10.8 kB] Fetched 10.8 kB in 0s (746 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpavpcq632/libdebconfclient0_0.280_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libxxf86vm1 arm64 1:1.1.4-1+b4 [19.2 kB] Fetched 19.2 kB in 0s (1833 kB/s) dpkg-name: info: moved 'libxxf86vm1_1%3a1.1.4-1+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmp85lia11g/libxxf86vm1_1.1.4-1+b4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5printsupport5t64 arm64 5.15.17+dfsg-4 [198 kB] Fetched 198 kB in 0s (15.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7t42pgh2/libqt5printsupport5t64_5.15.17+dfsg-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-cairo arm64 1.27.0-2 [114 kB] Fetched 114 kB in 0s (6967 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl4830qir/python3-cairo_1.27.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pil.imagetk arm64 12.0.0-1 [81.2 kB] Fetched 81.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoupwqrft/python3-pil.imagetk_12.0.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libevent-pthreads-2.1-7t64 arm64 2.1.12-stable-10+b1 [54.4 kB] Fetched 54.4 kB in 0s (2719 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9hcvgusw/libevent-pthreads-2.1-7t64_2.1.12-stable-10+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmount1 arm64 2.41.2-4 [199 kB] Fetched 199 kB in 0s (18.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0f9sx43c/libmount1_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Fetched 453 kB in 0s (38.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpta9_orjl/libunistring5_1.3-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfftw3-long3 arm64 3.3.10-2+b1 [546 kB] Fetched 546 kB in 0s (31.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzowb0gip/libfftw3-long3_3.3.10-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libhsa-runtime64-1 arm64 6.1.2-3 [302 kB] Fetched 302 kB in 0s (24.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf81ng8z7/libhsa-runtime64-1_6.1.2-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++ arm64 4:15.2.0-4 [1332 B] Fetched 1332 B in 0s (0 B/s) dpkg-name: info: moved 'g++_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpj0_ihxjg/g++_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-lxml arm64 6.0.2-1 [1260 kB] Fetched 1260 kB in 0s (52.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpybwg6yvv/python3-lxml_6.0.2-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-h5py all 3.14.0-3 [18.3 kB] Fetched 18.3 kB in 0s (876 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl5bxjnx3/python3-h5py_3.14.0-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 perl arm64 5.40.1-6 [267 kB] Fetched 267 kB in 0s (21.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplc6pbtso/perl_5.40.1-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libevent-core-2.1-7t64 arm64 2.1.12-stable-10+b1 [126 kB] Fetched 126 kB in 0s (8631 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptcyy2nci/libevent-core-2.1-7t64_2.1.12-stable-10+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-packaging all 25.0-1 [56.6 kB] Fetched 56.6 kB in 0s (2761 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3gc2j4sr/python3-packaging_25.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-thread-dev arm64 1.83.0.2+b2 [3616 B] Fetched 3616 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpof6_dh3r/libboost-thread-dev_1.83.0.2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-fortran-310 arm64 1.14.5+repack-4 [44.5 kB] Fetched 44.5 kB in 0s (3195 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph_e8lgm_/libhdf5-hl-fortran-310_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxfixes3 arm64 1:6.0.0-2+b4 [20.5 kB] Fetched 20.5 kB in 0s (1136 kB/s) dpkg-name: info: moved 'libxfixes3_1%3a6.0.0-2+b4_arm64.deb' to '/srv/rebuilderd/tmp/tmp3gzkozmz/libxfixes3_6.0.0-2+b4_arm64.deb' Downloading dependency 130 of 641: libxcb-dri3-0:arm64=1.17.0-2+b1 Downloading dependency 131 of 641: libmagic-mgc:arm64=1:5.46-5 Downloading dependency 132 of 641: libgraphite2-3:arm64=1.3.14-11 Downloading dependency 133 of 641: libucx0:arm64=1.19.0+ds-1 Downloading dependency 134 of 641: python3-ordered-set:arm64=4.1.0-1 Downloading dependency 135 of 641: netbase:arm64=6.5 Downloading dependency 136 of 641: python3-minimal:arm64=3.13.7-1 Downloading dependency 137 of 641: libboost-chrono1.83-dev:arm64=1.83.0-5 Downloading dependency 138 of 641: g++-15-aarch64-linux-gnu:arm64=15.2.0-7 Downloading dependency 139 of 641: libisl23:arm64=0.27-1 Downloading dependency 140 of 641: krb5-multidev:arm64=1.21.3-5 Downloading dependency 141 of 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zlib1g:arm64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 157 of 641: libhdf5-310:arm64=1.14.5+repack-4 Downloading dependency 158 of 641: python3-pymol:arm64=3.1.0+dfsg-1+b1 Downloading dependency 159 of 641: python3-pyqt5.sip:arm64=12.17.1-1 Downloading dependency 160 of 641: libdebhelper-perl:arm64=13.28 Downloading dependency 161 of 641: libglu1-mesa:arm64=9.0.2-1.1+b3 Downloading dependency 162 of 641: python3-jaraco.functools:arm64=4.1.0-1 Downloading dependency 163 of 641: libgmpxx4ldbl:arm64=2:6.3.0+dfsg-5 Downloading dependency 164 of 641: libwayland-cursor0:arm64=1.24.0-2+b1 Downloading dependency 165 of 641: libxcomposite1:arm64=1:0.4.6-1 Downloading dependency 166 of 641: libbz2-1.0:arm64=1.0.8-6 Downloading dependency 167 of 641: python3-requests:arm64=2.32.5+dfsg-1 Downloading dependency 168 of 641: libxext6:arm64=2:1.3.4-1+b3 Downloading dependency 169 of 641: hostname:arm64=3.25 Downloading dependency 170 of 641: libgl1-mesa-dri:arm64=25.2.5-1 Downloading dependency 171 of 641: libnuma1:arm64=2.0.19-1 Downloading dependency 172 of 641: dh-python:arm64=6.20250414 Downloading dependency 173 of 641: libnotify4:arm64=0.8.6-2 Downloading dependency 174 of 641: libibmad5:arm64=56.1-1+b1 Downloading dependency 175 of 641: libngtcp2-crypto-ossl0:arm64=1.16.0-1 Downloading dependency 176 of 641: libattr1:arm64=1:2.5.2-3 Downloading dependency 177 of 641: dwz:arm64=0.16-2 Downloading dependency 178 of 641: python3-all-dev:arm64=3.13.7-1 Downloading dependency 179 of 641: libboost-thread1.83.0:arm64=1.83.0-5 Downloading dependency 180 of 641: libcurl4t64:arm64=8.17.0~rc2-1 Downloading dependency 181 of 641: libwebp-dev:arm64=1.5.0-0.1 Downloading dependency 182 of 641: python3-freetype:arm64=2.5.1-2 Downloading dependency 183 of 641: fftw2:arm64=2.1.5-7+b1 Downloading dependency 184 of 641: python3-pluggy:arm64=1.6.0-1 Downloading dependency 185 of 641: python3-platformdirs:arm64=4.4.0-1 Downloading dependency 186 of 641: libgomp1:arm64=15.2.0-7 Downloading dependency 187 of 641: python3.13-tk:arm64=3.13.9-1 Downloading dependency 188 of 641: libqt5network5t64:arm64=5.15.17+dfsg-4 Downloading dependency 189 of 641: patch:arm64=2.8-2 Downloading dependency 190 of 641: python3-fonttools:arm64=4.57.0-2 Downloading dependency 191 of 641: libxshmfence1:arm64=1.3.3-1 Downloading dependency 192 of 641: python3-pygments:arm64=2.18.0+dfsg-2 Downloading dependency 193 of 641: libx11-dev:arm64=2:1.8.12-1 Downloading dependency 194 of 641: python3-pyqt5.qtopengl:arm64=5.15.11+dfsg-3 Downloading dependency 195 of 641: libpcre2-8-0:arm64=10.46-1 Downloading dependency 196 of 641: libimagequant0:arm64=4.4.0-3 Downloading dependency 197 of 641: libsasl2-modules-db:arm64=2.1.28+dfsg1-10 Downloading dependency 198 of 641: libeigen3-dev:arm64=3.4.0-5 Downloading dependency 199 of 641: ca-certificates:arm64=20250419 Downloading dependency 200 of 641: libpython3.13:arm64=3.13.9-1 Downloading dependency 201 of 641: libopenjp2-7:arm64=2.5.3-2.1 Downloading dependency 202 of 641: libyuv0:arm64=0.0.1919.20250919-1 Downloading dependency 203 of 641: python3-pyqt5:arm64=5.15.11+dfsg-3 Downloading dependency 204 of 641: python3-flexcache:arm64=0.3-2 Downloading dependency 205 of 641: libglx0:arm64=1.7.0-1+b2 Downloading dependency 206 of 641: libkeyutils1:arm64=1.6.3-6 Downloading dependency 207 of 641: libdouble-conversion3:arm64=3.3.1-2 Downloading dependency 208 of 641: login.defs:arm64=1:4.18.0-2 Downloading dependency 209 of 641: libcurl4-openssl-dev:arm64=8.17.0~rc2-1 Downloading dependency 210 of 641: python3-six:arm64=1.17.0-1 Downloading dependency 211 of 641: libqt5opengl5t64:arm64=5.15.17+dfsg-4 Downloading dependency 212 of 641: libboost-system1.83-dev:arm64=1.83.0-5 Downloading dependency 213 of 641: libz3-4:arm64=4.13.3-1 Downloading dependency 214 of 641: dh-exec:arm64=0.30+b1 Downloading dependency 215 of 641: hdf5-helpers:arm64=1.14.5+repack-4 Downloading dependency 216 of 641: xz-utils:arm64=5.8.1-2 Downloading dependency 217 of 641: libxau6:arm64=1:1.0.11-1 Downloading dependency 218 of 641: python3.13-dev:arm64=3.13.9-1 Downloading dependency 219 of 641: libmagic1t64:arm64=1:5.46-5 Downloading dependency 220 of 641: libicu76:arm64=76.1-4 Downloading dependency 221 of 641: man-db:arm64=2.13.1-1 Downloading dependency 222 of 641: sphinx-rtd-theme-common:arm64=3.0.2+dfsg-3 Downloading dependency 223 of 641: automake:arm64=1:1.18.1-2 Downloading dependency 224 of 641: libperl5.40:arm64=5.40.1-6 Downloading dependency 225 of 641: libcrypt-dev:arm64=1:4.4.38-1 Downloading dependency 226 of 641: tzdata:arm64=2025b-5 Downloading dependency 227 of 641: groff-base:arm64=1.23.0-9 Downloading dependency 228 of 641: libibverbs1:arm64=56.1-1+b1 Downloading dependency 229 of 641: procps:arm64=2:4.0.4-9 Downloading dependency 230 of 641: libnetcdf22:arm64=1:4.9.3-1+b1 Downloading dependency 231 of 641: at-spi2-common:arm64=2.58.1-1 Downloading dependency 232 of 641: libpcre2-32-0:arm64=10.46-1 Downloading dependency 233 of 641: python3-jaraco.context:arm64=6.0.1-1 Downloading dependency 234 of 641: libkrb5-3:arm64=1.21.3-5 Downloading dependency 235 of 641: libdebconfclient0:arm64=0.280 Downloading dependency 236 of 641: libxxf86vm1:arm64=1:1.1.4-1+b4 Downloading dependency 237 of 641: libqt5printsupport5t64:arm64=5.15.17+dfsg-4 Downloading dependency 238 of 641: python3-cairo:arm64=1.27.0-2 Downloading dependency 239 of 641: python3-pil.imagetk:arm64=12.0.0-1 Downloading dependency 240 of 641: libevent-pthreads-2.1-7t64:arm64=2.1.12-stable-10+b1 Downloading dependency 241 of 641: libmount1:arm64=2.41.2-4 Downloading dependency 242 of 641: libunistring5:arm64=1.3-2 Downloading dependency 243 of 641: libfftw3-long3:arm64=3.3.10-2+b1 Downloading dependency 244 of 641: libhsa-runtime64-1:arm64=6.1.2-3 Downloading dependency 245 of 641: g++:arm64=4:15.2.0-4 Downloading dependency 246 of 641: python3-lxml:arm64=6.0.2-1 Downloading dependency 247 of 641: python3-h5py:arm64=3.14.0-3 Downloading dependency 248 of 641: perl:arm64=5.40.1-6 Downloading dependency 249 of 641: libevent-core-2.1-7t64:arm64=2.1.12-stable-10+b1 Downloading dependency 250 of 641: python3-packaging:arm64=25.0-1 Downloading dependency 251 of 641: libboost-thread-dev:arm64=1.83.0.2+b2 Downloading dependency 252 of 641: libhdf5-hl-fortran-310:arm64=1.14.5+repack-4 Downloading dependency 253 of 641: libxfixes3:arm64=1:6.0.0-2+b4 Downloading dependency 254 of 641: libnettle8t64:arm64=3.10.2-1Get:1 http://deb.debian.org/debian unstable/main arm64 libnettle8t64 arm64 3.10.2-1 [305 kB] Fetched 305 kB in 0s (21.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc3wd1yyo/libnettle8t64_3.10.2-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libkadm5clnt-mit12 arm64 1.21.3-5 [41.1 kB] Fetched 41.1 kB in 0s (2632 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjq4yhjlf/libkadm5clnt-mit12_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-sympy all 1.14.0-2 [4228 kB] Fetched 4228 kB in 0s (99.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp3koxexi/python3-sympy_1.14.0-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcbf-dev arm64 0.9.7+dfsg1-5.1 [442 kB] Fetched 442 kB in 0s (23.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq0jumkcc/libcbf-dev_0.9.7+dfsg1-5.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfreetype6 arm64 2.13.3+dfsg-1 [422 kB] Fetched 422 kB in 0s (24.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6thahkzw/libfreetype6_2.13.3+dfsg-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 ncurses-bin arm64 6.5+20250216-2 [432 kB] Fetched 432 kB in 0s (34.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7n2m3jue/ncurses-bin_6.5+20250216-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf-2.0-0 arm64 2.44.4+dfsg-1 [133 kB] Fetched 133 kB in 0s (11.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9r8lhqfu/libgdk-pixbuf-2.0-0_2.44.4+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Fetched 13.6 kB in 0s (912 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppk1s75g7/python3-autocommand_2.2.2-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-14-base arm64 14.3.0-10 [52.4 kB] Fetched 52.4 kB in 0s (2815 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiwbwhzbw/gcc-14-base_14.3.0-10_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-reportlab all 4.4.4-2 [1170 kB] Fetched 1170 kB in 0s (68.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4wehx7nl/python3-reportlab_4.4.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcbf1t64 arm64 0.9.7+dfsg1-5.1 [338 kB] Fetched 338 kB in 0s (15.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkl0gocx6/libcbf1t64_0.9.7+dfsg1-5.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-opengl all 3.1.10+dfsg-1 [624 kB] Fetched 624 kB in 0s (23.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuagy54hr/python3-opengl_3.1.10+dfsg-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-h5py-serial arm64 3.14.0-3 [972 kB] Fetched 972 kB in 0s (60.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1w2jvv7s/python3-h5py-serial_3.14.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB] Fetched 60.5 kB in 0s (5790 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6xeh9z48/rpcsvc-proto_1.4.3-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-hdf5plugin all 5.1.0-1 [27.1 kB] Fetched 27.1 kB in 0s (1133 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7hxosjhm/python3-hdf5plugin_5.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsemanage2 arm64 3.9-1 [86.7 kB] Fetched 86.7 kB in 0s (5333 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph3cdhj9y/libsemanage2_3.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libabsl20240722 arm64 20240722.0-4 [452 kB] Fetched 452 kB in 0s (26.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpehtop_9a/libabsl20240722_20240722.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libpmix2t64 arm64 6.0.0+really5.0.8-1 [574 kB] Fetched 574 kB in 0s (26.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1hs4f8qm/libpmix2t64_6.0.0+really5.0.8-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Fetched 517 kB in 0s (31.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8f9yxtzn/fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (24.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnmjk_pfx/autoconf_2.72-3.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libidn2-0 arm64 2.3.8-4 [108 kB] Fetched 108 kB in 0s (6111 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsxwj89m3/libidn2-0_2.3.8-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssl-dev arm64 3.5.4-1 [3377 kB] Fetched 3377 kB in 0s (108 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6zpmh_op/libssl-dev_3.5.4-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libegl-mesa0 arm64 25.2.5-1 [114 kB] Fetched 114 kB in 0s (5929 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps9pyemow/libegl-mesa0_25.2.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost1.83-dev arm64 1.83.0-5 [10.6 MB] Fetched 10.6 MB in 0s (60.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgfkfbnd3/libboost1.83-dev_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpango-1.0-0 arm64 1.56.3-2 [222 kB] Fetched 222 kB in 0s (8428 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8zrfojkt/libpango-1.0-0_1.56.3-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libitm1 arm64 15.2.0-7 [24.2 kB] Fetched 24.2 kB in 0s (1119 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2p0602dl/libitm1_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-image0 arm64 0.4.0-2+b2 [21.9 kB] Fetched 21.9 kB in 0s (1264 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3rp8ps9j/libxcb-image0_0.4.0-2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam0g arm64 1.7.0-5 [68.8 kB] Fetched 68.8 kB in 0s (6633 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1onfj_t1/libpam0g_1.7.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libkadm5srv-mit12 arm64 1.21.3-5 [53.0 kB] Fetched 53.0 kB in 0s (2914 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpby47kazj/libkadm5srv-mit12_1.21.3-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 liblz4-dev arm64 1.10.0-4 [85.1 kB] Fetched 85.1 kB in 0s (7378 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphrg4y011/liblz4-dev_1.10.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libaom3 arm64 3.13.1-1 [1631 kB] Fetched 1631 kB in 0s (60.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsx1wcm12/libaom3_3.13.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-sync1 arm64 1.17.0-2+b1 [109 kB] Fetched 109 kB in 0s (6452 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwh6dg2q0/libxcb-sync1_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssm-dev arm64 1.4.0-2+b3 [15.2 kB] Fetched 15.2 kB in 0s (1202 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp98j3qwmn/libssm-dev_1.4.0-2+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcap2 arm64 1:2.75-10+b1 [28.2 kB] Fetched 28.2 kB in 0s (2445 kB/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmp1ovonuyy/libcap2_2.75-10+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-render-util0 arm64 0.3.10-1 [18.5 kB] Fetched 18.5 kB in 0s (1726 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg20sg7dd/libxcb-render-util0_0.3.10-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 openssl-provider-legacy arm64 3.5.4-1 [306 kB] Fetched 306 kB in 0s (19.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt5oggxkh/openssl-provider-legacy_3.5.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libepoxy0 arm64 1.5.10-2 [200 kB] Fetched 200 kB in 0s (13.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjjoc9le8/libepoxy0_1.5.10-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglew2.2 arm64 2.2.0-4+b2 [162 kB] Fetched 162 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvnji85lf/libglew2.2_2.2.0-4+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsensors-config all 1:3.6.2-2 [16.2 kB] Fetched 16.2 kB in 0s (1253 kB/s) dpkg-name: info: moved 'libsensors-config_1%3a3.6.2-2_all.deb' to '/srv/rebuilderd/tmp/tmpx3h2woap/libsensors-config_3.6.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xml-core all 0.19 [20.1 kB] Fetched 20.1 kB in 0s (1119 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc9pgt96l/xml-core_0.19_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 make arm64 4.4.1-2 [452 kB] Fetched 452 kB in 0s (24.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_age8wgw/make_4.4.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-dateutil all 2.9.0-4 [79.4 kB] Fetched 79.4 kB in 0s (3623 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxklnnrcc/python3-dateutil_2.9.0-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Fetched 248 kB in 0s (17.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo_a4ad2u/po-debconf_1.0.21+nmu1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libubsan1 arm64 15.2.0-7 [1064 kB] Fetched 1064 kB in 0s (44.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplfbo7bvv/libubsan1_15.2.0-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libdatrie1 arm64 0.2.13-4 [37.4 kB] Fetched 37.4 kB in 0s (3117 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5aa143no/libdatrie1_0.2.13-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libedit2 arm64 3.1-20250104-1 [89.3 kB] Fetched 89.3 kB in 0s (5434 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl6abfwl1/libedit2_3.1-20250104-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.4-1 [37.1 kB] Fetched 37.1 kB in 0s (2177 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqxbi5wyx/python3-typeguard_4.4.4-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libcrypt1 arm64 1:4.4.38-1 [91.8 kB] Fetched 91.8 kB in 0s (8478 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.4.38-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpae0biyt6/libcrypt1_4.4.38-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5test5t64 arm64 5.15.17+dfsg-4 [140 kB] Fetched 140 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpovw1vear/libqt5test5t64_5.15.17+dfsg-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaec-dev arm64 1.1.4-2 [20.3 kB] Fetched 20.3 kB in 0s (1713 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkbtx39a9/libaec-dev_1.1.4-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmd0 arm64 1.1.0-2+b1 [33.7 kB] Fetched 33.7 kB in 0s (2636 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt89_8njq/libmd0_1.1.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmmdb2-dev arm64 2.0.22-1+b2 [92.9 kB] Fetched 92.9 kB in 0s (5087 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp92wda0zp/libmmdb2-dev_2.0.22-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzstd1 arm64 1.5.7+dfsg-2 [260 kB] Fetched 260 kB in 0s (18.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv5bncn1j/libzstd1_1.5.7+dfsg-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsensors5 arm64 1:3.6.2-2 [36.4 kB] Fetched 36.4 kB in 0s (1911 kB/s) dpkg-name: info: moved 'libsensors5_1%3a3.6.2-2_arm64.deb' to '/srv/rebuilderd/tmp/tmpk2s7720u/libsensors5_3.6.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdrm2 arm64 2.4.127-1 [38.3 kB] Fetched 38.3 kB in 0s (2984 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjsq44vbv/libdrm2_2.4.127-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libatspi2.0-0t64 arm64 2.58.1-1 [76.7 kB] Fetched 76.7 kB in 0s (2954 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjxcrzp8e/libatspi2.0-0t64_2.58.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Fetched 81.2 kB in 0s (4146 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwnno23jw/libk5crypto3_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gzip arm64 1.13-1 [135 kB] Fetched 135 kB in 0s (5739 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxbwl6ae5/gzip_1.13-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsqlite3-0 arm64 3.46.1-8 [884 kB] Fetched 884 kB in 0s (38.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu4bkygmi/libsqlite3-0_3.46.1-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsz2 arm64 1.1.4-2 [8072 B] Fetched 8072 B in 0s (491 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxjc50h96/libsz2_1.1.4-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libbinutils arm64 2.45-8 [677 kB] Fetched 677 kB in 0s (30.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ih_d1ch/libbinutils_2.45-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 scons all 4.8.1+dfsg-1 [548 kB] Fetched 548 kB in 0s (39.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp59_mgmab/scons_4.8.1+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-timer-dev arm64 1.83.0.2+b2 [3712 B] Fetched 3712 B in 0s (167 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppjlm7h_l/libboost-timer-dev_1.83.0.2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-lz4 arm64 4.4.4+dfsg-3 [25.5 kB] Fetched 25.5 kB in 0s (2347 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjsnhar1d/python3-lz4_4.4.4+dfsg-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libxml2-16 arm64 2.15.1+dfsg-0.2 [591 kB] Fetched 591 kB in 0s (44.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvod2ecu2/libxml2-16_2.15.1+dfsg-0.2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 binutils-aarch64-linux-gnu arm64 2.45-8 [847 kB] Fetched 847 kB in 0s (47.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprn98n194/binutils-aarch64-linux-gnu_2.45-8_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 rsync arm64 3.4.1+ds1-6 [405 kB] Fetched 405 kB in 0s (19.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2qcli8si/rsync_3.4.1+ds1-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 adduser all 3.153 [191 kB] Fetched 191 kB in 0s (11.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnz5bgar1/adduser_3.153_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libantlr3c-dev arm64 3.4+dfsg-4+b2 [131 kB] Fetched 131 kB in 0s (7115 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprsrmbubz/libantlr3c-dev_3.4+dfsg-4+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libglx-mesa0 arm64 25.2.5-1 [108 kB] Fetched 108 kB in 0s (5953 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpune063d5/libglx-mesa0_25.2.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmunge2 arm64 0.5.16-1 [19.2 kB] Fetched 19.2 kB in 0s (1091 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5hkz5o74/libmunge2_0.5.16-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 librdmacm1t64 arm64 56.1-1+b1 [67.9 kB] Fetched 67.9 kB in 0s (5029 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphc6fk5co/librdmacm1t64_56.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwacom9 arm64 2.16.1-1 [25.6 kB] Fetched 25.6 kB in 0s (1378 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv5cr0py6/libwacom9_2.16.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (7830 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt8cxe6l_/debconf_1.5.91_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfftw3-bin arm64 3.3.10-2+b1 [44.3 kB] Fetched 44.3 kB in 0s (3635 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq79yabq2/libfftw3-bin_3.3.10-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxxhash0 arm64 0.8.3-2 [22.3 kB] Fetched 22.3 kB in 0s (1624 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0jome_jh/libxxhash0_0.8.3-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sfftw-dev arm64 2.1.5-7+b1 [244 kB] Fetched 244 kB in 0s (21.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpldx8filf/sfftw-dev_2.1.5-7+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libudev1 arm64 258.1-1 [147 kB] Fetched 147 kB in 0s (9362 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq29ungii/libudev1_258.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpangocairo-1.0-0 arm64 1.56.3-2 [35.3 kB] Fetched 35.3 kB in 0s (2088 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvlbf2c9_/libpangocairo-1.0-0_1.56.3-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtiff-dev arm64 4.7.1-1 [481 kB] Fetched 481 kB in 0s (41.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6v5av06n/libtiff-dev_4.7.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-dev arm64 1.16.0-1 [183 kB] Fetched 183 kB in 0s (13.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp856fgkfb/libngtcp2-dev_1.16.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-procrunner all 2.3.3-2 [13.9 kB] Fetched 13.9 kB in 0s (922 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6fqpm456/python3-procrunner_2.3.3-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp3-9 arm64 1.12.0-1 [63.6 kB] Fetched 63.6 kB in 0s (5399 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq5w8qj9j/libnghttp3-9_1.12.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libegl1 arm64 1.7.0-1+b2 [34.0 kB] Fetched 34.0 kB in 0s (2023 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphkdeqrsc/libegl1_1.7.0-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (1204 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqs_4xwqi/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb1-dev arm64 1.17.0-2+b1 [182 kB] Fetched 182 kB in 0s (11.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnsoz4r2n/libxcb1-dev_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-atomic1.83.0 arm64 1.83.0-5 [234 kB] Fetched 234 kB in 0s (19.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9bako9b1/libboost-atomic1.83.0_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-keysyms1 arm64 0.4.1-1 [16.8 kB] Fetched 16.8 kB in 0s (523 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpowj7yhr9/libxcb-keysyms1_0.4.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 nettle-dev arm64 3.10.2-1 [1319 kB] Fetched 1319 kB in 0s (65.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgwjz5usy/nettle-dev_3.10.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjbig-dev arm64 2.1-6.1+b2 [30.5 kB] Fetched 30.5 kB in 0s (2338 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbyvcirw0/libjbig-dev_2.1-6.1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 systemd arm64 258.1-1 [3027 kB] Fetched 3027 kB in 0s (106 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvt4_2f4r/systemd_258.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xfixes0 arm64 1.17.0-2+b1 [110 kB] Fetched 110 kB in 0s (8525 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc1boc95s/libxcb-xfixes0_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsmartcols1 arm64 2.41.2-4 [139 kB] Fetched 139 kB in 0s (8972 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph35my93l/libsmartcols1_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 passwd arm64 1:4.18.0-2 [1261 kB] Fetched 1261 kB in 0s (20.6 MB/s) dpkg-name: info: moved 'passwd_1%3a4.18.0-2_arm64.deb' to '/srv/rebuilderd/tmp/tmp8fk95krw/passwd_4.18.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg arm64 1.22.21 [1521 kB] Fetched 1521 kB in 0s (76.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp257r3rqs/dpkg_1.22.21_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc arm64 4:15.2.0-4 [5156 B] Fetched 5156 B in 0s (0 B/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmp7_gs6vk6/gcc_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-date-time1.83.0 arm64 1.83.0-5 [231 kB] Fetched 231 kB in 0s (15.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5q5cjoyi/libboost-date-time1.83.0_1.83.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libsystemd0 arm64 258.1-1 [427 kB] Fetched 427 kB in 0s (36.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0fxgwnya/libsystemd0_258.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Fetched 92.4 kB in 0s (9139 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp47_3bvna/python3-typing-extensions_4.15.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libdav1d7 arm64 1.5.1-1 [252 kB] Fetched 252 kB in 0s (21.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb20mq7t3/libdav1d7_1.5.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libccp4-data all 8.0.0-5 [62.5 kB] Fetched 62.5 kB in 0s (5954 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbkch9dab/libccp4-data_8.0.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-lyx all 2.4.4-2 [190 kB] Fetched 190 kB in 0s (9383 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptxlqty56/fonts-lyx_2.4.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcairo2 arm64 1.18.4-1+b1 [483 kB] Fetched 483 kB in 0s (34.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1103gsmb/libcairo2_1.18.4-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 architecture-properties arm64 0.2.6 [2336 B] Fetched 2336 B in 0s (118 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpul_09ao8/architecture-properties_0.2.6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfuse3-4 arm64 3.17.4-1 [94.1 kB] Fetched 94.1 kB in 0s (8513 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsxoeelpr/libfuse3-4_3.17.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.1-7 [1846 kB] Fetched 1846 kB in 0s (73.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkirc26gy/liblapack3_3.12.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzstd-dev arm64 1.5.7+dfsg-2 [330 kB] Fetched 330 kB in 0s (24.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2w8k47yr/libzstd-dev_1.5.7+dfsg-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwacom-common all 2.16.1-1 [112 kB] Fetched 112 kB in 0s (4219 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwe6a_653/libwacom-common_2.16.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpcre2-16-0 arm64 10.46-1 [247 kB] Fetched 247 kB in 0s (16.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpovszf6yp/libpcre2-16-0_10.46-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libp11-kit0 arm64 0.25.9-2 [420 kB] Fetched 420 kB in 0s (34.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvnq9iz6g/libp11-kit0_0.25.9-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libxkbcommon0 arm64 1.7.0-2.1 [106 kB] Fetched 106 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr8_jjm89/libxkbcommon0_1.7.0-2.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dash arm64 0.5.12-12 [95.6 kB] Fetched 95.6 kB in 0s (8995 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk2em6luc/dash_0.5.12-12_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libqt5designer5 arm64 5.15.17-3 [2720 kB] Fetched 2720 kB in 0s (99.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpifna42lq/libqt5designer5_5.15.17-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-timer1.83-dev arm64 1.83.0-5 [237 kB] Fetched 237 kB in 0s (21.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp33_33lwv/libboost-timer1.83-dev_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblzma-dev arm64 5.8.1-2 [344 kB] Fetched 344 kB in 0s (29.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptpq6bfes/liblzma-dev_5.8.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfribidi0 arm64 1.0.16-3 [26.5 kB] Fetched 26.5 kB in 0s (1935 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1vyied9i/libfribidi0_1.0.16-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-7 [540 kB] Fetched 540 kB in 0s (41.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ufqsqni/libtool_2.5.4-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Fetched 69.0 kB in 0s (6137 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw6w6ag53/libuchardet0_0.0.8-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxrandr2 arm64 2:1.5.4-1+b3 [35.9 kB] Fetched 35.9 kB in 0s (0 B/s) dpkg-name: info: moved 'libxrandr2_2%3a1.5.4-1+b3_arm64.deb' to '/srv/rebuilderd/tmp/tmpyp_qu9u8/libxrandr2_1.5.4-1+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5xml5t64 arm64 5.15.17+dfsg-4 [120 kB] Fetched 120 kB in 0s (9728 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp90ywwncg/libqt5xml5t64_5.15.17+dfsg-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 pymol-data all 3.1.0+dfsg-1 [1430 kB] Fetched 1430 kB in 0s (73.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmfveo65t/pymol-data_3.1.0+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (1210 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphdbt92ch/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libinput10 arm64 1.28.1-1 [129 kB] Fetched 129 kB in 0s (8315 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmf424qh0/libinput10_1.28.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjs-jquery all 3.7.1+dfsg+~3.5.33-1 [319 kB] Fetched 319 kB in 0s (26.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqtswxtu4/libjs-jquery_3.7.1+dfsg+~3.5.33-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-numpy1.83-dev arm64 1.83.0-5 [246 kB] Fetched 246 kB in 0s (24.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl15v9yqb/libboost-numpy1.83-dev_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpfr6 arm64 4.2.2-2 [685 kB] Fetched 685 kB in 0s (32.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjyta7n7s/libmpfr6_4.2.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsharpyuv-dev arm64 1.5.0-0.1 [118 kB] Fetched 118 kB in 0s (9874 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp3g0ou2o/libsharpyuv-dev_1.5.0-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppq_scany/libarchive-zip-perl_1.68-1_all.deb' Downloading dependency 255 of 641: libkadm5clnt-mit12:arm64=1.21.3-5 Downloading dependency 256 of 641: python3-sympy:arm64=1.14.0-2 Downloading dependency 257 of 641: libcbf-dev:arm64=0.9.7+dfsg1-5.1 Downloading dependency 258 of 641: libfreetype6:arm64=2.13.3+dfsg-1 Downloading dependency 259 of 641: ncurses-bin:arm64=6.5+20250216-2 Downloading dependency 260 of 641: libgdk-pixbuf-2.0-0:arm64=2.44.4+dfsg-1 Downloading dependency 261 of 641: python3-autocommand:arm64=2.2.2-3 Downloading dependency 262 of 641: gcc-14-base:arm64=14.3.0-10 Downloading dependency 263 of 641: python3-reportlab:arm64=4.4.4-2 Downloading dependency 264 of 641: libcbf1t64:arm64=0.9.7+dfsg1-5.1 Downloading dependency 265 of 641: python3-opengl:arm64=3.1.10+dfsg-1 Downloading dependency 266 of 641: python3-h5py-serial:arm64=3.14.0-3 Downloading dependency 267 of 641: rpcsvc-proto:arm64=1.4.3-1+b1 Downloading dependency 268 of 641: python3-hdf5plugin:arm64=5.1.0-1 Downloading dependency 269 of 641: libsemanage2:arm64=3.9-1 Downloading dependency 270 of 641: libabsl20240722:arm64=20240722.0-4 Downloading dependency 271 of 641: libpmix2t64:arm64=6.0.0+really5.0.8-1 Downloading dependency 272 of 641: fonts-font-awesome:arm64=5.0.10+really4.7.0~dfsg-4.1 Downloading dependency 273 of 641: autoconf:arm64=2.72-3.1 Downloading dependency 274 of 641: libidn2-0:arm64=2.3.8-4 Downloading dependency 275 of 641: libssl-dev:arm64=3.5.4-1 Downloading dependency 276 of 641: libegl-mesa0:arm64=25.2.5-1 Downloading dependency 277 of 641: libboost1.83-dev:arm64=1.83.0-5 Downloading dependency 278 of 641: libpango-1.0-0:arm64=1.56.3-2 Downloading dependency 279 of 641: libitm1:arm64=15.2.0-7 Downloading dependency 280 of 641: libxcb-image0:arm64=0.4.0-2+b2 Downloading dependency 281 of 641: libpam0g:arm64=1.7.0-5 Downloading dependency 282 of 641: libkadm5srv-mit12:arm64=1.21.3-5 Downloading dependency 283 of 641: liblz4-dev:arm64=1.10.0-4 Downloading dependency 284 of 641: libaom3:arm64=3.13.1-1 Downloading dependency 285 of 641: libxcb-sync1:arm64=1.17.0-2+b1 Downloading dependency 286 of 641: libssm-dev:arm64=1.4.0-2+b3 Downloading dependency 287 of 641: libcap2:arm64=1:2.75-10+b1 Downloading dependency 288 of 641: libxcb-render-util0:arm64=0.3.10-1 Downloading dependency 289 of 641: openssl-provider-legacy:arm64=3.5.4-1 Downloading dependency 290 of 641: libepoxy0:arm64=1.5.10-2 Downloading dependency 291 of 641: libglew2.2:arm64=2.2.0-4+b2 Downloading dependency 292 of 641: libsensors-config:arm64=1:3.6.2-2 Downloading dependency 293 of 641: xml-core:arm64=0.19 Downloading dependency 294 of 641: make:arm64=4.4.1-2 Downloading dependency 295 of 641: python3-dateutil:arm64=2.9.0-4 Downloading dependency 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dependency 312 of 641: libsqlite3-0:arm64=3.46.1-8 Downloading dependency 313 of 641: libsz2:arm64=1.1.4-2 Downloading dependency 314 of 641: libbinutils:arm64=2.45-8 Downloading dependency 315 of 641: scons:arm64=4.8.1+dfsg-1 Downloading dependency 316 of 641: libboost-timer-dev:arm64=1.83.0.2+b2 Downloading dependency 317 of 641: python3-lz4:arm64=4.4.4+dfsg-3 Downloading dependency 318 of 641: libxml2-16:arm64=2.15.1+dfsg-0.2 Downloading dependency 319 of 641: binutils-aarch64-linux-gnu:arm64=2.45-8 Downloading dependency 320 of 641: rsync:arm64=3.4.1+ds1-6 Downloading dependency 321 of 641: adduser:arm64=3.153 Downloading dependency 322 of 641: libantlr3c-dev:arm64=3.4+dfsg-4+b2 Downloading dependency 323 of 641: libglx-mesa0:arm64=25.2.5-1 Downloading dependency 324 of 641: libmunge2:arm64=0.5.16-1 Downloading dependency 325 of 641: librdmacm1t64:arm64=56.1-1+b1 Downloading dependency 326 of 641: libwacom9:arm64=2.16.1-1 Downloading dependency 327 of 641: debconf:arm64=1.5.91 Downloading dependency 328 of 641: libfftw3-bin:arm64=3.3.10-2+b1 Downloading dependency 329 of 641: libxxhash0:arm64=0.8.3-2 Downloading dependency 330 of 641: sfftw-dev:arm64=2.1.5-7+b1 Downloading dependency 331 of 641: libudev1:arm64=258.1-1 Downloading dependency 332 of 641: libpangocairo-1.0-0:arm64=1.56.3-2 Downloading dependency 333 of 641: libtiff-dev:arm64=4.7.1-1 Downloading dependency 334 of 641: libngtcp2-dev:arm64=1.16.0-1 Downloading dependency 335 of 641: python3-procrunner:arm64=2.3.3-2 Downloading dependency 336 of 641: libnghttp3-9:arm64=1.12.0-1 Downloading dependency 337 of 641: libegl1:arm64=1.7.0-1+b2 Downloading dependency 338 of 641: init-system-helpers:arm64=1.69 Downloading dependency 339 of 641: libxcb1-dev:arm64=1.17.0-2+b1 Downloading dependency 340 of 641: libboost-atomic1.83.0:arm64=1.83.0-5 Downloading dependency 341 of 641: libxcb-keysyms1:arm64=0.4.1-1 Downloading dependency 342 of 641: nettle-dev:arm64=3.10.2-1 Downloading dependency 343 of 641: libjbig-dev:arm64=2.1-6.1+b2 Downloading dependency 344 of 641: systemd:arm64=258.1-1 Downloading dependency 345 of 641: libxcb-xfixes0:arm64=1.17.0-2+b1 Downloading dependency 346 of 641: libsmartcols1:arm64=2.41.2-4 Downloading dependency 347 of 641: passwd:arm64=1:4.18.0-2 Downloading dependency 348 of 641: dpkg:arm64=1.22.21 Downloading dependency 349 of 641: gcc:arm64=4:15.2.0-4 Downloading dependency 350 of 641: libboost-date-time1.83.0:arm64=1.83.0-5 Downloading dependency 351 of 641: libsystemd0:arm64=258.1-1 Downloading dependency 352 of 641: python3-typing-extensions:arm64=4.15.0-1 Downloading dependency 353 of 641: libdav1d7:arm64=1.5.1-1 Downloading dependency 354 of 641: libccp4-data:arm64=8.0.0-5 Downloading dependency 355 of 641: fonts-lyx:arm64=2.4.4-2 Downloading dependency 356 of 641: libcairo2:arm64=1.18.4-1+b1 Downloading dependency 357 of 641: architecture-properties:arm64=0.2.6 Downloading dependency 358 of 641: libfuse3-4:arm64=3.17.4-1 Downloading dependency 359 of 641: liblapack3:arm64=3.12.1-7 Downloading dependency 360 of 641: libzstd-dev:arm64=1.5.7+dfsg-2 Downloading dependency 361 of 641: libwacom-common:arm64=2.16.1-1 Downloading dependency 362 of 641: libpcre2-16-0:arm64=10.46-1 Downloading dependency 363 of 641: libp11-kit0:arm64=0.25.9-2 Downloading dependency 364 of 641: libxkbcommon0:arm64=1.7.0-2.1 Downloading dependency 365 of 641: dash:arm64=0.5.12-12 Downloading dependency 366 of 641: libqt5designer5:arm64=5.15.17-3 Downloading dependency 367 of 641: libboost-timer1.83-dev:arm64=1.83.0-5 Downloading dependency 368 of 641: liblzma-dev:arm64=5.8.1-2 Downloading dependency 369 of 641: libfribidi0:arm64=1.0.16-3 Downloading dependency 370 of 641: libtool:arm64=2.5.4-7 Downloading dependency 371 of 641: libuchardet0:arm64=0.0.8-2 Downloading dependency 372 of 641: libxrandr2:arm64=2:1.5.4-1+b3 Downloading dependency 373 of 641: libqt5xml5t64:arm64=5.15.17+dfsg-4 Downloading dependency 374 of 641: pymol-data:arm64=3.1.0+dfsg-1 Downloading dependency 375 of 641: intltool-debian:arm64=0.35.0+20060710.6 Downloading dependency 376 of 641: libinput10:arm64=1.28.1-1 Downloading dependency 377 of 641: libjs-jquery:arm64=3.7.1+dfsg+~3.5.33-1 Downloading dependency 378 of 641: libboost-numpy1.83-dev:arm64=1.83.0-5 Downloading dependency 379 of 641: libmpfr6:arm64=4.2.2-2 Downloading dependency 380 of 641: libsharpyuv-dev:arm64=1.5.0-0.1 Downloading dependency 381 of 641: libarchive-zip-perl:arm64=1.68-1 Downloading dependency 382 of 641: libclipper2:arm64=2.1.20201109-2+b3Get:1 http://deb.debian.org/debian unstable/main arm64 libclipper2 arm64 2.1.20201109-2+b3 [1102 kB] Fetched 1102 kB in 0s (71.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpepk9tnqc/libclipper2_2.1.20201109-2+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (17.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyh1iix_o/libpam-runtime_1.7.0-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libhsakmt1 arm64 6.2.4+ds-1 [58.3 kB] Fetched 58.3 kB in 0s (2755 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8qeq913k/libhsakmt1_6.2.4+ds-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Fetched 235 kB in 0s (17.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaionjyrw/libssh2-1t64_1.11.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libhwasan0 arm64 15.2.0-7 [1480 kB] Fetched 1480 kB in 0s (98.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpym7aaoay/libhwasan0_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-system1.83.0 arm64 1.83.0-5 [231 kB] Fetched 231 kB in 0s (22.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0zcbs9ti/libboost-system1.83.0_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfontenc1 arm64 1:1.1.8-1+b2 [22.5 kB] Fetched 22.5 kB in 0s (2108 kB/s) dpkg-name: info: moved 'libfontenc1_1%3a1.1.8-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmp113r_3qf/libfontenc1_1.1.8-1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libsframe2 arm64 2.45-8 [79.7 kB] Fetched 79.7 kB in 0s (2875 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplt2qx7td/libsframe2_2.45-8_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-legacy-cgi all 2.6.3-1 [16.5 kB] Fetched 16.5 kB in 0s (1219 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn6qx6t0s/python3-legacy-cgi_2.6.3-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 cpp-15 arm64 15.2.0-7 [1272 B] Fetched 1272 B in 0s (65.7 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7cqjejjl/cpp-15_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.3-3 [74.8 kB] Fetched 74.8 kB in 0s (7049 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfd61mvte/readline-common_8.3-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 liblsan0 arm64 15.2.0-7 [1194 kB] Fetched 1194 kB in 0s (51.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcyi7imm2/liblsan0_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssh2-1-dev arm64 1.11.1-1 [388 kB] Fetched 388 kB in 0s (18.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9hzvk_c4/libssh2-1-dev_1.11.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libp11-kit-dev arm64 0.25.9-2 [220 kB] Fetched 220 kB in 0s (20.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_6fx_j6f/libp11-kit-dev_0.25.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2z1gutnf/sensible-utils_0.0.26_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libdconf1 arm64 0.49.0-1 [41.8 kB] Fetched 41.8 kB in 0s (2337 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvwbmw5le/libdconf1_0.49.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxslt1.1 arm64 1.1.43-0.3 [146 kB] Fetched 146 kB in 0s (8646 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcv4v9z8n/libxslt1.1_1.1.43-0.3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 liblcms2-2 arm64 2.16-2 [151 kB] Fetched 151 kB in 0s (14.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp0d3bxie/liblcms2-2_2.16-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 mawk arm64 1.3.4.20250131-1 [134 kB] Fetched 134 kB in 0s (5760 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8qmdhjvd/mawk_1.3.4.20250131-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgtk-3-0t64 arm64 3.24.51-1 [2698 kB] Fetched 2698 kB in 0s (70.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm3micg0a/libgtk-3-0t64_3.24.51-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python-matplotlib-data all 3.10.7+dfsg1-1 [2737 kB] Fetched 2737 kB in 0s (125 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb028r8wm/python-matplotlib-data_3.10.7+dfsg1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdk-pixbuf2.0-common all 2.44.4+dfsg-1 [313 kB] Fetched 313 kB in 0s (26.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp73o2ajux/libgdk-pixbuf2.0-common_2.44.4+dfsg-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libselinux1 arm64 3.9-2 [80.1 kB] Fetched 80.1 kB in 0s (4274 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy5dp437v/libselinux1_3.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdeflate-dev arm64 1.23-2 [51.3 kB] Fetched 51.3 kB in 0s (2031 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1frx3dwv/libdeflate-dev_1.23-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 pkgconf arm64 1.8.1-4 [26.1 kB] Fetched 26.1 kB in 0s (2576 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgfhp84s6/pkgconf_1.8.1-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-contourpy arm64 1.3.1-2 [191 kB] Fetched 191 kB in 0s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu30xuagz/python3-contourpy_1.3.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtcl8.6 arm64 8.6.17+dfsg-1 [982 kB] Fetched 982 kB in 0s (36.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7n0ead7g/libtcl8.6_8.6.17+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwxbase3.2-1t64 arm64 3.2.8+dfsg-2 [919 kB] Fetched 919 kB in 0s (36.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwv4gv0m0/libwxbase3.2-1t64_3.2.8+dfsg-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwebp7 arm64 1.5.0-0.1 [271 kB] Fetched 271 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8stttj23/libwebp7_1.5.0-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 w3c-sgml-lib all 1.3-3 [273 kB] Fetched 273 kB in 0s (24.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqsjwjxnn/w3c-sgml-lib_1.3-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 librav1e0.8 arm64 0.8.1-5 [688 kB] Fetched 688 kB in 0s (52.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2i7c4pv9/librav1e0.8_0.8.1-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-fortran-310 arm64 1.14.5+repack-4 [114 kB] Fetched 114 kB in 0s (7625 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpybigmklb/libhdf5-fortran-310_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtasn1-6-dev arm64 4.20.0-2 [96.7 kB] Fetched 96.7 kB in 0s (4837 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzgf6hqgc/libtasn1-6-dev_4.20.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdrm-amdgpu1 arm64 2.4.127-1 [22.7 kB] Fetched 22.7 kB in 0s (1089 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu1w9vh47/libdrm-amdgpu1_2.4.127-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libantlr3c-3.4-0 arm64 3.4+dfsg-4+b2 [47.9 kB] Fetched 47.9 kB in 0s (2300 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkcahs1mx/libantlr3c-3.4-0_3.4+dfsg-4+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxdmcp6 arm64 1:1.1.5-1 [27.8 kB] Fetched 27.8 kB in 0s (1133 kB/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpxxd7qy1h/libxdmcp6_1.1.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pil arm64 12.0.0-1 [505 kB] Fetched 505 kB in 0s (27.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2t_m82yi/python3-pil_12.0.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-iniconfig all 2.1.0-1 [7432 B] Fetched 7432 B in 0s (627 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu4739lky/python3-iniconfig_2.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-tqdm all 4.67.1-6 [90.9 kB] Fetched 90.9 kB in 0s (5569 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpusvuswtu/python3-tqdm_4.67.1-6_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5dbus5t64 arm64 5.15.17+dfsg-4 [204 kB] Fetched 204 kB in 0s (20.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk5ff3vlz/libqt5dbus5t64_5.15.17+dfsg-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpciaccess0 arm64 0.17-3+b3 [51.2 kB] Fetched 51.2 kB in 0s (2255 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcz1mxk87/libpciaccess0_0.17-3+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgnutls28-dev arm64 3.8.10-2 [1438 kB] Fetched 1438 kB in 0s (42.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw6a68c0e/libgnutls28-dev_3.8.10-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.23.0-1 [11.0 kB] Fetched 11.0 kB in 0s (581 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbbg8wisa/python3-zipp_3.23.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblerc4 arm64 4.0.0+ds-5 [146 kB] Fetched 146 kB in 0s (13.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv9rum72k/liblerc4_4.0.0+ds-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libice6 arm64 2:1.1.1-1 [62.1 kB] Fetched 62.1 kB in 0s (2907 kB/s) dpkg-name: info: moved 'libice6_2%3a1.1.1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpsaj9iibo/libice6_1.1.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjbig0 arm64 2.1-6.1+b2 [30.4 kB] Fetched 30.4 kB in 0s (2893 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb0lckb1w/libjbig0_2.1-6.1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-chardet all 5.2.0+dfsg-2 [108 kB] Fetched 108 kB in 0s (4543 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkihlc1je/python3-chardet_5.2.0+dfsg-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 perl-base arm64 5.40.1-6 [1527 kB] Fetched 1527 kB in 0s (48.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3of5019n/perl-base_5.40.1-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaec0 arm64 1.1.4-2 [22.6 kB] Fetched 22.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9mmc9baz/libaec0_1.1.4-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 systemd-sysv arm64 258.1-1 [63.4 kB] Fetched 63.4 kB in 0s (2840 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphx2_1kt_/systemd-sysv_258.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnl-3-200 arm64 3.11.0-2 [57.9 kB] Fetched 57.9 kB in 0s (2940 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuxfcv8a2/libnl-3-200_3.11.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.9-1 [1900 kB] Fetched 1900 kB in 0s (53.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4y53qtxr/libpython3.13-stdlib_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp2-dev arm64 1.64.0-1.1+b1 [112 kB] Fetched 112 kB in 0s (5905 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmxfonf_k/libnghttp2-dev_1.64.0-1.1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libproc2-0 arm64 2:4.0.4-9 [62.8 kB] Fetched 62.8 kB in 0s (3327 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9_arm64.deb' to '/srv/rebuilderd/tmp/tmp_b54bxf9/libproc2-0_4.0.4-9_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pytest all 8.4.2-1 [266 kB] Fetched 266 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcipazkvz/python3-pytest_8.4.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libqt5help5 arm64 5.15.17-3 [145 kB] Fetched 145 kB in 0s (12.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd47ircv7/libqt5help5_5.15.17-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-attr all 25.4.0-1 [73.1 kB] Fetched 73.1 kB in 0s (4186 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1uk9o64k/python3-attr_25.4.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ibverbs-providers arm64 56.1-1+b1 [338 kB] Fetched 338 kB in 0s (16.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6p6t7cfo/ibverbs-providers_56.1-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libcolord2 arm64 1.4.8-1 [129 kB] Fetched 129 kB in 0s (6023 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphht2837l/libcolord2_1.4.8-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgprofng0 arm64 2.45-8 [670 kB] Fetched 670 kB in 0s (31.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppchhitw9/libgprofng0_2.45-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxau-dev arm64 1:1.0.11-1 [23.9 kB] Fetched 23.9 kB in 0s (1093 kB/s) dpkg-name: info: moved 'libxau-dev_1%3a1.0.11-1_arm64.deb' to '/srv/rebuilderd/tmp/tmptj418qxf/libxau-dev_1.0.11-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxdamage1 arm64 1:1.1.6-1+b2 [15.6 kB] Fetched 15.6 kB in 0s (395 kB/s) dpkg-name: info: moved 'libxdamage1_1%3a1.1.6-1+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmpjrhofcjt/libxdamage1_1.1.6-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Fetched 917 kB in 0s (39.5 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpkn6dgc9c/zlib1g-dev_1.3.dfsg+really1.3.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libharfbuzz0b arm64 12.1.0-1 [486 kB] Fetched 486 kB in 0s (31.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5zterqbr/libharfbuzz0b_12.1.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-date-time1.83-dev arm64 1.83.0-5 [239 kB] Fetched 239 kB in 0s (9737 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmj5k2yfb/libboost-date-time1.83-dev_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xinerama0 arm64 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (7720 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6odfdjyj/libxcb-xinerama0_1.17.0-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 ncurses-base all 6.5+20250216-2 [273 kB] Fetched 273 kB in 0s (14.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6d_hktit/ncurses-base_6.5+20250216-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-charset-normalizer arm64 3.4.3-1 [123 kB] Fetched 123 kB in 0s (6586 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpds1dllbq/python3-charset-normalizer_3.4.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-pint all 0.25-1 [229 kB] Fetched 229 kB in 0s (10.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpajo7_nt9/python3-pint_0.25-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-10 [55.0 kB] Fetched 55.0 kB in 0s (4191 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2xzo5xvz/libsasl2-2_2.1.28+dfsg1-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libavahi-common-data arm64 0.8-17 [113 kB] Fetched 113 kB in 0s (9484 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpddue647j/libavahi-common-data_0.8-17_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 shared-mime-info arm64 2.4-5+b3 [755 kB] Fetched 755 kB in 0s (30.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcywhgdhu/shared-mime-info_2.4-5+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 dconf-gsettings-backend arm64 0.49.0-1 [28.1 kB] Fetched 28.1 kB in 0s (1328 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoum36ar_/dconf-gsettings-backend_0.49.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dbus-system-bus-common all 1.16.2-2 [53.5 kB] Fetched 53.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk4tp0dx2/dbus-system-bus-common_1.16.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-7 [19.6 MB] Fetched 19.6 MB in 0s (153 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2jofa3cg/gcc-15-aarch64-linux-gnu_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libamdhip64-5 arm64 5.7.1-7 [8835 kB] Fetched 8835 kB in 0s (149 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp44v31x8q/libamdhip64-5_5.7.1-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libkrb5-dev arm64 1.21.3-5 [16.1 kB] Fetched 16.1 kB in 0s (862 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1i3jdmf4/libkrb5-dev_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Fetched 57.1 kB in 0s (2401 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_cxe4nar/libpsl5t64_0.21.2-1.1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgudev-1.0-0 arm64 238-7 [13.9 kB] Fetched 13.9 kB in 0s (722 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpie5rbht7/libgudev-1.0-0_238-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-7 [10.1 MB] Fetched 10.1 MB in 0s (100 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp59lgv16k/cpp-15-aarch64-linux-gnu_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-atomic1.83-dev arm64 1.83.0-5 [235 kB] Fetched 235 kB in 0s (11.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj32a01d0/libboost-atomic1.83-dev_1.83.0-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 mesa-libgallium arm64 25.2.5-1 [10.3 MB] Fetched 10.3 MB in 0s (161 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphknjgci_/mesa-libgallium_25.2.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-dev arm64 3.13.9-1 [5057 kB] Fetched 5057 kB in 0s (127 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps3whnb_6/libpython3.13-dev_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Fetched 840 kB in 0s (42.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqpwkr3hy/fonts-dejavu-core_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc6-dev arm64 2.41-12 [1621 kB] Fetched 1621 kB in 0s (64.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfy6s3t1e/libc6-dev_2.41-12_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 linux-libc-dev all 6.16.12-2 [2547 kB] Fetched 2547 kB in 0s (77.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv8dozl8t/linux-libc-dev_6.16.12-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-ufolib2 all 0.17.1+dfsg1-1 [33.0 kB] Fetched 33.0 kB in 0s (2453 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplr5i19__/python3-ufolib2_0.17.1+dfsg1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglu1-mesa-dev arm64 9.0.2-1.1+b3 [203 kB] Fetched 203 kB in 0s (16.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyoqazxdd/libglu1-mesa-dev_9.0.2-1.1+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 liblz4-1 arm64 1.10.0-4 [60.0 kB] Fetched 60.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpspy2jayx/liblz4-1_1.10.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Fetched 40.2 kB in 0s (3902 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo9orlx_t/libpipeline1_1.5.8-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfftw3-dev arm64 3.3.10-2+b1 [1280 kB] Fetched 1280 kB in 0s (83.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9568xq6t/libfftw3-dev_3.3.10-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (999 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmpm9y7yxhj/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dbus-user-session arm64 1.16.2-2 [52.1 kB] Fetched 52.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzpbqnqeh/dbus-user-session_1.16.2-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libcc1-0 arm64 15.2.0-7 [41.3 kB] Fetched 41.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ssfv6hl/libcc1-0_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-urllib3 all 2.5.0-1 [116 kB] Fetched 116 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9b4mh20c/python3-urllib3_2.5.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 findutils arm64 4.10.0-3 [696 kB] Fetched 696 kB in 0s (56.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmekolvg8/findutils_4.10.0-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 gcc-15 arm64 15.2.0-7 [514 kB] Fetched 514 kB in 0s (18.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdm9m9989/gcc-15_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-brotli arm64 1.1.0-2+b7 [300 kB] Fetched 300 kB in 0s (11.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmz2ty099/python3-brotli_1.1.0-2+b7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-10 [626 kB] Fetched 626 kB in 0s (27.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv7oiex5l/libdb5.3t64_5.3.28+dfsg2-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsm6 arm64 2:1.2.6-1 [36.4 kB] Fetched 36.4 kB in 0s (1771 kB/s) dpkg-name: info: moved 'libsm6_2%3a1.2.6-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp2ar4qmic/libsm6_1.2.6-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libthai0 arm64 0.1.29-2+b1 [48.4 kB] Fetched 48.4 kB in 0s (3062 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprelkef9i/libthai0_0.1.29-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-msgpack arm64 1.0.3-3+b5 [77.4 kB] Fetched 77.4 kB in 0s (5767 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpntzog4zm/python3-msgpack_1.0.3-3+b5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libibumad3 arm64 56.1-1+b1 [29.3 kB] Fetched 29.3 kB in 0s (1342 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl2csykqt/libibumad3_56.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-util1 arm64 0.4.1-1 [23.6 kB] Fetched 23.6 kB in 0s (983 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1u4a_o1t/libxcb-util1_0.4.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwxgtk-gl3.2-1t64 arm64 3.2.8+dfsg-2 [85.9 kB] Fetched 85.9 kB in 0s (3403 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3sh5zzhw/libwxgtk-gl3.2-1t64_3.2.8+dfsg-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgnutls-dane0t64 arm64 3.8.10-2 [456 kB] Fetched 456 kB in 0s (39.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp88owyng2/libgnutls-dane0t64_3.8.10-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4 [1196 B] Fetched 1196 B in 0s (114 kB/s) dpkg-name: info: moved 'g++-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpszwpz421/g++-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 binutils-common arm64 2.45-8 [2558 kB] Fetched 2558 kB in 0s (130 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfo74_t09/binutils-common_2.45-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-shape0 arm64 1.17.0-2+b1 [106 kB] Fetched 106 kB in 0s (5509 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp580k3sfx/libxcb-shape0_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglx-dev arm64 1.7.0-1+b2 [15.8 kB] Fetched 15.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptxp2u_qa/libglx-dev_1.7.0-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Fetched 489 kB in 0s (34.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3cway8lg/fonts-dejavu-mono_2.37-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libwebpdecoder3 arm64 1.5.0-0.1 [182 kB] Fetched 182 kB in 0s (7592 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphwbfxtno/libwebpdecoder3_1.5.0-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xinput0 arm64 1.17.0-2+b1 [130 kB] Fetched 130 kB in 0s (9440 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_qv_2sij/libxcb-xinput0_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhwloc15 arm64 2.12.2-1 [142 kB] Fetched 142 kB in 0s (6444 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbsfzz7bn/libhwloc15_2.12.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 librtmp-dev arm64 2.4+20151223.gitfa8646d.1-3 [173 kB] Fetched 173 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy6jz797l/librtmp-dev_2.4+20151223.gitfa8646d.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-rlpycairo all 0.3.0-4 [10.1 kB] Fetched 10.1 kB in 0s (442 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_jzb583j/python3-rlpycairo_0.3.0-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-xkb1 arm64 1.17.0-2+b1 [129 kB] Fetched 129 kB in 0s (10.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpztk9p8k3/libxcb-xkb1_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-data all 2:1.8.12-1 [343 kB] Fetched 343 kB in 0s (24.8 MB/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.12-1_all.deb' to '/srv/rebuilderd/tmp/tmpmqbvdq63/libx11-data_1.8.12-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libexpat1-dev arm64 2.7.3-1 [150 kB] Fetched 150 kB in 0s (12.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphfxxcjzm/libexpat1-dev_2.7.3-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libopenmpi40 arm64 5.0.8-10+b1 [2104 kB] Fetched 2104 kB in 0s (82.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2cxwohrj/libopenmpi40_5.0.8-10+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-cpp-310 arm64 1.14.5+repack-4 [24.9 kB] Fetched 24.9 kB in 0s (643 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpimbac6b5/libhdf5-hl-cpp-310_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Fetched 179 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsd61500b/libldap2_2.6.10+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-dev arm64 3.13.7-1 [10.5 kB] Fetched 10.5 kB in 0s (470 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptm0ao_ax/libpython3-dev_3.13.7-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libstdc++6 arm64 15.2.0-7 [647 kB] Fetched 647 kB in 0s (57.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr8wzod3u/libstdc++6_15.2.0-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Fetched 189 kB in 0s (16.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkqu19yci/libelf1t64_0.193-3_arm64.deb' Downloading dependency 383 of 641: libpam-runtime:arm64=1.7.0-5 Downloading dependency 384 of 641: libhsakmt1:arm64=6.2.4+ds-1 Downloading dependency 385 of 641: libssh2-1t64:arm64=1.11.1-1 Downloading dependency 386 of 641: libhwasan0:arm64=15.2.0-7 Downloading dependency 387 of 641: libboost-system1.83.0:arm64=1.83.0-5 Downloading dependency 388 of 641: libfontenc1:arm64=1:1.1.8-1+b2 Downloading dependency 389 of 641: 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dependency 465 of 641: fonts-dejavu-core:arm64=2.37-8 Downloading dependency 466 of 641: libc6-dev:arm64=2.41-12 Downloading dependency 467 of 641: linux-libc-dev:arm64=6.16.12-2 Downloading dependency 468 of 641: python3-ufolib2:arm64=0.17.1+dfsg1-1 Downloading dependency 469 of 641: libglu1-mesa-dev:arm64=9.0.2-1.1+b3 Downloading dependency 470 of 641: liblz4-1:arm64=1.10.0-4 Downloading dependency 471 of 641: libpipeline1:arm64=1.5.8-1 Downloading dependency 472 of 641: libfftw3-dev:arm64=3.3.10-2+b1 Downloading dependency 473 of 641: libaudit-common:arm64=1:4.1.2-1 Downloading dependency 474 of 641: dbus-user-session:arm64=1.16.2-2 Downloading dependency 475 of 641: libcc1-0:arm64=15.2.0-7 Downloading dependency 476 of 641: python3-urllib3:arm64=2.5.0-1 Downloading dependency 477 of 641: findutils:arm64=4.10.0-3 Downloading dependency 478 of 641: gcc-15:arm64=15.2.0-7 Downloading dependency 479 of 641: python3-brotli:arm64=1.1.0-2+b7 Downloading dependency 480 of 641: libdb5.3t64:arm64=5.3.28+dfsg2-10 Downloading dependency 481 of 641: libsm6:arm64=2:1.2.6-1 Downloading dependency 482 of 641: libthai0:arm64=0.1.29-2+b1 Downloading dependency 483 of 641: python3-msgpack:arm64=1.0.3-3+b5 Downloading dependency 484 of 641: libibumad3:arm64=56.1-1+b1 Downloading dependency 485 of 641: libxcb-util1:arm64=0.4.1-1 Downloading dependency 486 of 641: libwxgtk-gl3.2-1t64:arm64=3.2.8+dfsg-2 Downloading dependency 487 of 641: libgnutls-dane0t64:arm64=3.8.10-2 Downloading dependency 488 of 641: g++-aarch64-linux-gnu:arm64=4:15.2.0-4 Downloading dependency 489 of 641: binutils-common:arm64=2.45-8 Downloading dependency 490 of 641: libxcb-shape0:arm64=1.17.0-2+b1 Downloading dependency 491 of 641: libglx-dev:arm64=1.7.0-1+b2 Downloading dependency 492 of 641: fonts-dejavu-mono:arm64=2.37-8 Downloading dependency 493 of 641: libwebpdecoder3:arm64=1.5.0-0.1 Downloading dependency 494 of 641: libxcb-xinput0:arm64=1.17.0-2+b1 Downloading dependency 495 of 641: libhwloc15:arm64=2.12.2-1 Downloading dependency 496 of 641: librtmp-dev:arm64=2.4+20151223.gitfa8646d.1-3 Downloading dependency 497 of 641: python3-rlpycairo:arm64=0.3.0-4 Downloading dependency 498 of 641: libxcb-xkb1:arm64=1.17.0-2+b1 Downloading dependency 499 of 641: libx11-data:arm64=2:1.8.12-1 Downloading dependency 500 of 641: libexpat1-dev:arm64=2.7.3-1 Downloading dependency 501 of 641: libopenmpi40:arm64=5.0.8-10+b1 Downloading dependency 502 of 641: libhdf5-hl-cpp-310:arm64=1.14.5+repack-4 Downloading dependency 503 of 641: libldap2:arm64=2.6.10+dfsg-1 Downloading dependency 504 of 641: libpython3-dev:arm64=3.13.7-1 Downloading dependency 505 of 641: libstdc++6:arm64=15.2.0-7 Downloading dependency 506 of 641: libelf1t64:arm64=0.193-3 Downloading dependency 507 of 641: tk8.6-blt2.5:arm64=2.5.3+dfsg-8Get:1 http://deb.debian.org/debian unstable/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-8 [537 kB] Fetched 537 kB in 0s (16.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpun07wkig/tk8.6-blt2.5_2.5.3+dfsg-8_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-zopfli arm64 0.2.3.post1-1 [10.2 kB] Fetched 10.2 kB in 0s (747 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnbjyz4y_/python3-zopfli_0.2.3.post1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libseccomp2 arm64 2.6.0-2 [51.0 kB] Fetched 51.0 kB in 0s (2145 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy8r7hsdm/libseccomp2_2.6.0-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sgml-base all 1.31+nmu1 [10.9 kB] Fetched 10.9 kB in 0s (520 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb0mxi8x7/sgml-base_1.31+nmu1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuuid1 arm64 2.41.2-4 [37.8 kB] Fetched 37.8 kB in 0s (2013 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7hlc_207/libuuid1_2.41.2-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 autopoint all 0.23.1-2 [770 kB] Fetched 770 kB in 0s (40.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphrv67v1c/autopoint_0.23.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libnghttp3-dev arm64 1.12.0-1 [91.6 kB] Fetched 91.6 kB in 0s (6359 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmeyd_fc9/libnghttp3-dev_1.12.0-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libasan8 arm64 15.2.0-7 [2601 kB] Fetched 2601 kB in 0s (107 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprgiogodx/libasan8_15.2.0-7_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libvulkan1 arm64 1.4.321.0-1 [130 kB] Fetched 130 kB in 0s (8346 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplihcse17/libvulkan1_1.4.321.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjansson4 arm64 2.14-2+b3 [39.2 kB] Fetched 39.2 kB in 0s (1852 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppek6q7rz/libjansson4_2.14-2+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsemanage-common all 3.9-1 [7888 B] Fetched 7888 B in 0s (333 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm8hkgtqp/libsemanage-common_3.9-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsharpyuv0 arm64 1.5.0-0.1 [114 kB] Fetched 114 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmornsjxx/libsharpyuv0_1.5.0-0.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 coreutils arm64 9.7-3 [2949 kB] Fetched 2949 kB in 0s (96.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsiy9s8fn/coreutils_9.7-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmtdev1t64 arm64 1.1.7-1 [22.5 kB] Fetched 22.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxuvxrn29/libmtdev1t64_1.1.7-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libsystemd-shared arm64 258.1-1 [1979 kB] Fetched 1979 kB in 0s (78.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmdtqc16e/libsystemd-shared_258.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dbus arm64 1.16.2-2 [70.7 kB] Fetched 70.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpon41oyo6/dbus_1.16.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libapparmor1 arm64 4.1.0-1 [42.9 kB] Fetched 42.9 kB in 0s (3445 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp86pj20gl/libapparmor1_4.1.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 mount arm64 2.41.2-4 [161 kB] Fetched 161 kB in 0s (13.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp54h9cwdc/mount_2.41.2-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Fetched 1612 kB in 0s (62.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0rlbzgmu/gettext_0.23.1-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libstdc++-15-dev arm64 15.2.0-7 [2346 kB] Fetched 2346 kB in 0s (105 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpckn2e9ay/libstdc++-15-dev_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm6t64 arm64 1.26-1 [77.5 kB] Fetched 77.5 kB in 0s (5566 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu4ckt70z/libgdbm6t64_1.26-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzopfli1 arm64 1.0.3-3 [95.2 kB] Fetched 95.2 kB in 0s (4195 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpta0kf75v/libzopfli1_1.0.3-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.13.7-1 [28.3 kB] Fetched 28.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3imp9z55/python3_3.13.7-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-tk arm64 3.13.9-1 [8688 B] Fetched 8688 B in 0s (517 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpod0glj38/python3-tk_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.9-1 [2061 kB] Fetched 2061 kB in 0s (82.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphqkb1vmb/python3.13-minimal_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 x11proto-dev all 2024.1-1 [603 kB] Fetched 603 kB in 0s (25.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplx92fr18/x11proto-dev_2024.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4 [1432 B] Fetched 1432 B in 0s (84.8 kB/s) dpkg-name: info: moved 'gcc-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmppkqg7dks/gcc-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5gui5t64 arm64 5.15.17+dfsg-4 [3256 kB] Fetched 3256 kB in 0s (79.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzk9v_1g7/libqt5gui5t64_5.15.17+dfsg-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.13.7-1 [1044 B] Fetched 1044 B in 0s (50.9 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu_72wq4g/python3-all_3.13.7-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ocl-icd-libopencl1 arm64 2.3.4-1 [42.2 kB] Fetched 42.2 kB in 0s (3285 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbdpln2rq/ocl-icd-libopencl1_2.3.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdpkg-perl all 1.22.21 [650 kB] Fetched 650 kB in 0s (28.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplpuq3yb0/libdpkg-perl_1.22.21_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libatomic1 arm64 15.2.0-7 [9940 B] Fetched 9940 B in 0s (930 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2rjqroqp/libatomic1_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libclipper-dev arm64 2.1.20201109-2+b3 [82.4 kB] Fetched 82.4 kB in 0s (2414 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9fejb7gy/libclipper-dev_2.1.20201109-2+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libopengl-dev arm64 1.7.0-1+b2 [5376 B] Fetched 5376 B in 0s (274 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpszx69he8/libopengl-dev_1.7.0-1+b2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libllvm19 arm64 1:19.1.7-7 [23.2 MB] Fetched 23.2 MB in 0s (126 MB/s) dpkg-name: info: moved 'libllvm19_1%3a19.1.7-7_arm64.deb' to '/srv/rebuilderd/tmp/tmpdttw4dvs/libllvm19_19.1.7-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsepol2 arm64 3.9-2 [263 kB] Fetched 263 kB in 0s (16.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3sqfpssv/libsepol2_3.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libccp4f0t64 arm64 8.0.0-5 [184 kB] Fetched 184 kB in 0s (12.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg3ow8so5/libccp4f0t64_8.0.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcairo-gobject2 arm64 1.18.4-1+b1 [130 kB] Fetched 130 kB in 0s (7472 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp633u77bd/libcairo-gobject2_1.18.4-1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Fetched 241 kB in 0s (17.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzmghr868/gettext-base_0.23.1-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 dconf-service arm64 0.49.0-1 [31.9 kB] Fetched 31.9 kB in 0s (1026 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_692vv16/dconf-service_0.49.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit1 arm64 1:4.1.2-1 [59.5 kB] Fetched 59.5 kB in 0s (2994 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpf0ejq5rh/libaudit1_4.1.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-hl-310 arm64 1.14.5+repack-4 [68.4 kB] Fetched 68.4 kB in 0s (3229 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf4eewhsl/libhdf5-hl-310_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxtst6 arm64 2:1.2.5-1 [25.7 kB] Fetched 25.7 kB in 0s (1130 kB/s) dpkg-name: info: moved 'libxtst6_2%3a1.2.5-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp3br50hv0/libxtst6_1.2.5-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libldap-dev arm64 2.6.10+dfsg-1 [305 kB] Fetched 305 kB in 0s (14.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgruj6kh9/libldap-dev_2.6.10+dfsg-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-icccm4 arm64 0.4.2-1 [27.2 kB] Fetched 27.2 kB in 0s (1295 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0gccwljz/libxcb-icccm4_0.4.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhdf5-dev arm64 1.14.5+repack-4 [3219 kB] Fetched 3219 kB in 0s (114 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6z_bo85h/libhdf5-dev_1.14.5+repack-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libavahi-common3 arm64 0.8-17 [44.9 kB] Fetched 44.9 kB in 0s (2345 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk5xpb0j1/libavahi-common3_0.8-17_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp arm64 4:15.2.0-4 [1568 B] Fetched 1568 B in 0s (0 B/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpn6uaji4i/cpp_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm-compat4t64 arm64 1.26-1 [52.8 kB] Fetched 52.8 kB in 0s (3024 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpahfc6r72/libgdbm-compat4t64_1.26-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-kiwisolver arm64 1.4.10~rc0-1 [56.9 kB] Fetched 56.9 kB in 0s (5585 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk6bwi9kn/python3-kiwisolver_1.4.10~rc0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41.2-4 [97.3 kB] Fetched 97.3 kB in 0s (6912 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpolin_e7o/bsdextrautils_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgpg-error0 arm64 1.56-2 [84.0 kB] Fetched 84.0 kB in 0s (5496 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpalgtwug8/libgpg-error0_1.56-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libkdb5-10t64 arm64 1.21.3-5 [41.3 kB] Fetched 41.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa4wuaxp7/libkdb5-10t64_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libonig5 arm64 6.9.10-1 [187 kB] Fetched 187 kB in 0s (17.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpccikm2xf/libonig5_6.9.10-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-dev arm64 3.13.7-1 [26.1 kB] Fetched 26.1 kB in 0s (2312 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprqvvusng/python3-dev_3.13.7-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjq1 arm64 1.8.1-4 [150 kB] Fetched 150 kB in 0s (10.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzszysqlx/libjq1_1.8.1-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtiff6 arm64 4.7.1-1 [334 kB] Fetched 334 kB in 0s (20.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxosr05yp/libtiff6_4.7.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxxhash-dev arm64 0.8.3-2 [82.6 kB] Fetched 82.6 kB in 0s (4477 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxum45cs4/libxxhash-dev_0.8.3-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libatk1.0-0t64 arm64 2.58.1-1 [50.1 kB] Fetched 50.1 kB in 0s (2743 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpazipnof7/libatk1.0-0t64_2.58.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sfftw2 arm64 2.1.5-7+b1 [203 kB] Fetched 203 kB in 0s (19.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb7c2rh2r/sfftw2_2.1.5-7+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgcc-14-dev arm64 14.3.0-10 [2366 kB] Fetched 2366 kB in 0s (63.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxqkjiz6g/libgcc-14-dev_14.3.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-xcb1 arm64 2:1.8.12-1 [247 kB] Fetched 247 kB in 0s (21.4 MB/s) dpkg-name: info: moved 'libx11-xcb1_2%3a1.8.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp2md0fb9k/libx11-xcb1_1.8.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dbus-daemon arm64 1.16.2-2 [152 kB] Fetched 152 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpojertbh8/dbus-daemon_1.16.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfontconfig1 arm64 2.15.0-2.4 [387 kB] Fetched 387 kB in 0s (38.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzjaq8ydn/libfontconfig1_2.15.0-2.4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (1041 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxppvgkhh/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fontconfig arm64 2.15.0-2.4 [463 kB] Fetched 463 kB in 0s (44.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptld8a6xd/fontconfig_2.15.0-2.4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libxkbcommon-x11-0 arm64 1.7.0-2.1 [15.3 kB] Fetched 15.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnl79zaof/libxkbcommon-x11-0_1.7.0-2.1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libcurl3t64-gnutls arm64 8.17.0~rc2-1 [363 kB] Fetched 363 kB in 0s (32.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp291599_4/libcurl3t64-gnutls_8.17.0~rc2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules arm64 1.7.0-5 [172 kB] Fetched 172 kB in 0s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnrb1538q/libpam-modules_1.7.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtk8.6 arm64 8.6.17-1 [740 kB] Fetched 740 kB in 0s (58.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjvx2eznc/libtk8.6_8.6.17-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libatk-bridge2.0-0t64 arm64 2.58.1-1 [64.5 kB] Fetched 64.5 kB in 0s (2594 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxxxa6w7m/libatk-bridge2.0-0t64_2.58.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5widgets5t64 arm64 5.15.17+dfsg-4 [2266 kB] Fetched 2266 kB in 0s (70.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp00zcyu39/libqt5widgets5t64_5.15.17+dfsg-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bzip2 arm64 1.0.8-6 [39.5 kB] Fetched 39.5 kB in 0s (3831 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp51saffss/bzip2_1.0.8-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4 [5288 B] Fetched 5288 B in 0s (0 B/s) dpkg-name: info: moved 'cpp-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpxe7v3gwo/cpp-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xtrans-dev all 1.6.0-1 [93.5 kB] Fetched 93.5 kB in 0s (7423 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwkr9j9uz/xtrans-dev_1.6.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgnutls-openssl27t64 arm64 3.8.10-2 [456 kB] Fetched 456 kB in 0s (21.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0wldrgcd/libgnutls-openssl27t64_3.8.10-2_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libpam-systemd arm64 258.1-1 [286 kB] Fetched 286 kB in 0s (13.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmpl505wr/libpam-systemd_258.1-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-scipy arm64 1.16.2-3 [14.7 MB] Fetched 14.7 MB in 0s (130 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy9rnwvge/python3-scipy_1.16.2-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Fetched 32.4 kB in 0s (1596 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl3z3mmal/libkrb5support0_1.21.3-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libc6 arm64 2.41-12 [2489 kB] Fetched 2489 kB in 0s (140 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplan195rh/libc6_2.41-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 pybind11-dev all 3.0.1-2 [240 kB] Fetched 240 kB in 0s (19.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt37om554/pybind11-dev_3.0.1-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dbus-bin arm64 1.16.2-2 [78.8 kB] Fetched 78.8 kB in 0s (5086 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz8nw0j7n/dbus-bin_1.16.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxcb-shm0 arm64 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (10.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj98j6kh9/libxcb-shm0_1.17.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5sql5t64 arm64 5.15.17+dfsg-4 [122 kB] Fetched 122 kB in 0s (9267 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm6dsehvp/libqt5sql5t64_5.15.17+dfsg-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libjs-sphinxdoc all 8.2.3-8 [27.6 kB] Fetched 27.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprnivu6ki/libjs-sphinxdoc_8.2.3-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-flexparser all 0.4-1 [42.9 kB] Fetched 42.9 kB in 0s (3276 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpynu56tde/python3-flexparser_0.4-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-serialization1.83-dev arm64 1.83.0-5 [374 kB] Fetched 374 kB in 0s (24.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbsv2ul2l/libboost-serialization1.83-dev_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 21 [12.2 kB] Fetched 12.2 kB in 0s (607 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbgf_ef_e/dh-autoreconf_21_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhwloc-plugins arm64 2.12.2-1 [18.1 kB] Fetched 18.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeuvexpt4/libhwloc-plugins_2.12.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libccp4c0t64 arm64 8.0.0-5 [87.6 kB] Fetched 87.6 kB in 0s (4618 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg4yq18xe/libccp4c0t64_8.0.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjpeg62-turbo-dev arm64 1:2.1.5-4 [293 kB] Fetched 293 kB in 0s (25.6 MB/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a2.1.5-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpxvi4kuk5/libjpeg62-turbo-dev_2.1.5-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 python3-numpy-dev arm64 1:2.3.3+ds-3 [135 kB] Fetched 135 kB in 0s (9124 kB/s) dpkg-name: info: moved 'python3-numpy-dev_1%3a2.3.3+ds-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp30spflke/python3-numpy-dev_2.3.3+ds-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-urw-base35 all 20200910-8 [10.8 MB] Fetched 10.8 MB in 0s (120 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3q2p7_29/fonts-urw-base35_20200910-8_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-python1.83.0 arm64 1.83.0-5 [296 kB] Fetched 296 kB in 0s (24.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmk6i2573/libboost-python1.83.0_1.83.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libamd-comgr2 arm64 6.0+git20231212.4510c28+dfsg-3+b2 [12.1 MB] Fetched 12.1 MB in 0s (152 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0q511oxw/libamd-comgr2_6.0+git20231212.4510c28+dfsg-3+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbsd0 arm64 0.12.2-2 [129 kB] Fetched 129 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6pl62g2p/libbsd0_0.12.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libidn2-dev arm64 2.3.8-4 [102 kB] Fetched 102 kB in 0s (9271 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppcc355sv/libidn2-dev_2.3.8-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libcups2t64 arm64 2.4.14-1 [234 kB] Fetched 234 kB in 0s (15.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpokpfff4n/libcups2t64_2.4.14-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtiffxx6 arm64 4.7.1-1 [174 kB] Fetched 174 kB in 0s (16.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb9_yxuyb/libtiffxx6_4.7.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfftw3-single3 arm64 3.3.10-2+b1 [517 kB] Fetched 517 kB in 0s (35.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd0tffhcy/libfftw3-single3_3.3.10-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Fetched 577 kB in 0s (32.7 MB/s) dpkg-name: info: moved 'xfonts-encodings_1%3a1.0.4-2.2_all.deb' to '/srv/rebuilderd/tmp/tmpzca7p4ru/xfonts-encodings_1.0.4-2.2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libngtcp2-16 arm64 1.16.0-1 [123 kB] Fetched 123 kB in 0s (6426 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoxk2ekb_/libngtcp2-16_1.16.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libglvnd0 arm64 1.7.0-1+b2 [41.6 kB] Fetched 41.6 kB in 0s (2360 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn932s3wm/libglvnd0_1.7.0-1+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-mpmath all 1.3.0-2 [419 kB] Fetched 419 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2050q6a1/python3-mpmath_1.3.0-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libctf0 arm64 2.45-8 [85.7 kB] Fetched 85.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp66zxjujq/libctf0_2.45-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libevent-2.1-7t64 arm64 2.1.12-stable-10+b1 [170 kB] Fetched 170 kB in 0s (16.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9mvx2rc0/libevent-2.1-7t64_2.1.12-stable-10+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblzf1 arm64 3.6-4+b3 [10.1 kB] Fetched 10.1 kB in 0s (344 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfkvf_bmy/liblzf1_3.6-4+b3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 sysvinit-utils arm64 3.15-5 [34.8 kB] Fetched 34.8 kB in 0s (1661 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4evjy1kq/sysvinit-utils_3.15-5_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libglib2.0-0t64 arm64 2.86.1-1 [1436 kB] Fetched 1436 kB in 0s (65.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6f74a9ao/libglib2.0-0t64_2.86.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpsl-dev arm64 0.21.2-1.1+b1 [77.9 kB] Fetched 77.9 kB in 0s (3979 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm2keh3sd/libpsl-dev_0.21.2-1.1+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 g++-15 arm64 15.2.0-7 [24.1 kB] Fetched 24.1 kB in 0s (1172 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpue4n1tqn/g++-15_15.2.0-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblerc-dev arm64 4.0.0+ds-5 [164 kB] Fetched 164 kB in 0s (7078 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprai_tfqf/liblerc-dev_4.0.0+ds-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libx11-6 arm64 2:1.8.12-1 [795 kB] Fetched 795 kB in 0s (61.0 MB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp07bsw0pq/libx11-6_1.8.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.9-1 [764 kB] Fetched 764 kB in 0s (27.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwwy_yiv0/python3.13_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules-bin arm64 1.7.0-5 [48.3 kB] Fetched 48.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppjbv76go/libpam-modules-bin_1.7.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Fetched 21.5 kB in 0s (1225 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1si9f82b/libffi8_3.5.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xfonts-utils arm64 1:7.7+7 [89.3 kB] Fetched 89.3 kB in 0s (7994 kB/s) dpkg-name: info: moved 'xfonts-utils_1%3a7.7+7_arm64.deb' to '/srv/rebuilderd/tmp/tmphyhlrd00/xfonts-utils_7.7+7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.3-1 [96.5 kB] Fetched 96.5 kB in 0s (4592 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4z44ppiz/libexpat1_2.7.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Fetched 169 kB in 0s (14.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz1bhnc2q/libreadline8t64_8.3-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpangoft2-1.0-0 arm64 1.56.3-2 [56.5 kB] Fetched 56.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpswzx00d6/libpangoft2-1.0-0_1.56.3-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3 [56.3 kB] Fetched 56.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnsu2o78x/librtmp1_2.4+20151223.gitfa8646d.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debianutils arm64 5.23.2 [92.4 kB] Fetched 92.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo4pse9qz/debianutils_5.23.2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.1-7 [135 kB] Fetched 135 kB in 0s (5075 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz496aiop/libblas3_3.12.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 util-linux arm64 2.41.2-4 [1121 kB] Fetched 1121 kB in 0s (46.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5bteonnt/util-linux_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdgoal3qa/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmd4c0 arm64 0.5.2-2+b1 [46.1 kB] Fetched 46.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4c6ouijw/libmd4c0_0.5.2-2+b1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgcc-15-dev arm64 15.2.0-7 [2373 kB] Fetched 2373 kB in 0s (76.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvguvu556/libgcc-15-dev_15.2.0-7_arm64.deb' Downloading dependency 508 of 641: python3-zopfli:arm64=0.2.3.post1-1 Downloading dependency 509 of 641: libseccomp2:arm64=2.6.0-2 Downloading dependency 510 of 641: sgml-base:arm64=1.31+nmu1 Downloading dependency 511 of 641: libuuid1:arm64=2.41.2-4 Downloading dependency 512 of 641: autopoint:arm64=0.23.1-2 Downloading dependency 513 of 641: libnghttp3-dev:arm64=1.12.0-1 Downloading dependency 514 of 641: libasan8:arm64=15.2.0-7 Downloading dependency 515 of 641: libvulkan1:arm64=1.4.321.0-1 Downloading dependency 516 of 641: libjansson4:arm64=2.14-2+b3 Downloading dependency 517 of 641: libsemanage-common:arm64=3.9-1 Downloading dependency 518 of 641: libsharpyuv0:arm64=1.5.0-0.1 Downloading dependency 519 of 641: coreutils:arm64=9.7-3 Downloading dependency 520 of 641: libmtdev1t64:arm64=1.1.7-1 Downloading dependency 521 of 641: libsystemd-shared:arm64=258.1-1 Downloading dependency 522 of 641: dbus:arm64=1.16.2-2 Downloading dependency 523 of 641: libapparmor1:arm64=4.1.0-1 Downloading dependency 524 of 641: mount:arm64=2.41.2-4 Downloading dependency 525 of 641: gettext:arm64=0.23.1-2+b1 Downloading dependency 526 of 641: libstdc++-15-dev:arm64=15.2.0-7 Downloading dependency 527 of 641: libgdbm6t64:arm64=1.26-1 Downloading dependency 528 of 641: libzopfli1:arm64=1.0.3-3 Downloading dependency 529 of 641: python3:arm64=3.13.7-1 Downloading dependency 530 of 641: 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gettext-base:arm64=0.23.1-2+b1 Downloading dependency 546 of 641: dconf-service:arm64=0.49.0-1 Downloading dependency 547 of 641: libaudit1:arm64=1:4.1.2-1 Downloading dependency 548 of 641: libhdf5-hl-310:arm64=1.14.5+repack-4 Downloading dependency 549 of 641: libxtst6:arm64=2:1.2.5-1 Downloading dependency 550 of 641: libldap-dev:arm64=2.6.10+dfsg-1 Downloading dependency 551 of 641: libxcb-icccm4:arm64=0.4.2-1 Downloading dependency 552 of 641: libhdf5-dev:arm64=1.14.5+repack-4 Downloading dependency 553 of 641: libavahi-common3:arm64=0.8-17 Downloading dependency 554 of 641: cpp:arm64=4:15.2.0-4 Downloading dependency 555 of 641: libgdbm-compat4t64:arm64=1.26-1 Downloading dependency 556 of 641: python3-kiwisolver:arm64=1.4.10~rc0-1 Downloading dependency 557 of 641: bsdextrautils:arm64=2.41.2-4 Downloading dependency 558 of 641: libgpg-error0:arm64=1.56-2 Downloading dependency 559 of 641: libkdb5-10t64:arm64=1.21.3-5 Downloading dependency 560 of 641: libonig5:arm64=6.9.10-1 Downloading dependency 561 of 641: python3-dev:arm64=3.13.7-1 Downloading dependency 562 of 641: libjq1:arm64=1.8.1-4 Downloading dependency 563 of 641: libtiff6:arm64=4.7.1-1 Downloading dependency 564 of 641: libxxhash-dev:arm64=0.8.3-2 Downloading dependency 565 of 641: libatk1.0-0t64:arm64=2.58.1-1 Downloading dependency 566 of 641: sfftw2:arm64=2.1.5-7+b1 Downloading dependency 567 of 641: libgcc-14-dev:arm64=14.3.0-10 Downloading dependency 568 of 641: libx11-xcb1:arm64=2:1.8.12-1 Downloading dependency 569 of 641: dbus-daemon:arm64=1.16.2-2 Downloading dependency 570 of 641: libfontconfig1:arm64=2.15.0-2.4 Downloading dependency 571 of 641: libfile-stripnondeterminism-perl:arm64=1.15.0-1 Downloading dependency 572 of 641: fontconfig:arm64=2.15.0-2.4 Downloading dependency 573 of 641: libxkbcommon-x11-0:arm64=1.7.0-2.1 Downloading dependency 574 of 641: libcurl3t64-gnutls:arm64=8.17.0~rc2-1 Downloading dependency 575 of 641: libpam-modules:arm64=1.7.0-5 Downloading dependency 576 of 641: libtk8.6:arm64=8.6.17-1 Downloading dependency 577 of 641: libatk-bridge2.0-0t64:arm64=2.58.1-1 Downloading dependency 578 of 641: libqt5widgets5t64:arm64=5.15.17+dfsg-4 Downloading dependency 579 of 641: bzip2:arm64=1.0.8-6 Downloading dependency 580 of 641: cpp-aarch64-linux-gnu:arm64=4:15.2.0-4 Downloading dependency 581 of 641: xtrans-dev:arm64=1.6.0-1 Downloading dependency 582 of 641: libgnutls-openssl27t64:arm64=3.8.10-2 Downloading dependency 583 of 641: libpam-systemd:arm64=258.1-1 Downloading dependency 584 of 641: python3-scipy:arm64=1.16.2-3 Downloading dependency 585 of 641: libkrb5support0:arm64=1.21.3-5 Downloading dependency 586 of 641: libc6:arm64=2.41-12 Downloading dependency 587 of 641: pybind11-dev:arm64=3.0.1-2 Downloading dependency 588 of 641: dbus-bin:arm64=1.16.2-2 Downloading dependency 589 of 641: libxcb-shm0:arm64=1.17.0-2+b1 Downloading dependency 590 of 641: libqt5sql5t64:arm64=5.15.17+dfsg-4 Downloading dependency 591 of 641: libjs-sphinxdoc:arm64=8.2.3-8 Downloading dependency 592 of 641: python3-flexparser:arm64=0.4-1 Downloading dependency 593 of 641: libboost-serialization1.83-dev:arm64=1.83.0-5 Downloading dependency 594 of 641: dh-autoreconf:arm64=21 Downloading dependency 595 of 641: libhwloc-plugins:arm64=2.12.2-1 Downloading dependency 596 of 641: libccp4c0t64:arm64=8.0.0-5 Downloading dependency 597 of 641: libjpeg62-turbo-dev:arm64=1:2.1.5-4 Downloading dependency 598 of 641: python3-numpy-dev:arm64=1:2.3.3+ds-3 Downloading dependency 599 of 641: fonts-urw-base35:arm64=20200910-8 Downloading dependency 600 of 641: libboost-python1.83.0:arm64=1.83.0-5 Downloading dependency 601 of 641: libamd-comgr2:arm64=6.0+git20231212.4510c28+dfsg-3+b2 Downloading dependency 602 of 641: libbsd0:arm64=0.12.2-2 Downloading dependency 603 of 641: libidn2-dev:arm64=2.3.8-4 Downloading dependency 604 of 641: libcups2t64:arm64=2.4.14-1 Downloading dependency 605 of 641: libtiffxx6:arm64=4.7.1-1 Downloading dependency 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(5185 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqfxfocrr/dbus-session-bus-common_1.16.2-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libqt5core5t64 arm64 5.15.17+dfsg-4 [1809 kB] Fetched 1809 kB in 0s (57.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6s4peys7/libqt5core5t64_5.15.17+dfsg-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251025T023803Z sid/main arm64 libgcrypt20 arm64 1.11.2-2 [772 kB] Fetched 772 kB in 0s (53.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2o4jz75n/libgcrypt20_1.11.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 fonts-lato all 2.015-1 [2780 kB] Fetched 2780 kB in 0s (79.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphu0nl0jv/fonts-lato_2.015-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-mrcfile all 1.5.4-2 [118 kB] Fetched 118 kB in 0s (7091 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpirass6pw/python3-mrcfile_1.5.4-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfabric1 arm64 2.1.0-1.1 [548 kB] Fetched 548 kB in 0s (34.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxashgx2t/libfabric1_2.1.0-1.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pyparsing all 3.1.3-1 [148 kB] Fetched 148 kB in 0s (5469 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7vhkl6ki/python3-pyparsing_3.1.3-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxft2 arm64 2.3.6-1+b4 [51.6 kB] Fetched 51.6 kB in 0s (2840 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmdrhmfw/libxft2_2.3.6-1+b4_arm64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-buildpackage: info: host architecture arm64 dpkg-source --before-build . debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_arm64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpk8g3c_hk/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture arm64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.fJn9abd5i_ as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.fJn9abd5i_ 127.0.0.1 - - [29/Nov/2025 20:49:33] code 404, message File not found 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:42577 ./ InRelease 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:42577 ./ Release [462 B] 127.0.0.1 - - [29/Nov/2025 20:49:33] code 404, message File not found 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:42577 ./ Release.gpg 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:42577 ./ Packages [807 kB] Fetched 808 kB in 0s (16.8 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./gcc-15-base_15.2.0-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./libc6_2.41-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./libgcc-s1_15.2.0-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./mawk_1.3.4.20250131-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./base-files_14_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./libtinfo6_6.5%2b20250216-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./debianutils_5.23.2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./bash_5.3-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./libacl1_2.3.2-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./libattr1_2.5.2-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./libcap2_2.75-10%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./libgmp10_6.3.0%2bdfsg-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./libpcre2-8-0_10.46-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./libselinux1_3.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./libzstd1_1.5.7%2bdfsg-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./zlib1g_1.3.dfsg%2breally1.3.1-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:33] "GET /./libssl3t64_3.5.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./openssl-provider-legacy_3.5.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libsystemd0_258.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./coreutils_9.7-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./dash_0.5.12-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./diffutils_3.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libbz2-1.0_1.0.8-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./liblzma5_5.8.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libmd0_1.1.0-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./tar_1.35%2bdfsg-3.1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./dpkg_1.22.21_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./findutils_4.10.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./grep_3.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./gzip_1.13-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./hostname_3.25_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./ncurses-bin_6.5%2b20250216-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libcrypt1_4.4.38-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./perl-base_5.40.1-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./sed_4.9-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libaudit-common_4.1.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libcap-ng0_0.8.5-4%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libaudit1_4.1.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libdb5.3t64_5.3.28%2bdfsg2-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./debconf_1.5.91_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libpam0g_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libpam-modules-bin_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libpam-modules_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libpam-runtime_1.7.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libblkid1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libmount1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libsmartcols1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libudev1_258.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libuuid1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./util-linux_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libdebconfclient0_0.280_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./base-passwd_3.6.7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./init-system-helpers_1.69_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./libc-bin_2.41-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./ncurses-base_6.5%2b20250216-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [29/Nov/2025 20:49:34] "GET /./sysvinit-utils_3.15-5_arm64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.fJn9abd5i_ 127.0.0.1 - - [29/Nov/2025 20:49:37] code 404, message File not found 127.0.0.1 - - [29/Nov/2025 20:49:37] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:42577 ./ InRelease 127.0.0.1 - - [29/Nov/2025 20:49:37] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:42577 ./ Release 127.0.0.1 - - [29/Nov/2025 20:49:37] code 404, message File not found 127.0.0.1 - - [29/Nov/2025 20:49:37] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:42577 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... 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I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpk8g3c_hk/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.fJn9abd5i_ Reading package lists... Building dependency tree... Reading state information... libwayland-client0 is already the newest version (1.24.0-2+b1). libwayland-client0 set to manually installed. libunbound8 is already the newest version (1.24.1-1). libunbound8 set to manually installed. libtinfo6 is already the newest version (6.5+20250216-2). libavif16 is already the newest version (1.3.0-1+b1). libavif16 set to manually installed. libdbus-1-3 is already the newest version (1.16.2-2). libdbus-1-3 set to manually installed. libstdc++-14-dev is already the newest version (14.3.0-10). libstdc++-14-dev set to manually installed. libnl-route-3-200 is already the newest version (3.11.0-2). libnl-route-3-200 set to manually installed. libxnvctrl0 is already the newest version (535.171.04-1+b2). libxnvctrl0 set to manually installed. libc-bin is already the newest version (2.41-12). binutils is already the newest version (2.45-8). binutils set to manually installed. libxinerama1 is already the newest version (2:1.1.4-3+b4). libxinerama1 set to manually installed. libthai-data is already the newest version (0.1.29-2). libthai-data set to manually installed. python3-setuptools is already the newest version (78.1.1-0.1). python3-setuptools set to manually installed. libboost-thread1.83-dev is already the newest version (1.83.0-5). libboost-thread1.83-dev set to manually installed. libmmdb2-0 is already the newest version (2.0.22-1+b2). libmmdb2-0 set to manually installed. libwebpdemux2 is already the newest version (1.5.0-0.1). libwebpdemux2 set to manually installed. libbrotli-dev is already the newest version (1.1.0-2+b7). libbrotli-dev set to manually installed. libgmp-dev is already the newest version (2:6.3.0+dfsg-5). libgmp-dev set to manually installed. libdrm-common is already the newest version (2.4.127-1). libdrm-common set to manually installed. libccp4-dev is already the newest version (8.0.0-5). libccp4-dev set to manually installed. libgcc-s1 is already the newest version (15.2.0-7). perl-modules-5.40 is already the newest version (5.40.1-6). perl-modules-5.40 set to manually installed. libjpeg62-turbo is already the newest version (1:2.1.5-4). libjpeg62-turbo set to manually installed. libjpeg-dev is already the newest version (1:2.1.5-4). libjpeg-dev set to manually installed. python3-biopython is already the newest version (1.85+dfsg-5). python3-biopython set to manually installed. libxcursor1 is already the newest version (1:1.2.3-1). libxcursor1 set to manually installed. libcap-ng0 is already the newest version (0.8.5-4+b1). libxcb-glx0 is already the newest version (1.17.0-2+b1). libxcb-glx0 set to manually installed. libssl3t64 is already the newest version (3.5.4-1). python3-inflect is already the newest version (7.5.0-1). python3-inflect set to manually installed. libxdmcp-dev is already the newest version (1:1.1.5-1). libxdmcp-dev set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. libboost-dev is already the newest version (1.83.0.2+b2). libboost-dev set to manually installed. libboost-serialization1.83.0 is already the newest version (1.83.0-5). libboost-serialization1.83.0 set to manually installed. libann-cctbx-dev is already the newest version (1.1.2+doc-9+b2). libann-cctbx-dev set to manually installed. libhdf5-cpp-310 is already the newest version (1.14.5+repack-4). libhdf5-cpp-310 set to manually installed. libgl1 is already the newest version (1.7.0-1+b2). libgl1 set to manually installed. gtk-update-icon-cache is already the newest version (4.20.2+ds-1). gtk-update-icon-cache set to manually installed. python3-more-itertools is already the newest version (10.8.0-1). python3-more-itertools set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. libglut3.12 is already the newest version (3.4.0-6). libglut3.12 set to manually installed. libavahi-client3 is already the newest version (0.8-17). libavahi-client3 set to manually installed. libevdev2 is already the newest version (1.13.4+dfsg-1). libevdev2 set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5). libgnutls30t64 is already the newest version (3.8.10-2). libgnutls30t64 set to manually installed. libngtcp2-crypto-gnutls8 is already the newest version (1.16.0-1). libngtcp2-crypto-gnutls8 set to manually installed. libboost-numpy-dev is already the newest version (1.83.0.2+b2). libboost-numpy-dev set to manually installed. libngtcp2-crypto-ossl-dev is already the newest version (1.16.0-1). libngtcp2-crypto-ossl-dev set to manually installed. python3-pycbf is already the newest version (0.9.7+dfsg1-5.1). python3-pycbf set to manually installed. libopengl0 is already the newest version (1.7.0-1+b2). libopengl0 set to manually installed. libwebpmux3 is already the newest version (1.5.0-0.1). libwebpmux3 set to manually installed. libbrotli1 is already the newest version (1.1.0-2+b7). libbrotli1 set to manually installed. libgbm1 is already the newest version (25.2.5-1). libgbm1 set to manually installed. libdeflate0 is already the newest version (1.23-2). libdeflate0 set to manually installed. libllvm17t64 is already the newest version (1:17.0.6-22+b3). libllvm17t64 set to manually installed. diffutils is already the newest version (1:3.12-1). libc-dev-bin is already the newest version (2.41-12). libc-dev-bin set to manually installed. python3-nxmx is already the newest version (0.0.4-1). python3-nxmx set to manually installed. libxcb-randr0 is already the newest version (1.17.0-2+b1). libxcb-randr0 set to manually installed. python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. python3-pip is already the newest version (25.2+dfsg-1). python3-pip set to manually installed. libblkid1 is already the newest version (2.41.2-4). libhogweed6t64 is already the newest version (3.10.2-1). libhogweed6t64 set to manually installed. debhelper is already the newest version (13.28). debhelper set to manually installed. libinput-bin is already the newest version (1.28.1-1). libinput-bin set to manually installed. libxcb-render0 is already the newest version (1.17.0-2+b1). libxcb-render0 set to manually installed. x11-common is already the newest version (1:7.7+26). x11-common set to manually installed. libpython3-stdlib is already the newest version (3.13.7-1). libpython3-stdlib set to manually installed. base-files is already the newest version (14). gcc-15-base is already the newest version (15.2.0-7). libmpc3 is already the newest version (1.3.1-2). libmpc3 set to manually installed. libboost-chrono1.83.0t64 is already the newest version (1.83.0-5). libboost-chrono1.83.0t64 set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). libqhull-r8.0 is already the newest version (2020.2-7). libqhull-r8.0 set to manually installed. python3-pkg-resources is already the newest version (78.1.1-0.1). python3-pkg-resources set to manually installed. python3-certifi is already the newest version (2025.1.31+ds-1). python3-certifi set to manually installed. python3-numpy is already the newest version (1:2.3.3+ds-3). python3-numpy set to manually installed. grep is already the newest version (3.12-1). build-essential is already the newest version (12.12). build-essential set to manually installed. libboost-numpy1.83.0 is already the newest version (1.83.0-5). libboost-numpy1.83.0 set to manually installed. adwaita-icon-theme is already the newest version (49.0-1). adwaita-icon-theme set to manually installed. python3-idna is already the newest version (3.10-1). python3-idna set to manually installed. fftw-dev is already the newest version (2.1.5-7+b1). fftw-dev set to manually installed. libxcb-present0 is already the newest version (1.17.0-2+b1). libxcb-present0 set to manually installed. fontconfig-config is already the newest version (2.15.0-2.4). fontconfig-config set to manually installed. xkb-data is already the newest version (2.42-1). xkb-data set to manually installed. libpopt0 is already the newest version (1.19+dfsg-2). libpopt0 set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. libpython3.13-minimal is already the newest version (3.13.9-1). libpython3.13-minimal set to manually installed. python3-fs is already the newest version (2.4.16-8). python3-fs set to manually installed. python3-psutil is already the newest version (7.1.0-1). python3-psutil set to manually installed. libtasn1-6 is already the newest version (4.20.0-2). libtasn1-6 set to manually installed. python3-decorator is already the newest version (5.2.1-2). python3-decorator set to manually installed. sed is already the newest version (4.9-2+b1). m4 is already the newest version (1.4.20-2). m4 set to manually installed. libxss1 is already the newest version (1:1.2.3-1+b3). libxss1 set to manually installed. libgssrpc4t64 is already the newest version (1.21.3-5). libgssrpc4t64 set to manually installed. libraqm0 is already the newest version (0.10.3-1). libraqm0 set to manually installed. pkgconf-bin is already the newest version (1.8.1-4). pkgconf-bin set to manually installed. libwayland-egl1 is already the newest version (1.24.0-2+b1). libwayland-egl1 set to manually installed. tar is already the newest version (1.35+dfsg-3.1). libpkgconf3 is already the newest version (1.8.1-4). libpkgconf3 set to manually installed. libcom-err2 is already the newest version (1.47.2-3+b3). libcom-err2 set to manually installed. openssl is already the newest version (3.5.4-1). openssl set to manually installed. python3-cycler is already the newest version (0.12.1-2). python3-cycler set to manually installed. libgfortran5 is already the newest version (15.2.0-7). libgfortran5 set to manually installed. python3-matplotlib is already the newest version (3.10.7+dfsg1-1). python3-matplotlib set to manually installed. libboost-python1.83-dev is already the newest version (1.83.0-5). libboost-python1.83-dev set to manually installed. blt is already the newest version (2.5.3+dfsg-8). blt set to manually installed. python3-wheel is already the newest version (0.46.1-2). python3-wheel set to manually installed. libgl-dev is already the newest version (1.7.0-1+b2). libgl-dev set to manually installed. libtsan2 is already the newest version (15.2.0-7). libtsan2 set to manually installed. libboost-timer1.83.0 is already the newest version (1.83.0-5). libboost-timer1.83.0 set to manually installed. libpng16-16t64 is already the newest version (1.6.50-1). libpng16-16t64 set to manually installed. libgav1-1 is already the newest version (0.19.0-3+b1). libgav1-1 set to manually installed. jq is already the newest version (1.8.1-4). jq set to manually installed. libssm2 is already the newest version (1.4.0-2+b3). libssm2 set to manually installed. libcloudproviders0 is already the newest version (0.3.6-3). libcloudproviders0 set to manually installed. comerr-dev is already the newest version (2.1-1.47.2-3+b3). comerr-dev set to manually installed. libxcb1 is already the newest version (1.17.0-2+b1). libxcb1 set to manually installed. xorg-sgml-doctools is already the newest version (1:1.11-1.1). xorg-sgml-doctools set to manually installed. libpython3-all-dev is already the newest version (3.13.7-1). libpython3-all-dev set to manually installed. bash is already the newest version (5.3-1). libgles2 is already the newest version (1.7.0-1+b2). libgles2 set to manually installed. libnghttp2-14 is already the newest version (1.64.0-1.1+b1). libnghttp2-14 set to manually installed. libboost-python-dev is already the newest version (1.83.0.2+b2). libboost-python-dev set to manually installed. hicolor-icon-theme is already the newest version (0.18-2). hicolor-icon-theme set to manually installed. libxi6 is already the newest version (2:1.8.2-1). libxi6 set to manually installed. dpkg-dev is already the newest version (1.22.21). dpkg-dev set to manually installed. libxcb-dri3-0 is already the newest version (1.17.0-2+b1). libxcb-dri3-0 set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. libgraphite2-3 is already the newest version (1.3.14-11). libgraphite2-3 set to manually installed. libucx0 is already the newest version (1.19.0+ds-1). libucx0 set to manually installed. python3-ordered-set is already the newest version (4.1.0-1). python3-ordered-set set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. python3-minimal is already the newest version (3.13.7-1). python3-minimal set to manually installed. libboost-chrono1.83-dev is already the newest version (1.83.0-5). libboost-chrono1.83-dev set to manually installed. g++-15-aarch64-linux-gnu is already the newest version (15.2.0-7). g++-15-aarch64-linux-gnu set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. krb5-multidev is already the newest version (1.21.3-5). krb5-multidev set to manually installed. libgtk-3-common is already the newest version (3.24.51-1). libgtk-3-common set to manually installed. libctf-nobfd0 is already the newest version (2.45-8). libctf-nobfd0 set to manually installed. liblzma5 is already the newest version (5.8.1-2). libgssapi-krb5-2 is already the newest version (1.21.3-5). libgssapi-krb5-2 set to manually installed. libwxgtk3.2-1t64 is already the newest version (3.2.8+dfsg-2). libwxgtk3.2-1t64 set to manually installed. libpixman-1-0 is already the newest version (0.46.4-1). libpixman-1-0 set to manually installed. base-passwd is already the newest version (3.6.7). python3-natsort is already the newest version (8.4.0-1). python3-natsort set to manually installed. python3-wxgtk4.0 is already the newest version (4.2.3+dfsg-2). python3-wxgtk4.0 set to manually installed. libann-cctbx0 is already the newest version (1.1.2+doc-9+b2). libann-cctbx0 set to manually installed. libfftw3-double3 is already the newest version (3.3.10-2+b1). libfftw3-double3 set to manually installed. libxrender1 is already the newest version (1:0.9.12-1). libxrender1 set to manually installed. libncursesw6 is already the newest version (6.5+20250216-2). libncursesw6 set to manually installed. unicode-data is already the newest version (16.0.0-1). unicode-data set to manually installed. libsvtav1enc2 is already the newest version (2.3.0+dfsg-1). libsvtav1enc2 set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). libhdf5-310 is already the newest version (1.14.5+repack-4). libhdf5-310 set to manually installed. python3-pymol is already the newest version (3.1.0+dfsg-1+b1). python3-pymol set to manually installed. python3-pyqt5.sip is already the newest version (12.17.1-1). python3-pyqt5.sip set to manually installed. libdebhelper-perl is already the newest version (13.28). libdebhelper-perl set to manually installed. libglu1-mesa is already the newest version (9.0.2-1.1+b3). libglu1-mesa set to manually installed. python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-5). libgmpxx4ldbl set to manually installed. libwayland-cursor0 is already the newest version (1.24.0-2+b1). libwayland-cursor0 set to manually installed. libxcomposite1 is already the newest version (1:0.4.6-1). libxcomposite1 set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6). python3-requests is already the newest version (2.32.5+dfsg-1). python3-requests set to manually installed. libxext6 is already the newest version (2:1.3.4-1+b3). libxext6 set to manually installed. hostname is already the newest version (3.25). libgl1-mesa-dri is already the newest version (25.2.5-1). libgl1-mesa-dri set to manually installed. libnuma1 is already the newest version (2.0.19-1). libnuma1 set to manually installed. dh-python is already the newest version (6.20250414). dh-python set to manually installed. libnotify4 is already the newest version (0.8.6-2). libnotify4 set to manually installed. libibmad5 is already the newest version (56.1-1+b1). libibmad5 set to manually installed. libngtcp2-crypto-ossl0 is already the newest version (1.16.0-1). libngtcp2-crypto-ossl0 set to manually installed. libattr1 is already the newest version (1:2.5.2-3). dwz is already the newest version (0.16-2). dwz set to manually installed. python3-all-dev is already the newest version (3.13.7-1). python3-all-dev set to manually installed. libboost-thread1.83.0 is already the newest version (1.83.0-5). libboost-thread1.83.0 set to manually installed. libcurl4t64 is already the newest version (8.17.0~rc2-1). libcurl4t64 set to manually installed. libwebp-dev is already the newest version (1.5.0-0.1). libwebp-dev set to manually installed. python3-freetype is already the newest version (2.5.1-2). python3-freetype set to manually installed. fftw2 is already the newest version (2.1.5-7+b1). fftw2 set to manually installed. python3-pluggy is already the newest version (1.6.0-1). python3-pluggy set to manually installed. python3-platformdirs is already the newest version (4.4.0-1). python3-platformdirs set to manually installed. libgomp1 is already the newest version (15.2.0-7). libgomp1 set to manually installed. python3.13-tk is already the newest version (3.13.9-1). python3.13-tk set to manually installed. libqt5network5t64 is already the newest version (5.15.17+dfsg-4). libqt5network5t64 set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. python3-fonttools is already the newest version (4.57.0-2). python3-fonttools set to manually installed. libxshmfence1 is already the newest version (1.3.3-1). libxshmfence1 set to manually installed. python3-pygments is already the newest version (2.18.0+dfsg-2). python3-pygments set to manually installed. libx11-dev is already the newest version (2:1.8.12-1). libx11-dev set to manually installed. python3-pyqt5.qtopengl is already the newest version (5.15.11+dfsg-3). python3-pyqt5.qtopengl set to manually installed. libpcre2-8-0 is already the newest version (10.46-1). libimagequant0 is already the newest version (4.4.0-3). libimagequant0 set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-10). libsasl2-modules-db set to manually installed. libeigen3-dev is already the newest version (3.4.0-5). libeigen3-dev set to manually installed. ca-certificates is already the newest version (20250419). ca-certificates set to manually installed. libpython3.13 is already the newest version (3.13.9-1). libpython3.13 set to manually installed. libopenjp2-7 is already the newest version (2.5.3-2.1). libopenjp2-7 set to manually installed. libyuv0 is already the newest version (0.0.1919.20250919-1). libyuv0 set to manually installed. python3-pyqt5 is already the newest version (5.15.11+dfsg-3). python3-pyqt5 set to manually installed. python3-flexcache is already the newest version (0.3-2). python3-flexcache set to manually installed. libglx0 is already the newest version (1.7.0-1+b2). libglx0 set to manually installed. libkeyutils1 is already the newest version (1.6.3-6). libkeyutils1 set to manually installed. libdouble-conversion3 is already the newest version (3.3.1-2). libdouble-conversion3 set to manually installed. login.defs is already the newest version (1:4.18.0-2). login.defs set to manually installed. libcurl4-openssl-dev is already the newest version (8.17.0~rc2-1). libcurl4-openssl-dev set to manually installed. python3-six is already the newest version (1.17.0-1). python3-six set to manually installed. libqt5opengl5t64 is already the newest version (5.15.17+dfsg-4). libqt5opengl5t64 set to manually installed. libboost-system1.83-dev is already the newest version (1.83.0-5). libboost-system1.83-dev set to manually installed. libz3-4 is already the newest version (4.13.3-1). libz3-4 set to manually installed. dh-exec is already the newest version (0.30+b1). dh-exec set to manually installed. hdf5-helpers is already the newest version (1.14.5+repack-4). hdf5-helpers set to manually installed. xz-utils is already the newest version (5.8.1-2). xz-utils set to manually installed. libxau6 is already the newest version (1:1.0.11-1). libxau6 set to manually installed. python3.13-dev is already the newest version (3.13.9-1). python3.13-dev set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. libicu76 is already the newest version (76.1-4). libicu76 set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. sphinx-rtd-theme-common is already the newest version (3.0.2+dfsg-3). sphinx-rtd-theme-common set to manually installed. automake is already the newest version (1:1.18.1-2). automake set to manually installed. libperl5.40 is already the newest version (5.40.1-6). libperl5.40 set to manually installed. libcrypt-dev is already the newest version (1:4.4.38-1). libcrypt-dev set to manually installed. tzdata is already the newest version (2025b-5). tzdata set to manually installed. groff-base is already the newest version (1.23.0-9). groff-base set to manually installed. libibverbs1 is already the newest version (56.1-1+b1). libibverbs1 set to manually installed. procps is already the newest version (2:4.0.4-9). procps set to manually installed. libnetcdf22 is already the newest version (1:4.9.3-1+b1). libnetcdf22 set to manually installed. at-spi2-common is already the newest version (2.58.1-1). at-spi2-common set to manually installed. libpcre2-32-0 is already the newest version (10.46-1). libpcre2-32-0 set to manually installed. python3-jaraco.context is already the newest version (6.0.1-1). python3-jaraco.context set to manually installed. libkrb5-3 is already the newest version (1.21.3-5). libkrb5-3 set to manually installed. libdebconfclient0 is already the newest version (0.280). libxxf86vm1 is already the newest version (1:1.1.4-1+b4). libxxf86vm1 set to manually installed. libqt5printsupport5t64 is already the newest version (5.15.17+dfsg-4). libqt5printsupport5t64 set to manually installed. python3-cairo is already the newest version (1.27.0-2). python3-cairo set to manually installed. python3-pil.imagetk is already the newest version (12.0.0-1). python3-pil.imagetk set to manually installed. libevent-pthreads-2.1-7t64 is already the newest version (2.1.12-stable-10+b1). libevent-pthreads-2.1-7t64 set to manually installed. libmount1 is already the newest version (2.41.2-4). libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. libfftw3-long3 is already the newest version (3.3.10-2+b1). libfftw3-long3 set to manually installed. libhsa-runtime64-1 is already the newest version (6.1.2-3). libhsa-runtime64-1 set to manually installed. g++ is already the newest version (4:15.2.0-4). g++ set to manually installed. python3-lxml is already the newest version (6.0.2-1). python3-lxml set to manually installed. python3-h5py is already the newest version (3.14.0-3). python3-h5py set to manually installed. perl is already the newest version (5.40.1-6). perl set to manually installed. libevent-core-2.1-7t64 is already the newest version (2.1.12-stable-10+b1). libevent-core-2.1-7t64 set to manually installed. python3-packaging is already the newest version (25.0-1). python3-packaging set to manually installed. libboost-thread-dev is already the newest version (1.83.0.2+b2). libboost-thread-dev set to manually installed. libhdf5-hl-fortran-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-fortran-310 set to manually installed. libxfixes3 is already the newest version (1:6.0.0-2+b4). libxfixes3 set to manually installed. libnettle8t64 is already the newest version (3.10.2-1). libnettle8t64 set to manually installed. libkadm5clnt-mit12 is already the newest version (1.21.3-5). libkadm5clnt-mit12 set to manually installed. python3-sympy is already the newest version (1.14.0-2). python3-sympy set to manually installed. libcbf-dev is already the newest version (0.9.7+dfsg1-5.1). libcbf-dev set to manually installed. libfreetype6 is already the newest version (2.13.3+dfsg-1). libfreetype6 set to manually installed. ncurses-bin is already the newest version (6.5+20250216-2). libgdk-pixbuf-2.0-0 is already the newest version (2.44.4+dfsg-1). libgdk-pixbuf-2.0-0 set to manually installed. python3-autocommand is already the newest version (2.2.2-3). python3-autocommand set to manually installed. gcc-14-base is already the newest version (14.3.0-10). gcc-14-base set to manually installed. python3-reportlab is already the newest version (4.4.4-2). python3-reportlab set to manually installed. libcbf1t64 is already the newest version (0.9.7+dfsg1-5.1). libcbf1t64 set to manually installed. python3-opengl is already the newest version (3.1.10+dfsg-1). python3-opengl set to manually installed. python3-h5py-serial is already the newest version (3.14.0-3). python3-h5py-serial set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1+b1). rpcsvc-proto set to manually installed. python3-hdf5plugin is already the newest version (5.1.0-1). python3-hdf5plugin set to manually installed. libsemanage2 is already the newest version (3.9-1). libsemanage2 set to manually installed. libabsl20240722 is already the newest version (20240722.0-4). libabsl20240722 set to manually installed. libpmix2t64 is already the newest version (6.0.0+really5.0.8-1). libpmix2t64 set to manually installed. fonts-font-awesome is already the newest version (5.0.10+really4.7.0~dfsg-4.1). fonts-font-awesome set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. libidn2-0 is already the newest version (2.3.8-4). libidn2-0 set to manually installed. libssl-dev is already the newest version (3.5.4-1). libssl-dev set to manually installed. libegl-mesa0 is already the newest version (25.2.5-1). libegl-mesa0 set to manually installed. libboost1.83-dev is already the newest version (1.83.0-5). libboost1.83-dev set to manually installed. libpango-1.0-0 is already the newest version (1.56.3-2). libpango-1.0-0 set to manually installed. libitm1 is already the newest version (15.2.0-7). libitm1 set to manually installed. libxcb-image0 is already the newest version (0.4.0-2+b2). libxcb-image0 set to manually installed. libpam0g is already the newest version (1.7.0-5). libkadm5srv-mit12 is already the newest version (1.21.3-5). libkadm5srv-mit12 set to manually installed. liblz4-dev is already the newest version (1.10.0-4). liblz4-dev set to manually installed. libaom3 is already the newest version (3.13.1-1). libaom3 set to manually installed. libxcb-sync1 is already the newest version (1.17.0-2+b1). libxcb-sync1 set to manually installed. libssm-dev is already the newest version (1.4.0-2+b3). libssm-dev set to manually installed. libcap2 is already the newest version (1:2.75-10+b1). libxcb-render-util0 is already the newest version (0.3.10-1). libxcb-render-util0 set to manually installed. openssl-provider-legacy is already the newest version (3.5.4-1). libepoxy0 is already the newest version (1.5.10-2). libepoxy0 set to manually installed. libglew2.2 is already the newest version (2.2.0-4+b2). libglew2.2 set to manually installed. libsensors-config is already the newest version (1:3.6.2-2). libsensors-config set to manually installed. xml-core is already the newest version (0.19). xml-core set to manually installed. make is already the newest version (4.4.1-2). make set to manually installed. python3-dateutil is already the newest version (2.9.0-4). python3-dateutil set to manually installed. po-debconf is already the newest version (1.0.21+nmu1). po-debconf set to manually installed. libubsan1 is already the newest version (15.2.0-7). libubsan1 set to manually installed. libdatrie1 is already the newest version (0.2.13-4). libdatrie1 set to manually installed. libedit2 is already the newest version (3.1-20250104-1). libedit2 set to manually installed. python3-typeguard is already the newest version (4.4.4-1). python3-typeguard set to manually installed. libcrypt1 is already the newest version (1:4.4.38-1). libqt5test5t64 is already the newest version (5.15.17+dfsg-4). libqt5test5t64 set to manually installed. libaec-dev is already the newest version (1.1.4-2). libaec-dev set to manually installed. libmd0 is already the newest version (1.1.0-2+b1). libmmdb2-dev is already the newest version (2.0.22-1+b2). libmmdb2-dev set to manually installed. libzstd1 is already the newest version (1.5.7+dfsg-2). libsensors5 is already the newest version (1:3.6.2-2). libsensors5 set to manually installed. libdrm2 is already the newest version (2.4.127-1). libdrm2 set to manually installed. libatspi2.0-0t64 is already the newest version (2.58.1-1). libatspi2.0-0t64 set to manually installed. libk5crypto3 is already the newest version (1.21.3-5). libk5crypto3 set to manually installed. gzip is already the newest version (1.13-1). libsqlite3-0 is already the newest version (3.46.1-8). libsqlite3-0 set to manually installed. libsz2 is already the newest version (1.1.4-2). libsz2 set to manually installed. libbinutils is already the newest version (2.45-8). libbinutils set to manually installed. scons is already the newest version (4.8.1+dfsg-1). scons set to manually installed. libboost-timer-dev is already the newest version (1.83.0.2+b2). libboost-timer-dev set to manually installed. python3-lz4 is already the newest version (4.4.4+dfsg-3). python3-lz4 set to manually installed. libxml2-16 is already the newest version (2.15.1+dfsg-0.2). libxml2-16 set to manually installed. binutils-aarch64-linux-gnu is already the newest version (2.45-8). binutils-aarch64-linux-gnu set to manually installed. rsync is already the newest version (3.4.1+ds1-6). rsync set to manually installed. adduser is already the newest version (3.153). adduser set to manually installed. libantlr3c-dev is already the newest version (3.4+dfsg-4+b2). libantlr3c-dev set to manually installed. libglx-mesa0 is already the newest version (25.2.5-1). libglx-mesa0 set to manually installed. libmunge2 is already the newest version (0.5.16-1). libmunge2 set to manually installed. librdmacm1t64 is already the newest version (56.1-1+b1). librdmacm1t64 set to manually installed. libwacom9 is already the newest version (2.16.1-1). libwacom9 set to manually installed. debconf is already the newest version (1.5.91). libfftw3-bin is already the newest version (3.3.10-2+b1). libfftw3-bin set to manually installed. libxxhash0 is already the newest version (0.8.3-2). libxxhash0 set to manually installed. sfftw-dev is already the newest version (2.1.5-7+b1). sfftw-dev set to manually installed. libudev1 is already the newest version (258.1-1). libpangocairo-1.0-0 is already the newest version (1.56.3-2). libpangocairo-1.0-0 set to manually installed. libtiff-dev is already the newest version (4.7.1-1). libtiff-dev set to manually installed. libngtcp2-dev is already the newest version (1.16.0-1). libngtcp2-dev set to manually installed. python3-procrunner is already the newest version (2.3.3-2). python3-procrunner set to manually installed. libnghttp3-9 is already the newest version (1.12.0-1). libnghttp3-9 set to manually installed. libegl1 is already the newest version (1.7.0-1+b2). libegl1 set to manually installed. init-system-helpers is already the newest version (1.69). libxcb1-dev is already the newest version (1.17.0-2+b1). libxcb1-dev set to manually installed. libboost-atomic1.83.0 is already the newest version (1.83.0-5). libboost-atomic1.83.0 set to manually installed. libxcb-keysyms1 is already the newest version (0.4.1-1). libxcb-keysyms1 set to manually installed. nettle-dev is already the newest version (3.10.2-1). nettle-dev set to manually installed. libjbig-dev is already the newest version (2.1-6.1+b2). libjbig-dev set to manually installed. systemd is already the newest version (258.1-1). systemd set to manually installed. libxcb-xfixes0 is already the newest version (1.17.0-2+b1). libxcb-xfixes0 set to manually installed. libsmartcols1 is already the newest version (2.41.2-4). passwd is already the newest version (1:4.18.0-2). passwd set to manually installed. dpkg is already the newest version (1.22.21). gcc is already the newest version (4:15.2.0-4). gcc set to manually installed. libboost-date-time1.83.0 is already the newest version (1.83.0-5). libboost-date-time1.83.0 set to manually installed. libsystemd0 is already the newest version (258.1-1). python3-typing-extensions is already the newest version (4.15.0-1). python3-typing-extensions set to manually installed. libdav1d7 is already the newest version (1.5.1-1). libdav1d7 set to manually installed. libccp4-data is already the newest version (8.0.0-5). libccp4-data set to manually installed. fonts-lyx is already the newest version (2.4.4-2). fonts-lyx set to manually installed. libcairo2 is already the newest version (1.18.4-1+b1). libcairo2 set to manually installed. architecture-properties is already the newest version (0.2.6). architecture-properties set to manually installed. libfuse3-4 is already the newest version (3.17.4-1). libfuse3-4 set to manually installed. liblapack3 is already the newest version (3.12.1-7). liblapack3 set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-2). libzstd-dev set to manually installed. libwacom-common is already the newest version (2.16.1-1). libwacom-common set to manually installed. libpcre2-16-0 is already the newest version (10.46-1). libpcre2-16-0 set to manually installed. libp11-kit0 is already the newest version (0.25.9-2). libp11-kit0 set to manually installed. libxkbcommon0 is already the newest version (1.7.0-2.1). libxkbcommon0 set to manually installed. dash is already the newest version (0.5.12-12). libqt5designer5 is already the newest version (5.15.17-3). libqt5designer5 set to manually installed. libboost-timer1.83-dev is already the newest version (1.83.0-5). libboost-timer1.83-dev set to manually installed. liblzma-dev is already the newest version (5.8.1-2). liblzma-dev set to manually installed. libfribidi0 is already the newest version (1.0.16-3). libfribidi0 set to manually installed. libtool is already the newest version (2.5.4-7). libtool set to manually installed. libuchardet0 is already the newest version (0.0.8-2). libuchardet0 set to manually installed. libxrandr2 is already the newest version (2:1.5.4-1+b3). libxrandr2 set to manually installed. libqt5xml5t64 is already the newest version (5.15.17+dfsg-4). libqt5xml5t64 set to manually installed. pymol-data is already the newest version (3.1.0+dfsg-1). pymol-data set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libinput10 is already the newest version (1.28.1-1). libinput10 set to manually installed. libjs-jquery is already the newest version (3.7.1+dfsg+~3.5.33-1). libjs-jquery set to manually installed. libboost-numpy1.83-dev is already the newest version (1.83.0-5). libboost-numpy1.83-dev set to manually installed. libmpfr6 is already the newest version (4.2.2-2). libmpfr6 set to manually installed. libsharpyuv-dev is already the newest version (1.5.0-0.1). libsharpyuv-dev set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. libclipper2 is already the newest version (2.1.20201109-2+b3). libclipper2 set to manually installed. libpam-runtime is already the newest version (1.7.0-5). libhsakmt1 is already the newest version (6.2.4+ds-1). libhsakmt1 set to manually installed. libssh2-1t64 is already the newest version (1.11.1-1). libssh2-1t64 set to manually installed. libhwasan0 is already the newest version (15.2.0-7). libhwasan0 set to manually installed. libboost-system1.83.0 is already the newest version (1.83.0-5). libboost-system1.83.0 set to manually installed. libfontenc1 is already the newest version (1:1.1.8-1+b2). libfontenc1 set to manually installed. libsframe2 is already the newest version (2.45-8). libsframe2 set to manually installed. python3-legacy-cgi is already the newest version (2.6.3-1). python3-legacy-cgi set to manually installed. cpp-15 is already the newest version (15.2.0-7). cpp-15 set to manually installed. readline-common is already the newest version (8.3-3). readline-common set to manually installed. liblsan0 is already the newest version (15.2.0-7). liblsan0 set to manually installed. libssh2-1-dev is already the newest version (1.11.1-1). libssh2-1-dev set to manually installed. libp11-kit-dev is already the newest version (0.25.9-2). libp11-kit-dev set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. libdconf1 is already the newest version (0.49.0-1). libdconf1 set to manually installed. libxslt1.1 is already the newest version (1.1.43-0.3). libxslt1.1 set to manually installed. liblcms2-2 is already the newest version (2.16-2). liblcms2-2 set to manually installed. mawk is already the newest version (1.3.4.20250131-1). libgtk-3-0t64 is already the newest version (3.24.51-1). libgtk-3-0t64 set to manually installed. python-matplotlib-data is already the newest version (3.10.7+dfsg1-1). python-matplotlib-data set to manually installed. libgdk-pixbuf2.0-common is already the newest version (2.44.4+dfsg-1). libgdk-pixbuf2.0-common set to manually installed. libselinux1 is already the newest version (3.9-2). libdeflate-dev is already the newest version (1.23-2). libdeflate-dev set to manually installed. pkgconf is already the newest version (1.8.1-4). pkgconf set to manually installed. python3-contourpy is already the newest version (1.3.1-2). python3-contourpy set to manually installed. libtcl8.6 is already the newest version (8.6.17+dfsg-1). libtcl8.6 set to manually installed. libwxbase3.2-1t64 is already the newest version (3.2.8+dfsg-2). libwxbase3.2-1t64 set to manually installed. libwebp7 is already the newest version (1.5.0-0.1). libwebp7 set to manually installed. w3c-sgml-lib is already the newest version (1.3-3). w3c-sgml-lib set to manually installed. librav1e0.8 is already the newest version (0.8.1-5). librav1e0.8 set to manually installed. libhdf5-fortran-310 is already the newest version (1.14.5+repack-4). libhdf5-fortran-310 set to manually installed. libtasn1-6-dev is already the newest version (4.20.0-2). libtasn1-6-dev set to manually installed. libdrm-amdgpu1 is already the newest version (2.4.127-1). libdrm-amdgpu1 set to manually installed. libantlr3c-3.4-0 is already the newest version (3.4+dfsg-4+b2). libantlr3c-3.4-0 set to manually installed. libxdmcp6 is already the newest version (1:1.1.5-1). libxdmcp6 set to manually installed. python3-pil is already the newest version (12.0.0-1). python3-pil set to manually installed. python3-iniconfig is already the newest version (2.1.0-1). python3-iniconfig set to manually installed. python3-tqdm is already the newest version (4.67.1-6). python3-tqdm set to manually installed. libqt5dbus5t64 is already the newest version (5.15.17+dfsg-4). libqt5dbus5t64 set to manually installed. libpciaccess0 is already the newest version (0.17-3+b3). libpciaccess0 set to manually installed. libgnutls28-dev is already the newest version (3.8.10-2). libgnutls28-dev set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. liblerc4 is already the newest version (4.0.0+ds-5). liblerc4 set to manually installed. libice6 is already the newest version (2:1.1.1-1). libice6 set to manually installed. libjbig0 is already the newest version (2.1-6.1+b2). libjbig0 set to manually installed. python3-chardet is already the newest version (5.2.0+dfsg-2). python3-chardet set to manually installed. perl-base is already the newest version (5.40.1-6). libaec0 is already the newest version (1.1.4-2). libaec0 set to manually installed. systemd-sysv is already the newest version (258.1-1). systemd-sysv set to manually installed. libnl-3-200 is already the newest version (3.11.0-2). libnl-3-200 set to manually installed. libpython3.13-stdlib is already the newest version (3.13.9-1). libpython3.13-stdlib set to manually installed. libnghttp2-dev is already the newest version (1.64.0-1.1+b1). libnghttp2-dev set to manually installed. libproc2-0 is already the newest version (2:4.0.4-9). libproc2-0 set to manually installed. python3-pytest is already the newest version (8.4.2-1). python3-pytest set to manually installed. libqt5help5 is already the newest version (5.15.17-3). libqt5help5 set to manually installed. python3-attr is already the newest version (25.4.0-1). python3-attr set to manually installed. ibverbs-providers is already the newest version (56.1-1+b1). ibverbs-providers set to manually installed. libcolord2 is already the newest version (1.4.8-1). libcolord2 set to manually installed. libgprofng0 is already the newest version (2.45-8). libgprofng0 set to manually installed. libxau-dev is already the newest version (1:1.0.11-1). libxau-dev set to manually installed. libxdamage1 is already the newest version (1:1.1.6-1+b2). libxdamage1 set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). zlib1g-dev set to manually installed. libharfbuzz0b is already the newest version (12.1.0-1). libharfbuzz0b set to manually installed. libboost-date-time1.83-dev is already the newest version (1.83.0-5). libboost-date-time1.83-dev set to manually installed. libxcb-xinerama0 is already the newest version (1.17.0-2+b1). libxcb-xinerama0 set to manually installed. ncurses-base is already the newest version (6.5+20250216-2). python3-charset-normalizer is already the newest version (3.4.3-1). python3-charset-normalizer set to manually installed. python3-pint is already the newest version (0.25-1). python3-pint set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-10). libsasl2-2 set to manually installed. libavahi-common-data is already the newest version (0.8-17). libavahi-common-data set to manually installed. shared-mime-info is already the newest version (2.4-5+b3). shared-mime-info set to manually installed. dconf-gsettings-backend is already the newest version (0.49.0-1). dconf-gsettings-backend set to manually installed. dbus-system-bus-common is already the newest version (1.16.2-2). dbus-system-bus-common set to manually installed. gcc-15-aarch64-linux-gnu is already the newest version (15.2.0-7). gcc-15-aarch64-linux-gnu set to manually installed. libamdhip64-5 is already the newest version (5.7.1-7). libamdhip64-5 set to manually installed. libkrb5-dev is already the newest version (1.21.3-5). libkrb5-dev set to manually installed. libpsl5t64 is already the newest version (0.21.2-1.1+b1). libpsl5t64 set to manually installed. libgudev-1.0-0 is already the newest version (238-7). libgudev-1.0-0 set to manually installed. cpp-15-aarch64-linux-gnu is already the newest version (15.2.0-7). cpp-15-aarch64-linux-gnu set to manually installed. libboost-atomic1.83-dev is already the newest version (1.83.0-5). libboost-atomic1.83-dev set to manually installed. mesa-libgallium is already the newest version (25.2.5-1). mesa-libgallium set to manually installed. libpython3.13-dev is already the newest version (3.13.9-1). libpython3.13-dev set to manually installed. fonts-dejavu-core is already the newest version (2.37-8). fonts-dejavu-core set to manually installed. libc6-dev is already the newest version (2.41-12). libc6-dev set to manually installed. linux-libc-dev is already the newest version (6.16.12-2). linux-libc-dev set to manually installed. python3-ufolib2 is already the newest version (0.17.1+dfsg1-1). python3-ufolib2 set to manually installed. libglu1-mesa-dev is already the newest version (9.0.2-1.1+b3). libglu1-mesa-dev set to manually installed. liblz4-1 is already the newest version (1.10.0-4). liblz4-1 set to manually installed. libpipeline1 is already the newest version (1.5.8-1). libpipeline1 set to manually installed. libfftw3-dev is already the newest version (3.3.10-2+b1). libfftw3-dev set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). dbus-user-session is already the newest version (1.16.2-2). dbus-user-session set to manually installed. libcc1-0 is already the newest version (15.2.0-7). libcc1-0 set to manually installed. python3-urllib3 is already the newest version (2.5.0-1). python3-urllib3 set to manually installed. findutils is already the newest version (4.10.0-3). gcc-15 is already the newest version (15.2.0-7). gcc-15 set to manually installed. python3-brotli is already the newest version (1.1.0-2+b7). python3-brotli set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-10). libsm6 is already the newest version (2:1.2.6-1). libsm6 set to manually installed. libthai0 is already the newest version (0.1.29-2+b1). libthai0 set to manually installed. python3-msgpack is already the newest version (1.0.3-3+b5). python3-msgpack set to manually installed. libibumad3 is already the newest version (56.1-1+b1). libibumad3 set to manually installed. libxcb-util1 is already the newest version (0.4.1-1). libxcb-util1 set to manually installed. libwxgtk-gl3.2-1t64 is already the newest version (3.2.8+dfsg-2). libwxgtk-gl3.2-1t64 set to manually installed. libgnutls-dane0t64 is already the newest version (3.8.10-2). libgnutls-dane0t64 set to manually installed. g++-aarch64-linux-gnu is already the newest version (4:15.2.0-4). g++-aarch64-linux-gnu set to manually installed. binutils-common is already the newest version (2.45-8). binutils-common set to manually installed. libxcb-shape0 is already the newest version (1.17.0-2+b1). libxcb-shape0 set to manually installed. libglx-dev is already the newest version (1.7.0-1+b2). libglx-dev set to manually installed. fonts-dejavu-mono is already the newest version (2.37-8). fonts-dejavu-mono set to manually installed. libwebpdecoder3 is already the newest version (1.5.0-0.1). libwebpdecoder3 set to manually installed. libxcb-xinput0 is already the newest version (1.17.0-2+b1). libxcb-xinput0 set to manually installed. libhwloc15 is already the newest version (2.12.2-1). libhwloc15 set to manually installed. librtmp-dev is already the newest version (2.4+20151223.gitfa8646d.1-3). librtmp-dev set to manually installed. python3-rlpycairo is already the newest version (0.3.0-4). python3-rlpycairo set to manually installed. libxcb-xkb1 is already the newest version (1.17.0-2+b1). libxcb-xkb1 set to manually installed. libx11-data is already the newest version (2:1.8.12-1). libx11-data set to manually installed. libexpat1-dev is already the newest version (2.7.3-1). libexpat1-dev set to manually installed. libopenmpi40 is already the newest version (5.0.8-10+b1). libopenmpi40 set to manually installed. libhdf5-hl-cpp-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-cpp-310 set to manually installed. libldap2 is already the newest version (2.6.10+dfsg-1). libldap2 set to manually installed. libpython3-dev is already the newest version (3.13.7-1). libpython3-dev set to manually installed. libstdc++6 is already the newest version (15.2.0-7). libstdc++6 set to manually installed. libelf1t64 is already the newest version (0.193-3). libelf1t64 set to manually installed. tk8.6-blt2.5 is already the newest version (2.5.3+dfsg-8). tk8.6-blt2.5 set to manually installed. python3-zopfli is already the newest version (0.2.3.post1-1). python3-zopfli set to manually installed. libseccomp2 is already the newest version (2.6.0-2). libseccomp2 set to manually installed. sgml-base is already the newest version (1.31+nmu1). sgml-base set to manually installed. libuuid1 is already the newest version (2.41.2-4). autopoint is already the newest version (0.23.1-2). autopoint set to manually installed. libnghttp3-dev is already the newest version (1.12.0-1). libnghttp3-dev set to manually installed. libasan8 is already the newest version (15.2.0-7). libasan8 set to manually installed. libvulkan1 is already the newest version (1.4.321.0-1). libvulkan1 set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. libsemanage-common is already the newest version (3.9-1). libsemanage-common set to manually installed. libsharpyuv0 is already the newest version (1.5.0-0.1). libsharpyuv0 set to manually installed. coreutils is already the newest version (9.7-3). libmtdev1t64 is already the newest version (1.1.7-1). libmtdev1t64 set to manually installed. libsystemd-shared is already the newest version (258.1-1). libsystemd-shared set to manually installed. dbus is already the newest version (1.16.2-2). dbus set to manually installed. libapparmor1 is already the newest version (4.1.0-1). libapparmor1 set to manually installed. mount is already the newest version (2.41.2-4). mount set to manually installed. gettext is already the newest version (0.23.1-2+b1). gettext set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-7). libstdc++-15-dev set to manually installed. libgdbm6t64 is already the newest version (1.26-1). libgdbm6t64 set to manually installed. libzopfli1 is already the newest version (1.0.3-3). libzopfli1 set to manually installed. python3 is already the newest version (3.13.7-1). python3 set to manually installed. python3-tk is already the newest version (3.13.9-1). python3-tk set to manually installed. python3.13-minimal is already the newest version (3.13.9-1). python3.13-minimal set to manually installed. x11proto-dev is already the newest version (2024.1-1). x11proto-dev set to manually installed. gcc-aarch64-linux-gnu is already the newest version (4:15.2.0-4). gcc-aarch64-linux-gnu set to manually installed. libqt5gui5t64 is already the newest version (5.15.17+dfsg-4). libqt5gui5t64 set to manually installed. python3-all is already the newest version (3.13.7-1). python3-all set to manually installed. ocl-icd-libopencl1 is already the newest version (2.3.4-1). ocl-icd-libopencl1 set to manually installed. libdpkg-perl is already the newest version (1.22.21). libdpkg-perl set to manually installed. libatomic1 is already the newest version (15.2.0-7). libatomic1 set to manually installed. libclipper-dev is already the newest version (2.1.20201109-2+b3). libclipper-dev set to manually installed. libopengl-dev is already the newest version (1.7.0-1+b2). libopengl-dev set to manually installed. libllvm19 is already the newest version (1:19.1.7-7). libllvm19 set to manually installed. libsepol2 is already the newest version (3.9-2). libsepol2 set to manually installed. libccp4f0t64 is already the newest version (8.0.0-5). libccp4f0t64 set to manually installed. libcairo-gobject2 is already the newest version (1.18.4-1+b1). libcairo-gobject2 set to manually installed. gettext-base is already the newest version (0.23.1-2+b1). gettext-base set to manually installed. dconf-service is already the newest version (0.49.0-1). dconf-service set to manually installed. libaudit1 is already the newest version (1:4.1.2-1). libhdf5-hl-310 is already the newest version (1.14.5+repack-4). libhdf5-hl-310 set to manually installed. libxtst6 is already the newest version (2:1.2.5-1). libxtst6 set to manually installed. libldap-dev is already the newest version (2.6.10+dfsg-1). libldap-dev set to manually installed. libxcb-icccm4 is already the newest version (0.4.2-1). libxcb-icccm4 set to manually installed. libhdf5-dev is already the newest version (1.14.5+repack-4). libhdf5-dev set to manually installed. libavahi-common3 is already the newest version (0.8-17). libavahi-common3 set to manually installed. cpp is already the newest version (4:15.2.0-4). cpp set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1). libgdbm-compat4t64 set to manually installed. python3-kiwisolver is already the newest version (1.4.10~rc0-1). python3-kiwisolver set to manually installed. bsdextrautils is already the newest version (2.41.2-4). bsdextrautils set to manually installed. libgpg-error0 is already the newest version (1.56-2). libgpg-error0 set to manually installed. libkdb5-10t64 is already the newest version (1.21.3-5). libkdb5-10t64 set to manually installed. libonig5 is already the newest version (6.9.10-1). libonig5 set to manually installed. python3-dev is already the newest version (3.13.7-1). python3-dev set to manually installed. libjq1 is already the newest version (1.8.1-4). libjq1 set to manually installed. libtiff6 is already the newest version (4.7.1-1). libtiff6 set to manually installed. libxxhash-dev is already the newest version (0.8.3-2). libxxhash-dev set to manually installed. libatk1.0-0t64 is already the newest version (2.58.1-1). libatk1.0-0t64 set to manually installed. sfftw2 is already the newest version (2.1.5-7+b1). sfftw2 set to manually installed. libgcc-14-dev is already the newest version (14.3.0-10). libgcc-14-dev set to manually installed. libx11-xcb1 is already the newest version (2:1.8.12-1). libx11-xcb1 set to manually installed. dbus-daemon is already the newest version (1.16.2-2). dbus-daemon set to manually installed. libfontconfig1 is already the newest version (2.15.0-2.4). libfontconfig1 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. fontconfig is already the newest version (2.15.0-2.4). fontconfig set to manually installed. libxkbcommon-x11-0 is already the newest version (1.7.0-2.1). libxkbcommon-x11-0 set to manually installed. libcurl3t64-gnutls is already the newest version (8.17.0~rc2-1). libcurl3t64-gnutls set to manually installed. libpam-modules is already the newest version (1.7.0-5). libtk8.6 is already the newest version (8.6.17-1). libtk8.6 set to manually installed. libatk-bridge2.0-0t64 is already the newest version (2.58.1-1). libatk-bridge2.0-0t64 set to manually installed. libqt5widgets5t64 is already the newest version (5.15.17+dfsg-4). libqt5widgets5t64 set to manually installed. bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. cpp-aarch64-linux-gnu is already the newest version (4:15.2.0-4). cpp-aarch64-linux-gnu set to manually installed. xtrans-dev is already the newest version (1.6.0-1). xtrans-dev set to manually installed. libgnutls-openssl27t64 is already the newest version (3.8.10-2). libgnutls-openssl27t64 set to manually installed. libpam-systemd is already the newest version (258.1-1). libpam-systemd set to manually installed. python3-scipy is already the newest version (1.16.2-3). python3-scipy set to manually installed. libkrb5support0 is already the newest version (1.21.3-5). libkrb5support0 set to manually installed. libc6 is already the newest version (2.41-12). pybind11-dev is already the newest version (3.0.1-2). pybind11-dev set to manually installed. dbus-bin is already the newest version (1.16.2-2). dbus-bin set to manually installed. libxcb-shm0 is already the newest version (1.17.0-2+b1). libxcb-shm0 set to manually installed. libqt5sql5t64 is already the newest version (5.15.17+dfsg-4). libqt5sql5t64 set to manually installed. libjs-sphinxdoc is already the newest version (8.2.3-8). libjs-sphinxdoc set to manually installed. python3-flexparser is already the newest version (0.4-1). python3-flexparser set to manually installed. libboost-serialization1.83-dev is already the newest version (1.83.0-5). libboost-serialization1.83-dev set to manually installed. dh-autoreconf is already the newest version (21). dh-autoreconf set to manually installed. libhwloc-plugins is already the newest version (2.12.2-1). libhwloc-plugins set to manually installed. libccp4c0t64 is already the newest version (8.0.0-5). libccp4c0t64 set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-4). libjpeg62-turbo-dev set to manually installed. python3-numpy-dev is already the newest version (1:2.3.3+ds-3). python3-numpy-dev set to manually installed. fonts-urw-base35 is already the newest version (20200910-8). fonts-urw-base35 set to manually installed. libboost-python1.83.0 is already the newest version (1.83.0-5). libboost-python1.83.0 set to manually installed. libamd-comgr2 is already the newest version (6.0+git20231212.4510c28+dfsg-3+b2). libamd-comgr2 set to manually installed. libbsd0 is already the newest version (0.12.2-2). libbsd0 set to manually installed. libidn2-dev is already the newest version (2.3.8-4). libidn2-dev set to manually installed. libcups2t64 is already the newest version (2.4.14-1). libcups2t64 set to manually installed. libtiffxx6 is already the newest version (4.7.1-1). libtiffxx6 set to manually installed. libfftw3-single3 is already the newest version (3.3.10-2+b1). libfftw3-single3 set to manually installed. xfonts-encodings is already the newest version (1:1.0.4-2.2). xfonts-encodings set to manually installed. libngtcp2-16 is already the newest version (1.16.0-1). libngtcp2-16 set to manually installed. libglvnd0 is already the newest version (1.7.0-1+b2). libglvnd0 set to manually installed. python3-mpmath is already the newest version (1.3.0-2). python3-mpmath set to manually installed. libctf0 is already the newest version (2.45-8). libctf0 set to manually installed. libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b1). libevent-2.1-7t64 set to manually installed. liblzf1 is already the newest version (3.6-4+b3). liblzf1 set to manually installed. sysvinit-utils is already the newest version (3.15-5). libglib2.0-0t64 is already the newest version (2.86.1-1). libglib2.0-0t64 set to manually installed. libpsl-dev is already the newest version (0.21.2-1.1+b1). libpsl-dev set to manually installed. g++-15 is already the newest version (15.2.0-7). g++-15 set to manually installed. liblerc-dev is already the newest version (4.0.0+ds-5). liblerc-dev set to manually installed. libx11-6 is already the newest version (2:1.8.12-1). libx11-6 set to manually installed. python3.13 is already the newest version (3.13.9-1). python3.13 set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5). libffi8 is already the newest version (3.5.2-2). libffi8 set to manually installed. xfonts-utils is already the newest version (1:7.7+7). xfonts-utils set to manually installed. libexpat1 is already the newest version (2.7.3-1). libexpat1 set to manually installed. libreadline8t64 is already the newest version (8.3-3). libreadline8t64 set to manually installed. libpangoft2-1.0-0 is already the newest version (1.56.3-2). libpangoft2-1.0-0 set to manually installed. librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-3). librtmp1 set to manually installed. debianutils is already the newest version (5.23.2). libblas3 is already the newest version (3.12.1-7). libblas3 set to manually installed. util-linux is already the newest version (2.41.2-4). dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. libmd4c0 is already the newest version (0.5.2-2+b1). libmd4c0 set to manually installed. libgcc-15-dev is already the newest version (15.2.0-7). libgcc-15-dev set to manually installed. dbus-session-bus-common is already the newest version (1.16.2-2). dbus-session-bus-common set to manually installed. libqt5core5t64 is already the newest version (5.15.17+dfsg-4). libqt5core5t64 set to manually installed. libgcrypt20 is already the newest version (1.11.2-2). libgcrypt20 set to manually installed. fonts-lato is already the newest version (2.015-1). fonts-lato set to manually installed. python3-mrcfile is already the newest version (1.5.4-2). python3-mrcfile set to manually installed. libfabric1 is already the newest version (2.1.0-1.1). libfabric1 set to manually installed. python3-pyparsing is already the newest version (3.1.3-1). python3-pyparsing set to manually installed. libxft2 is already the newest version (2.3.6-1+b4). libxft2 set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.fJn9abd5i_ (Reading database ... 63901 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.fJn9abd5i_ I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.fJn9abd5i_ I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.fJn9abd5i_... I: success in 245.1142 seconds Downloading dependency 635 of 641: libqt5core5t64:arm64=5.15.17+dfsg-4 Downloading dependency 636 of 641: libgcrypt20:arm64=1.11.2-2 Downloading dependency 637 of 641: fonts-lato:arm64=2.015-1 Downloading dependency 638 of 641: python3-mrcfile:arm64=1.5.4-2 Downloading dependency 639 of 641: libfabric1:arm64=2.1.0-1.1 Downloading dependency 640 of 641: python3-pyparsing:arm64=3.1.3-1 Downloading dependency 641 of 641: libxft2:arm64=2.3.6-1+b4 env --chdir=/srv/rebuilderd/tmp/rebuilderdc08kOc/out DEB_BUILD_OPTIONS=parallel=8 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1761327529 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildCfo5a7/debrebuild.sbuildrc.xvqMq0ej1ZHz sbuild --build=arm64 --host=arm64 --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildCfo5a7/debrebuild.tar.raZdcS2Gme6o --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=cctbx-2025.2+ds2+~3.23.0+ds1 /srv/rebuilderd/tmp/rebuilderdc08kOc/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3+deb13u1 (16 August 2025) on codethink02-arm64 +==============================================================================+ | cctbx 2025.2+ds2+~3.23.0+ds1-1 (arm64) Sat, 29 Nov 2025 20:53:39 +0000 | +==============================================================================+ Package: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 Source Version: 2025.2+ds2+~3.23.0+ds1-1 Distribution: unstable Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildCfo5a7/debrebuild.tar.raZdcS2Gme6o to /srv/rebuilderd/tmp/tmp.sbuild.uxFN_lvBzi... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Sat, 29 Nov 2025 20:53:52 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdc08kOc/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1.dsc exists in /srv/rebuilderd/tmp/rebuilderdc08kOc/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Sat, 29 Nov 2025 20:53:54 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: architecture-is-64-bit, debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, jq, libann-cctbx-dev (>= 1.1.2+doc-9~), libantlr3c-dev, libboost-dev, libboost-numpy-dev, libboost-python-dev, libboost-thread-dev, libboost-timer-dev, libcbf-dev (>= 0.9.7+dfsg1-2~), libclipper-dev, libeigen3-dev, libexpat1-dev, libfftw3-dev, libgl-dev, libglu1-mesa-dev, libhdf5-dev, liblz4-dev, libssm-dev, libtiff-dev, libtool, pybind11-dev, python3-all-dev:any, python3-biopython, python3-h5py (>= 3), python3-hdf5plugin, python3-legacy-cgi, python3-matplotlib, python3-mrcfile, python3-msgpack, python3-natsort, python3-numpy, python3-nxmx, python3-ordered-set, python3-pint, python3-pip, python3-procrunner, python3-psutil, python3-pycbf (>= 0.9.7+dfsg1-2~), python3-pymol, python3-pytest, python3-requests, python3-scipy, python3-setuptools, python3-six, python3-tqdm, python3-wxgtk4.0, rsync, scons, build-essential Filtered Build-Depends: architecture-is-64-bit, debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, jq, libann-cctbx-dev (>= 1.1.2+doc-9~), libantlr3c-dev, libboost-dev, libboost-numpy-dev, libboost-python-dev, libboost-thread-dev, libboost-timer-dev, libcbf-dev (>= 0.9.7+dfsg1-2~), libclipper-dev, libeigen3-dev, libexpat1-dev, libfftw3-dev, libgl-dev, libglu1-mesa-dev, libhdf5-dev, liblz4-dev, libssm-dev, libtiff-dev, libtool, pybind11-dev, python3-all-dev:any, python3-biopython, python3-h5py (>= 3), python3-hdf5plugin, python3-legacy-cgi, python3-matplotlib, python3-mrcfile, python3-msgpack, python3-natsort, python3-numpy, python3-nxmx, python3-ordered-set, python3-pint, python3-pip, python3-procrunner, python3-psutil, python3-pycbf (>= 0.9.7+dfsg1-2~), python3-pymol, python3-pytest, python3-requests, python3-scipy, python3-setuptools, python3-six, python3-tqdm, python3-wxgtk4.0, rsync, scons, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-aAoJxR/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Sat, 29 Nov 2025 20:53:58 +0000 | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in amd64 arm64 armel armhf i386 ppc64 ppc64el riscv64 s390x) +------------------------------------------------------------------------------+ | Build environment Sat, 29 Nov 2025 20:53:59 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.57+deb13-cloud-arm64 #1 SMP Debian 6.12.57-1 (2025-11-05) arm64 (aarch64) Toolchain package versions: binutils_2.45-8 dpkg-dev_1.22.21 g++-15_15.2.0-7 gcc-15_15.2.0-7 libc6-dev_2.41-12 libstdc++-14-dev_14.3.0-10 libstdc++-15-dev_15.2.0-7 libstdc++6_15.2.0-7 linux-libc-dev_6.16.12-2 Package versions: adduser_3.153 adwaita-icon-theme_49.0-1 architecture-properties_0.2.6 at-spi2-common_2.58.1-1 autoconf_2.72-3.1 automake_1:1.18.1-2 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.7 bash_5.3-1 binutils_2.45-8 binutils-aarch64-linux-gnu_2.45-8 binutils-common_2.45-8 blt_2.5.3+dfsg-8 bsdextrautils_2.41.2-4 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20250419 comerr-dev_2.1-1.47.2-3+b3 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-7 cpp-15-aarch64-linux-gnu_15.2.0-7 cpp-aarch64-linux-gnu_4:15.2.0-4 dash_0.5.12-12 dbus_1.16.2-2 dbus-bin_1.16.2-2 dbus-daemon_1.16.2-2 dbus-session-bus-common_1.16.2-2 dbus-system-bus-common_1.16.2-2 dbus-user-session_1.16.2-2 dconf-gsettings-backend_0.49.0-1 dconf-service_0.49.0-1 debconf_1.5.91 debhelper_13.28 debianutils_5.23.2 dh-autoreconf_21 dh-exec_0.30+b1 dh-python_6.20250414 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.16-2 fftw-dev_2.1.5-7+b1 fftw2_2.1.5-7+b1 file_1:5.46-5 findutils_4.10.0-3 fontconfig_2.15.0-2.4 fontconfig-config_2.15.0-2.4 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-font-awesome_5.0.10+really4.7.0~dfsg-4.1 fonts-lato_2.015-1 fonts-lyx_2.4.4-2 fonts-urw-base35_20200910-8 g++_4:15.2.0-4 g++-15_15.2.0-7 g++-15-aarch64-linux-gnu_15.2.0-7 g++-aarch64-linux-gnu_4:15.2.0-4 gcc_4:15.2.0-4 gcc-14-base_14.3.0-10 gcc-15_15.2.0-7 gcc-15-aarch64-linux-gnu_15.2.0-7 gcc-15-base_15.2.0-7 gcc-aarch64-linux-gnu_4:15.2.0-4 gettext_0.23.1-2+b1 gettext-base_0.23.1-2+b1 grep_3.12-1 groff-base_1.23.0-9 gtk-update-icon-cache_4.20.2+ds-1 gzip_1.13-1 hdf5-helpers_1.14.5+repack-4 hicolor-icon-theme_0.18-2 hostname_3.25 ibverbs-providers_56.1-1+b1 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 jq_1.8.1-4 krb5-multidev_1.21.3-5 libabsl20240722_20240722.0-4 libacl1_2.3.2-2+b1 libaec-dev_1.1.4-2 libaec0_1.1.4-2 libamd-comgr2_6.0+git20231212.4510c28+dfsg-3+b2 libamdhip64-5_5.7.1-7 libann-cctbx-dev_1.1.2+doc-9+b2 libann-cctbx0_1.1.2+doc-9+b2 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sphinx-rtd-theme-common_3.0.2+dfsg-3 systemd_258.1-1 systemd-sysv_258.1-1 sysvinit-utils_3.15-5 tar_1.35+dfsg-3.1 tk8.6-blt2.5_2.5.3+dfsg-8 tzdata_2025b-5 unicode-data_16.0.0-1 util-linux_2.41.2-4 w3c-sgml-lib_1.3-3 x11-common_1:7.7+26 x11proto-dev_2024.1-1 xfonts-encodings_1:1.0.4-2.2 xfonts-utils_1:7.7+7 xkb-data_2.42-1 xml-core_0.19 xorg-sgml-doctools_1:1.11-1.1 xtrans-dev_1.6.0-1 xz-utils_5.8.1-2 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Sat, 29 Nov 2025 20:53:59 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cctbx Binary: libcctbx0, libcctbx-dev, python3-cctbx Architecture: amd64 arm64 armel armhf i386 ppc64 ppc64el riscv64 s390x Version: 2025.2+ds2+~3.23.0+ds1-1 Maintainer: Debian Science Maintainers Uploaders: Picca Frédéric-Emmanuel , Radostan Riedel , Roland Mas , Homepage: https://github.com/cctbx/cctbx_project Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/science-team/cctbx Vcs-Git: https://salsa.debian.org/science-team/cctbx.git Testsuite: autopkgtest Testsuite-Triggers: bitshuffle, g++, python3-all, python3-dials-data, python3-h5py, python3-pytest, python3-pytest-mock, python3-pytest-regressions Build-Depends: architecture-is-64-bit, debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, jq, libann-cctbx-dev (>= 1.1.2+doc-9~), libantlr3c-dev, libboost-dev, libboost-numpy-dev, libboost-python-dev, libboost-thread-dev, libboost-timer-dev, libcbf-dev (>= 0.9.7+dfsg1-2~), libclipper-dev, libeigen3-dev, libexpat1-dev, libfftw3-dev, libgl-dev, libglu1-mesa-dev, libhdf5-dev, liblz4-dev, libssm-dev, libtiff-dev, libtool, pybind11-dev, python3-all-dev:any, python3-biopython , python3-h5py (>= 3) , python3-hdf5plugin , python3-legacy-cgi , python3-matplotlib , python3-mrcfile , python3-msgpack , python3-natsort , python3-numpy , python3-nxmx , python3-ordered-set , python3-pint , python3-pip, python3-procrunner , python3-psutil , python3-pycbf (>= 0.9.7+dfsg1-2~) , python3-pymol , python3-pytest , python3-requests , python3-scipy , python3-setuptools, python3-six, python3-tqdm , python3-wxgtk4.0 , rsync, scons Package-List: libcctbx-dev deb devel optional arch=amd64,arm64,armel,armhf,i386,ppc64,ppc64el,riscv64,s390x libcctbx0 deb libs optional arch=amd64,arm64,armel,armhf,i386,ppc64,ppc64el,riscv64,s390x python3-cctbx deb python optional arch=amd64,arm64,armel,armhf,i386,ppc64,ppc64el,riscv64,s390x Checksums-Sha1: 0817b577fa9401acf45777dfcd34b42b51e534bd 379044 cctbx_2025.2+ds2+~3.23.0+ds1.orig-dxtbx.tar.xz bf97229f39ff1f7e5065409cedc7ef6bd44094b5 23958624 cctbx_2025.2+ds2+~3.23.0+ds1.orig.tar.xz b271423d227dda46b2f3963294b6fdbef1ae1eac 423376 cctbx_2025.2+ds2+~3.23.0+ds1-1.debian.tar.xz Checksums-Sha256: ef443acb8ab0fe7c90d8eaaf231e50a0771b2f54cc993570b20cefb7fd1d72ca 379044 cctbx_2025.2+ds2+~3.23.0+ds1.orig-dxtbx.tar.xz fa3b4caaa27e77f2854dbcd64d410ee60c33eb575ff58871c3422034f1c4e07b 23958624 cctbx_2025.2+ds2+~3.23.0+ds1.orig.tar.xz 68a80eac5bb928cdad2aa8199826a4d0b87589258dfc83926b84b606ce647302 423376 cctbx_2025.2+ds2+~3.23.0+ds1-1.debian.tar.xz Files: 2380dd554091f2aa476df013371ae440 379044 cctbx_2025.2+ds2+~3.23.0+ds1.orig-dxtbx.tar.xz c5d68253419b1e6fe15068e5e5631334 23958624 cctbx_2025.2+ds2+~3.23.0+ds1.orig.tar.xz 0941877dab1bc736ff813c8e16a0ac9c 423376 cctbx_2025.2+ds2+~3.23.0+ds1-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEtBU2D1kett1zr/uD0w3s0lmTIvwFAmj7u+UACgkQ0w3s0lmT IvwxYA//WlvDftVT96eJ6plzOQNDnScJ1PGwZHWSN7hAy992JZNSrTTTRSXnyLJt 7OOP0+Li2lVe/S5j5jsub/KpNRWnYOsYLf+1CvcWVXfCEeTr55+6JF8XykOJN9Ys XHh68VLp3EhJEmkEWi6dWCSaj2hi6ZArj8jTF9/tCpOsC6MCcHYNHPCSZoahoabT feRNFG4zyjPV+A1FTzuKGz8NnfBRL+DW4wNXC558dBjiB1elT1v3svr6Lmy0KICA 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workaround_env_config.patch dpkg-source: info: applying boost_adaptbx.patch dpkg-source: info: applying reproducible-timestamp.patch dpkg-source: info: applying libtbx_env-per-python-version.patch dpkg-source: info: applying iotbx_with_system_libraries.patch dpkg-source: info: applying 0007-iotbx-mtz-load-ccp4-data-from-the-right-directory.patch dpkg-source: info: applying 0009-scons-soname.patch dpkg-source: info: applying 0010-fix-cbflib_adaptbx-compilation-with-the-system-cbfli.patch dpkg-source: info: applying 0011-dxtbx-use-the-system-libraries.patch dpkg-source: info: applying 0013-dxtbx-do-not-modify-the-HDF5_PLUGIN_PATH.patch dpkg-source: info: applying 0015-dxtbx-adapte-the-boost_python-link-name.patch dpkg-source: info: applying 0016-cctbx-avoid-FTBFS-when-cctbx-is-already-installed.patch dpkg-source: info: applying 0017-cctbx-do-not-hide-sign-comparison.patch dpkg-source: info: applying 0017-dxtbx-fix-for-unsigned-char-arch.patch dpkg-source: info: applying 0016-unactivated-ucif-compilation.patch dpkg-source: info: applying 0017-smtbx-save-the-generated-test-file-under-tmp.patch dpkg-source: info: applying 0018-iotbx-link-with-ccp4c-instead-of-ccp4io.patch dpkg-source: info: applying 0019-cbflib_adapter-link-cbf-private-with-cbf.patch dpkg-source: info: applying 0020-spotfinder-link-with-dxtbxspotfinder.patch dpkg-source: info: applying 0021-rstbx-link-with-ann_adaptor.patch dpkg-source: info: applying 0022-rstbx-link-rstbx_integration_ext-with-ann_adaptor.patch dpkg-source: info: applying 0023-rstbx-use-the-annself_excluded-namespace-from-ann-cc.patch dpkg-source: info: applying 0024-more-ann-ann-cctbx.patch dpkg-source: info: applying 0031-Add-missing-ctdint-header.patch dpkg-source: info: applying 0032-no-future.patch dpkg-source: info: applying 0027-Replace-unmaintained-orderedset-with-ordered_set.patch dpkg-source: info: applying 0027-Numpy-2-compat-from-upstream.patch dpkg-source: info: applying 0028-Fix-pip-invocation.patch dpkg-source: info: applying 0029-Fix-Python-syntax-warnings.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1761327529 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package cctbx dpkg-buildpackage: info: source version 2025.2+ds2+~3.23.0+ds1-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Roland Mas dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' cp -f debian/setup.py setup.py cp -r debian/annlib_adaptbx annlib_adaptbx mkdir annlib cp -r debian/ccp4io_adaptbx ccp4io_adaptbx mkdir ccp4io cp -r debian/gui_resources gui_resources dh_auto_clean pybuild --clean -i python{version} -p 3.13 I: pybuild base:311: python3.13 setup.py clean running clean removing '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; find . -name __pycache__ -type d -exec rm -rf {} \; rm -f setup.py rm -rf annlib annlib_adaptbx rm -rf ccp4io ccp4io_adaptbx rm -rf gui_resources make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libcctbx0.substvars debian/libcctbx-dev.substvars debian/python3-cctbx.substvars debian/files rm -fr -- debian/libcctbx0/ debian/tmp/ debian/libcctbx-dev/ debian/python3-cctbx/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' cp -f debian/setup.py setup.py cp -r debian/annlib_adaptbx annlib_adaptbx mkdir annlib cp -r debian/ccp4io_adaptbx ccp4io_adaptbx mkdir ccp4io cp -r debian/gui_resources gui_resources # configure the cctbx python modules dh_auto_configure pybuild --configure -i python{version} -p 3.13 I: pybuild base:311: python3.13 setup.py config running config # configure dxtbx python modules dh_auto_configure --sourcedirectory=dxtbx pybuild --configure -i python{version} -p 3.13 --dir dxtbx I: pybuild base:311: python3.13 setup.py config /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() Found 21 dxtbx dispatchers Found 141 Format classes running config # configure the cctbx libtbx build system dh_auto_configure -- -s custom --configure-args="mkdir -p {build_dir}_ && cd {build_dir}_ \ && {interpreter} /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io" pybuild --configure -i python{version} -p 3.13 -s custom --configure-args="mkdir -p {build_dir}_ && cd {build_dir}_ && {interpreter} /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io" I: pybuild base:311: mkdir -p '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_ && cd '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_ && python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io Python: 3.13.9 "/usr/bin/python3.13" Compiler: default Build mode: debug Warning level: 0 Precompiled Headers: False Static libraries: False Static exe: False Scan Boost headers: False Write full flex_fwd.h files: False Build Boost.Python extensions: True Define BOOST_PYTHON_NO_PY_SIGNATURES: False Define BOOST_PYTHON_BOOL_INT_STRICT: True Enable OpenMP if possible: False Boost threads enabled: True Enable CUDA: False Enable KOKKOS: False Use conda: False Use opt_resources if available: False Use environment flags: True Enable C++11: False CXXFLAGS = -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 CFLAGS = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=2 LDFLAGS = -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 command_version_suffix: None Relocatable paths anchored at: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_ Top-down list of all modules involved: wxtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/wxtbx" serialtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/serialtbx" rstbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx" spotfinder "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder" mmtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx" gltbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx" dxtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx" iotbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx" smtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx" ucif "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ucif" crys3d "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/crys3d" cctbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx" chiltbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/chiltbx" ccp4io+adaptbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io" "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io_adaptbx" cbflib_adaptbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx" annlib+adaptbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib" "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx" scitbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx" fable "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable" cma_es "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cma_es" omptbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/omptbx" boost+adaptbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost" "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx" tbxx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/tbxx" libtbx "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx" Creating files in build directory: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_" dispatcher_include_template.sh dispatcher_head.sh setpaths.sh setpaths.csh setpaths_all.sh setpaths_all.csh setpaths_debug.sh unsetpaths.sh setpaths_debug.csh unsetpaths.csh SConstruct Makefile run_tests.csh Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/crys3d/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/wxtbx/command_line" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/libtbx_refresh.py" Generating C++ header files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family" Generating C++ files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/boost_python" Using fable to convert scitbx/lbfgs.f Updating entry points for scitbx 1 entries for entry point pytest_randomly.random_seeder Obtaining file:///build/reproducible-path/cctbx-2025.2%2Bds2%2B~3.23.0%2Bds1/dxtbx Checking if build backend supports build_editable: started Checking if build backend supports build_editable: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Installing collected packages: dxtbx DEPRECATION: Legacy editable install of dxtbx==3.23.0 from file:///build/reproducible-path/cctbx-2025.2%2Bds2%2B~3.23.0%2Bds1/dxtbx (setup.py develop) is deprecated. pip 25.3 will enforce this behaviour change. A possible replacement is to add a pyproject.toml or enable --use-pep517, and use setuptools >= 64. If the resulting installation is not behaving as expected, try using --config-settings editable_mode=compat. Please consult the setuptools documentation for more information. Discussion can be found at https://github.com/pypa/pip/issues/11457 Running setup.py develop for dxtbx Successfully installed dxtbx Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/cctbx/eltbx" Generating C++ files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/cctbx/boost_python" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/crys3d/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/smtbx/boost_python" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/libtbx_refresh.py" Using fable to convert iotbx/pdb/hybrid_36_f.f Writing: iotbx/pdb/hybrid_36_fem.cpp Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/gltbx" fonts: 8x13 9x15 10x20 Processing: "/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/libtbx_refresh.py" Done. make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' # build the python modules dh_auto_build pybuild --build -i python{version} -p 3.13 I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx copying omptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx copying omptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/proq2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx copying mmtbx/clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/simple_compilation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tst_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tokenization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tst_cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/intrinsics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable copying fable/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website copying cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website copying cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website copying cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/watch_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx copying cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/adptbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/run_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/multipolar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/translation_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx copying cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/browser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/icons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/process_control.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/polygon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/windows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/layout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx copying wxtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/minpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/simplex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/fftpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/smoothing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx copying scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fast_linalg copying fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fast_linalg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx copying qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx copying qttbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx copying serialtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx copying cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx copying cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx copying cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx copying cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx copying annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx copying annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/wingide.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/env_config.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/introspection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/objgraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/progress.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/load_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/easy_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/log.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/pyplot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/callbacks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/pyframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/complex_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/console_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/simplexml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/smart_open.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/configure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx copying libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/pymol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/ranges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/logfiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx copying iotbx/symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx copying fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx copying fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx copying fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx copying rstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx copying rstbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx copying rstbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es copying cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es copying cma_es/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es copying cma_es/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es copying cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder copying spotfinder/exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder copying spotfinder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder copying spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx copying smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx copying smtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx copying smtbx/development.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx copying smtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx copying smtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/gl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/quadrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/glu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx copying gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx copying boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx copying boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx copying boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx copying boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx copying simtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx copying simtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx copying crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx copying crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx copying crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression copying crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer copying crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line copying crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs copying crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs copying crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview copying crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview copying crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview copying crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview copying crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview copying crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src copying crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src copying crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment copying mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/geostd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa copying mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent copying mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent copying mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent copying mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent copying mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr copying mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr copying mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer copying mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands copying mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling copying mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building copying mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry copying mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls copying mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors copying mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors copying mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/phi_psi_2_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation copying mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space copying mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space copying mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik copying mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik copying mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik copying mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik copying mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik copying mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions copying mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci copying mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci copying mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci copying mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci copying mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci copying mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_mmtbx_refinement_wrappers_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_lrv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_scattering_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_and_dm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression copying mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce copying mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce copying mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce copying mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce copying mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce copying mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename copying mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification copying mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification copying mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer copying mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model copying mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model copying mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model copying mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage copying mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage copying mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage copying mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage copying mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components copying mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components copying mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components copying mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe copying mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe copying mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe copying mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe copying mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe copying mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line copying mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils copying mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs copying mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs copying mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den copying mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den copying mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den copying mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement copying mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder copying mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks copying mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks copying mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks copying mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon copying mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon copying mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon copying mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon copying mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon copying mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics copying mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb copying mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb copying mmtbx/wwpdb/rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb copying mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning copying mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning copying mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning copying mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias copying mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias copying mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model copying mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model copying mmtbx/model/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model copying mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model copying mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model copying mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps copying mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands copying mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands copying mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands copying mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran copying mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran copying mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm copying mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm copying mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm copying mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm copying mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm copying mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/split.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line copying fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression copying cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line copying cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line copying cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol copying cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol copying cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/replay.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web copying cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry copying cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints copying cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints copying cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints copying cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints copying cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression copying cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx copying cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx copying cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx copying cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx copying cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx copying cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller copying cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller copying cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller copying cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller copying cctbx/miller/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller copying cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/github.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development copying cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance copying cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx copying cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging copying cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging copying cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron copying cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family copying cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family copying cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators copying cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators copying cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line copying cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples copying cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/masks copying cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray copying cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz copying cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal copying cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx copying cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx copying cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell copying cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development copying cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering copying cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging copying cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets copying cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets copying cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets copying cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets copying cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations copying cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations copying cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr copying cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr copying cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine copying prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster copying prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster copying prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line copying prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity copying prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity copying prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity copying prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity copying prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls copying wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports copying wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports copying wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports copying wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots copying wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots copying wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots copying wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line copying wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python copying scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body copying scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body copying scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib copying scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph copying scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils copying scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils copying scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin copying scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/random copying scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/random creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface copying scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface copying scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg copying scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg copying scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg copying scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg copying scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg copying scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx copying scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/sparse copying scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/sparse creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree copying scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree copying scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner copying scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner copying scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl copying scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix copying scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix copying scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family copying scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family copying scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family copying scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils copying scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators copying scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators copying scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators copying scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators copying scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/spe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/farey.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math copying scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs copying scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples copying scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx copying scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx copying scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx copying scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python copying scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests copying scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington copying scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington copying scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers copying qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers copying qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util copying serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util copying serialtbx/util/time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util copying serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util copying serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector copying serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector copying serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector copying serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector copying serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector copying serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line copying cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line copying cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx copying libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx copying libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx copying libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx copying libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle copying libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil copying libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils copying libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils copying libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils copying libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils copying libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils copying libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development copying libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development copying libtbx/development/timers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development copying libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development copying libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build copying libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line copying libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling copying libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server copying libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber copying iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber copying iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber copying iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek copying iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek copying iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek copying iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek copying iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map copying iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map copying iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map copying iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz copying iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint copying iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint copying iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdb_cif_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression copying iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack copying iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor copying iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor copying iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor copying iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor copying iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor copying iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6 copying iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6 copying iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6 creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx copying iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors copying iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager copying iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb copying iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools copying iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds copying iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif copying iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve copying iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve copying iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve copying iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line copying iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns copying iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples copying iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs copying iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs copying iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs copying iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs copying iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs copying iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof copying iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof copying iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof copying iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics copying iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile copying iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile copying iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util copying iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util copying iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context copying iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation copying rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation copying rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation copying rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation copying rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation copying rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer copying rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer copying rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil copying rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil copying rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil copying rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil copying rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons copying rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support copying rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support copying rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support copying rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage copying rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api copying rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction copying rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction copying rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction copying rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction copying rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors copying rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors copying rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry copying rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry copying rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry copying rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx copying rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx copying rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx copying rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx copying rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core copying rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core copying rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family copying rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family copying rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line copying rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps copying rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps copying rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps copying rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps copying rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core copying rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass copying rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass copying rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing copying rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing copying rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing copying rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing copying rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots copying rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots copying rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills copying rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui copying xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui copying xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel copying xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel copying xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel copying xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos copying xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos copying xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos copying xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation copying xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation copying xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation copying xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel copying xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel copying xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel copying xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel copying xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel copying xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell copying xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell copying xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell copying xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell copying xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell copying xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util copying xfel/util/mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx copying xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp copying xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging copying xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering copying xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api copying xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api copying xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api copying xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line copying xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology copying xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal copying xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal copying xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi copying xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo copying xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc copying xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc copying xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc copying xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc copying xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc copying xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db copying xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components copying xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line copying xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs copying xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs copying xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector copying xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector copying xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector copying xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report copying xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms copying xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application copying xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application copying xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application copying xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application copying xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application copying xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line copying xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line copying xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line copying xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model copying xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database copying xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database copying xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database copying xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database copying xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database copying xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs copying xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables copying xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine copying xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics copying xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil copying xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil copying xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge copying xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge copying xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge copying xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output copying xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output copying xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation copying xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation copying xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify copying xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale copying xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale copying xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale copying xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter copying xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter copying xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter copying xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter copying xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter copying xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group copying xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group copying xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group copying xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance copying xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance copying xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance copying xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference copying xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference copying xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference copying xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils copying xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils copying xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils copying xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input copying xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input copying xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input copying xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input copying xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input copying xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model copying xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model copying xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model copying xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model copying xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale copying xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx copying xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx copying xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx copying xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx copying xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering copying xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering copying xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering copying xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering copying xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line copying xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line copying xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox copying spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox copying spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications copying spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction copying spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction copying spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction copying spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family copying spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family copying spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox copying spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox copying spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line copying spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers copying spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support copying spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support copying spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft copying cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft copying cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering copying cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering copying cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math copying cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions copying cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions copying cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression copying smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression copying smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression copying smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl copying smtbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl copying smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/absolute_structure copying smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/absolute_structure creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/array_family copying smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators copying smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators copying smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line copying smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement copying smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement copying smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement copying smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/masks copying smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio copying smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio copying smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors copying smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data copying smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_disorder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_direction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_same_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/direct copying smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/direct creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line copying gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line copying gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph copying boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost copying boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel copying simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg copying simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg copying simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos copying simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos copying simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling copying simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling copying simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling copying simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling copying simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu copying simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu copying simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu copying simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu copying simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems # build the dxtbx python module dh_auto_build --sourcedirectory=dxtbx pybuild --build -i python{version} -p 3.13 --dir dxtbx I: pybuild base:311: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() Found 21 dxtbx dispatchers Found 141 Format classes running build running build_py creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus copying src/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking copying src/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking copying src/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util copying src/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util copying src/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util copying src/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data copying src/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatADSCSMVCetaD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatESSNMX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line copying src/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize copying src/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize copying src/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize copying src/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize copying src/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize copying src/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs copying src/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/py.typed -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx copying src/dxtbx/error.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family copying src/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family copying src/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family copying src/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python copying src/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python copying src/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python copying src/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python copying src/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python copying src/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example copying src/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example copying src/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example copying src/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking copying src/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking copying src/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/boost_python copying src/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/boost_python copying src/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data copying src/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format copying src/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python copying src/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model copying src/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python # build the cctbx extensions and libraries dh_auto_build -- -s custom --build-args="cd {build_dir}_ && ./bin/libtbx.scons -j 8" pybuild --build -i python{version} -p 3.13 -s custom --build-args="cd {build_dir}_ && ./bin/libtbx.scons -j 8" I: pybuild base:311: cd '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_ && ./bin/libtbx.scons -j 8 scons: Reading SConscript files ... /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/libtbx/SConscript:1414: SyntaxWarning: invalid escape sequence '\.' cuda_version = re.findall('release [0-9]+\.*[0-9]+', line) libtbx.scons: using flags from initial environment: CXXFLAGS = -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 CFLAGS = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=2 LDFLAGS = -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 libtbx.scons: OpenMP is disabled. BOOST_PYTHON_LIB_VERSION: boost_python313 BOOST_NUMPY_LIB_VERSION: boost_numpy313 BOOST_VERSION: 108300 Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cbflib.tst_memory' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.getting_started' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.sym_equiv_sites' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.convert_ccp4_symop_lib' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.lattice_symmetry' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.find_distances' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/exe_dev/cctbx.sys_abs_equiv_space_groups' scons: done reading SConscript files. scons: Building targets ... g++ -o annlib_adaptbx/ann/ann_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -Iannlib_adaptbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/src -Iannlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/ann/ann_adaptor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o annlib_adaptbx/ann/boost_python/annlib_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/usr/include/python3.13 -Iannlib_adaptbx/ann/boost_python/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/ann/boost_python/src -Iannlib_adaptbx/ann/boost_python/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/ann/boost_python/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/ann/boost_python/annlib_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/blobs_cmd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/blobs_cmd.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/asymmetric_map.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/asymmetric_map.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/skeletons.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/skeletons.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/dijkstra.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/dijkstra.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/xplor/map_reader.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/xplor/map_reader.cpp g++ -o iotbx/xplor/map_writer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/xplor/map_writer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/cut.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/direct_space_asu/proto/cut.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/reference_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/direct_space_asu/proto/reference_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libiotbx_xplor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_xplor.so.0 iotbx/xplor/map_reader.o iotbx/xplor/map_writer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libiotbx_xplor.so.0.0.1' 'lib/libiotbx_xplor.so.0'->'lib/libiotbx_xplor.so.0.0.1' 'lib/libiotbx_xplor.so'->'lib/libiotbx_xplor.so.0.0.1' g++ -o cctbx/eltbx/basic.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/basic.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/it1992.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering/it1992.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/wk1995.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering/wk1995.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/n_gaussian_raw.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering/n_gaussian_raw.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/n_gaussian.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering/n_gaussian.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/fp_fdp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/fp_fdp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_01_12.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_01_12.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_13_24.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_13_24.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_25_36.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_25_36.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_37_48.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_37_48.cpp g++ -o cctbx/eltbx/henke_tables_49_60.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_49_60.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_61_72.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_61_72.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_73_84.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_73_84.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_85_92.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/henke_tables_85_92.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/icsd_radii.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/icsd_radii.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/covalent_radii.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/covalent_radii.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/neutron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/neutron.cpp g++ -o cctbx/eltbx/sasaki.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_01_12.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_01_12.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_13_24.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_13_24.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_25_36.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_25_36.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_37_48.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_37_48.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_49_60.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_49_60.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_61_72.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_61_72.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_73_82.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_73_82.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/tiny_pse.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/tiny_pse.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/wavelengths.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/wavelengths.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/electron_scattering/peng1996.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/electron_scattering/peng1996.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/attenuation_coefficient.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/attenuation_coefficient.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/asu.cpp g++ -o cctbx/miller/bins.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/bins.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/index_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/index_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/index_span.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/index_span.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_bijvoet_mates.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match_bijvoet_mates.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_multi_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match_multi_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/sym_equiv.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/sym_equiv.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/bricks.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/bricks.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/change_of_basis_op.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/find_affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/find_affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/group_codes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/group_codes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/hall_in.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/hall_in.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/lattice_tr.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/lattice_tr.cpp g++ -o cctbx/sgtbx/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/lattice_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/miller.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/miller.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reciprocal_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reciprocal_space_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reciprocal_space_ref_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reciprocal_space_ref_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rot_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rot_mx_info.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx_info.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/row_echelon_solve.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/row_echelon_solve.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rt_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/select_generators.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/select_generators.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/seminvariant.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/seminvariant.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/site_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/space_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/space_group_type.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group_type.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/symbols.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/symbols.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensor_rank_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/tr_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/tr_vec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_vec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/hall_symbol_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reference_settings/hall_symbol_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/matrix_group_code_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reference_settings/matrix_group_code_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/normalizer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reference_settings/normalizer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/reference_settings/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/uctbx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/uctbx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/spoil_optimization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/spoil_optimization.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/crystal_orientation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/crystal_orientation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o omptbx/stubs.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/omptbx/stubs.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/breadth_first_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/breadth_first_search_ext.cpp g++ -o lib/libomptbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libomptbx.so.0 omptbx/stubs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/clustering_algorithm_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/clustering_algorithm_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libomptbx.so.0.0.1' 'lib/libomptbx.so.0'->'lib/libomptbx.so.0.0.1' 'lib/libomptbx.so'->'lib/libomptbx.so.0.0.1' g++ -o boost_adaptbx/graph/connected_component_algorithm_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/connected_component_algorithm_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/graph_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/graph_structure_comparison_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_structure_comparison_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/maximum_clique_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/maximum_clique_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libcctbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcctbx.so.0 cctbx/eltbx/basic.o cctbx/eltbx/xray_scattering/it1992.o cctbx/eltbx/xray_scattering/wk1995.o cctbx/eltbx/xray_scattering/n_gaussian_raw.o cctbx/eltbx/xray_scattering/n_gaussian.o cctbx/eltbx/fp_fdp.o cctbx/eltbx/henke.o cctbx/eltbx/henke_tables_01_12.o cctbx/eltbx/henke_tables_13_24.o cctbx/eltbx/henke_tables_25_36.o cctbx/eltbx/henke_tables_37_48.o cctbx/eltbx/henke_tables_49_60.o cctbx/eltbx/henke_tables_61_72.o cctbx/eltbx/henke_tables_73_84.o cctbx/eltbx/henke_tables_85_92.o cctbx/eltbx/icsd_radii.o cctbx/eltbx/covalent_radii.o cctbx/eltbx/neutron.o cctbx/eltbx/sasaki.o cctbx/eltbx/sasaki_tables_01_12.o cctbx/eltbx/sasaki_tables_13_24.o cctbx/eltbx/sasaki_tables_25_36.o cctbx/eltbx/sasaki_tables_37_48.o cctbx/eltbx/sasaki_tables_49_60.o cctbx/eltbx/sasaki_tables_61_72.o cctbx/eltbx/sasaki_tables_73_82.o cctbx/eltbx/tiny_pse.o cctbx/eltbx/wavelengths.o cctbx/eltbx/electron_scattering/peng1996.o cctbx/eltbx/attenuation_coefficient.o cctbx/miller/asu.o cctbx/miller/bins.o cctbx/miller/index_generator.o cctbx/miller/index_span.o cctbx/miller/match_bijvoet_mates.o cctbx/miller/match_indices.o cctbx/miller/match_multi_indices.o cctbx/miller/sym_equiv.o cctbx/sgtbx/bricks.o cctbx/sgtbx/change_of_basis_op.o cctbx/sgtbx/find_affine.o cctbx/sgtbx/group_codes.o cctbx/sgtbx/hall_in.o cctbx/sgtbx/lattice_tr.o cctbx/sgtbx/lattice_symmetry.o cctbx/sgtbx/miller.o cctbx/sgtbx/reciprocal_space_asu.o cctbx/sgtbx/reciprocal_space_ref_asu.o cctbx/sgtbx/rot_mx.o cctbx/sgtbx/rot_mx_info.o cctbx/sgtbx/row_echelon_solve.o cctbx/sgtbx/rt_mx.o cctbx/sgtbx/select_generators.o cctbx/sgtbx/seminvariant.o cctbx/sgtbx/site_symmetry.o cctbx/sgtbx/space_group.o cctbx/sgtbx/space_group_type.o cctbx/sgtbx/symbols.o cctbx/sgtbx/tensor_rank_2.o cctbx/sgtbx/tr_group.o cctbx/sgtbx/tr_vec.o cctbx/sgtbx/utils.o cctbx/sgtbx/wyckoff.o cctbx/sgtbx/reference_settings/hall_symbol_table.o cctbx/sgtbx/reference_settings/matrix_group_code_table.o cctbx/sgtbx/reference_settings/normalizer.o cctbx/sgtbx/reference_settings/wyckoff.o cctbx/uctbx/uctbx.o cctbx/uctbx/spoil_optimization.o cctbx/uctbx/crystal_orientation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libcctbx.so.0.0.1' 'lib/libcctbx.so.0'->'lib/libcctbx.so.0.0.1' 'lib/libcctbx.so'->'lib/libcctbx.so.0.0.1' g++ -o boost_adaptbx/graph/metric_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/metric_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/breadth_first_search_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/connected_component_algorithm_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/clustering_algorithm_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/maximum_clique_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_structure_comparison_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/metric_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/graph/min_cut_max_flow_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/min_cut_max_flow_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/utility_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/utility_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/hybrid_times_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/hybrid_times_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/meta_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/meta_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/optional_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/optional_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/min_cut_max_flow_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/graph/utility_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o boost_adaptbx/rational_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/rational_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/std_pair_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/std_pair_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/boost_thread_test.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/tests/boost_thread_test.cpp g++ -o boost_adaptbx/tests/python_streambuf_test_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/tests/python_streambuf_test_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/tst_optional_copy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/tests/tst_optional_copy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/tst_optional_copy -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread boost_adaptbx/tests/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o boost_adaptbx/tuple_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/boost_adaptbx/tuple_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DSWIG_PYTHON_STRICT_BYTE_CHAR -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/boost_python/cbflib_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/buffer_based_service.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/buffer_based_service.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/cbf_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/cbf_adaptor.cpp g++ -o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/cbf_byte_offset_optimized.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/mar_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/mar_adaptor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/tst_memory.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DCBF_NO_REGEX -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx/detectors/tst_memory.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o ccp4io_adaptbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io_adaptbx/ext.cpp gcc -o ccp4io_adaptbx/fortran_call_stubs.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io -I. -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io_adaptbx/fortran_call_stubs.c cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ gcc -o ccp4io_adaptbx/printf_wrappers.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io -I. -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ccp4io_adaptbx/printf_wrappers.c g++ -o cctbx/adp_restraints/adp_restraints_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/adp_restraints_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/adp_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/adp_restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/adp_similarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/adp_similarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/aniso_restraints_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/aniso_restraints_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libcctbx_sgtbx_asu.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libcctbx_sgtbx_asu.so.0 cctbx/sgtbx/direct_space_asu/proto/cut.o cctbx/sgtbx/direct_space_asu/proto/reference_table.o cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lm /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/fixed_u_eq_adp_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libcctbx_sgtbx_asu.so.0.0.1' 'lib/libcctbx_sgtbx_asu.so.0'->'lib/libcctbx_sgtbx_asu.so.0.0.1' 'lib/libcctbx_sgtbx_asu.so'->'lib/libcctbx_sgtbx_asu.so.0.0.1' g++ -o lib/libasymmetric_map.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libasymmetric_map.so.0 cctbx/maptbx/asymmetric_map.o cctbx/maptbx/skeletons.o cctbx/maptbx/dijkstra.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libasymmetric_map.so.0.0.1' 'lib/libasymmetric_map.so.0'->'lib/libasymmetric_map.so.0.0.1' 'lib/libasymmetric_map.so'->'lib/libasymmetric_map.so.0.0.1' g++ -o bin/cctbx_blobs -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/maptbx/blobs_cmd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm g++ -o cctbx/adp_restraints/isotropic_adp_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/isotropic_adp_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/rigid_bond_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/rigid_bond_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/rigu_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adp_restraints/rigu_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/adptbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adptbx/boost_python/adptbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/anharmonic_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adptbx/boost_python/anharmonic_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/hirshfeld.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/adptbx/boost_python/hirshfeld.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/array_family/boost_python/flex_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_hendrickson_lattman.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/array_family/boost_python/flex_hendrickson_lattman.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_miller_index.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/array_family/boost_python/flex_miller_index.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_xray_scatterer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/array_family/boost_python/flex_xray_scatterer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/emma_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/boost_python/emma_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/french_wilson_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/boost_python/french_wilson_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/orientation_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/boost_python/orientation_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/statistics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/boost_python/statistics_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/covariance/boost_python/covariance_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/covariance/boost_python/covariance_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/asu_clusters_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/asu_clusters_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/close_packing_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/close_packing_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/coordination_sequences_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/coordination_sequences_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/crystal_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/crystal_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/direct_space_asu_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/incremental_pairs_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/incremental_pairs_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/neighbors_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/neighbors_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/pair_tables_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/pair_tables_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/site_cluster_analysis_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/site_cluster_analysis_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/symmetry_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/symmetry_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/dmtbx/boost_python/dmtbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/dmtbx/boost_python/dmtbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/dmtbx/boost_python/triplet_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/dmtbx/boost_python/triplet_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/dmtbx/boost_python/triplet_phase_relation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/dmtbx/boost_python/triplet_phase_relation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/attenuation_coefficient_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/attenuation_coefficient_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/chemical_elements_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/chemical_elements_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/covalent_radii_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/covalent_radii_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/fp_fdp_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/fp_fdp_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/henke_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/henke_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/icsd_radii_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/icsd_radii_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/neutron_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/neutron_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/sasaki_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/sasaki_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/tiny_pse_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/tiny_pse_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/wavelengths_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/wavelengths_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/xray_scattering_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/boost_python/xray_scattering_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/convert_ccp4_symop_lib.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/convert_ccp4_symop_lib.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/find_distances.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/find_distances.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/getting_started.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/getting_started.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/lattice_symmetry.cpp g++ -o cctbx/examples/sym_equiv_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/sym_equiv_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/sys_abs_equiv_space_groups.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/examples/sys_abs_equiv_space_groups.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry/boost_python/geometry_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry/boost_python/geometry_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/angle_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/bond_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/bond_similarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle_bpl.cpp:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::angle_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle_bpl.cpp:75:65: required from here 75 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 76 | "shared_angle_proxy") | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_misc.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp:14: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::map; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp:129:23: required from here 129 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 130 | "bond_params_table") | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp:232:25: required from here 232 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 233 | "shared_bond_simple_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_bpl.cpp:340:25: required from here 340 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 341 | "shared_bond_asu_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:12: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity.h:84:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 84 | for(int i=0;i, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity.h:108:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 108 | for(int i=0;i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_similarity_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:55:44: required from here 54 | scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | bond_similarity_proxy, rir>::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 56 | "shared_bond_similarity_proxy"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:79:54: required from here 78 | scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | af::tiny, 2>, rbv>::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 80 | "sites_array"); | ~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/geometry_restraints/chirality_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/chirality_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_sorted.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_sorted_bpl.cpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/tuple.hpp:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/shared_wrapper_pickle.hpp:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/angle_bpl.cpp:2: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o cctbx/geometry_restraints/dihedral_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h: In instantiation of ‘int cctbx::crystal::direct_space_asu::asu_mappings::find_i_sym(unsigned int, const cctbx::sgtbx::rt_mx&) const [with FloatType = double; IntShiftType = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/pair_tables.h:643:46: required from ‘bool cctbx::crystal::pair_asu_table::process_pair(unsigned int, unsigned int, const cctbx::sgtbx::rt_mx&) [with FloatType = double; IntShiftType = int]’ 643 | int j_sym = asu_mappings_->find_i_sym(j_seq, rt_mx_j); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/pair_tables.h:543:35: required from ‘cctbx::crystal::pair_asu_table& cctbx::crystal::pair_asu_table::add_pair(const scitbx::af::tiny&) [with FloatType = double; IntShiftType = int]’ 543 | bool is_new = process_pair(i_seqs[0], i_seqs[1], rt_mx_ji); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond_sorted.h:16:30: required from here 16 | pair_asu_table.add_pair(bond_simple_proxies[i].i_seqs); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:859:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 859 | for(int i_sym=0; i_sym, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 869 | for(int i_sym=0; i_sym::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/chirality_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::chirality_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/chirality_bpl.cpp:75:60: required from here 75 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 76 | "shared_chirality_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:12: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with ProxyType = dihedral_proxy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:110:17: required from here 110 | shared_proxy_remove, ( | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | if (match_ctr != i_seqs.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::dihedral_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:84:65: required from here 84 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 85 | "shared_dihedral_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::nonbonded_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:92:25: required from here 92 | shared_w_t::wrap("shared_nonbonded_simple_proxy") | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::nonbonded_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:125:25: required from here 125 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 126 | "shared_nonbonded_asu_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/geometry_restraints/nonbonded_sorted_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_sorted_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/parallelity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/planarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/planarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_sorted_bpl.cpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/neighbors_fast.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/pair_tables.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicles.h: In instantiation of ‘scitbx::vec3 scitbx::cubicles::i_cubicle(const SiteType&) const [with SiteType = cctbx::cartesian; CubicleContentType = std::vector; FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/neighbors_fast.h:77:34: required from ‘cctbx::crystal::neighbors::fast_pair_generator::fast_pair_generator(const boost::shared_ptr >&, const FloatType&, bool, const FloatType&, const FloatType&) [with FloatType = double; IntShiftType = int]’ 77 | cubicles_.i_cubicle(mappings[mi.i_seq][mi.i_sym].mapped_site())); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:80:27: required from here 80 | min_cubicle_edge); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 176 | else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1; | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::parallelity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp:82:60: required from here 82 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 83 | "shared_parallelity_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/planarity_bpl.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::planarity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/planarity_bpl.cpp:62:23: required from here 62 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 63 | "shared_planarity_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/maptbx/asymmetric_map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/asymmetric_map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/bcr/bcr_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/bcr/bcr_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/coordinate_transformers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/coordinate_transformers.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/grid_indices_around_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/grid_indices_around_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/grid_tags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/grid_tags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/gridding.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/gridding.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/maptbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/maptbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/misc.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/misc.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/peak_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/peak_search.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/pymol_interface.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/pymol_interface.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/statistics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/structure_factors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/maptbx/boost_python/structure_factors.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/masks/boost_python/masks_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/masks/boost_python/masks_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/math/boost_python/math_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/math/time_trigonometry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/math/time_trigonometry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/math/time_trigonometry -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/math/time_trigonometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_timer -lm g++ -o cctbx/merging/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/merging/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/amplitude_normalisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/amplitude_normalisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/bins.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/bins.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/change_basis.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/change_basis.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/expand_to_p1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/expand_to_p1.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/f_calc_map.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/f_calc_map.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/index_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/index_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/index_span.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/index_span.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/lookup_utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/lookup_utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/match_bijvoet_mates.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/match_bijvoet_mates.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/match_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/match_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/match_multi_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/match_multi_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/merge_equivalents.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/merge_equivalents.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/miller_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/miller_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/phase_integrator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/phase_integrator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/phase_transfer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/phase_transfer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/randomize_amplitude_and_phase.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/randomize_amplitude_and_phase.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/slices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/slices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/sym_equiv.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/boost_python/sym_equiv.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/multipolar/aspherical_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/multipolar/aspherical_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/brick.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/brick.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/change_of_basis.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/change_of_basis.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/find_affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/find_affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/lattice_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/phase_info.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/phase_info.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/reciprocal_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/reciprocal_space_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/rot_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/rot_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/rt_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/rt_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/search_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/search_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/select_generators.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/select_generators.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/seminvariant.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/seminvariant.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/sgtbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/sgtbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/site_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/site_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/space_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/space_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/space_group_type.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/space_group_type.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/sym_equiv_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/sym_equiv_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/symbols.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/symbols.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/tensor_rank_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tensors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/tensors.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tr_vec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/tr_vec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/boost_python/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/asu_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/direct_space_asu/proto/asu_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/tst_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/direct_space_asu/proto/tst_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/symmetry_search/boost_python/symmetry_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/symmetry_search/boost_python/symmetry_search_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/fast_nv1995.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/translation_search/boost_python/fast_nv1995.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/fast_terms.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/translation_search/boost_python/fast_terms.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/tst_asu -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/sgtbx/direct_space_asu/proto/tst_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lm g++ -o cctbx/translation_search/boost_python/symmetry_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/translation_search/boost_python/symmetry_flags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/translation_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/translation_search/boost_python/translation_search_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/boost_python/fast_minimum_reduction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/boost_python/fast_minimum_reduction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/boost_python/uctbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/boost_python/uctbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/determine_unit_cell/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_SINGLEFILE_NCDIST -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx/determine_unit_cell/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/conversions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/conversions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/curvatures_simple.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/curvatures_simple.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/each_hkl_gradients_direct.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/each_hkl_gradients_direct.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/extinction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/extinction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/f_model_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/f_model_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/fast_gradients.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/fast_gradients.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/curvatures_simple.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/curvatures_simple.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/gradient_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/gradient_flags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/sampling_base.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/fast_gradients.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/fast_gradients.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match_indices.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/lookup_utils.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/f_model.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/f_model_bpl.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/f_model.h:4: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/f_model.h: In instantiation of ‘cctbx::xray::f_model_core_data::f_model_core_data cctbx::xray::f_model_core_data::f_model_core_data::select(const scitbx::af::const_ref&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/f_model_bpl.cpp:174:32: required from here 174 | .def("select", &w_t::select) | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/f_model.h:732:38: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 732 | CCTBX_ASSERT( iselection[ii]::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/minimization.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/minimization.cpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match_indices.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/lookup_utils.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:14, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:4: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/sampled_model_density.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/sampled_model_density.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘FloatType cctbx::xray::grouped_data::merger::bic() [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:68:29: required from here 68 | .def("bic", &w_t::bic) | ^~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:257:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 257 | for (long int ii=0;ii::r_abs() [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:69:31: required from here 69 | .def("r_abs", &w_t::r_abs) | ^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:271:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 271 | for (long int ii=0;ii cctbx::xray::grouped_data::merger::combine_obs(long int) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:258:24: required from ‘FloatType cctbx::xray::grouped_data::merger::bic() [with FloatType = double]’ 258 | tmp_result = combine_obs( ii ); | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:68:29: required from here 68 | .def("bic", &w_t::bic) | ^~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:213:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 213 | for (int ii=1;ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 231 | for (int ii=1;ii::unmerged_data(scitbx::af::const_ref >, scitbx::af::const_ref >, const cctbx::sgtbx::space_group&, const bool&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; Value = cctbx::xray::grouped_data::unmerged_data; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<4>::apply::execute(PyObject*, t0, t1, t2, t3) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref >&; t2 = const cctbx::sgtbx::space_group&; t3 = const bool&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; W = cctbx::xray::grouped_data::unmerged_data; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:27:15: required from here 26 | class_("unmerged_data", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 | .def(init< scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 | scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 | sgtbx::space_group const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | bool const& | ~~~~~~~~~~~ 31 | > | ~ 32 | (( arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~~ 33 | arg("asu_hkl"), | ~~~~~~~~~~~~~~~ 34 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 35 | arg("anomalous_flag") ))) | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:54:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 54 | for (int ii=0;ii >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | for (int ii=0; ii >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | CCTBX_ASSERT( tmp_index < asu_hkl.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:67:11: note: in expansion of macro ‘CCTBX_ASSERT’ 67 | CCTBX_ASSERT( tmp_index < asu_hkl.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘cctbx::xray::grouped_data::merger::merger(scitbx::af::const_ref >, scitbx::af::const_ref, scitbx::af::const_ref, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value&>; A2 = boost::python::objects::reference_to_value&>; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; Value = cctbx::xray::grouped_data::merger; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<6>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref&; t2 = const scitbx::af::const_ref&; t3 = const cctbx::sgtbx::space_group&; t4 = const bool&; t5 = const cctbx::uctbx::unit_cell&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; W = cctbx::xray::grouped_data::merger; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/grouped_data.cpp:54:15: required from here 53 | class_("merger", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 54 | .def(init< scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | scitbx::af::const_ref< double > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | scitbx::af::const_ref< double > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 | sgtbx::space_group const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 | bool const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 | cctbx::uctbx::unit_cell const& | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 | > | ~ 61 | (( arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~~ 62 | arg("i_obs"), | ~~~~~~~~~~~~~ 63 | arg("s_obs"), | ~~~~~~~~~~~~~ 64 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 65 | arg("anomalous_flag"), | ~~~~~~~~~~~~~~~~~~~~~~ 66 | arg("unit_cell") | ~~~~~~~~~~~~~~~~ 67 | ))) | ~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/grouped_data.h:151:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 151 | for (int ii=0;ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 167 | for (int ii=0; ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/parameter_map.cpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/parameter_map.h: In instantiation of ‘void cctbx::xray::parameter_map::init_scatterer_part(const scitbx::af::const_ref&) [with XRayScattererType = cctbx::xray::scatterer<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/parameter_map.h:54:7: required from ‘cctbx::xray::parameter_map::parameter_map(const scitbx::af::const_ref&) [with XRayScattererType = cctbx::xray::scatterer<>]’ 54 | init_scatterer_part(scatterers); | ^~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0) [with A0 = boost::python::objects::reference_to_value, scitbx::af::trivial_accessor>&>; Value = cctbx::xray::parameter_map >; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<1>::apply::execute(PyObject*, t0) [with Holder = boost::python::objects::value_holder > >; ArgList = boost::mpl::vector1, scitbx::af::trivial_accessor>&>; PyObject = _object; t0 = const scitbx::af::const_ref, scitbx::af::trivial_accessor>&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector1, scitbx::af::trivial_accessor>&>; Arity = boost::mpl::size, scitbx::af::trivial_accessor>&> >; Holder = boost::python::objects::value_holder > >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedT = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >; classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedVisitor = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>; W = cctbx::xray::parameter_map >; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/parameter_map.cpp:46:11: required from ‘static void cctbx::xray::boost_python::parameter_map_wrapper::wrap(const char*) [with XRayScattererType = cctbx::xray::scatterer<>]’ 45 | class_("parameter_map", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 | .def(init const &>(( | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 47 | arg("scatterers")))) | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/parameter_map.cpp:60:50: required from here 60 | parameter_map_wrapper >::wrap("parameter_map"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/parameter_map.h:61:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | for(int i_sc=0; i_sc < scatterers.size(); ++i_sc) { | ~~~~~^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/sampling_base.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/sampled_model_density.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/sampled_model_density.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/sampling_base.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/sampling_base.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/sigmaa.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/sigmaa.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/structure_factors_direct.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/structure_factors_direct.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_utils.h: In instantiation of ‘static void cctbx::xray::inelastic_form_factors::set(const scitbx::af::ref&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::henke::table]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scatterer.cpp:349:54: required from here 349 | inelastic_form_factors::set, | ^~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 426 | for (int i=0; i < scatterers.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_utils.h: In instantiation of ‘static void cctbx::xray::inelastic_form_factors::set(const scitbx::af::ref&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::sasaki::table]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scatterer.cpp:353:55: required from here 353 | inelastic_form_factors::set, | ^~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 426 | for (int i=0; i < scatterers.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scatterer_flags.cpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::xray::scatterer_flags; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scatterer_flags.cpp:142:44: required from here 140 | class_ wrapper = scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 | scatterer_flags, | ~~~~~~~~~~~~~~~~ 142 | return_internal_reference<> >::wrap("shared_scatterer_flags"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 49 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_flags.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:4: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp: In static member function ‘static std::auto_ptr cctbx::xray::boost_python::{anonymous}::scattering_type_registry_wrappers::constructor_for_pickle(const boost::python::dict&, const boost::python::list&, const cctbx::xray::scattering_type_registry::unique_counts_t&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:55:12: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 55 | std::auto_ptr self(new w_t); | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/sigmaa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/sigmaa.cpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/structure_factors_direct.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/structure_factors_direct.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/structure_factors_simple.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/structure_factors_simple.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/twin_targets.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_wrapper.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_components.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:300:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_variable_capacity::tuple_mapping_variable_capacity() [with ContainerType = scitbx::af::shared*>]’ 300 | tuple_mapping< | ^~~~~~~~~~~~~~ 301 | ContainerType, | ~~~~~~~~~~~~~~ 302 | variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_components.cpp:91:77: required from here 91 | tuple_mapping_variable_capacity *> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:300:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_variable_capacity::tuple_mapping_variable_capacity() [with ContainerType = scitbx::af::shared*>]’ 300 | tuple_mapping< | ^~~~~~~~~~~~~~ 301 | ContainerType, | ~~~~~~~~~~~~~~ 302 | variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_components.cpp:92:78: required from here 92 | tuple_mapping_variable_capacity *> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/xray/boost_python/xray_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/xray_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/observations/boost_python/observations_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/observations/boost_python/observations_ext.cpp g++ -o cctbx/xray/observations/boost_python/observations.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/observations/boost_python/observations.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/targets/shelxl_wght_ls_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/targets/shelxl_wght_ls_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match_indices.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/lookup_utils.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:14, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/string:51, from /usr/include/c++/15/bits/locale_classes.h:42, from /usr/include/c++/15/bits/ios_base.h:43, from /usr/include/c++/15/ios:46, from /usr/include/c++/15/istream:42, from /usr/include/c++/15/sstream:42, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:4: /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ g++ -o chiltbx/handle_test.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/chiltbx/handle_test.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::shared cctbx::xray::twin_targets::twin_completion::get_free_model_selection(scitbx::af::const_ref >, const scitbx::af::const_ref&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:42:50: required from here 42 | .def("get_free_model_selection", &w_t::get_free_model_selection) | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:128:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 128 | CCTBX_ASSERT( index < flags.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:128:11: note: in expansion of macro ‘CCTBX_ASSERT’ 128 | CCTBX_ASSERT( index < flags.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_intensity_abs(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:182:39: required from here 182 | .def("r_intensity_abs", &w_t::r_intensity_abs, | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:559:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 559 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:559:6: note: in expansion of macro ‘CCTBX_ASSERT’ 559 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:560:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 560 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:560:6: note: in expansion of macro ‘CCTBX_ASSERT’ 560 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:561:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 561 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:561:6: note: in expansion of macro ‘CCTBX_ASSERT’ 561 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_intensity_sq(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:189:38: required from here 189 | .def("r_intensity_sq", &w_t::r_intensity_sq, | ^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:604:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 604 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:604:6: note: in expansion of macro ‘CCTBX_ASSERT’ 604 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:605:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 605 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:605:6: note: in expansion of macro ‘CCTBX_ASSERT’ 605 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:606:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 606 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:606:6: note: in expansion of macro ‘CCTBX_ASSERT’ 606 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_amplitude_abs(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:196:39: required from here 196 | .def("r_amplitude_abs", &w_t::r_amplitude_abs, | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:649:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 649 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:649:6: note: in expansion of macro ‘CCTBX_ASSERT’ 649 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:650:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 650 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:650:6: note: in expansion of macro ‘CCTBX_ASSERT’ 650 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:651:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 651 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:651:6: note: in expansion of macro ‘CCTBX_ASSERT’ 651 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_amplitude_sq(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:203:38: required from here 203 | .def("r_amplitude_sq", &w_t::r_amplitude_sq, | ^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:697:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 697 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:697:6: note: in expansion of macro ‘CCTBX_ASSERT’ 697 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:698:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 698 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:698:6: note: in expansion of macro ‘CCTBX_ASSERT’ 698 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:699:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 699 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:699:6: note: in expansion of macro ‘CCTBX_ASSERT’ 699 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::tiny, 2> cctbx::xray::twin_targets::hemihedral_detwinner::detwin_with_model_data(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const FloatType&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:263:45: required from here 263 | result = self.detwin_with_model_data(i_obs,sig_obs,f_model,twin_fraction); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:997:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 997 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:997:19: note: in expansion of macro ‘CCTBX_ASSERT’ 997 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1003:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1003 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1003:19: note: in expansion of macro ‘CCTBX_ASSERT’ 1003 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1006:41: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1006 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1006:13: note: in expansion of macro ‘CCTBX_ASSERT’ 1006 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1010:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1010 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1010:19: note: in expansion of macro ‘CCTBX_ASSERT’ 1010 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::tiny, 2> cctbx::xray::twin_targets::hemihedral_detwinner::detwin_with_model_data(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const FloatType&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:275:45: required from here 275 | result = self.detwin_with_model_data(i_obs,sig_obs,f_model,twin_fraction); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:936:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 936 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:936:17: note: in expansion of macro ‘CCTBX_ASSERT’ 936 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:942:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 942 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:942:19: note: in expansion of macro ‘CCTBX_ASSERT’ 942 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:945:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 945 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:945:17: note: in expansion of macro ‘CCTBX_ASSERT’ 945 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:948:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 948 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:948:17: note: in expansion of macro ‘CCTBX_ASSERT’ 948 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ g++ -o chiltbx/handle_test -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread chiltbx/handle_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o cma_es/cma/cmaes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cma_es/cma/cmaes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘cctbx::xray::twin_targets::hemihedral_r_values::hemihedral_r_values(const scitbx::af::const_ref >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value&>; Value = cctbx::xray::twin_targets::hemihedral_r_values; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<5>::apply::execute(PyObject*, t0, t1, t2, t3, t4) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref >&; t2 = const cctbx::sgtbx::space_group&; t3 = const bool&; t4 = const scitbx::mat3&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; W = cctbx::xray::twin_targets::hemihedral_r_values; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:169:13: required from here 168 | class_("hemihedral_r_values", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 | .def(init< | ~~~~^~~~~~ 170 | scitbx::af::const_ref< cctbx::miller::index<> > const&, // 1 obs indices | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 | scitbx::af::const_ref< cctbx::miller::index<> > const&, // 2 calc indices | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 | sgtbx::space_group const&, // 3 space group | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | bool const&, // 4 anomalous flag | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | scitbx::mat3 const& // 5 twin law | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 | > | ~ 176 | ((arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~ 177 | arg("hkl_calc"), | ~~~~~~~~~~~~~~~~ 178 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 179 | arg("anomalous_flag"), | ~~~~~~~~~~~~~~~~~~~~~~ 180 | arg("twin_law") | ~~~~~~~~~~~~~~~ 181 | ))) | ~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:544:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 544 | for (long ii=0;ii::refine(const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/quadrature.h:523:14: required from ‘scitbx::math::quadrature::gauss_legendre_engine::gauss_legendre_engine(const int&) [with FloatType = double]’ 523 | x = refine( start_guess ); | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/twin_targets.h:1070:68: required from ‘cctbx::xray::twin_targets::single_twin_likelihood::single_twin_likelihood(const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const bool&, const bool&, const FloatType&, const FloatType&, const FloatType&, const int&) [with FloatType = double]’ 1070 | scitbx::math::quadrature::gauss_legendre_engine tmp_gle(n_quad_); | ^~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5, A6, A7, A8, A9, A10, A11, A12, A13) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; A6 = boost::python::objects::reference_to_value; A7 = boost::python::objects::reference_to_value; A8 = boost::python::objects::reference_to_value; A9 = boost::python::objects::reference_to_value; A10 = boost::python::objects::reference_to_value; A11 = boost::python::objects::reference_to_value; A12 = boost::python::objects::reference_to_value; A13 = boost::python::objects::reference_to_value; Value = cctbx::xray::twin_targets::single_twin_likelihood; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<14>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5, t6, t7, t8, t9, t10, t11, t12, t13) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector14; PyObject = _object; t0 = const double&; t1 = const double&; t2 = const double&; t3 = const double&; t4 = const double&; t5 = const double&; t6 = const double&; t7 = const double&; t8 = const bool&; t9 = const bool&; t10 = const double&; t11 = const double&; t12 = const double&; t13 = const int&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector14; NArgs = boost::mpl::size >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init; W = cctbx::xray::twin_targets::single_twin_likelihood; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/boost_python/twin_targets.cpp:343:14: required from here 342 | class_("single_twin_likelihood", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 | .def(init< | ~~~~^~~~~~ 344 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 | bool const&, bool const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | double const&, int const& | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 | > | ~ 352 | ((arg("i_obs1"), arg("s_obs1"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | arg("i_obs2"), arg("s_obs2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 | arg("f_calc1"), arg("f_calc2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 | arg("eps1"), arg("eps2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 | arg("centric1"),arg("centric2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 | arg("alpha"), arg("beta"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 | arg("twin_fraction"), arg("n_quad") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 | )) | ~~ 360 | ) | ~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/quadrature.h:546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 546 | for (int ii=0;ii >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ g++ -o cma_es/cma_es_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cma_es/cma_es_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/boost_python/compression.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc: In function ‘unsigned int dxtbx::boost_python::cbf_decompress(const char*, std::size_t, int*, std::size_t)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:124:50: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 124 | while ((j < packed_sz) && ((values - original) < values_sz)) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc: In function ‘void dxtbx::boost_python::rod_TY6_decompress(int*, const char*, const char*, int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:204:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 204 | for (size_t iy = 0; iy < slow; iy++) { | ~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:225:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 225 | for (int k = 0; k < nblock; k++) { | ~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:251:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 251 | for (int j = 0; j < nbit; j++) { | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:258:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 258 | for (int j = 0; j < BLOCKSIZE; j++) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:279:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 279 | for (int i = 0; i < nrest; i++) { | ~~^~~~~~~ g++ -o dxtbx/src/dxtbx/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/boost_python/flumpy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/boost_python/imageset_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘scitbx::af::flex_int dxtbx::boost_python::uncompress(const boost::python::api::object&, const int&, const int&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:184:21: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 184 | DXTBX_ASSERT(nn == (slow * fast)); | ~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:184:5: note: in expansion of macro ‘DXTBX_ASSERT’ 184 | DXTBX_ASSERT(nn == (slow * fast)); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp: In function ‘void dxtbx::boost_python::radial_average(scitbx::af::versa >&, scitbx::af::versa >&, const scitbx::vec2&, scitbx::af::shared, scitbx::af::shared, scitbx::af::shared, double, double, const scitbx::vec2&, const scitbx::vec2&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:219:43: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 219 | for (std::size_t y = upper_left[1]; y < lower_right[1]; y++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:220:45: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 220 | for (std::size_t x = upper_left[0]; x < lower_right[0]; x++) { g++ -o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/format/boost_python/image_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:24, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:25: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:27: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = bool; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 247 | return get_buffer_specific(obj); | ~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/nexus_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = long unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 247 | return get_buffer_specific(obj); | ~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24: required from here 141 | image_wrapper("ImageBool"); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23: required from here 142 | image_wrapper("ImageInt"); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26: required from here 143 | image_wrapper("ImageDouble"); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = unsigned char; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = bool]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24: required from here 141 | image_wrapper("ImageBool"); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = int]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23: required from here 142 | image_wrapper("ImageInt"); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = double]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26: required from here 143 | image_wrapper("ImageDouble"); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = short unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp:10:1: warning: ‘typedef’ was ignored in this declaration 10 | typedef struct cbf_handle_struct; | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = long int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = signed char; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = short int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = float; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = double; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 88 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 88 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:138:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 138 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:140:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 140 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:166:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 166 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:168:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 168 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = long unsigned int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:191:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 191 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:193:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 193 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:215:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:217:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 217 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:113:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:115:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 115 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/masking/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/goniometer_shadow_masking.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:30: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_circle(scitbx::af::ref >, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:79:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 79 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:80:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_polygon(scitbx::af::ref >, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:143:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 143 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 144 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/beam.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/crystal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘dxtbx::format::ImageBuffer dxtbx::ImageSet::get_raw_data(std::size_t)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:648:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 648 | if (data_cache_.index == index) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘dxtbx::format::Image dxtbx::ImageSet::get_raw_data_as_double(std::size_t)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1116:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1116 | if (double_raw_data_cache_.index == index) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: At global scope: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1063:20: warning: ‘virtual dxtbx::ImageSet dxtbx::ImageSet::partial_set(boost::python::api::object, std::size_t, std::size_t) const’ was hidden [-Woverloaded-virtual=] 1063 | virtual ImageSet partial_set(boost::python::object reader, | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1203:12: note: by ‘dxtbx::ImageSet dxtbx::ImageGrid::partial_set(std::size_t, std::size_t) const’ 1203 | ImageSet partial_set(std::size_t first, std::size_t last) const { | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageGrid::ImageGrid(const dxtbx::ImageSetData&, scitbx::af::int2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1139:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1139 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1139:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1139 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageGrid::ImageGrid(const dxtbx::ImageSetData&, const scitbx::af::const_ref&, scitbx::af::int2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1153:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1153 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1153:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1153 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: At global scope: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1063:20: warning: ‘virtual dxtbx::ImageSet dxtbx::ImageSet::partial_set(boost::python::api::object, std::size_t, std::size_t) const’ was hidden [-Woverloaded-virtual=] 1063 | virtual ImageSet partial_set(boost::python::object reader, | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1474:12: note: by ‘dxtbx::ImageSet dxtbx::ImageSequence::partial_set(std::size_t, std::size_t) const’ 1474 | ImageSet partial_set(std::size_t first, std::size_t last) const { | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageSequence::ImageSequence(const dxtbx::ImageSetData&, const dxtbx::ImageSet::beam_ptr&, const dxtbx::ImageSet::detector_ptr&, const dxtbx::ImageSet::goniometer_ptr&, const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1238:23: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1238 | if (data.size() != scan->get_num_images()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageSequence::ImageSequence(const dxtbx::ImageSetData&, const scitbx::af::const_ref&, const dxtbx::ImageSet::beam_ptr&, const dxtbx::ImageSet::detector_ptr&, const dxtbx::ImageSet::goniometer_ptr&, const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1277:26: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1277 | if (indices.size() != scan->get_num_images()) { | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘void dxtbx::ImageSequence::set_scan(const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1399:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1399 | if (scan->get_num_images() != size()) { | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1415:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1415 | DXTBX_ASSERT(scan->get_num_images() == size()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:1415:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1415 | DXTBX_ASSERT(scan->get_num_images() == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:469:56: required from here 469 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:471:55: required from here 471 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:473:53: required from here 473 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::BeamBase; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:249:56: required from here 249 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 250 | obj, | ~~~~ 251 | boost::python::extract(models[0])(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 | &ImageSetData::set_beam); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Detector; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:253:56: required from here 253 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 254 | obj, | ~~~~ 255 | boost::python::extract(models[1]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 | &ImageSetData::set_detector); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Goniometer; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:257:58: required from here 257 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 258 | obj, | ~~~~ 259 | boost::python::extract(models[2]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 | &ImageSetData::set_goniometer); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Scan; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:261:52: required from here 261 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 262 | obj, | ~~~~ 263 | boost::python::extract(models[3]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 | &ImageSetData::set_scan); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/detector.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_tuple(dxtbx::model::CrystalBase&, boost::python::tuple)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:119:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 119 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_list(dxtbx::model::CrystalBase&, boost::python::list)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:129:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 129 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_B_covariance_from_tuple(dxtbx::model::CrystalBase&, boost::python::api::object)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:141:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 141 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/experiment.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_tuple(dxtbx::model::Beam&, boost::python::tuple)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:209:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 209 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_list(dxtbx::model::Beam&, boost::python::list)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:219:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 219 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::PolychromaticBeamPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:302:32: warning: unused variable ‘beam’ [-Wunused-variable] 302 | const PolychromaticBeam &beam = | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static void dxtbx::model::boost_python::PolychromaticBeamPickleSuite::setstate(boost::python::api::object, boost::python::tuple)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:308:26: warning: unused variable ‘beam’ [-Wunused-variable] 308 | PolychromaticBeam &beam = boost::python::extract(obj)(); | ^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_circle(scitbx::af::ref >, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:79:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 79 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:80:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_polygon(scitbx::af::ref >, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:143:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 143 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 144 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/virtual_panel.h:28, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel_data.h:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:22: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:23: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘void dxtbx::model::boost_python::detector_detail::node_from_dict(boost::python::dict, dxtbx::model::Detector::Node*, boost::python::list, scitbx::af::ref)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 88 | DXTBX_ASSERT(used.size() == boost::python::len(panels)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:9: note: in expansion of macro ‘DXTBX_ASSERT’ 88 | DXTBX_ASSERT(used.size() == boost::python::len(panels)); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 89 | DXTBX_ASSERT(idx < boost::python::len(panels)); | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:9: note: in expansion of macro ‘DXTBX_ASSERT’ 89 | DXTBX_ASSERT(idx < boost::python::len(panels)); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:100:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 100 | for (std::size_t i = 0; i < boost::python::len(obj["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:124:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 124 | for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:134:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 134 | for (std::size_t i = 0; i < boost::python::len(panels); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict, const dxtbx::format::Image&, const dxtbx::format::Image&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:158:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 158 | for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:168:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 168 | for (std::size_t i = 0; i < boost::python::len(panels); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In static member function ‘static void dxtbx::model::boost_python::detector_detail::DetectorPickleSuite::copy_node(dxtbx::model::Detector::Node::pointer, boost::python::dict, boost::python::list)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:228:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 228 | for (std::size_t i = 0; i < boost::python::len(node["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment.cc:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:23: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:25: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:19: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/experiment_list.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment_list.h:23, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:23: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment.h:25: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/experiment_list.h:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList* dxtbx::model::boost_python::make_experiment_list(boost::python::api::object)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:30:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 30 | for (std::size_t i = 0; i < boost::python::len(items); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_setitem(dxtbx::model::ExperimentList&, int, dxtbx::model::Experiment)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:174:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 174 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::Experiment& dxtbx::model::boost_python::experiment_list_getitem(dxtbx::model::ExperimentList&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:184:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList dxtbx::model::boost_python::experiment_list_getitem_slice(const dxtbx::model::ExperimentList&, boost::python::slice)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:193:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 193 | for (std::size_t i = as.start; i < as.stop && i < self.size(); i += as.step) { | ~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_delitem(dxtbx::model::ExperimentList&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:203:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 203 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/model_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/goniometer.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_tuple(dxtbx::model::Goniometer&, boost::python::tuple)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:79:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 79 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_list(dxtbx::model::Goniometer&, boost::python::list)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 89 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/panel.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/parallax_correction.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/goniometer.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:16: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc: In function ‘T* dxtbx::model::boost_python::from_dict(boost::python::dict) [with T = dxtbx::model::MultiAxisGoniometer]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:105:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 105 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/virtual_panel.h:28, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel_data.h:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:21: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/scan.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/virtual_panel.h:28, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel_data.h:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc:14: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/spectrum.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cbflib_adaptbx -I/usr/include/python3.13 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:19: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec2.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:17: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In static member function ‘static void dxtbx::model::boost_python::ScanPickleSuite::setstate(dxtbx::model::Scan&, boost::python::tuple)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:162:41: warning: comparison of integer expressions of different signedness: ‘boost::python::ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 162 | DXTBX_ASSERT(len(properties_dict) == ncols); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:162:7: note: in expansion of macro ‘DXTBX_ASSERT’ 162 | DXTBX_ASSERT(len(properties_dict) == ncols); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In function ‘boost::python::dict dxtbx::model::boost_python::MaptoPythonDict(dxtbx::model::ExpImgRangeMap)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:187:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | for (int k = 0; k < val.size(); ++k) { | ~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In function ‘boost::python::list dxtbx::model::boost_python::get_valid_image_ranges(dxtbx::model::Scan&, std::string)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:374:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 374 | for (int k = 0; k < ranges.size(); ++k) { | ~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:24: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘T* dxtbx::af::flex_table_suite::make_flex_table(boost::python::list) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1233:42: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:416:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 416 | for (std::size_t i = 0; i < len(columns); ++i) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::setitem_row(T&, typename T::size_type, boost::python::dict) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; typename T::size_type = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1252:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:525:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 525 | for (std::size_t i = 0; i < len(row); ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘T dxtbx::af::flex_table_suite::select_cols_tuple(const T&, boost::python::tuple) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1265:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:747:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 747 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::set_selected_cols_tuple(T&, boost::python::tuple, const T&) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1269:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1266 | .def("set_selected", &set_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1267 | .def("set_selected", &set_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1268 | .def("set_selected", &set_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1269 | .def("set_selected", &set_selected_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:838:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 838 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::del_selected_cols_tuple(T&, boost::python::tuple) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1273:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1266 | .def("set_selected", &set_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1267 | .def("set_selected", &set_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1268 | .def("set_selected", &set_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1269 | .def("set_selected", &set_selected_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1270 | .def("del_selected", &del_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1271 | .def("del_selected", &del_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1272 | .def("del_selected", &del_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1273 | .def("del_selected", &del_selected_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:890:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 890 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc:16: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/spectrum.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ g++ -o lib/libcbf-private.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcbf-private.so.0 cbflib_adaptbx/detectors/mar_adaptor.o cbflib_adaptbx/detectors/cbf_adaptor.o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o cbflib_adaptbx/detectors/buffer_based_service.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lhdf5 -lcbf g++ -o exe_dev/cctbx.convert_ccp4_symop_lib -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/convert_ccp4_symop_lib.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libcbf-private.so.0.0.1' 'lib/libcbf-private.so.0'->'lib/libcbf-private.so.0.0.1' 'lib/libcbf-private.so'->'lib/libcbf-private.so.0.0.1' g++ -o exe_dev/cbflib.tst_memory -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cbflib_adaptbx/detectors/tst_memory.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lcbf -lcbf-private -lm -lhdf5 g++ -o exe_dev/cctbx.find_distances -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/find_distances.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.getting_started -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/getting_started.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.lattice_symmetry -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/lattice_symmetry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.sym_equiv_sites -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sym_equiv_sites.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.sys_abs_equiv_space_groups -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sys_abs_equiv_space_groups.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o fable/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/font_ucs_10x20.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_10x20.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/font_ucs_8x13.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_8x13.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/font_ucs_9x15.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/font_ucs_9x15.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/fonts_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/fonts_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string.hpp:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/str_ref.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/format.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp: In function ‘unsigned int fable::ext::get_code_stop(const boost::python::api::object&, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp:24:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 24 | TBXX_ASSERT(stop <= len_code); | ~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’ 59 | if (!(condition)) { \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp: In function ‘int fable::ext::floating_point_scan_after_dot(const boost::python::api::object&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/ext.cpp:71:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 71 | if (i < code_stop) { | ~~^~~~~~~~~~~ g++ -o gltbx/gl_defines_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_02_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_03_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_04_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_05_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_06_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_defines_07_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/gl_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_02_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_03_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_04_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_05_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_06_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:23: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table::insert_visitor::operator()(T&) const [with T = scitbx::af::shared >; VarientType = boost::variant, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/scan.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec2&’ to ‘void scitbx::af::shared_plain::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec2]’ declared here 124 | void insert(ElementType* pos, size_type const& n, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘’ declared here 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table::insert_visitor::operator()(T&) const [with T = scitbx::af::shared >; VarientType = boost::variant, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 124 | void insert(ElementType* pos, size_type const& n, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘’ declared here 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ^~~~~~~~~~~~ g++ -o gltbx/gl_functions_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_07_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized] 905 | type_list.append(object(handle<>(PyObject_Type(object(a).ptr())))); | ^~~~~~~~~ In file included from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:11: /usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec2&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec2]’ declared here 246 | explicit object(T const& x) | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here 904 | typename U::value_type a = typename U::value_type(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized] 905 | type_list.append(object(handle<>(PyObject_Type(object(a).ptr())))); | ^~~~~~~~~ /usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec3&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec3]’ declared here 246 | explicit object(T const& x) | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here 904 | typename U::value_type a = typename U::value_type(); | ^ g++ -o gltbx/gl_functions_08_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_08_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_09_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_09_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_10_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_10_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_11_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_11_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_12_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_12_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_13_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_13_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_14_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_14_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_15_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/gl_functions_15_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_defines_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_defines_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_defines_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/glu_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_02_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 gltbx/glu_functions_03_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/quadrics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/quadrics_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/util_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/util_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/viewer_utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/gltbx/viewer_utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/ccp4_map/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/cif/boost_python/cif_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/cif/boost_python/cif_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_set_grid(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:178:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 178 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:213:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 213 | for (int i = 0; i < data_ref.accessor()[0]; i++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 215 | for (int j = 0; j < data_ref.accessor()[1]; j++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:216:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 216 | for (int k = 0; k < data_ref.accessor()[2]; k++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_box(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:245:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:278:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 278 | for (int i = 0; i < data_ref.accessor()[0]; i++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:280:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 280 | for (int j = 0; j < data_ref.accessor()[1]; j++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:281:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 281 | for (int k = 0; k < data_ref.accessor()[2]; k++) { /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_p1_cell(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::int3&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/ccp4_map/ext.cpp:311:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 311 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ g++ -o iotbx/detectors/bruker.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/bruker.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/bruker_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/bruker_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/detectors_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/detectors_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/image_divider.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/image_divider.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/dsn6/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/dsn6/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/misc/boost_python/dtrek_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/misc/boost_python/dtrek_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/misc/boost_python/scalepack_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/misc/boost_python/scalepack_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/batch_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/column.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/column_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/crystal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.cpp: In member function ‘void iotbx::mtz::column::set_reals(const scitbx::af::const_ref&, const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.cpp:253:48: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 253 | IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.cpp:253:5: note: in expansion of macro ‘IOTBX_ASSERT’ 253 | IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry); | ^~~~~~~~~~~~ g++ -o iotbx/mtz/crystal_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o iotbx/mtz/dataset.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/dataset_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch_bpl.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::batch; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch_bpl.cpp:78:60: required from here 78 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 79 | "shared_batch"); | ~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/mtz/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/mtz/object.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/object_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column_bpl.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::column; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/column_bpl.cpp:76:60: required from here 76 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 77 | "shared_column"); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/hendrickson_lattman.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/sym_equiv.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/miller/asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal_bpl.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::crystal; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal_bpl.cpp:42:60: required from here 42 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 43 | "shared_crystal"); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp: In member function ‘void iotbx::mtz::object::replace_miller_indices(const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:433:40: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 433 | IOTBX_ASSERT(miller_indices.size() == n_reflections()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:433:5: note: in expansion of macro ‘IOTBX_ASSERT’ 433 | IOTBX_ASSERT(miller_indices.size() == n_reflections()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:435:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 435 | for(int i_refl=0;i_refl iotbx::mtz::object::extract_integers(const scitbx::af::const_ref&, const char*) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:624:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 624 | for(int i=0;i iotbx::mtz::object::extract_reals(const scitbx::af::const_ref&, const char*) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.cpp:684:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 684 | for(int i=0;i&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/atom_selection.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::dataset; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset_bpl.cpp:43:60: required from here 43 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 44 | "shared_dataset"); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object_bpl.cpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o iotbx/pdb/common_residue_names_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/common_residue_names_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/construct_hierarchy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/construct_hierarchy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/construct_hierarchy.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_atom_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atom_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_atoms.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:5: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ g++ -o iotbx/pdb/hierarchy_atoms_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp:242:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 242 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp: In function ‘std::auto_ptr iotbx::pdb::hierarchy::atoms::reset_tmp(const scitbx::af::const_ref&, int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp:248:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 248 | std::auto_ptr result(new atom_tmp_sentinel(atoms)); | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp: At global scope: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp:257:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 257 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp: In function ‘std::auto_ptr iotbx::pdb::hierarchy::atoms::reset_tmp_for_occupancy_groups_simple(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.cpp:261:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 261 | std::auto_ptr result(new atom_tmp_sentinel(atoms)); | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_select.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_select.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_select.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hierarchy_write.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_write.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_ext.cpp:4: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer_flags.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:4: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_write.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp: In function ‘void iotbx::pdb::hierarchy::atoms::bpl_wrap()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:84:17: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 84 | std::auto_ptr, | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:5: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/function/function_base.hpp:28, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::pdb::hierarchy::atom; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:87:36: required from here 87 | class_ wa = wat::wrap("af_shared_atom"); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::pdb::hierarchy::atom_with_labels; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:91:44: required from here 91 | class_ wawl = wawl_t::wrap("af_shared_atom_with_labels"); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o iotbx/pdb/hybrid_36_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hybrid_36_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ gcc -o iotbx/pdb/hybrid_36_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hybrid_36_c.c g++ -o iotbx/pdb/hybrid_36_cpp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hybrid_36_cpp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hybrid_36_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable iotbx/pdb/hybrid_36_fem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/input.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem.hpp:10, from iotbx/pdb/hybrid_36_fem.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/file_utils.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 24 | while (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | while (i < size && data[i] != '\n' && data[i] != '\r') i++; | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 27 | if (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28 | if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') { | ~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | if (j < size) { | ~~^~~~~~ g++ -o iotbx/pdb/input_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/input_write.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input_write.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/input_write.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hybrid_36_fem -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread iotbx/pdb/hybrid_36_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o iotbx/pdb/overall_counts.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/overall_counts.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/rna_dna_atom_names_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/rna_dna_atom_names_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/overall_counts.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/write_utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.cpp: In destructor ‘iotbx::pdb::write_utils::fstream_open_close::~fstream_open_close()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.cpp:42:7: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 42 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 43 | "Failure writing to file: \"" + file_name + "\""); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/write_utils.cpp:42:7: note: in C++11 destructors default to ‘noexcept’ g++ -o iotbx/pdb/xray_structure_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/xray_structure_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/shelx/shelx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/shelx/shelx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/wildcard_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/wildcard_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/xplor/boost_python/xplor_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/xplor/boost_python/xplor_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/xray_structure.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/pdb/xray_structure_bpl.cpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o lib/libann_adaptor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libann_adaptor.so.0 annlib_adaptbx/ann/ann_adaptor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lann-cctbx /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libann_adaptor.so.0.0.1' 'lib/libann_adaptor.so.0'->'lib/libann_adaptor.so.0.0.1' 'lib/libann_adaptor.so'->'lib/libann_adaptor.so.0.0.1' g++ -o lib/annlib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=annlib_ext.so.0 annlib_adaptbx/ann/boost_python/annlib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lann-cctbx -lann_adaptor -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/annlib_ext.so.0.0.1' 'lib/annlib_ext.so.0'->'lib/annlib_ext.so.0.0.1' 'lib/annlib_ext.so'->'lib/annlib_ext.so.0.0.1' g++ -o lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_boost_thread_test_ext.so.0 boost_adaptbx/tests/boost_thread_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' 'lib/boost_adaptbx_boost_thread_test_ext.so.0'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' 'lib/boost_adaptbx_boost_thread_test_ext.so'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_breadth_first_search_ext.so.0 boost_adaptbx/graph/breadth_first_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_clustering_algorithm_ext.so.0 boost_adaptbx/graph/clustering_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_connected_component_algorithm_ext.so.0 boost_adaptbx/graph/connected_component_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' 'lib/boost_adaptbx_graph_breadth_first_search_ext.so'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_ext.so.0 boost_adaptbx/graph/graph_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' Create symlinks for: 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so'->'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_graph_structure_comparison_ext.so.0 boost_adaptbx/graph/graph_structure_comparison_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_maximum_clique_ext.so.0 boost_adaptbx/graph/maximum_clique_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/boost_adaptbx_graph_metric_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_metric_ext.so.0 boost_adaptbx/graph/metric_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' 'lib/boost_adaptbx_graph_metric_ext.so.0'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' 'lib/boost_adaptbx_graph_metric_ext.so'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' Create symlinks for: 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' 'lib/boost_adaptbx_graph_maximum_clique_ext.so'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_min_cut_max_flow_ext.so.0 boost_adaptbx/graph/min_cut_max_flow_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/boost_adaptbx_graph_utility_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_utility_ext.so.0 boost_adaptbx/graph/utility_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' 'lib/boost_adaptbx_graph_utility_ext.so.0'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' 'lib/boost_adaptbx_graph_utility_ext.so'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' Create symlinks for: 'lib/boost_adaptbx_graph_ext.so.0.0.1' 'lib/boost_adaptbx_graph_ext.so.0'->'lib/boost_adaptbx_graph_ext.so.0.0.1' 'lib/boost_adaptbx_graph_ext.so'->'lib/boost_adaptbx_graph_ext.so.0.0.1' g++ -o lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_python_streambuf_test_ext.so.0 boost_adaptbx/tests/python_streambuf_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer Create symlinks for: 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_timer.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/boost_optional_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_optional_ext.so.0 boost_adaptbx/optional_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer g++ -o lib/boost_python_hybrid_times_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_hybrid_times_ext.so.0 boost_adaptbx/hybrid_times_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_timer.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' 'lib/boost_adaptbx_python_streambuf_test_ext.so.0'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' 'lib/boost_adaptbx_python_streambuf_test_ext.so'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' g++ -o lib/boost_python_meta_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_meta_ext.so.0 boost_adaptbx/meta_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer Create symlinks for: 'lib/boost_optional_ext.so.0.0.1' 'lib/boost_optional_ext.so.0'->'lib/boost_optional_ext.so.0.0.1' 'lib/boost_optional_ext.so'->'lib/boost_optional_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/boost_rational_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_rational_ext.so.0 boost_adaptbx/rational_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_timer.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/boost_python_hybrid_times_ext.so.0.0.1' 'lib/boost_python_hybrid_times_ext.so.0'->'lib/boost_python_hybrid_times_ext.so.0.0.1' 'lib/boost_python_hybrid_times_ext.so'->'lib/boost_python_hybrid_times_ext.so.0.0.1' g++ -o lib/boost_tuple_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_tuple_ext.so.0 boost_adaptbx/tuple_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_timer.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/boost_python_meta_ext.so.0.0.1' 'lib/boost_python_meta_ext.so.0'->'lib/boost_python_meta_ext.so.0.0.1' 'lib/boost_python_meta_ext.so'->'lib/boost_python_meta_ext.so.0.0.1' g++ -o lib/cbflib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cbflib_ext.so.0 cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lcbf-private -lcbf -lboost_thread -lboost_system -lboost_python313 -lm -lhdf5 Create symlinks for: 'lib/boost_rational_ext.so.0.0.1' 'lib/boost_rational_ext.so.0'->'lib/boost_rational_ext.so.0.0.1' 'lib/boost_rational_ext.so'->'lib/boost_rational_ext.so.0.0.1' g++ -o lib/libccp4io.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libccp4io.so.0 ccp4io_adaptbx/fortran_call_stubs.o ccp4io_adaptbx/printf_wrappers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lm -lccp4c Create symlinks for: 'lib/boost_tuple_ext.so.0.0.1' 'lib/boost_tuple_ext.so.0'->'lib/boost_tuple_ext.so.0.0.1' 'lib/boost_tuple_ext.so'->'lib/boost_tuple_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libccp4io.so.0.0.1' 'lib/libccp4io.so.0'->'lib/libccp4io.so.0.0.1' 'lib/libccp4io.so'->'lib/libccp4io.so.0.0.1' g++ -o scitbx/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/utils.cpp g++ -o lib/ccp4io_adaptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=ccp4io_adaptbx_ext.so.0 ccp4io_adaptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lccp4io -lccp4c -lssm -lmmdb2 -lboost_thread -lboost_system -lboost_python313 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o scitbx/boost_python/slice.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/slice.cpp Create symlinks for: 'lib/cbflib_ext.so.0.0.1' 'lib/cbflib_ext.so.0'->'lib/cbflib_ext.so.0.0.1' 'lib/cbflib_ext.so'->'lib/cbflib_ext.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libssm.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libmmdb2.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o scitbx/array_family/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/ccp4io_adaptbx_ext.so.0.0.1' 'lib/ccp4io_adaptbx_ext.so.0'->'lib/ccp4io_adaptbx_ext.so.0.0.1' 'lib/ccp4io_adaptbx_ext.so'->'lib/ccp4io_adaptbx_ext.so.0.0.1' g++ -o lib/cma_es_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cma_es_ext.so.0 cma_es/cma_es_ext.o cma_es/cma/cmaes.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cma_es_ext.so.0.0.1' 'lib/cma_es_ext.so.0'->'lib/cma_es_ext.so.0.0.1' 'lib/cma_es_ext.so'->'lib/cma_es_ext.so.0.0.1' g++ -o lib/dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_ext.so.0 dxtbx/src/dxtbx/boost_python/ext.o dxtbx/src/dxtbx/boost_python/compression.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/dxtbx_ext.so.0.0.1' 'lib/dxtbx_ext.so.0'->'lib/dxtbx_ext.so.0.0.1' 'lib/dxtbx_ext.so'->'lib/dxtbx_ext.so.0.0.1' g++ -o lib/dxtbx_format_image_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_image_ext.so.0 dxtbx/src/dxtbx/format/boost_python/image_ext.o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5 /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/utils.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/utils.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/dxtbx_format_image_ext.so.0.0.1' 'lib/dxtbx_format_image_ext.so.0'->'lib/dxtbx_format_image_ext.so.0.0.1' 'lib/dxtbx_format_image_ext.so'->'lib/dxtbx_format_image_ext.so.0.0.1' g++ -o lib/dxtbx_format_nexus_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_nexus_ext.so.0 dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5 /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/fable_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=fable_ext.so.0 fable/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/iotbx_ccp4_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_ccp4_map_ext.so.0 iotbx/ccp4_map/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lccp4c -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/dxtbx_format_nexus_ext.so.0.0.1' 'lib/dxtbx_format_nexus_ext.so.0'->'lib/dxtbx_format_nexus_ext.so.0.0.1' 'lib/dxtbx_format_nexus_ext.so'->'lib/dxtbx_format_nexus_ext.so.0.0.1' g++ -o ucif/cifParser.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ucif/cifParser.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/fable_ext.so.0.0.1' 'lib/fable_ext.so.0'->'lib/fable_ext.so.0.0.1' 'lib/fable_ext.so'->'lib/fable_ext.so.0.0.1' g++ -o ucif/cifLexer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/ucif/cifLexer.cpp Create symlinks for: 'lib/iotbx_ccp4_map_ext.so.0.0.1' 'lib/iotbx_ccp4_map_ext.so.0'->'lib/iotbx_ccp4_map_ext.so.0.0.1' 'lib/iotbx_ccp4_map_ext.so'->'lib/iotbx_ccp4_map_ext.so.0.0.1' g++ -o lib/iotbx_detectors_bruker_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_bruker_ext.so.0 iotbx/detectors/bruker_ext.o iotbx/detectors/bruker.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/iotbx_detectors_bruker_ext.so.0.0.1' 'lib/iotbx_detectors_bruker_ext.so.0'->'lib/iotbx_detectors_bruker_ext.so.0.0.1' 'lib/iotbx_detectors_bruker_ext.so'->'lib/iotbx_detectors_bruker_ext.so.0.0.1' g++ -o lib/iotbx_detectors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_ext.so.0 iotbx/detectors/detectors_ext.o iotbx/detectors/image_divider.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/iotbx_dsn6_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dsn6_map_ext.so.0 iotbx/dsn6/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/iotbx_dsn6_map_ext.so.0.0.1' 'lib/iotbx_dsn6_map_ext.so.0'->'lib/iotbx_dsn6_map_ext.so.0.0.1' 'lib/iotbx_dsn6_map_ext.so'->'lib/iotbx_dsn6_map_ext.so.0.0.1' Create symlinks for: 'lib/iotbx_detectors_ext.so.0.0.1' 'lib/iotbx_detectors_ext.so.0'->'lib/iotbx_detectors_ext.so.0.0.1' 'lib/iotbx_detectors_ext.so'->'lib/iotbx_detectors_ext.so.0.0.1' g++ -o lib/iotbx_dtrek_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dtrek_ext.so.0 iotbx/misc/boost_python/dtrek_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/libiotbx_mtz.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_mtz.so.0 iotbx/mtz/object.o iotbx/mtz/crystal.o iotbx/mtz/dataset.o iotbx/mtz/column.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lccp4io -lccp4c -lm -lboost_thread -lboost_system /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/iotbx_dtrek_ext.so.0.0.1' 'lib/iotbx_dtrek_ext.so.0'->'lib/iotbx_dtrek_ext.so.0.0.1' 'lib/iotbx_dtrek_ext.so'->'lib/iotbx_dtrek_ext.so.0.0.1' g++ -o lib/libiotbx_pdb.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_pdb.so.0 iotbx/pdb/hybrid_36_c.o iotbx/pdb/hybrid_36_cpp.o iotbx/pdb/utils.o iotbx/pdb/write_utils.o iotbx/pdb/hierarchy.o iotbx/pdb/hierarchy_select.o iotbx/pdb/hierarchy_atoms.o iotbx/pdb/construct_hierarchy.o iotbx/pdb/overall_counts.o iotbx/pdb/hierarchy_write.o iotbx/pdb/atom_selection.o iotbx/pdb/input.o iotbx/pdb/input_write.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o lib/iotbx_scalepack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_scalepack_ext.so.0 iotbx/misc/boost_python/scalepack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/libiotbx_mtz.so.0.0.1' 'lib/libiotbx_mtz.so.0'->'lib/libiotbx_mtz.so.0.0.1' 'lib/libiotbx_mtz.so'->'lib/libiotbx_mtz.so.0.0.1' g++ -o lib/iotbx_wildcard_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_wildcard_ext.so.0 iotbx/wildcard_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/iotbx_shelx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_shelx_ext.so.0 iotbx/shelx/shelx_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/iotbx_scalepack_ext.so.0.0.1' 'lib/iotbx_scalepack_ext.so.0'->'lib/iotbx_scalepack_ext.so.0.0.1' 'lib/iotbx_scalepack_ext.so'->'lib/iotbx_scalepack_ext.so.0.0.1' g++ -o lib/iotbx_xplor_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_xplor_ext.so.0 iotbx/xplor/boost_python/xplor_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_xplor -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_wildcard_ext.so.0.0.1' 'lib/iotbx_wildcard_ext.so.0'->'lib/iotbx_wildcard_ext.so.0.0.1' 'lib/iotbx_wildcard_ext.so'->'lib/iotbx_wildcard_ext.so.0.0.1' Create symlinks for: 'lib/iotbx_shelx_ext.so.0.0.1' 'lib/iotbx_shelx_ext.so.0'->'lib/iotbx_shelx_ext.so.0.0.1' 'lib/iotbx_shelx_ext.so'->'lib/iotbx_shelx_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o spotfinder/dxtbx_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/dxtbx_toolbox/libdistl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/dxtbx_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/dxtbx_toolbox/distl.cpp g++ -o lib/iotbx_cif_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_cif_ext.so.0 iotbx/cif/boost_python/cif_ext.o ucif/cifParser.o ucif/cifLexer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lantlr3c cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/spot.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/spot.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/iotbx_xplor_ext.so.0.0.1' 'lib/iotbx_xplor_ext.so.0'->'lib/iotbx_xplor_ext.so.0.0.1' 'lib/iotbx_xplor_ext.so'->'lib/iotbx_xplor_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/libdistl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libantlr3c.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libiotbx_pdb.so.0.0.1' 'lib/libiotbx_pdb.so.0'->'lib/libiotbx_pdb.so.0.0.1' 'lib/libiotbx_pdb.so'->'lib/libiotbx_pdb.so.0.0.1' g++ -o spotfinder/core_toolbox/hough.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/hough.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/iotbx_cif_ext.so.0.0.1' 'lib/iotbx_cif_ext.so.0'->'lib/iotbx_cif_ext.so.0.0.1' 'lib/iotbx_cif_ext.so'->'lib/iotbx_cif_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/distl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libscitbx_boost_python.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -shared -rdynamic -std=c++14 -Wl,-soname=libscitbx_boost_python.so.0 scitbx/boost_python/utils.o scitbx/boost_python/slice.o scitbx/array_family/boost_python/utils.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libscitbx_boost_python.so.0.0.1' 'lib/libscitbx_boost_python.so.0'->'lib/libscitbx_boost_python.so.0.0.1' 'lib/libscitbx_boost_python.so'->'lib/libscitbx_boost_python.so.0.0.1' g++ -o lib/cctbx_adptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adptbx_ext.so.0 cctbx/adptbx/boost_python/adptbx_ext.o cctbx/adptbx/boost_python/hirshfeld.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_fp_fdp_ext.so.0 cctbx/eltbx/boost_python/fp_fdp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_adptbx_ext.so.0.0.1' 'lib/cctbx_adptbx_ext.so.0'->'lib/cctbx_adptbx_ext.so.0.0.1' 'lib/cctbx_adptbx_ext.so'->'lib/cctbx_adptbx_ext.so.0.0.1' g++ -o lib/cctbx_maptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_ext.so.0 cctbx/maptbx/boost_python/maptbx_ext.o cctbx/maptbx/boost_python/grid_indices_around_sites.o cctbx/maptbx/boost_python/grid_tags.o cctbx/maptbx/boost_python/gridding.o cctbx/maptbx/boost_python/misc.o cctbx/maptbx/boost_python/peak_search.o cctbx/maptbx/boost_python/pymol_interface.o cctbx/maptbx/boost_python/statistics.o cctbx/maptbx/boost_python/structure_factors.o cctbx/maptbx/boost_python/coordinate_transformers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' 'lib/cctbx_eltbx_fp_fdp_ext.so.0'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' 'lib/cctbx_eltbx_fp_fdp_ext.so'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' g++ -o lib/cctbx_geometry_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_restraints_ext.so.0 cctbx/geometry_restraints/geometry_restraints_ext.o cctbx/geometry_restraints/bond_bpl.o cctbx/geometry_restraints/bond_similarity_bpl.o cctbx/geometry_restraints/bond_sorted_bpl.o cctbx/geometry_restraints/nonbonded_bpl.o cctbx/geometry_restraints/nonbonded_sorted_bpl.o cctbx/geometry_restraints/angle_bpl.o cctbx/geometry_restraints/dihedral_bpl.o cctbx/geometry_restraints/chirality_bpl.o cctbx/geometry_restraints/planarity_bpl.o cctbx/geometry_restraints/parallelity_bpl.o cctbx/geometry_restraints/motif_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_maptbx_ext.so.0.0.1' 'lib/cctbx_maptbx_ext.so.0'->'lib/cctbx_maptbx_ext.so.0.0.1' 'lib/cctbx_maptbx_ext.so'->'lib/cctbx_maptbx_ext.so.0.0.1' g++ -o lib/cctbx_xray_observations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_observations_ext.so.0 cctbx/xray/observations/boost_python/observations.o cctbx/xray/observations/boost_python/observations_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/cctbx_eltbx_henke_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_henke_ext.so.0 cctbx/eltbx/boost_python/henke_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_xray_observations_ext.so.0.0.1' 'lib/cctbx_xray_observations_ext.so.0'->'lib/cctbx_xray_observations_ext.so.0.0.1' 'lib/cctbx_xray_observations_ext.so'->'lib/cctbx_xray_observations_ext.so.0.0.1' g++ -o lib/cctbx_crystal_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_crystal_ext.so.0 cctbx/crystal/crystal_ext.o cctbx/crystal/asu_clusters_bpl.o cctbx/crystal/close_packing_bpl.o cctbx/crystal/coordination_sequences_bpl.o cctbx/crystal/direct_space_asu_bpl.o cctbx/crystal/incremental_pairs_bpl.o cctbx/crystal/neighbors_bpl.o cctbx/crystal/pair_tables_bpl.o cctbx/crystal/site_cluster_analysis_bpl.o cctbx/crystal/symmetry_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_henke_ext.so.0.0.1' 'lib/cctbx_eltbx_henke_ext.so.0'->'lib/cctbx_eltbx_henke_ext.so.0.0.1' 'lib/cctbx_eltbx_henke_ext.so'->'lib/cctbx_eltbx_henke_ext.so.0.0.1' g++ -o lib/cctbx_statistics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_statistics_ext.so.0 cctbx/boost_python/statistics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/cctbx_eltbx_wavelengths_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_wavelengths_ext.so.0 cctbx/eltbx/boost_python/wavelengths_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_statistics_ext.so.0.0.1' 'lib/cctbx_statistics_ext.so.0'->'lib/cctbx_statistics_ext.so.0.0.1' 'lib/cctbx_statistics_ext.so'->'lib/cctbx_statistics_ext.so.0.0.1' g++ -o lib/cctbx_orientation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_orientation_ext.so.0 cctbx/boost_python/orientation_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' 'lib/cctbx_eltbx_wavelengths_ext.so.0'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' 'lib/cctbx_eltbx_wavelengths_ext.so'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_covalent_radii_ext.so.0 cctbx/eltbx/boost_python/covalent_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_orientation_ext.so.0.0.1' 'lib/cctbx_orientation_ext.so.0'->'lib/cctbx_orientation_ext.so.0.0.1' 'lib/cctbx_orientation_ext.so'->'lib/cctbx_orientation_ext.so.0.0.1' g++ -o lib/cctbx_adp_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adp_restraints_ext.so.0 cctbx/adp_restraints/adp_restraints_bpl.o cctbx/adp_restraints/adp_restraints_ext.o cctbx/adp_restraints/rigid_bond_bpl.o cctbx/adp_restraints/rigu_bpl.o cctbx/adp_restraints/adp_similarity_bpl.o cctbx/adp_restraints/isotropic_adp_bpl.o cctbx/adp_restraints/aniso_restraints_bpl.o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_covalent_radii_ext.so.0'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_covalent_radii_ext.so'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' g++ -o lib/dxtbx_masking_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_masking_ext.so.0 dxtbx/src/dxtbx/masking/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5 /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/dxtbx_masking_ext.so.0.0.1' 'lib/dxtbx_masking_ext.so.0'->'lib/dxtbx_masking_ext.so.0.0.1' 'lib/dxtbx_masking_ext.so'->'lib/dxtbx_masking_ext.so.0.0.1' g++ -o lib/cctbx_translation_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_translation_search_ext.so.0 cctbx/translation_search/boost_python/translation_search_ext.o cctbx/translation_search/boost_python/fast_nv1995.o cctbx/translation_search/boost_python/fast_terms.o cctbx/translation_search/boost_python/symmetry_flags.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_geometry_restraints_ext.so.0.0.1' 'lib/cctbx_geometry_restraints_ext.so.0'->'lib/cctbx_geometry_restraints_ext.so.0.0.1' 'lib/cctbx_geometry_restraints_ext.so'->'lib/cctbx_geometry_restraints_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_crystal_ext.so.0.0.1' 'lib/cctbx_crystal_ext.so.0'->'lib/cctbx_crystal_ext.so.0.0.1' 'lib/cctbx_crystal_ext.so'->'lib/cctbx_crystal_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_neutron_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_neutron_ext.so.0 cctbx/eltbx/boost_python/neutron_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_adp_restraints_ext.so.0.0.1' 'lib/cctbx_adp_restraints_ext.so.0'->'lib/cctbx_adp_restraints_ext.so.0.0.1' 'lib/cctbx_adp_restraints_ext.so'->'lib/cctbx_adp_restraints_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/cctbx_dmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_dmtbx_ext.so.0 cctbx/dmtbx/boost_python/dmtbx_ext.o cctbx/dmtbx/boost_python/triplet_phase_relation.o cctbx/dmtbx/boost_python/triplet_generator.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/cctbx_sgtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_ext.so.0 cctbx/sgtbx/boost_python/sgtbx_ext.o cctbx/sgtbx/boost_python/brick.o cctbx/sgtbx/boost_python/change_of_basis.o cctbx/sgtbx/boost_python/find_affine.o cctbx/sgtbx/boost_python/lattice_symmetry.o cctbx/sgtbx/boost_python/phase_info.o cctbx/sgtbx/boost_python/reciprocal_space_asu.o cctbx/sgtbx/boost_python/rot_mx.o cctbx/sgtbx/boost_python/rt_mx.o cctbx/sgtbx/boost_python/search_symmetry.o cctbx/sgtbx/boost_python/seminvariant.o cctbx/sgtbx/boost_python/site_symmetry.o cctbx/sgtbx/boost_python/space_group.o cctbx/sgtbx/boost_python/space_group_type.o cctbx/sgtbx/boost_python/sym_equiv_sites.o cctbx/sgtbx/boost_python/symbols.o cctbx/sgtbx/boost_python/tensor_rank_2.o cctbx/sgtbx/boost_python/tensors.o cctbx/sgtbx/boost_python/tr_vec.o cctbx/sgtbx/boost_python/wyckoff.o cctbx/sgtbx/boost_python/select_generators.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_eltbx_neutron_ext.so.0.0.1' 'lib/cctbx_eltbx_neutron_ext.so.0'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1' 'lib/cctbx_eltbx_neutron_ext.so'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_tiny_pse_ext.so.0 cctbx/eltbx/boost_python/tiny_pse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_translation_search_ext.so.0.0.1' 'lib/cctbx_translation_search_ext.so.0'->'lib/cctbx_translation_search_ext.so.0.0.1' 'lib/cctbx_translation_search_ext.so'->'lib/cctbx_translation_search_ext.so.0.0.1' g++ -o lib/gltbx_glu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_glu_ext.so.0 gltbx/glu_ext.o gltbx/glu_defines_00_bpl.o gltbx/glu_defines_01_bpl.o gltbx/glu_functions_00_bpl.o gltbx/glu_functions_01_bpl.o gltbx/glu_functions_02_bpl.o gltbx/glu_functions_03_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm g++ -o lib/cctbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_math_ext.so.0 cctbx/math/boost_python/math_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGLU.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGL.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_dmtbx_ext.so.0.0.1' 'lib/cctbx_dmtbx_ext.so.0'->'lib/cctbx_dmtbx_ext.so.0.0.1' 'lib/cctbx_dmtbx_ext.so'->'lib/cctbx_dmtbx_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_math_ext.so.0.0.1' 'lib/cctbx_math_ext.so.0'->'lib/cctbx_math_ext.so.0.0.1' 'lib/cctbx_math_ext.so'->'lib/cctbx_math_ext.so.0.0.1' g++ -o lib/iotbx_pdb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_ext.so.0 iotbx/pdb/ext.o iotbx/pdb/hybrid_36_bpl.o iotbx/pdb/common_residue_names_bpl.o iotbx/pdb/rna_dna_atom_names_bpl.o iotbx/pdb/input_bpl.o iotbx/pdb/xray_structure_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/gltbx_viewer_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_viewer_utils_ext.so.0 gltbx/viewer_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' 'lib/cctbx_eltbx_tiny_pse_ext.so.0'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' 'lib/cctbx_eltbx_tiny_pse_ext.so'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' g++ -o lib/gltbx_gl_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_gl_ext.so.0 gltbx/gl_ext.o gltbx/gl_defines_00_bpl.o gltbx/gl_defines_01_bpl.o gltbx/gl_defines_02_bpl.o gltbx/gl_defines_03_bpl.o gltbx/gl_defines_04_bpl.o gltbx/gl_defines_05_bpl.o gltbx/gl_defines_06_bpl.o gltbx/gl_defines_07_bpl.o gltbx/gl_functions_00_bpl.o gltbx/gl_functions_01_bpl.o gltbx/gl_functions_02_bpl.o gltbx/gl_functions_03_bpl.o gltbx/gl_functions_04_bpl.o gltbx/gl_functions_05_bpl.o gltbx/gl_functions_06_bpl.o gltbx/gl_functions_07_bpl.o gltbx/gl_functions_08_bpl.o gltbx/gl_functions_09_bpl.o gltbx/gl_functions_10_bpl.o gltbx/gl_functions_11_bpl.o gltbx/gl_functions_12_bpl.o gltbx/gl_functions_13_bpl.o gltbx/gl_functions_14_bpl.o gltbx/gl_functions_15_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm Create symlinks for: 'lib/gltbx_glu_ext.so.0.0.1' 'lib/gltbx_glu_ext.so.0'->'lib/gltbx_glu_ext.so.0.0.1' 'lib/gltbx_glu_ext.so'->'lib/gltbx_glu_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/cctbx_xray_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_ext.so.0 cctbx/xray/boost_python/xray_ext.o cctbx/xray/boost_python/conversions.o cctbx/xray/boost_python/gradient_flags.o cctbx/xray/boost_python/gradients_direct.o cctbx/xray/boost_python/each_hkl_gradients_direct.o cctbx/xray/boost_python/fast_gradients.o cctbx/xray/boost_python/minimization.o cctbx/xray/boost_python/scatterer_flags.o cctbx/xray/boost_python/scatterer.o cctbx/xray/boost_python/scattering_type_registry.o cctbx/xray/boost_python/sampling_base.o cctbx/xray/boost_python/sampled_model_density.o cctbx/xray/boost_python/structure_factors_direct.o cctbx/xray/boost_python/structure_factors_simple.o cctbx/xray/boost_python/curvatures_simple.o cctbx/xray/boost_python/targets.o cctbx/xray/boost_python/f_model_bpl.o cctbx/xray/boost_python/twin_targets.o cctbx/xray/boost_python/grouped_data.o cctbx/xray/boost_python/parameter_map.o cctbx/xray/boost_python/twin_components.o cctbx/xray/boost_python/extinction.o cctbx/xray/boost_python/sigmaa.o cctbx/xray/targets/shelxl_wght_ls_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGLU.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGL.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGLU.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGL.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/gltbx_viewer_utils_ext.so.0.0.1' 'lib/gltbx_viewer_utils_ext.so.0'->'lib/gltbx_viewer_utils_ext.so.0.0.1' 'lib/gltbx_viewer_utils_ext.so'->'lib/gltbx_viewer_utils_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_chemical_elements_ext.so.0 cctbx/eltbx/boost_python/chemical_elements_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/iotbx_pdb_ext.so.0.0.1' 'lib/iotbx_pdb_ext.so.0'->'lib/iotbx_pdb_ext.so.0.0.1' 'lib/iotbx_pdb_ext.so'->'lib/iotbx_pdb_ext.so.0.0.1' g++ -o lib/dxtbx_flumpy.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_flumpy.so.0 dxtbx/src/dxtbx/boost_python/flumpy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5 /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6Create symlinks for: 'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' 'lib/cctbx_eltbx_chemical_elements_ext.so.0'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' 'lib/cctbx_eltbx_chemical_elements_ext.so'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' : warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/cctbx_symmetry_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_symmetry_search_ext.so.0 cctbx/symmetry_search/boost_python/symmetry_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/gltbx_gl_ext.so.0.0.1' 'lib/gltbx_gl_ext.so.0'->'lib/gltbx_gl_ext.so.0.0.1' 'lib/gltbx_gl_ext.so'->'lib/gltbx_gl_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_bcr_bcr_ext.so.0 cctbx/maptbx/bcr/bcr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_symmetry_search_ext.so.0.0.1' 'lib/cctbx_symmetry_search_ext.so.0'->'lib/cctbx_symmetry_search_ext.so.0.0.1' 'lib/cctbx_symmetry_search_ext.so'->'lib/cctbx_symmetry_search_ext.so.0.0.1' g++ -o lib/cctbx_geometry_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_ext.so.0 cctbx/geometry/boost_python/geometry_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/dxtbx_flumpy.so.0.0.1' 'lib/dxtbx_flumpy.so.0'->'lib/dxtbx_flumpy.so.0.0.1' 'lib/dxtbx_flumpy.so'->'lib/dxtbx_flumpy.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/cctbx_anharmonic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_anharmonic_ext.so.0 cctbx/adptbx/boost_python/anharmonic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' 'lib/cctbx_maptbx_bcr_bcr_ext.so.0'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' 'lib/cctbx_maptbx_bcr_bcr_ext.so'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' g++ -o lib/cctbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_array_family_flex_ext.so.0 cctbx/array_family/boost_python/flex_ext.o cctbx/array_family/boost_python/flex_hendrickson_lattman.o cctbx/array_family/boost_python/flex_miller_index.o cctbx/array_family/boost_python/flex_xray_scatterer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_anharmonic_ext.so.0.0.1' 'lib/cctbx_anharmonic_ext.so.0'->'lib/cctbx_anharmonic_ext.so.0.0.1' 'lib/cctbx_anharmonic_ext.so'->'lib/cctbx_anharmonic_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_icsd_radii_ext.so.0 cctbx/eltbx/boost_python/icsd_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_geometry_ext.so.0.0.1' 'lib/cctbx_geometry_ext.so.0'->'lib/cctbx_geometry_ext.so.0.0.1' 'lib/cctbx_geometry_ext.so'->'lib/cctbx_geometry_ext.so.0.0.1' g++ -o lib/gltbx_fonts_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_fonts_ext.so.0 gltbx/fonts_ext.o gltbx/font_ucs_8x13.o gltbx/font_ucs_9x15.o gltbx/font_ucs_10x20.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGLU.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGL.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_icsd_radii_ext.so.0'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_icsd_radii_ext.so'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' g++ -o lib/cctbx_uctbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_uctbx_ext.so.0 cctbx/uctbx/boost_python/uctbx_ext.o cctbx/uctbx/boost_python/fast_minimum_reduction.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/gltbx_fonts_ext.so.0.0.1' 'lib/gltbx_fonts_ext.so.0'->'lib/gltbx_fonts_ext.so.0.0.1' 'lib/gltbx_fonts_ext.so'->'lib/gltbx_fonts_ext.so.0.0.1' g++ -o lib/cctbx_emma_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_emma_ext.so.0 cctbx/boost_python/emma_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_emma_ext.so.0.0.1' 'lib/cctbx_emma_ext.so.0'->'lib/cctbx_emma_ext.so.0.0.1' 'lib/cctbx_emma_ext.so'->'lib/cctbx_emma_ext.so.0.0.1' g++ -o lib/iotbx_mtz_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_mtz_ext.so.0 iotbx/mtz/ext.o iotbx/mtz/object_bpl.o iotbx/mtz/crystal_bpl.o iotbx/mtz/dataset_bpl.o iotbx/mtz/column_bpl.o iotbx/mtz/batch_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_mtz -lcctbx -lccp4io -lccp4c -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_uctbx_ext.so.0.0.1' 'lib/cctbx_uctbx_ext.so.0'->'lib/cctbx_uctbx_ext.so.0.0.1' 'lib/cctbx_uctbx_ext.so'->'lib/cctbx_uctbx_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_xray_scattering_ext.so.0 cctbx/eltbx/boost_python/xray_scattering_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/cctbx_covariance_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_covariance_ext.so.0 cctbx/covariance/boost_python/covariance_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_sgtbx_ext.so.0.0.1' 'lib/cctbx_sgtbx_ext.so.0'->'lib/cctbx_sgtbx_ext.so.0.0.1' 'lib/cctbx_sgtbx_ext.so'->'lib/cctbx_sgtbx_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/cctbx_multipolar_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_multipolar_ext.so.0 cctbx/multipolar/aspherical_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_covariance_ext.so.0.0.1' 'lib/cctbx_covariance_ext.so.0'->'lib/cctbx_covariance_ext.so.0.0.1' 'lib/cctbx_covariance_ext.so'->'lib/cctbx_covariance_ext.so.0.0.1' g++ -o lib/cctbx_french_wilson_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_french_wilson_ext.so.0 cctbx/boost_python/french_wilson_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_array_family_flex_ext.so.0.0.1' 'lib/cctbx_array_family_flex_ext.so.0'->'lib/cctbx_array_family_flex_ext.so.0.0.1' 'lib/cctbx_array_family_flex_ext.so'->'lib/cctbx_array_family_flex_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_xray_ext.so.0.0.1' 'lib/cctbx_xray_ext.so.0'->'lib/cctbx_xray_ext.so.0.0.1' 'lib/cctbx_xray_ext.so'->'lib/cctbx_xray_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_multipolar_ext.so.0.0.1' 'lib/cctbx_multipolar_ext.so.0'->'lib/cctbx_multipolar_ext.so.0.0.1' 'lib/cctbx_multipolar_ext.so'->'lib/cctbx_multipolar_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' 'lib/cctbx_eltbx_xray_scattering_ext.so.0'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' 'lib/cctbx_eltbx_xray_scattering_ext.so'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_attenuation_coefficient_ext.so.0 cctbx/eltbx/boost_python/attenuation_coefficient_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/cctbx_french_wilson_ext.so.0.0.1' 'lib/cctbx_french_wilson_ext.so.0'->'lib/cctbx_french_wilson_ext.so.0.0.1' 'lib/cctbx_french_wilson_ext.so'->'lib/cctbx_french_wilson_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/iotbx_mtz_ext.so.0.0.1' 'lib/iotbx_mtz_ext.so.0'->'lib/iotbx_mtz_ext.so.0.0.1' 'lib/iotbx_mtz_ext.so'->'lib/iotbx_mtz_ext.so.0.0.1' g++ -o lib/cctbx_sgtbx_asu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_asu_ext.so.0 cctbx/sgtbx/direct_space_asu/proto/asu_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/dxtbx_imageset_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_imageset_ext.so.0 dxtbx/src/dxtbx/boost_python/imageset_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lhdf5 -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5 g++ -o lib/cctbx_asymmetric_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_asymmetric_map_ext.so.0 cctbx/maptbx/asymmetric_map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/cctbx_eltbx_sasaki_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_sasaki_ext.so.0 cctbx/eltbx/boost_python/sasaki_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/cctbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_masks_ext.so.0 cctbx/masks/boost_python/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/gltbx_util_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_util_ext.so.0 gltbx/util_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' 'lib/cctbx_eltbx_attenuation_coefficient_ext.so'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' g++ -o lib/gltbx_quadrics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_quadrics_ext.so.0 gltbx/quadrics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lGLU -lGL -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGLU.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGL.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' 'lib/cctbx_eltbx_sasaki_ext.so.0'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' 'lib/cctbx_eltbx_sasaki_ext.so'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' g++ -o lib/determine_unit_cell_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=determine_unit_cell_ext.so.0 cctbx/uctbx/determine_unit_cell/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGLU.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libGL.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_asymmetric_map_ext.so.0.0.1' 'lib/cctbx_asymmetric_map_ext.so.0'->'lib/cctbx_asymmetric_map_ext.so.0.0.1' 'lib/cctbx_asymmetric_map_ext.so'->'lib/cctbx_asymmetric_map_ext.so.0.0.1' g++ -o lib/cctbx_merging_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_merging_ext.so.0 cctbx/merging/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/determine_unit_cell_ext.so.0.0.1' 'lib/determine_unit_cell_ext.so.0'->'lib/determine_unit_cell_ext.so.0.0.1' 'lib/determine_unit_cell_ext.so'->'lib/determine_unit_cell_ext.so.0.0.1' g++ -o lib/dxtbx_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_model_ext.so.0 dxtbx/src/dxtbx/model/boost_python/beam.o dxtbx/src/dxtbx/model/boost_python/spectrum.o dxtbx/src/dxtbx/model/boost_python/goniometer.o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o dxtbx/src/dxtbx/model/boost_python/panel.o dxtbx/src/dxtbx/model/boost_python/detector.o dxtbx/src/dxtbx/model/boost_python/scan.o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o dxtbx/src/dxtbx/model/boost_python/crystal.o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o dxtbx/src/dxtbx/model/boost_python/experiment.o dxtbx/src/dxtbx/model/boost_python/experiment_list.o dxtbx/src/dxtbx/model/boost_python/model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/base/lib -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python313 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python313 -lcbf -lhdf5 Create symlinks for: 'lib/cctbx_sgtbx_asu_ext.so.0.0.1' 'lib/cctbx_sgtbx_asu_ext.so.0'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1' 'lib/cctbx_sgtbx_asu_ext.so'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/cctbx_masks_ext.so.0.0.1' 'lib/cctbx_masks_ext.so.0'->'lib/cctbx_masks_ext.so.0.0.1' 'lib/cctbx_masks_ext.so'->'lib/cctbx_masks_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_python313.soCreate symlinks for: 'lib/gltbx_quadrics_ext.so.0.0.1' 'lib/gltbx_quadrics_ext.so.0'->'lib/gltbx_quadrics_ext.so.0.0.1' 'lib/gltbx_quadrics_ext.so'->'lib/gltbx_quadrics_ext.so.0.0.1' : warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/cctbx_miller_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_miller_ext.so.0 cctbx/miller/boost_python/miller_ext.o cctbx/miller/boost_python/asu.o cctbx/miller/boost_python/bins.o cctbx/miller/boost_python/change_basis.o cctbx/miller/boost_python/expand_to_p1.o cctbx/miller/boost_python/index_generator.o cctbx/miller/boost_python/index_span.o cctbx/miller/boost_python/match_bijvoet_mates.o cctbx/miller/boost_python/match_indices.o cctbx/miller/boost_python/match_multi_indices.o cctbx/miller/boost_python/merge_equivalents.o cctbx/miller/boost_python/phase_integrator.o cctbx/miller/boost_python/phase_transfer.o cctbx/miller/boost_python/sym_equiv.o cctbx/miller/boost_python/f_calc_map.o cctbx/miller/boost_python/lookup_utils.o cctbx/miller/boost_python/amplitude_normalisation.o cctbx/miller/boost_python/randomize_amplitude_and_phase.o cctbx/miller/boost_python/slices.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o spotfinder/core_toolbox/spotfilter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/spotfilter.cpp Create symlinks for: 'lib/cctbx_merging_ext.so.0.0.1' 'lib/cctbx_merging_ext.so.0'->'lib/cctbx_merging_ext.so.0.0.1' 'lib/cctbx_merging_ext.so'->'lib/cctbx_merging_ext.so.0.0.1' Create symlinks for: 'lib/gltbx_util_ext.so.0.0.1' 'lib/gltbx_util_ext.so.0'->'lib/gltbx_util_ext.so.0.0.1' 'lib/gltbx_util_ext.so'->'lib/gltbx_util_ext.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/masks/atom_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/masks/atom_mask.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/tls/decompose.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/decompose.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o rstbx/dps_core/dps_core.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/dps_core/dps_core.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/dxtbx_imageset_ext.so.0.0.1' 'lib/dxtbx_imageset_ext.so.0'->'lib/dxtbx_imageset_ext.so.0.0.1' 'lib/dxtbx_imageset_ext.so'->'lib/dxtbx_imageset_ext.so.0.0.1' g++ -o rstbx/dps_core/directional_fft.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/dps_core/directional_fft.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_miller_ext.so.0.0.1' 'lib/cctbx_miller_ext.so.0'->'lib/cctbx_miller_ext.so.0.0.1' 'lib/cctbx_miller_ext.so'->'lib/cctbx_miller_ext.so.0.0.1' g++ -o rstbx/dps_core/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/dps_core/direction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/dxtbx_model_ext.so.0.0.1' 'lib/dxtbx_model_ext.so.0'->'lib/dxtbx_model_ext.so.0.0.1' 'lib/dxtbx_model_ext.so'->'lib/dxtbx_model_ext.so.0.0.1' g++ -o rstbx/indexing_api/indexing_api.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/indexing_api.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libspotfinder.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libspotfinder.so.0 spotfinder/core_toolbox/spot.o spotfinder/core_toolbox/libdistl.o spotfinder/core_toolbox/hough.o spotfinder/core_toolbox/distl.o spotfinder/core_toolbox/spotfilter.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lann-cctbx -lomptbx -lm /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libspotfinder.so.0.0.1' 'lib/libspotfinder.so.0'->'lib/libspotfinder.so.0.0.1' 'lib/libspotfinder.so'->'lib/libspotfinder.so.0.0.1' g++ -o lib/libdxtbxspotfinder.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libdxtbxspotfinder.so.0 spotfinder/dxtbx_toolbox/libdistl.o spotfinder/dxtbx_toolbox/distl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lspotfinder -lann-cctbx -lomptbx -lm g++ -o rstbx/diffraction/ewald_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/ewald_sphere.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/diffraction/partial_spot_position_partial_H.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/partial_spot_position_partial_H.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/iotbx_pdb_hierarchy_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_hierarchy_ext.so.0 iotbx/pdb/hierarchy_ext.o iotbx/pdb/hierarchy_atom_bpl.o iotbx/pdb/hierarchy_atoms_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/libdxtbxspotfinder.so.0.0.1' 'lib/libdxtbxspotfinder.so.0'->'lib/libdxtbxspotfinder.so.0.0.1' 'lib/libdxtbxspotfinder.so'->'lib/libdxtbxspotfinder.so.0.0.1' g++ -o scitbx/minpack/raw.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/raw.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ gcc -o scitbx/slatec/lib_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/slatec/lib_c.c /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/libscitbx_slatec.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_slatec.so.0 scitbx/slatec/lib_c.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lm /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libscitbx_slatec.so.0.0.1' 'lib/libscitbx_slatec.so.0'->'lib/libscitbx_slatec.so.0.0.1' 'lib/libscitbx_slatec.so'->'lib/libscitbx_slatec.so.0.0.1' g++ -o lib/libmmtbx_tls.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libmmtbx_tls.so.0 mmtbx/tls/decompose.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lm /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o smtbx/refinement/constraints/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/affine.cpp Create symlinks for: 'lib/libmmtbx_tls.so.0.0.1' 'lib/libmmtbx_tls.so.0'->'lib/libmmtbx_tls.so.0.0.1' 'lib/libmmtbx_tls.so'->'lib/libmmtbx_tls.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/geometrical_hydrogens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' 'lib/iotbx_pdb_hierarchy_ext.so.0'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' 'lib/iotbx_pdb_hierarchy_ext.so'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/occupancy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/occupancy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libscitbx_minpack.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_minpack.so.0 scitbx/minpack/raw.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lm /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libscitbx_minpack.so.0.0.1' 'lib/libscitbx_minpack.so.0'->'lib/libscitbx_minpack.so.0.0.1' 'lib/libscitbx_minpack.so'->'lib/libscitbx_minpack.so.0.0.1' g++ -o smtbx/refinement/constraints/reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/rigid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/rigid.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/same_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/librstbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=librstbx.so.0 rstbx/dps_core/dps_core.o rstbx/dps_core/directional_fft.o rstbx/dps_core/direction.o rstbx/indexing_api/indexing_api.o rstbx/diffraction/ewald_sphere.o rstbx/diffraction/partial_spot_position_partial_H.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lcctbx -lm /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/librstbx.so.0.0.1' 'lib/librstbx.so.0'->'lib/librstbx.so.0.0.1' 'lib/librstbx.so'->'lib/librstbx.so.0.0.1' g++ -o smtbx/refinement/constraints/scaled_adp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/scaled_adp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/shared.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/shared.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/symmetry_equivalent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/symmetry_equivalent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/u_eq_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/u_eq_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/u_iso_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/alignment/alignment_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/alignment/alignment_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/building/loop_closure/ccd_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/building/loop_closure/ccd_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/bulk_solvent/bulk_solvent_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/bulk_solvent/bulk_solvent_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/bulk_solvent/bulk_solvent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/bulk_solvent/bulk_solvent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/den/boost_python/den_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/den/boost_python/den_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/secondary_structure/dssp_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/secondary_structure/dssp_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libsmtbx_refinement_constraints.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libsmtbx_refinement_constraints.so.0 smtbx/refinement/constraints/affine.o smtbx/refinement/constraints/geometrical_hydrogens.o smtbx/refinement/constraints/occupancy.o smtbx/refinement/constraints/reparametrisation.o smtbx/refinement/constraints/rigid.o smtbx/refinement/constraints/same_group.o smtbx/refinement/constraints/scaled_adp.o smtbx/refinement/constraints/shared.o smtbx/refinement/constraints/special_position.o smtbx/refinement/constraints/symmetry_equivalent.o smtbx/refinement/constraints/u_eq_dependent_u_iso.o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/hdf5/serial/libhdf5.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/libsmtbx_refinement_constraints.so.0.0.1' 'lib/libsmtbx_refinement_constraints.so.0'->'lib/libsmtbx_refinement_constraints.so.0.0.1' 'lib/libsmtbx_refinement_constraints.so'->'lib/libsmtbx_refinement_constraints.so.0.0.1' g++ -o mmtbx/dynamics/dynamics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/dynamics/dynamics_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/dynamics/dynamics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/dynamics/dynamics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/den/den.h:2, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/den/boost_python/den_ext.cpp:12: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o mmtbx/f_model/f_model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/f_model/f_model_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::den::den_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/den/boost_python/den_ext.cpp:53:78: required from here 53 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 54 | "shared_den_simple_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/libmmtbx_masks.so.0.0.1' 'lib/libmmtbx_masks.so.0'->'lib/libmmtbx_masks.so.0.0.1' 'lib/libmmtbx_masks.so'->'lib/libmmtbx_masks.so.0.0.1' g++ -o mmtbx/geometry/boost_python/asa_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/asa_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_alignment_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_alignment_ext.so.0 mmtbx/alignment/alignment_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_alignment_ext.so.0.0.1' 'lib/mmtbx_alignment_ext.so.0'->'lib/mmtbx_alignment_ext.so.0.0.1' 'lib/mmtbx_alignment_ext.so'->'lib/mmtbx_alignment_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/clash_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/clash_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_dssp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dssp_ext.so.0 mmtbx/secondary_structure/dssp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_dssp_ext.so.0.0.1' 'lib/mmtbx_dssp_ext.so.0'->'lib/mmtbx_dssp_ext.so.0.0.1' 'lib/mmtbx_dssp_ext.so'->'lib/mmtbx_dssp_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/indexing_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/indexing_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_dynamics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dynamics_ext.so.0 mmtbx/dynamics/dynamics_ext.o mmtbx/dynamics/dynamics.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_dynamics_ext.so.0.0.1' 'lib/mmtbx_dynamics_ext.so.0'->'lib/mmtbx_dynamics_ext.so.0.0.1' 'lib/mmtbx_dynamics_ext.so'->'lib/mmtbx_dynamics_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/primitive_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/primitive_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_building_loop_closure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_building_loop_closure_ext.so.0 mmtbx/building/loop_closure/ccd_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -liotbx_pdb -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_building_loop_closure_ext.so.0.0.1' 'lib/mmtbx_building_loop_closure_ext.so.0'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1' 'lib/mmtbx_building_loop_closure_ext.so'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/shared_types_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/shared_types_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/asa_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/clash_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/object_manager.hpp:8, from /usr/include/boost/python/extract.hpp:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/indexing_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_den_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_den_restraints_ext.so.0 mmtbx/den/boost_python/den_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/shared_types_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_den_restraints_ext.so.0.0.1' 'lib/mmtbx_den_restraints_ext.so.0'->'lib/mmtbx_den_restraints_ext.so.0.0.1' 'lib/mmtbx_den_restraints_ext.so'->'lib/mmtbx_den_restraints_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry/boost_python/sphere_surface_sampling_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_primitive_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_primitive_ext.so.0 mmtbx/geometry/boost_python/primitive_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_geometry_primitive_ext.so.0.0.1' 'lib/mmtbx_geometry_primitive_ext.so.0'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1' 'lib/mmtbx_geometry_primitive_ext.so'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1' g++ -o mmtbx/hydrogens/hydrogens_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/hydrogens/hydrogens_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_shared_types_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_shared_types_ext.so.0 mmtbx/geometry/boost_python/shared_types_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' 'lib/mmtbx_geometry_shared_types_ext.so.0'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' 'lib/mmtbx_geometry_shared_types_ext.so'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' g++ -o mmtbx/masks/masks_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/masks/masks_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_f_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_f_model_ext.so.0 mmtbx/f_model/f_model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_f_model_ext.so.0.0.1' 'lib/mmtbx_f_model_ext.so.0'->'lib/mmtbx_f_model_ext.so.0.0.1' 'lib/mmtbx_f_model_ext.so'->'lib/mmtbx_f_model_ext.so.0.0.1' g++ -o mmtbx/max_lik/max_lik_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/max_lik/max_lik_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_sphere_surface_sampling_ext.so.0 mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' g++ -o mmtbx/max_lik/max_lik.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/max_lik/max_lik.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_bulk_solvent_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_bulk_solvent_ext.so.0 mmtbx/bulk_solvent/bulk_solvent_ext.o mmtbx/bulk_solvent/bulk_solvent.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/mmtbx_hydrogens_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_hydrogens_ext.so.0 mmtbx/hydrogens/hydrogens_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_bulk_solvent_ext.so.0.0.1' 'lib/mmtbx_bulk_solvent_ext.so.0'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1' 'lib/mmtbx_bulk_solvent_ext.so'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1' /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o mmtbx/bulk_solvent/mosaic_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/bulk_solvent/mosaic_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_hydrogens_ext.so.0.0.1' 'lib/mmtbx_hydrogens_ext.so.0'->'lib/mmtbx_hydrogens_ext.so.0.0.1' 'lib/mmtbx_hydrogens_ext.so'->'lib/mmtbx_hydrogens_ext.so.0.0.1' g++ -o mmtbx/ncs/cartesian_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/ncs/cartesian_restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_clash_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_clash_ext.so.0 mmtbx/geometry/boost_python/clash_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/mmtbx_geometry_indexing_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_indexing_ext.so.0 mmtbx/geometry/boost_python/indexing_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/mmtbx_geometry_clash_ext.so.0.0.1' 'lib/mmtbx_geometry_clash_ext.so.0'->'lib/mmtbx_geometry_clash_ext.so.0.0.1' 'lib/mmtbx_geometry_clash_ext.so'->'lib/mmtbx_geometry_clash_ext.so.0.0.1' g++ -o mmtbx/ncs/tncs_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/ncs/tncs_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_geometry_indexing_ext.so.0.0.1' 'lib/mmtbx_geometry_indexing_ext.so.0'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1' 'lib/mmtbx_geometry_indexing_ext.so'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1' g++ -o mmtbx/pair_interaction/interaction_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/pair_interaction/interaction_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/probe/boost_python/probe_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/probe/boost_python/probe_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_masks_ext.so.0 mmtbx/masks/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_masks -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_masks_ext.so.0.0.1' 'lib/mmtbx_masks_ext.so.0'->'lib/mmtbx_masks_ext.so.0.0.1' 'lib/mmtbx_masks_ext.so'->'lib/mmtbx_masks_ext.so.0.0.1' g++ -o mmtbx/probe/Scoring.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/probe/Scoring.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_max_lik_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_max_lik_ext.so.0 mmtbx/max_lik/max_lik_ext.o mmtbx/max_lik/max_lik.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_max_lik_ext.so.0.0.1' 'lib/mmtbx_max_lik_ext.so.0'->'lib/mmtbx_max_lik_ext.so.0.0.1' 'lib/mmtbx_max_lik_ext.so'->'lib/mmtbx_max_lik_ext.so.0.0.1' g++ -o mmtbx/probe/DotSpheres.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/probe/DotSpheres.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_mosaic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_mosaic_ext.so.0 mmtbx/bulk_solvent/mosaic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_mosaic_ext.so.0.0.1' 'lib/mmtbx_mosaic_ext.so.0'->'lib/mmtbx_mosaic_ext.so.0.0.1' 'lib/mmtbx_mosaic_ext.so'->'lib/mmtbx_mosaic_ext.so.0.0.1' g++ -o mmtbx/probe/SpatialQuery.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/probe/SpatialQuery.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_cartesian_restraints_ext.so.0 mmtbx/ncs/cartesian_restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' 'lib/mmtbx_ncs_cartesian_restraints_ext.so'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' g++ -o mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/reduce/boost_python/reduce_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/reduce/boost_python/reduce_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/ramachandran.h:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i mmtbx::geometry_restraints::target_phi_psi(const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const phi_psi_proxy&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/ramachandran.h:314:35: required from here 314 | r = target_phi_psi(general_table, sites_cart, proxy);} | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/ramachandran.h:269:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 269 | for(int i=0; i, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 284 | for(int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/format/parsing.hpp:21, from /usr/include/boost/format.hpp:50, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/dihedral.h:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::phi_psi_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:52:75: required from here 52 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 53 | "shared_phi_psi_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/mmtbx_ncs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_ext.so.0 mmtbx/ncs/tncs_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_ncs_ext.so.0.0.1' 'lib/mmtbx_ncs_ext.so.0'->'lib/mmtbx_ncs_ext.so.0.0.1' 'lib/mmtbx_ncs_ext.so'->'lib/mmtbx_ncs_ext.so.0.0.1' g++ -o mmtbx/reduce/InteractionGraph.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/reduce/InteractionGraph.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ar rc probe/lib/libprobelib.a mmtbx/probe/Scoring.o mmtbx/probe/DotSpheres.o mmtbx/probe/SpatialQuery.o ranlib probe/lib/libprobelib.a g++ -o mmtbx/reduce/Optimizers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/reduce/Optimizers.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_asa_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_asa_ext.so.0 mmtbx/geometry/boost_python/asa_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_geometry_asa_ext.so.0.0.1' 'lib/mmtbx_geometry_asa_ext.so.0'->'lib/mmtbx_geometry_asa_ext.so.0.0.1' 'lib/mmtbx_geometry_asa_ext.so'->'lib/mmtbx_geometry_asa_ext.so.0.0.1' g++ -o mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_pair_interaction_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_pair_interaction_ext.so.0 mmtbx/pair_interaction/interaction_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_pair_interaction_ext.so.0.0.1' 'lib/mmtbx_pair_interaction_ext.so.0'->'lib/mmtbx_pair_interaction_ext.so.0.0.1' 'lib/mmtbx_pair_interaction_ext.so'->'lib/mmtbx_pair_interaction_ext.so.0.0.1' g++ -o mmtbx/rotamer/fit_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/rotamer/fit_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/rsr/rsr_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/rsr/rsr_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/reference_coordinate.h:2, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:13: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with ProxyType = mmtbx::geometry_restraints::reference_coordinate_proxy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:80:41: required from here 80 | cctbx::geometry_restraints::shared_proxy_remove, ( | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | if (match_ctr != i_seqs.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::reference_coordinate_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:61:25: required from here 61 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 62 | "shared_reference_coordinate_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o mmtbx/scaling/scaling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/scaling/scaling_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_probe_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_probe_ext.so.0 mmtbx/probe/boost_python/probe_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Lprobe/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/probe/lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_probe_ext.so.0.0.1' 'lib/mmtbx_probe_ext.so.0'->'lib/mmtbx_probe_ext.so.0.0.1' 'lib/mmtbx_probe_ext.so'->'lib/mmtbx_probe_ext.so.0.0.1' g++ -o mmtbx/scaling/twinning_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/scaling/twinning_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_ramachandran_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ramachandran_restraints_ext.so.0 mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' 'lib/mmtbx_ramachandran_restraints_ext.so.0'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' 'lib/mmtbx_ramachandran_restraints_ext.so'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' g++ -o mmtbx/scaling/relative_scaling_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/scaling/relative_scaling_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_rsr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rsr_ext.so.0 mmtbx/rsr/rsr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_rsr_ext.so.0.0.1' 'lib/mmtbx_rsr_ext.so.0'->'lib/mmtbx_rsr_ext.so.0.0.1' 'lib/mmtbx_rsr_ext.so'->'lib/mmtbx_rsr_ext.so.0.0.1' g++ -o mmtbx/scaling/outlier_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/scaling/outlier_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_reference_coordinate_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reference_coordinate_ext.so.0 mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_reference_coordinate_ext.so.0.0.1' 'lib/mmtbx_reference_coordinate_ext.so.0'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1' 'lib/mmtbx_reference_coordinate_ext.so'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1' g++ -o mmtbx/secondary_structure/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/secondary_structure/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_rotamer_fit_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rotamer_fit_ext.so.0 mmtbx/rotamer/fit_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_rotamer_fit_ext.so.0.0.1' 'lib/mmtbx_rotamer_fit_ext.so.0'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1' 'lib/mmtbx_rotamer_fit_ext.so'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1' g++ -o mmtbx/tls/decompose_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/decompose_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ ar rc reduce/lib/libreduce2lib.a mmtbx/reduce/PositionReturn.o mmtbx/reduce/InteractionGraph.o mmtbx/reduce/Optimizers.o ranlib reduce/lib/libreduce2lib.a g++ -o mmtbx/tls/tls_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/tls_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_secondary_structure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_secondary_structure_ext.so.0 mmtbx/secondary_structure/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_secondary_structure_ext.so.0.0.1' 'lib/mmtbx_secondary_structure_ext.so.0'->'lib/mmtbx_secondary_structure_ext.so.0.0.1' 'lib/mmtbx_secondary_structure_ext.so'->'lib/mmtbx_secondary_structure_ext.so.0.0.1' g++ -o mmtbx/tls/optimise_amplitudes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/optimise_amplitudes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/tls/optimise_amplitudes_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/optimise_amplitudes_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_tls_decompose_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_decompose_ext.so.0 mmtbx/tls/decompose_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_tls_decompose_ext.so.0.0.1' 'lib/mmtbx_tls_decompose_ext.so.0'->'lib/mmtbx_tls_decompose_ext.so.0.0.1' 'lib/mmtbx_tls_decompose_ext.so'->'lib/mmtbx_tls_decompose_ext.so.0.0.1' g++ -o mmtbx/tls/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/tls/utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/tls/utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/utils/utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/utils/utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_optimise_amplitudes_ext.so.0 mmtbx/tls/optimise_amplitudes.o mmtbx/tls/optimise_amplitudes_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' 'lib/mmtbx_tls_optimise_amplitudes_ext.so'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' g++ -o mmtbx/validation/ramachandran/rama_eval_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/validation/ramachandran/rama_eval_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o omptbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/omptbx/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_scaling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_scaling_ext.so.0 mmtbx/scaling/scaling_ext.o mmtbx/scaling/twinning_bpl.o mmtbx/scaling/relative_scaling_bpl.o mmtbx/scaling/outlier_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/mmtbx_reduce_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reduce_ext.so.0 mmtbx/reduce/boost_python/reduce_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Lreduce/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/reduce/lib -Lprobe/lib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/probe/lib -lreduce2lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_scaling_ext.so.0.0.1' 'lib/mmtbx_scaling_ext.so.0'->'lib/mmtbx_scaling_ext.so.0.0.1' 'lib/mmtbx_scaling_ext.so'->'lib/mmtbx_scaling_ext.so.0.0.1' g++ -o rstbx/array_family/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/array_family/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_reduce_ext.so.0.0.1' 'lib/mmtbx_reduce_ext.so.0'->'lib/mmtbx_reduce_ext.so.0.0.1' 'lib/mmtbx_reduce_ext.so'->'lib/mmtbx_reduce_ext.so.0.0.1' g++ -o rstbx/array_family/flex_rstbx_arrays.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/array_family/flex_rstbx_arrays.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/bandpass/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/bandpass/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/src -Irstbx/bandpass/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/bpcx/detector_model/detector_model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/bpcx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/src -Irstbx/bpcx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/detector_model/detector_model_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_utils_ext.so.0 mmtbx/utils/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_utils_ext.so.0.0.1' 'lib/mmtbx_utils_ext.so.0'->'lib/mmtbx_utils_ext.so.0.0.1' 'lib/mmtbx_utils_ext.so'->'lib/mmtbx_utils_ext.so.0.0.1' g++ -o rstbx/bpcx/detector_model/sensor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/bpcx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/src -Irstbx/bpcx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/detector_model/sensor.cpp g++ -o lib/omptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=omptbx_ext.so.0 omptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lomptbx -lboost_thread -lboost_system -lboost_python313 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/omptbx_ext.so.0.0.1' 'lib/omptbx_ext.so.0'->'lib/omptbx_ext.so.0.0.1' 'lib/omptbx_ext.so'->'lib/omptbx_ext.so.0.0.1' g++ -o rstbx/diffraction/fastbragg/fastbragg_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec2.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/detector_model/sensor.h:3, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bpcx/detector_model/sensor.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_validation_ramachandran_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_validation_ramachandran_ext.so.0 mmtbx/validation/ramachandran/rama_eval_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o rstbx/diffraction/fastbragg/fastbragg.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' 'lib/mmtbx_validation_ramachandran_ext.so.0'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' 'lib/mmtbx_validation_ramachandran_ext.so'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' g++ -o rstbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h: In constructor ‘rstbx::bandpass::active_area_filter::active_area_filter(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h:100:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i < tiles.size()/4; ++i){ | ~~^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h: In member function ‘bool rstbx::bandpass::active_area_filter::operator()(rstbx::bandpass::vec3, const int&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h:126:39: warning: comparison of integer expressions of different signedness: ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 126 | SCITBX_ASSERT( adapt.nn.size()== NEAR); | ~~~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/parameters.h:126:9: note: in expansion of macro ‘SCITBX_ASSERT’ 126 | SCITBX_ASSERT( adapt.nn.size()== NEAR); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/subpixel_joint_model.h: In member function ‘void rstbx::bandpass::subpixel_joint_model::set_subpixel(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/subpixel_joint_model.h:26:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 26 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/subpixel_joint_model.h:31:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 31 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::prescreen_indices(const double&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:46:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared rstbx::bandpass::use_case_bp3::selected_partialities() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:93:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::picture_fast_slow()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:152:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 152 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::picture_fast_slow_force()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:296:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 296 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:462:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 462 | for ( int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::spot_rectangles(rstbx::bandpass::vec3ref)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:477:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 477 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::spot_rectregions(rstbx::bandpass::vec3ref, const double&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:511:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 511 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::enclosed_pixels() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:543:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 543 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_hi_predictions() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:752:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 752 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_lo_predictions() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:763:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 763 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_predictions() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:774:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 774 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_predictions_labelit_format() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:787:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 787 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_hkls() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:802:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 802 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::restricted_to_active_areas(scitbx::af::shared, scitbx::af::shared >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:815:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 815 | for (int idx = 0; idx < active_areas.size(); idx+=4){ | ~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::set_subpixel(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:828:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 828 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ //DEPRECATED | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In function ‘scitbx::af::shared > rstbx::bandpass::ext::use_case_bp2_picture_fast_slow(scitbx::af::shared >, const cctbx::crystal_orientation&, const scitbx::vec3&, const double&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const double&, const scitbx::vec3&, const double&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:933:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 933 | for (int idx = 0; idx < indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa > rstbx::diffraction::fastbragg::detector::intdata()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int count = 0; count < raw.size(); ++count){ | ~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In instantiation of ‘void rstbx::bandpass::use_case_bp3::enclosed_pixels_and_margin_pixels_detail() [with pixel_accept_policy = resolution_limited_pixel_accept_policy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:616:87: required from here 616 | enclosed_pixels_and_margin_pixels_detail(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:631:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::shared rstbx::diffraction::fastbragg::camera::get_wavelengths() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 133 | SCITBX_ASSERT(result.size()==dispsteps); | ~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:5: note: in expansion of macro ‘SCITBX_ASSERT’ 133 | SCITBX_ASSERT(result.size()==dispsteps); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp: In instantiation of ‘void rstbx::bandpass::use_case_bp3::enclosed_pixels_and_margin_pixels_detail() [with pixel_accept_policy = unlimited_pixel_accept_policy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:620:78: required from here 620 | enclosed_pixels_and_margin_pixels_detail(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:631:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘std::map, double> rstbx::diffraction::fastbragg::crystal::get_amplitude_mapping() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:176:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 176 | for (int i = 0; i < miller.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘void rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector(const bool&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 305 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ g++ -o rstbx/indexing_api/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/indexing_api/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/src -Irstbx/indexing_api/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa > rstbx::diffraction::fastbragg::detector::intdata()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int count = 0; count < raw.size(); ++count){ | ~~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::shared rstbx::diffraction::fastbragg::camera::get_wavelengths() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 133 | SCITBX_ASSERT(result.size()==dispsteps); | ~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:5: note: in expansion of macro ‘SCITBX_ASSERT’ 133 | SCITBX_ASSERT(result.size()==dispsteps); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘std::map, double> rstbx::diffraction::fastbragg::crystal::get_amplitude_mapping() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:176:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 176 | for (int i = 0; i < miller.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘void rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector(const bool&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 305 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In instantiation of ‘scitbx::af::shared rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector_get_indices(const bool&) [with IndexType = scitbx::vec3; MillerConversionPolicy = rstbx::diffraction::fastbragg::vec3_double_miller_index_policy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:134:11: required from here 127 | class_("fast_bragg_simulation",init<>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | | 129 | .def("set_detector",&fast_bragg_simulation::set_detector) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("set_camera",&fast_bragg_simulation::set_camera) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("set_crystal",&fast_bragg_simulation::set_crystal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("sweep_over_detector",&fast_bragg_simulation::sweep_over_detector, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def("sweep_over_detector_float_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 | rstbx::diffraction::fastbragg::vec3, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 | rstbx::diffraction::fastbragg::vec3_double_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:456:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 456 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In instantiation of ‘scitbx::af::shared rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector_get_indices(const bool&) [with IndexType = cctbx::miller::index<>; MillerConversionPolicy = rstbx::diffraction::fastbragg::integer_miller_index_policy]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:138:11: required from here 127 | class_("fast_bragg_simulation",init<>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | | 129 | .def("set_detector",&fast_bragg_simulation::set_detector) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("set_camera",&fast_bragg_simulation::set_camera) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("set_crystal",&fast_bragg_simulation::set_crystal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("sweep_over_detector",&fast_bragg_simulation::sweep_over_detector, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def("sweep_over_detector_float_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 | rstbx::diffraction::fastbragg::vec3, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 | rstbx::diffraction::fastbragg::vec3_double_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 138 | .def("sweep_over_detector_integer_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | rstbx::diffraction::fastbragg::miller_t, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 | rstbx::diffraction::fastbragg::integer_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/diffraction/fastbragg/fastbragg.h:456:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 456 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ g++ -o lib/rstbx_bpcx_detector_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bpcx_detector_model_ext.so.0 rstbx/bpcx/detector_model/detector_model_ext.o rstbx/bpcx/detector_model/sensor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' 'lib/rstbx_bpcx_detector_model_ext.so.0'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' 'lib/rstbx_bpcx_detector_model_ext.so'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' g++ -o rstbx/apps/integration_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/apps/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/src -Irstbx/apps/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/integration_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/real_to_complex.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/dps_core/directional_fft.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/dps_core/dps_core.h:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/indexing_api.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/virtual_panel.h:28, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel_data.h:17, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/indexing_api.h:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:435:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 435 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src/dxtbx/model/panel.h:436:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 436 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp: In member function ‘void indexing_api::rayleigh_cpp::estimate_parameters_from_cdf(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:59:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 59 | for (int i=0; i < x_data.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::pdf(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:80:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 80 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::cdf(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:96:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 96 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::d_cdf_d_sigma(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::gradients(scitbx::af::shared, const int&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:129:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 129 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/indexing_api/ext.cpp:135:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 135 | for (int i = 0; i < gradients.size(); ++i){ | ~~^~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_tls_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_ext.so.0 mmtbx/tls/tls_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_tls_ext.so.0.0.1' 'lib/mmtbx_tls_ext.so.0'->'lib/mmtbx_tls_ext.so.0.0.1' 'lib/mmtbx_tls_ext.so'->'lib/mmtbx_tls_ext.so.0.0.1' /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/scope.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/bandpass/ext.cpp:4: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o rstbx/simage/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/simage/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/src -Irstbx/simage/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/libdistl.h:81, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/distl.h:14, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/integration_ext.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/scanbox.h: In member function ‘Distl::interval_list Distl::scanbox_tiling_explicit::generate_defined_x_tiles(const int&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/iotbx/detectors/scanbox.h:268:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 268 | for (int tile = 0 ; tile < tile_count; ++tile){ | ~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::append_ISmask(scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:222:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 222 | for (int i=0; i < mask.size(); i+=2){ | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::positional_correction_mapping(scitbx::af::shared >, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:273:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 273 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 287 | for (int p=0; p >, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:310:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 310 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 320 | for (int p=0; p > rstbx::integration::simple_integration::safe_background(const scitbx::af::flex_int&, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:366:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 366 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 378 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 395 | for (int i=0; i >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 495 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 550 | for (int i=0; i >, scitbx::af::shared >, scitbx::af::shared >)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/apps/stills/simple_integration.h:575:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 575 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int k=0; k::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 638 | for (int k=0; k >&, const scitbx::af::const_ref&, const scitbx::mat3&, double, double, int, double, scitbx::vec2, scitbx::vec2, unsigned int, double)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/image_simple.hpp:144:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 144 | for(int i=0;i<=point_spread;i++) { | ~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/image_simple.hpp:148:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 148 | for(int j=0;j<=point_spread;j++) { | ~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/image_simple.hpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/ext.cpp: In function ‘std::string rstbx::simage::ext::combine_rgb_images(const boost::python::list&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simage/ext.cpp:58:42: warning: comparison of integer expressions of different signedness: ‘boost::python::ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 58 | TBXX_ASSERT(bp::len(rgb_images[j]) == img_size); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’ 59 | if (!(condition)) { \ | ^~~~~~~~~ g++ -o lib/rstbx_diffraction_fastbragg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_diffraction_fastbragg_ext.so.0 rstbx/diffraction/fastbragg/fastbragg_ext.o rstbx/diffraction/fastbragg/fastbragg.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' 'lib/rstbx_diffraction_fastbragg_ext.so.0'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' 'lib/rstbx_diffraction_fastbragg_ext.so'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' g++ -o rstbx/simulation/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/simulation/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/src -Irstbx/simulation/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_bandpass_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bandpass_ext.so.0 rstbx/bandpass/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lann-cctbx -lann_adaptor -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o lib/rstbx_indexing_api_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_indexing_api_ext.so.0 rstbx/indexing_api/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/rstbx_bandpass_ext.so.0.0.1' 'lib/rstbx_bandpass_ext.so.0'->'lib/rstbx_bandpass_ext.so.0.0.1' 'lib/rstbx_bandpass_ext.so'->'lib/rstbx_bandpass_ext.so.0.0.1' Create symlinks for: 'lib/rstbx_indexing_api_ext.so.0.0.1' 'lib/rstbx_indexing_api_ext.so.0'->'lib/rstbx_indexing_api_ext.so.0.0.1' 'lib/rstbx_indexing_api_ext.so'->'lib/rstbx_indexing_api_ext.so.0.0.1' g++ -o rstbx/symmetry/constraints/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -Irstbx/symmetry/constraints/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/symmetry/constraints/src -Irstbx/symmetry/constraints/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/symmetry/constraints/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/symmetry/constraints/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_tls_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_utils_ext.so.0 mmtbx/tls/utils.o mmtbx/tls/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/mmtbx_tls_utils_ext.so.0.0.1' 'lib/mmtbx_tls_utils_ext.so.0'->'lib/mmtbx_tls_utils_ext.so.0.0.1' 'lib/mmtbx_tls_utils_ext.so'->'lib/mmtbx_tls_utils_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_grid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_grid.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_simage_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simage_ext.so.0 rstbx/simage/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/rstbx_simage_ext.so.0.0.1' 'lib/rstbx_simage_ext.so.0'->'lib/rstbx_simage_ext.so.0.0.1' 'lib/rstbx_simage_ext.so'->'lib/rstbx_simage_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_bool.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/ext.cpp:11: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::shared rstbx::xfel1::select_proximal_indices(const int&, const double&, const double&, const cctbx::crystal_orientation&, const double&, const double&, const double&, const double&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int x = 0; x < indices_all.size(); ++x){ | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::versa > rstbx::xfel1::raw_diffraction(scitbx::af::shared, scitbx::af::versa >, const size_t&, const double&, const double&, const double&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h:178:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 178 | for (int mcount=0; mcount::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 230 | for (int isel = 0; isel < selected.size(); ++isel){ | ~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h:231:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 231 | for (int imos = 0; imos < mosaic_perturbations.size(); ++imos){ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp: In member function ‘const char* scitbx::af::boost_python::cost_of_m_handle_in_af_shared::operator()(unsigned int, unsigned int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:367:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 367 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:375:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 375 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:383:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 383 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/selections.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/selections.h: In instantiation of ‘scitbx::af::shared scitbx::af::reindexing_array(std::size_t, const const_ref&) [with IntType = int; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:544:7: required from here 544 | reindexing_array, | ^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/selections.h:156:35: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 156 | SCITBX_ASSERT(iselection[i] < selectee_size); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/selections.h:156:7: note: in expansion of macro ‘SCITBX_ASSERT’ 156 | SCITBX_ASSERT(iselection[i] < selectee_size); | ^~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/c_grid_flex_conversions.h:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:10: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:84:46: required from here 84 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:85:45: required from here 85 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:86:36: required from here 86 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:87:36: required from here 87 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:88:36: required from here 88 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:89:36: required from here 89 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:90:37: required from here 90 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:91:39: required from here 91 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:92:39: required from here 92 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:93:39: required from here 93 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:94:39: required from here 94 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:95:39: required from here 95 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:96:53: required from here 96 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:97:53: required from here 97 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:98:53: required from here 98 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:100:50: required from here 100 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:101:51: required from here 101 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:102:55: required from here 102 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:103:55: required from here 103 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:104:55: required from here 104 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:105:58: required from here 105 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:106:53: required from here 106 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:107:53: required from here 107 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:108:53: required from here 108 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:110:54: required from here 110 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:112:46: required from here 112 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:113:46: required from here 113 | tuple_mapping_fixed_size >(); // scitbx/math/golay.h | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:115:49: required from here 115 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:117:50: required from here 117 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:118:50: required from here 118 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:119:50: required from here 119 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:120:50: required from here 120 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:122:53: required from here 122 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:123:53: required from here 123 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:124:53: required from here 124 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:127:51: required from here 127 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:128:52: required from here 128 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:129:42: required from here 129 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:130:42: required from here 130 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:131:45: required from here 131 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:132:63: required from here 132 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:133:45: required from here 133 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::sym_mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:134:49: required from here 134 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:135:51: required from here 135 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:136:52: required from here 136 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:137:42: required from here 137 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:138:42: required from here 138 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:139:45: required from here 139 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:140:45: required from here 140 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::sym_mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:141:49: required from here 141 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:143:60: required from here 143 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:144:60: required from here 144 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:146:54: required from here 146 | tuple_mapping_fixed_size, 2> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:147:54: required from here 147 | tuple_mapping_fixed_size, 3> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:148:54: required from here 148 | tuple_mapping_fixed_size, 4> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:149:54: required from here 149 | tuple_mapping_fixed_size, 2> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:150:54: required from here 150 | tuple_mapping_fixed_size, 3> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:151:54: required from here 151 | tuple_mapping_fixed_size, 4> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:153:64: required from here 153 | tuple_mapping_fixed_capacity(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 3>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:154:56: required from here 154 | tuple_mapping_fixed_capacity, 3> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 2>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:155:56: required from here 155 | tuple_mapping_fixed_capacity, 2> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 6>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:156:59: required from here 156 | tuple_mapping_fixed_capacity, 6> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 7>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:157:59: required from here 157 | tuple_mapping_fixed_capacity, 7> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 8>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:158:59: required from here 158 | tuple_mapping_fixed_capacity, 8> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 8>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_ext.cpp:159:59: required from here 159 | tuple_mapping_fixed_capacity, 8> >(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/rstbx/simulation/sim_xfel1.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain::resize(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain::resize(const size_type&) [with ElementType = cctbx::crystal_orientation]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const cctbx::crystal_orientation&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = cctbx::crystal_orientation]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:429:8: required from here 429 | def("first_index", f_w::first_index_a_s, (arg("value"))); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = bool]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:430:8: required from here 430 | def("last_index", f_w::last_index_a_s, (arg("value"))); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = bool]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/rstbx_integration_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_integration_ext.so.0 rstbx/apps/integration_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lann-cctbx -lann_adaptor -lspotfinder -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i'lib/rstbx_integration_ext.so.0.0.1' 'lib/rstbx_integration_ext.so'->'lib/rstbx_integration_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_size_t.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = bool]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o lib/rstbx_symmetry_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_symmetry_constraints_ext.so.0 rstbx/symmetry/constraints/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/rstbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_ext.so.0 rstbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/rstbx_symmetry_constraints_ext.so.0.0.1' 'lib/rstbx_symmetry_constraints_ext.so.0'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1' 'lib/rstbx_symmetry_constraints_ext.so'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_simulation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simulation_ext.so.0 rstbx/simulation/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/rstbx_ext.so.0.0.1' 'lib/rstbx_ext.so.0'->'lib/rstbx_ext.so.0.0.1' 'lib/rstbx_ext.so'->'lib/rstbx_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_float.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/rstbx_simulation_ext.so.0.0.1' 'lib/rstbx_simulation_ext.so.0'->'lib/rstbx_simulation_ext.so.0.0.1' 'lib/rstbx_simulation_ext.so'->'lib/rstbx_simulation_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i > scitbx::af::copy_slice(const const_ref >&, small) [with T = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i > scitbx::af::copy_slice(const const_ref >&, small) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i > scitbx::af::copy_slice(const const_ref >&, small) [with T = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned char]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_double_matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = float]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp: In function ‘scitbx::af::flex::type* scitbx::af::{anonymous}::from_list_or_tuple_of_lists_or_tuples(PyObject*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:138:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 138 | if (PyList_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:154:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 154 | if (PyTuple_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:190:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 190 | if (PyList_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:206:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 206 | if (PyTuple_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp: In function ‘std::string scitbx::af::{anonymous}::mathematica_form(const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:452:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 452 | for (int i=1; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 454 | if (i != indices.size() - 1) o << ","; | ~~^~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:365:26: required from here 365 | return matrix::norm_1(self); | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/norms.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | for (int i=0; i >&, small, const const_ref >&) [with T = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i > scitbx::af::copy_slice(const const_ref >&, small) [with T = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:536:8: required from here 536 | def( | ~~~^ 537 | "double_from_byte_str", | ~~~~~~~~~~~~~~~~~~~~~~~ 538 | shared_from_byte_str, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 | (arg("byte_str"))); | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i > scitbx::af::copy_slice(const const_ref >&, small) [with T = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = signed char]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = double]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:119:74: required from here 119 | double (*matrix_norm_1)(const_ref const &) = matrix::norm_1; | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/norms.h:16:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 16 | for (int i=0; i >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:177:11: required from here 145 | class_f_t | ~~~~~~~~~ 146 | .def("is_square_matrix", is_square_matrix) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | .def("matrix_diagonal", | ~~~~~~~~~~~~~~~~~~~~~~~ 148 | (shared(*)( | ~~~~~~~~~~~~~~~~~~~ 149 | const_ref > const&)) matrix_diagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 | .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 | (void(*)( | ~~~~~~~~~ 154 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | double const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 | arg("value")) | ~~~~~~~~~~~~~ 157 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 | (void(*)( | ~~~~~~~~~ 159 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | const_ref const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | arg("diagonal")) | ~~~~~~~~~~~~~~~~ 162 | .def("matrix_diagonal_add_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 | (void(*)( | ~~~~~~~~~ 164 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 | double const&)) matrix_diagonal_add_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 | arg("value")) | ~~~~~~~~~~~~~ 167 | .def("matrix_diagonal_sum", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 | (double(*)( | ~~~~~~~~~~~ 169 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 | .def("matrix_trace", | ~~~~~~~~~~~~~~~~~~~~ 171 | (double(*)( | ~~~~~~~~~~~ 172 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | .def("matrix_diagonal_product", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | (double(*)( | ~~~~~~~~~~~ 175 | const_ref > const&)) matrix_diagonal_product) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 | .def("matrix_norm_1", matrix_norm_1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 | .def("matrix_norm_inf", matrix::norm_inf) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/norms.h:32:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 32 | for (int i=0; i >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:178:11: required from here 145 | class_f_t | ~~~~~~~~~ 146 | .def("is_square_matrix", is_square_matrix) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | .def("matrix_diagonal", | ~~~~~~~~~~~~~~~~~~~~~~~ 148 | (shared(*)( | ~~~~~~~~~~~~~~~~~~~ 149 | const_ref > const&)) matrix_diagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 | .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 | (void(*)( | ~~~~~~~~~ 154 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | double const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 | arg("value")) | ~~~~~~~~~~~~~ 157 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 | (void(*)( | ~~~~~~~~~ 159 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | const_ref const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | arg("diagonal")) | ~~~~~~~~~~~~~~~~ 162 | .def("matrix_diagonal_add_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 | (void(*)( | ~~~~~~~~~ 164 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 | double const&)) matrix_diagonal_add_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 | arg("value")) | ~~~~~~~~~~~~~ 167 | .def("matrix_diagonal_sum", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 | (double(*)( | ~~~~~~~~~~~ 169 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 | .def("matrix_trace", | ~~~~~~~~~~~~~~~~~~~~ 171 | (double(*)( | ~~~~~~~~~~~ 172 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | .def("matrix_diagonal_product", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | (double(*)( | ~~~~~~~~~~~ 175 | const_ref > const&)) matrix_diagonal_product) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 | .def("matrix_norm_1", matrix_norm_1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 | .def("matrix_norm_inf", matrix::norm_inf) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 | .def("matrix_norm_frobenius", matrix::norm_frobenius) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/norms.h:46:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | for (int k=0; k < a_ij.size(); ++k) norm_accu(a_ij[k]); | ~~^~~~~~~~~~~~~ g++ -o lib/rstbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_array_family_flex_ext.so.0 rstbx/array_family/ext.o rstbx/array_family/flex_rstbx_arrays.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libann-cctbx.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/rstbx_array_family_flex_ext.so.0.0.1' 'lib/rstbx_array_family_flex_ext.so.0'->'lib/rstbx_array_family_flex_ext.so.0.0.1' 'lib/rstbx_array_family_flex_ext.so'->'lib/rstbx_array_family_flex_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_complex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = std::complex]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = std::complex]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = std::complex]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::complex]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/flex_std_string.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 24 | while (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | while (i < size && data[i] != '\n' && data[i] != '\r') i++; | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 27 | if (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28 | if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') { | ~~~~^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | if (j < size) { | ~~^~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:885:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 885 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string >; _Tp = __cxx11::basic_string]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/bits/stl_function.h:1441, from /usr/include/c++/15/functional:51, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:886:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 886 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string >; _Tp = __cxx11::basic_string]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::__cxx11::basic_string]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/flex_random.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_random.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_sort.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sort.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_histogram.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_histogram.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_weighted_histogram.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_weighted_histogram.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_mean_and_variance.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mean_and_variance.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_median.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_median.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_linear_interpolation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_linear_interpolation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_vec3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_vec2_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_median.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/basic_statistics.h: In instantiation of ‘scitbx::math::median_statistics scitbx::math::median_functor::dispersion(const scitbx::af::ref&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_median.cpp:31:26: required from ‘static scitbx::math::median_statistics scitbx::af::boost_python::median_functor_wrapper::dispersion(wt&, const scitbx::af::const_ref&) [with FloatType = double; wt = scitbx::math::median_functor]’ 31 | return O.dispersion(af::make_ref(buffer)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_median.cpp:40:13: required from ‘static void scitbx::af::boost_python::median_functor_wrapper::wrap(const char*) [with FloatType = double]’ 36 | class_(name, no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | .def(init<>()) | ~~~~~~~~~~~~~~ 38 | .def(init(arg("seed"))) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | .def("__call__", call, arg("data")) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | .def("dispersion", dispersion, arg("data")) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_median.cpp:63:41: required from here 63 | median_functor_wrapper::wrap("median_functor"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/basic_statistics.h:210:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 210 | for (int i=0; i < data.size(); ++i) { | ~~^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_vec3_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_sym_mat3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp: In function ‘scitbx::af::flex >::type* scitbx::af::{anonymous}::array_indices_as_double_from_array_focus_dimensions(const scitbx::vec2&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:128:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 128 | for(std::size_t i=0;i::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec2]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_mat3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/array_family/boost_python/flex_tiny_size_t_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::sym_mat3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::mat3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = tiny]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::sym_mat3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::sym_mat3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::sym_mat3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::af::tiny; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::af::tiny*; _Size = long unsigned int; _Tp = scitbx::af::tiny]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::sym_mat3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::sym_mat3*; _Size = long unsigned int; _Tp = scitbx::sym_mat3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::mat3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::mat3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::mat3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::mat3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::mat3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::mat3*; _Size = long unsigned int; _Tp = scitbx::mat3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec2; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec2&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec2]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec2]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec2&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec2*; _Size = long unsigned int; _Tp = scitbx::vec2]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/loops.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/loops.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/show_sizes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/show_sizes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/numpy_bridge.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DSCITBX_HAVE_NUMPY_INCLUDE -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/shared_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/cubicle_neighbors_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/fftpack/boost_python/fftpack_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/gridding.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/glmtbx/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/glmtbx/boost_python/ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/c++/15/cassert:46, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::vector; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:40:53: required from here 40 | shared_wrapper, rir>::wrap("stl_vector_unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::vector; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:41:51: required from here 41 | shared_wrapper, rir>::wrap("stl_vector_double"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:202:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = bool]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:202:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:203:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:203:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:204:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = long int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:204:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::set; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:42:50: required from here 42 | shared_wrapper, rir>::wrap("stl_set_unsigned") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:205:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = float]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:205:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:206:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:206:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = std::complex]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:207:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = std::complex]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:207:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:208:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:208:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:209:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = short int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:209:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:214:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:214:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:215:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:215:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:216:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:48:37: required from here 48 | shared_wrapper >::wrap("mat3_int"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘scitbx::af::versa > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:216:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:224:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:224:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:49:40: required from here 49 | shared_wrapper >::wrap("tiny_int_3"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:50:40: required from here 50 | shared_wrapper >::wrap("tiny_int_4"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/shared_ext.cpp:51:40: required from here 51 | shared_wrapper >::wrap("tiny_int_2"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/graphics_utils/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/graphics_utils/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors_ext.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp: In instantiation of ‘std::map > scitbx::cubicle_neighbors::neighbors_of(const scitbx::af::const_ref >&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors_ext.cpp:23:36: required from here 23 | .def("neighbors_of", &w_t::neighbors_of, ( | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp:61:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 61 | if (i_cub[0] < 0 || i_cub[0] >= n_cubicles[0]) continue; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp:63:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 63 | if (i_cub[1] < 0 || i_cub[1] >= n_cubicles[1]) continue; /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp:65:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 65 | if (i_cub[2] < 0 || i_cub[2] >= n_cubicles[2]) continue; In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicles.h: In instantiation of ‘scitbx::vec3 scitbx::cubicles::i_cubicle(const SiteType&) const [with SiteType = scitbx::vec3; CubicleContentType = std::vector::cubicle_site, std::allocator::cubicle_site> >; FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors.hpp:43:30: required from ‘scitbx::cubicle_neighbors::cubicle_neighbors(const scitbx::af::const_ref >&, const FloatType&, const FloatType&) [with FloatType = double]’ 43 | cubicles_.i_cubicle(main_sites_cart[i_seq])); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value; Value = scitbx::cubicle_neighbors<>; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<3>::apply::execute(PyObject*, t0, t1, t2) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector3 >&, const double&, const double&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const double&; t2 = const double&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector3 >&, const double&, const double&>; Arity = boost::mpl::size >&, const double&, const double&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector3 >&, const double&, const double&>; NArgs = boost::mpl::size >&, const double&, const double&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector3 >&, const double&, const double&>; NArgs = boost::mpl::size >&, const double&, const double&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const double&, const double&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const double&, const double&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const double&, const double&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const double&, const double&>; W = scitbx::cubicle_neighbors<>; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicle_neighbors_ext.cpp:16:13: required from here 15 | class_("cubicle_neighbors", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 16 | .def(init< | ~~~~^~~~~~ 17 | af::const_ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 18 | double const&, | ~~~~~~~~~~~~~~ 19 | double const&>(( | ~~~~~~~~~~~~~~~~ 20 | arg("main_sites_cart"), | ~~~~~~~~~~~~~~~~~~~~~~~ 21 | arg("cubicle_edge"), | ~~~~~~~~~~~~~~~~~~~~ 22 | arg("epsilon")=1.e-6))) | ~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 176 | else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1; | ~~^~~~~~~~~~~~~~~~~~ g++ -o scitbx/iso_surface/iso_surface_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/iso_surface/iso_surface_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_cubicle_neighbors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_cubicle_neighbors_ext.so.0 scitbx/cubicle_neighbors_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' 'lib/scitbx_cubicle_neighbors_ext.so.0'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' 'lib/scitbx_cubicle_neighbors_ext.so'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' g++ -o scitbx/lbfgs/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -DSCITBX_LBFGS_HAVE_LBFGS_FEM -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgs/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_graphics_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_graphics_utils_ext.so.0 scitbx/graphics_utils/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_graphics_utils_ext.so.0.0.1' 'lib/scitbx_graphics_utils_ext.so.0'->'lib/scitbx_graphics_utils_ext.so.0.0.1' 'lib/scitbx_graphics_utils_ext.so'->'lib/scitbx_graphics_utils_ext.so.0.0.1' g++ -o scitbx/lbfgs/lbfgs_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable scitbx/lbfgs/lbfgs_fem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem.hpp:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/lbfgs_fem.hpp:1, from scitbx/lbfgs/lbfgs_fem.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ g++ -o lib/scitbx_iso_surface_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_iso_surface_ext.so.0 scitbx/iso_surface/iso_surface_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o scitbx/lbfgsb/boost_python/lbfgsb_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp Create symlinks for: 'lib/scitbx_iso_surface_ext.so.0.0.1' 'lib/scitbx_iso_surface_ext.so.0'->'lib/scitbx_iso_surface_ext.so.0.0.1' 'lib/scitbx_iso_surface_ext.so'->'lib/scitbx_iso_surface_ext.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/linalg/boost_python/linalg_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/linalg_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/linalg/boost_python/matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/matrix.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_glmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_glmtbx_ext.so.0 scitbx/glmtbx/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_glmtbx_ext.so.0.0.1' 'lib/scitbx_glmtbx_ext.so.0'->'lib/scitbx_glmtbx_ext.so.0.0.1' 'lib/scitbx_glmtbx_ext.so'->'lib/scitbx_glmtbx_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/cholesky.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/linalg/boost_python/householder.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/householder.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/serialization/base_256.h:2, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/floating_point_epsilon.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:142:22: required from ‘bool scitbx::lbfgsb::minimizer::process(const scitbx::af::ref&, const FloatType&, const scitbx::af::ref&, bool) [with FloatType = double]’ 142 | raw::setulb( | ~~~~~~~~~~~^ 143 | n_, | ~~~ 144 | m_, | ~~~ 145 | raw::ref1(x), | ~~~~~~~~~~~~~~~~~~~~~~~~ 146 | raw::ref1(l_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | raw::ref1(u_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | raw::ref1(nbd_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 | f_, | ~~~ 150 | raw::ref1(g), | ~~~~~~~~~~~~~~~~~~~~~~~~ 151 | factr_, | ~~~~~~~ 152 | pgtol_, | ~~~~~~~ 153 | raw::ref1(wa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | raw::ref1(iwa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | task_, | ~~~~~~ 156 | iprint_, | ~~~~~~~~ 157 | csave_, | ~~~~~~~ 158 | raw::ref1(lsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 | raw::ref1(isave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | raw::ref1(dsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | enable_stp_init_); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:29:25: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 29 | .def("process", &w_t::process, ( | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:974:19: required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 974 | write_ref1(" X =", x); | ~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3786:15: required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 3786 | prn3lb(n,x,f,task,iprint,info,itfile, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3787 | iter,nfgv,nintol,nskip,nact,sbgnrm, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3788 | zero,nint,word,iback,stp,xstep,k, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3789 | cachyt,sbtime,lnscht); | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:142:22: required from ‘bool scitbx::lbfgsb::minimizer::process(const scitbx::af::ref&, const FloatType&, const scitbx::af::ref&, bool) [with FloatType = double]’ 142 | raw::setulb( | ~~~~~~~~~~~^ 143 | n_, | ~~~ 144 | m_, | ~~~ 145 | raw::ref1(x), | ~~~~~~~~~~~~~~~~~~~~~~~~ 146 | raw::ref1(l_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | raw::ref1(u_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | raw::ref1(nbd_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 | f_, | ~~~ 150 | raw::ref1(g), | ~~~~~~~~~~~~~~~~~~~~~~~~ 151 | factr_, | ~~~~~~~ 152 | pgtol_, | ~~~~~~~ 153 | raw::ref1(wa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | raw::ref1(iwa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | task_, | ~~~~~~ 156 | iprint_, | ~~~~~~~~ 157 | csave_, | ~~~~~~~ 158 | raw::ref1(lsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 | raw::ref1(isave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | raw::ref1(dsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | enable_stp_init_); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:29:25: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 29 | .def("process", &w_t::process, ( | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j::minimizer(const int&, const int&, scitbx::af::shared, scitbx::af::shared, scitbx::af::shared, bool, const FloatType&, const FloatType&, const int&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5, A6, A7, A8) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value >; A3 = boost::python::objects::reference_to_value >; A4 = boost::python::objects::reference_to_value >; A5 = bool; A6 = boost::python::objects::reference_to_value; A7 = boost::python::objects::reference_to_value; A8 = boost::python::objects::reference_to_value; Value = scitbx::lbfgsb::minimizer; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<9>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5, t6, t7, t8) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; PyObject = _object; t0 = const int&; t1 = const int&; t2 = scitbx::af::shared; t3 = scitbx::af::shared; t4 = scitbx::af::shared; t5 = bool; t6 = const double&; t7 = const double&; t8 = const int&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; Arity = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_, not_specified, not_specified, not_specified>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; NArgs = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; NArgs = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedT = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >; classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedVisitor = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>; W = scitbx::lbfgsb::minimizer; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:20:13: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 19 | class_("minimizer", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 20 | .def(init, | ~~~~~~~~~~~~~~~~~~~~~~ 23 | af::shared, | ~~~~~~~~~~~~~~~~~~~~~~ 24 | af::shared, | ~~~~~~~~~~~~~~~~ 25 | bool, | ~~~~~ 26 | FloatType const&, | ~~~~~~~~~~~~~~~~~ 27 | FloatType const&, | ~~~~~~~~~~~~~~~~~ 28 | int const&>()) | ~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:118:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 118 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:118:9: note: in expansion of macro ‘SCITBX_ASSERT’ 118 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:119:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 119 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:119:9: note: in expansion of macro ‘SCITBX_ASSERT’ 119 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:120:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 120 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb.h:120:9: note: in expansion of macro ‘SCITBX_ASSERT’ 120 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ g++ -o lib/scitbx_fftpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_fftpack_ext.so.0 scitbx/fftpack/boost_python/fftpack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o scitbx/linalg/boost_python/svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/svd.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_fftpack_ext.so.0.0.1' 'lib/scitbx_fftpack_ext.so.0'->'lib/scitbx_fftpack_ext.so.0.0.1' 'lib/scitbx_fftpack_ext.so'->'lib/scitbx_fftpack_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/eigensystem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/eigensystem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_lbfgs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgs_ext.so.0 scitbx/lbfgs/ext.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_lbfgs_ext.so.0.0.1' 'lib/scitbx_lbfgs_ext.so.0'->'lib/scitbx_lbfgs_ext.so.0.0.1' 'lib/scitbx_lbfgs_ext.so'->'lib/scitbx_lbfgs_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/lapack_fem_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_lbfgsb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgsb_ext.so.0 scitbx/lbfgsb/boost_python/lbfgsb_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_timer.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_lbfgsb_ext.so.0.0.1' 'lib/scitbx_lbfgsb_ext.so.0'->'lib/scitbx_lbfgsb_ext.so.0.0.1' 'lib/scitbx_lbfgsb_ext.so'->'lib/scitbx_lbfgsb_ext.so.0.0.1' g++ -o scitbx/lstbx/boost_python/lstbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lstbx/boost_python/lstbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lstbx/boost_python/normal_equations.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lstbx/boost_python/normal_equations.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp: In function ‘int scitbx::lapack::boost_python::dsyev_wrapper(const std::string&, const std::string&, const scitbx::af::ref >&, const scitbx::af::ref&, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:246:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 246 | SCITBX_ASSERT(w.size() == n); | ~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:246:5: note: in expansion of macro ‘SCITBX_ASSERT’ 246 | SCITBX_ASSERT(w.size() == n); | ^~~~~~~~~~~~~ g++ -o scitbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/math_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/basic_statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/basic_statistics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/gaussian.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/gaussian.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_array_family_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_shared_ext.so.0 scitbx/array_family/boost_python/shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_numpy313 /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_numpy313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_array_family_shared_ext.so.0.0.1' 'lib/scitbx_array_family_shared_ext.so.0'->'lib/scitbx_array_family_shared_ext.so.0.0.1' 'lib/scitbx_array_family_shared_ext.so'->'lib/scitbx_array_family_shared_ext.so.0.0.1' g++ -o scitbx/math/boost_python/golay.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/golay.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/minimum_covering_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/minimum_covering_sphere.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_flex_ext.so.0 scitbx/array_family/boost_python/flex_ext.o scitbx/array_family/boost_python/flex_grid.o scitbx/array_family/boost_python/flex_bool.o scitbx/array_family/boost_python/flex_size_t.o scitbx/array_family/boost_python/flex_int.o scitbx/array_family/boost_python/flex_float.o scitbx/array_family/boost_python/flex_double.o scitbx/array_family/boost_python/flex_double_matrix.o scitbx/array_family/boost_python/flex_complex_double.o scitbx/array_family/boost_python/flex_std_string.o scitbx/array_family/boost_python/flex_random.o scitbx/array_family/boost_python/flex_sort.o scitbx/array_family/boost_python/flex_histogram.o scitbx/array_family/boost_python/flex_weighted_histogram.o scitbx/array_family/boost_python/flex_mean_and_variance.o scitbx/array_family/boost_python/flex_median.o scitbx/array_family/boost_python/flex_linear_interpolation.o scitbx/array_family/boost_python/flex_vec3_double.o scitbx/array_family/boost_python/flex_vec2_double.o scitbx/array_family/boost_python/flex_vec3_int.o scitbx/array_family/boost_python/flex_sym_mat3_double.o scitbx/array_family/boost_python/flex_mat3_double.o scitbx/array_family/boost_python/flex_tiny_size_t_2.o scitbx/array_family/boost_python/loops.o scitbx/array_family/boost_python/show_sizes.o scitbx/array_family/boost_python/numpy_bridge.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_numpy313 g++ -o lib/scitbx_linalg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_linalg_ext.so.0 scitbx/linalg/boost_python/linalg_ext.o scitbx/linalg/boost_python/matrix.o scitbx/linalg/boost_python/cholesky.o scitbx/linalg/boost_python/householder.o scitbx/linalg/boost_python/svd.o scitbx/linalg/boost_python/eigensystem.o scitbx/linalg/boost_python/lapack_fem_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_linalg_ext.so.0.0.1' 'lib/scitbx_linalg_ext.so.0'->'lib/scitbx_linalg_ext.so.0.0.1' 'lib/scitbx_linalg_ext.so'->'lib/scitbx_linalg_ext.so.0.0.1' g++ -o scitbx/math/boost_python/principal_axes_of_inertia.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/principal_axes_of_inertia.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_numpy313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o scitbx/math/boost_python/row_echelon.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/row_echelon.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/tensor_rank_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/chebyshev.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/chebyshev.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_array_family_flex_ext.so.0.0.1' 'lib/scitbx_array_family_flex_ext.so.0'->'lib/scitbx_array_family_flex_ext.so.0.0.1' 'lib/scitbx_array_family_flex_ext.so'->'lib/scitbx_array_family_flex_ext.so.0.0.1' g++ -o scitbx/math/boost_python/icosahedron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/icosahedron.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/slatec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/slatec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/line_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/line_search.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/r3_rotation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/r3_rotation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_lstbx_normal_equations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lstbx_normal_equations_ext.so.0 scitbx/lstbx/boost_python/lstbx_ext.o scitbx/lstbx/boost_python/normal_equations.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o scitbx/math/boost_python/resample.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/resample.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' 'lib/scitbx_lstbx_normal_equations_ext.so.0'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' 'lib/scitbx_lstbx_normal_equations_ext.so'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' g++ -o scitbx/math/boost_python/quadrature.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/quadrature.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/unimodular_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/unimodular_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/halton.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/halton.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/least_squares_plane.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/least_squares_plane.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/continued_fraction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/continued_fraction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/numeric_limits.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/numeric_limits.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/distributions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/distributions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/exp_functions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/exp_functions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/zernike.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/zernike.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/zernike_moments.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/zernike_moments.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/2d_zernike_moments.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/2d_zernike_moments.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/weighted_covariance.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/weighted_covariance.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/rotation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/rotation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/interpolation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/interpolation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/tetrahedron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/tetrahedron.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/angle_derivative.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/boost_python/angle_derivative.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/minpack/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/r3_utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/r3_utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/raw.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/levenberg_marquardt.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/ext.cpp:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/levenberg_marquardt.h: In member function ‘void scitbx::minpack::levenberg_marquardt::process_fvec(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/levenberg_marquardt.h:80:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | SCITBX_ASSERT(fvec.size() == m); | ~~~~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/minpack/levenberg_marquardt.h:80:9: note: in expansion of macro ‘SCITBX_ASSERT’ 80 | SCITBX_ASSERT(fvec.size() == m); | ^~~~~~~~~~~~~ g++ -o scitbx/random/boost_python/random_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/random/boost_python/random_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/random/boost_python/basic_distributions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/random/boost_python/basic_distributions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/rigid_body/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/vector.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/vector.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/matrix.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_r3_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_r3_utils_ext.so.0 scitbx/r3_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_r3_utils_ext.so.0.0.1' 'lib/scitbx_r3_utils_ext.so.0'->'lib/scitbx_r3_utils_ext.so.0.0.1' 'lib/scitbx_r3_utils_ext.so'->'lib/scitbx_r3_utils_ext.so.0.0.1' g++ -o scitbx/sparse/boost_python/approx_equal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/approx_equal.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_minpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_minpack_ext.so.0 scitbx/minpack/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_minpack -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o scitbx/sparse/boost_python/random.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/random.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_minpack_ext.so.0.0.1' 'lib/scitbx_minpack_ext.so.0'->'lib/scitbx_minpack_ext.so.0.0.1' 'lib/scitbx_minpack_ext.so'->'lib/scitbx_minpack_ext.so.0.0.1' g++ -o scitbx/sparse/boost_python/lu_factorization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/lu_factorization.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rotr3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/spatial_lib.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/featherstone.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/tardy.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp:14: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 4]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:361:21: required from ‘scitbx::rotr3 scitbx::rigid_body::joint_lib::six_dof_aja_simplified(const scitbx::vec3&, const scitbx::af::const_ref&) [with FloatType = double]’ 361 | af::tiny qe(&q[0], &q[4]); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp:24:49: required from here 24 | result = joint_lib::six_dof_aja_simplified(center_of_mass, q); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_matrix.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/spatial_lib.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 6]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:44:33: required from ‘scitbx::af::small::small(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 6]’ 44 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/featherstone.h:683:31: required from ‘scitbx::af::shared > scitbx::rigid_body::featherstone::system_model::inverse_dynamics(const scitbx::af::const_ref >&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&) [with FloatType = double]’ 683 | tau_array[ib] = af::small(f[ib].begin(), f[ib].end()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/featherstone.h:705:21: required from ‘scitbx::af::shared scitbx::rigid_body::featherstone::system_model::inverse_dynamics_packed(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with FloatType = double]’ 705 | tau_array = inverse_dynamics( | ^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp:120:46: required from here 120 | .def("inverse_dynamics_packed", &wt::inverse_dynamics_packed, ( | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/tardy.h: In instantiation of ‘scitbx::af::shared > > scitbx::rigid_body::tardy::construct_bodies(const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const boost::python::api::object&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/tardy.h:203:54: required from ‘scitbx::rigid_body::tardy::model::model(const boost::python::api::object&, const scitbx::af::shared >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, const ft&) [with FloatType = double; ft = double]’ 203 | featherstone::system_model(construct_bodies( | ~~~~~~~~~~~~~~~~^ 204 | sites_.const_ref(), | ~~~~~~~~~~~~~~~~~~~ 205 | masses_.const_ref(), | ~~~~~~~~~~~~~~~~~~~~ 206 | tardy_tree_.attr("cluster_manager"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 | near_singular_hinges_angular_tolerance_deg_)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value&>; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; Value = scitbx::rigid_body::tardy::model<>; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<6>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; PyObject = _object; t0 = const boost::python::api::object&; t1 = const scitbx::af::shared >&; t2 = const scitbx::af::shared&; t3 = const boost::python::api::object&; t4 = const boost::python::api::object&; t5 = const double&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; Arity = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; NArgs = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:344:31: required from ‘static void boost::python::detail::define_class_init_helper::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, boost::python::detail::keyword_range) [with ClassT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; NArgs = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; int NDefaults = 1; boost::python::detail::keyword_range = std::pair]’ 344 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; DerivedT = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional > >; classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; DerivedVisitor = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >; W = scitbx::rigid_body::tardy::model<>; X1 = boost::python::bases >; X2 = boost::noncopyable_::noncopyable; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp:151:13: required from here 146 | class_ >, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | boost::noncopyable | ~~~~~~~~~~~~~~~~~~ 149 | >("tardy_model", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .enable_pickling() | ~~~~~~~~~~~~~~~~~~ 151 | .def(init< | ~~~~^~~~~~ 152 | object const&, | ~~~~~~~~~~~~~~ 153 | af::shared > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | af::shared const&, | ~~~~~~~~~~~~~~~~~~~~~~ 155 | object const&, | ~~~~~~~~~~~~~~ 156 | object const&, | ~~~~~~~~~~~~~~ 157 | optional >(( | ~~~~~~~~~~~~~~~~~~~~~~~ 158 | arg("labels"), | ~~~~~~~~~~~~~~ 159 | arg("sites"), | ~~~~~~~~~~~~~ 160 | arg("masses"), | ~~~~~~~~~~~~~~ 161 | arg("tardy_tree"), | ~~~~~~~~~~~~~~~~~~ 162 | arg("potential_obj"), | ~~~~~~~~~~~~~~~~~~~~~ 163 | arg("near_singular_hinges_angular_tolerance_deg")=5))) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/tardy.h:163:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 163 | SCITBX_ASSERT(body->parent < nc); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/tardy.h:163:9: note: in expansion of macro ‘SCITBX_ASSERT’ 163 | SCITBX_ASSERT(body->parent < nc); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 1]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:648:13: required from ‘boost::shared_ptr > scitbx::rigid_body::joint_lib::revolute::new_q(const scitbx::af::const_ref&) const [with FloatType = double]’ 648 | af::tiny(q.begin(), q.end()))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:643:5: required from here 643 | new_q( | ^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 12]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:45:16: required from ‘scitbx::af::tiny scitbx::rigid_body::joint_lib::rbda_eq_4_13(const scitbx::af::tiny&) [with FloatType = double]’ 45 | return af::tiny(coeffs, coeffs+4*3) * ft(0.5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:279:21: required from ‘boost::shared_ptr > scitbx::rigid_body::joint_lib::six_dof::time_step_position(const scitbx::af::const_ref&, const ft&) const [with FloatType = double; ft = double]’ 279 | rbda_eq_4_13(unit_quaternion), w_body_frame); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:271:5: required from here 271 | time_step_position( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 16]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:79:16: required from ‘scitbx::af::tiny scitbx::rigid_body::joint_lib::d_unit_quaternion_d_qe_matrix(const scitbx::af::tiny&) [with FloatType = double]’ 79 | return af::tiny(coeffs, coeffs+4*4) / n3; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:317:58: required from ‘scitbx::af::small scitbx::rigid_body::joint_lib::six_dof::tau_as_d_e_pot_d_q(const scitbx::af::small&) const [with FloatType = double]’ 317 | af::tiny d = d_unit_quaternion_d_qe_matrix(qe); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:313:5: required from here 313 | tau_as_d_e_pot_d_q( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 7]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:44:33: required from ‘scitbx::af::small::small(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 7]’ 44 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:324:24: required from ‘scitbx::af::small scitbx::rigid_body::joint_lib::six_dof::tau_as_d_e_pot_d_q(const scitbx::af::small&) const [with FloatType = double]’ 324 | af::small result(cn.begin(), cn.end()); | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/joint_lib.h:313:5: required from here 313 | tau_as_d_e_pot_d_q( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o scitbx/sparse/boost_python/sparse_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/boost_python/sparse_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/stl/map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/stl/set_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_math_ext.so.0 scitbx/math/boost_python/math_ext.o scitbx/math/boost_python/basic_statistics.o scitbx/math/boost_python/gaussian.o scitbx/math/boost_python/golay.o scitbx/math/boost_python/minimum_covering_sphere.o scitbx/math/boost_python/principal_axes_of_inertia.o scitbx/math/boost_python/row_echelon.o scitbx/math/boost_python/tensor_rank_2.o scitbx/math/boost_python/chebyshev.o scitbx/math/boost_python/icosahedron.o scitbx/math/boost_python/slatec.o scitbx/math/boost_python/line_search.o scitbx/math/boost_python/r3_rotation.o scitbx/math/boost_python/resample.o scitbx/math/boost_python/quadrature.o scitbx/math/boost_python/unimodular_generator.o scitbx/math/boost_python/halton.o scitbx/math/boost_python/least_squares_plane.o scitbx/math/boost_python/continued_fraction.o scitbx/math/boost_python/numeric_limits.o scitbx/math/boost_python/distributions.o scitbx/math/boost_python/exp_functions.o scitbx/math/boost_python/zernike.o scitbx/math/boost_python/zernike_moments.o scitbx/math/boost_python/2d_zernike_moments.o scitbx/math/boost_python/weighted_covariance.o scitbx/math/boost_python/rotation.o scitbx/math/boost_python/interpolation.o scitbx/math/boost_python/tetrahedron.o scitbx/math/boost_python/angle_derivative.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_slatec -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_matrix.h:4: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/15/memory:71, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/array_as_list.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/rigid_body/ext.cpp:3: /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/15/bits/stl_uninitialized.h:526:5: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::af::tiny*; _Size = long unsigned int; _Tp = scitbx::af::tiny]’ declared here 526 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/stl/vector_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_ext.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_wrapper.h: In static member function ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_wrapper.h:52:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 52 | bp::class_ >(python_name.c_str()) | ^~~~~~~~ In file included from /usr/include/c++/15/memory:80, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_wrapper.h:4: /usr/include/c++/15/bits/unique_ptr.h:58:28: note: declared here 58 | template class auto_ptr; | ^~~~~~~~ Create symlinks for: 'lib/scitbx_math_ext.so.0.0.1' 'lib/scitbx_math_ext.so.0'->'lib/scitbx_math_ext.so.0.0.1' 'lib/scitbx_math_ext.so'->'lib/scitbx_math_ext.so.0.0.1' In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::set, std::allocator >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::set, std::allocator >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_wrapper.h:68:52: required from ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&) [with ElementType = unsigned int; std::string = std::__cxx11::basic_string]’ 68 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 69 | w_t, scitbx::boost_python::container_conversions::set_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_ext.cpp:9:32: required from here 9 | set_wrapper::wrap("unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::set, std::less >, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::set, std::less >, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_wrapper.h:68:52: required from ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&) [with ElementType = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]’ 68 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 69 | w_t, scitbx::boost_python::container_conversions::set_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/set_ext.cpp:10:35: required from here 10 | set_wrapper::wrap("stl_string"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/suffixtree/boost_python/suffixtree_shared_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain::resize(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/suffixtree/boost_python/suffixtree_single_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/suffixtree/boost_python/suffixtree_single_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_random_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_random_ext.so.0 scitbx/random/boost_python/random_ext.o scitbx/random/boost_python/basic_distributions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_random_ext.so.0.0.1' 'lib/scitbx_random_ext.so.0'->'lib/scitbx_random_ext.so.0.0.1' 'lib/scitbx_random_ext.so'->'lib/scitbx_random_ext.so.0.0.1' g++ -o scitbx/suffixtree/boost_python/object_extensions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/suffixtree/boost_python/object_extensions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_wrapper.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_ext.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_ext.cpp:10:35: required from here 10 | vector_wrapper::wrap("unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_ext.cpp:11:33: required from here 11 | vector_wrapper::wrap("double"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = std::set; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/stl/vector_ext.cpp:14:50: required from here 14 | vector_wrapper, rir>::wrap("set_unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/scitbx_suffixtree_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_shared_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_suffixtree_shared_ext.so.0.0.1' 'lib/scitbx_suffixtree_shared_ext.so.0'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1' 'lib/scitbx_suffixtree_shared_ext.so'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1' g++ -o scitbx/wigner/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/wigner/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/ab_initio/ab_initio_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/ab_initio/ab_initio_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_stl_set_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_set_ext.so.0 scitbx/stl/set_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_stl_set_ext.so.0.0.1' 'lib/scitbx_stl_set_ext.so.0'->'lib/scitbx_stl_set_ext.so.0.0.1' 'lib/scitbx_stl_set_ext.so'->'lib/scitbx_stl_set_ext.so.0.0.1' g++ -o smtbx/array_family/af_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/array_family/af_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_sparse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_sparse_ext.so.0 scitbx/sparse/boost_python/vector.o scitbx/sparse/boost_python/matrix.o scitbx/sparse/boost_python/approx_equal.o scitbx/sparse/boost_python/random.o scitbx/sparse/boost_python/lu_factorization.o scitbx/sparse/boost_python/sparse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_sparse_ext.so.0.0.1' 'lib/scitbx_sparse_ext.so.0'->'lib/scitbx_sparse_ext.so.0.0.1' 'lib/scitbx_sparse_ext.so'->'lib/scitbx_sparse_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_ab_initio_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_ab_initio_ext.so.0 smtbx/ab_initio/ab_initio_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/smtbx_ab_initio_ext.so.0.0.1' 'lib/smtbx_ab_initio_ext.so.0'->'lib/smtbx_ab_initio_ext.so.0.0.1' 'lib/smtbx_ab_initio_ext.so'->'lib/smtbx_ab_initio_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/constraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/constraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_rigid_body_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_rigid_body_ext.so.0 scitbx/rigid_body/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/smtbx_array_family_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_array_family_ext.so.0 smtbx/array_family/af_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm Create symlinks for: 'lib/scitbx_rigid_body_ext.so.0.0.1' 'lib/scitbx_rigid_body_ext.so.0'->'lib/scitbx_rigid_body_ext.so.0.0.1' 'lib/scitbx_rigid_body_ext.so'->'lib/scitbx_rigid_body_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/direction.cpp /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/smtbx_array_family_ext.so.0.0.1' 'lib/smtbx_array_family_ext.so.0'->'lib/smtbx_array_family_ext.so.0.0.1' 'lib/smtbx_array_family_ext.so'->'lib/smtbx_array_family_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/geometrical_hydrogens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_wigner_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_wigner_ext.so.0 scitbx/wigner/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_wigner_ext.so.0.0.1' 'lib/scitbx_wigner_ext.so.0'->'lib/scitbx_wigner_ext.so.0.0.1' 'lib/scitbx_wigner_ext.so'->'lib/scitbx_wigner_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/independent_scalar_parameters.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/occupancy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/occupancy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_stl_vector_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_vector_ext.so.0 scitbx/stl/vector_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_stl_vector_ext.so.0.0.1' 'lib/scitbx_stl_vector_ext.so.0'->'lib/scitbx_stl_vector_ext.so.0.0.1' 'lib/scitbx_stl_vector_ext.so'->'lib/scitbx_stl_vector_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/rigid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/rigid.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/same_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/scaled_adp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/scaled_adp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_suffixtree_single_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_single_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_single_ext.o scitbx/suffixtree/boost_python/object_extensions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_suffixtree_single_ext.so.0.0.1' 'lib/scitbx_suffixtree_single_ext.so.0'->'lib/scitbx_suffixtree_single_ext.so.0.0.1' 'lib/scitbx_suffixtree_single_ext.so'->'lib/scitbx_suffixtree_single_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/scatterer_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/scatterer_parameters.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/shared.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/shared.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_map_ext.so.0 scitbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/scitbx_stl_map_ext.so.0.0.1' 'lib/scitbx_stl_map_ext.so.0'->'lib/scitbx_stl_map_ext.so.0.0.1' 'lib/scitbx_stl_map_ext.so'->'lib/scitbx_stl_map_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/symmetry_equivalent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/boost_python/least_squares_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/boost_python/least_squares_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/boost_python/weighting_schemes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/boost_python/weighting_schemes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/boost_python/least_squares.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/boost_python/least_squares.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/restraints/boost_python/origin_fixing.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/restraints/boost_python/origin_fixing.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/restraints/boost_python/restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/restraints/boost_python/restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/stl/map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/stl/map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/structure_factors/direct/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/structure_factors/direct/boost_python/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/structure_factors/direct/boost_python/standard_xray.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/structure_factors/direct/boost_python/standard_xray.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/array_family/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/array_family/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/src -Ispotfinder/array_family/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/flex_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/array_family/flex_distl_spot.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/array_family/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/src -Ispotfinder/array_family/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/array_family/flex_distl_spot.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/boost_python/distltbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/distltbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_stl_map_ext.so.0 smtbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/smtbx_stl_map_ext.so.0.0.1' 'lib/smtbx_stl_map_ext.so.0'->'lib/smtbx_stl_map_ext.so.0.0.1' 'lib/smtbx_stl_map_ext.so'->'lib/smtbx_stl_map_ext.so.0.0.1' g++ -o spotfinder/diffraction/geometry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/diffraction/geometry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/dxtbx_toolbox/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/dxtbx_toolbox/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/dxtbx_toolbox/src -Ispotfinder/dxtbx_toolbox/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/dxtbx_toolbox/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/dxtbx_toolbox/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_refinement_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_constraints_ext.so.0 smtbx/refinement/constraints/boost_python/affine.o smtbx/refinement/constraints/boost_python/constraints_ext.o smtbx/refinement/constraints/boost_python/direction.o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o smtbx/refinement/constraints/boost_python/occupancy.o smtbx/refinement/constraints/boost_python/reparametrisation.o smtbx/refinement/constraints/boost_python/rigid.o smtbx/refinement/constraints/boost_python/same_group.o smtbx/refinement/constraints/boost_python/scaled_adp.o smtbx/refinement/constraints/boost_python/scatterer_parameters.o smtbx/refinement/constraints/boost_python/shared.o smtbx/refinement/constraints/boost_python/special_position.o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/smtbx_refinement_constraints_ext.so.0.0.1' 'lib/smtbx_refinement_constraints_ext.so.0'->'lib/smtbx_refinement_constraints_ext.so.0.0.1' 'lib/smtbx_refinement_constraints_ext.so'->'lib/smtbx_refinement_constraints_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/boost_python/hough_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/dxtbx/src -I/usr/include/python3.13 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/spotfinder/core_toolbox/boost_python/hough_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/std_pair_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=std_pair_ext.so.0 boost_adaptbx/std_pair_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lboost_python313 -lm -lboost_timer /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_timer.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/std_pair_ext.so.0.0.1' 'lib/std_pair_ext.so.0'->'lib/std_pair_ext.so.0.0.1' 'lib/std_pair_ext.so'->'lib/std_pair_ext.so.0.0.1' g++ -o mmtbx/masks/tst_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/mmtbx/masks/tst_mask.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/smtbx_refinement_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_restraints_ext.so.0 smtbx/refinement/restraints/boost_python/origin_fixing.o smtbx/refinement/restraints/boost_python/restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/smtbx_refinement_restraints_ext.so.0.0.1' 'lib/smtbx_refinement_restraints_ext.so.0'->'lib/smtbx_refinement_restraints_ext.so.0.0.1' 'lib/smtbx_refinement_restraints_ext.so'->'lib/smtbx_refinement_restraints_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/regression_test_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/usr/include/python3.13 /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/list.hpp:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:156:78: required from here 156 | scitbx::boost_python::container_conversions::variable_capacity_policy>(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::__cxx11::list; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::__cxx11::list; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:160:72: required from here 160 | scitbx::boost_python::container_conversions::linked_list_policy>(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:164:71: required from here 164 | scitbx::boost_python::container_conversions::fixed_size_policy>(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:168:71: required from here 168 | scitbx::boost_python::container_conversions::fixed_size_policy>(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:172:75: required from here 172 | scitbx::boost_python::container_conversions::fixed_capacity_policy>(); | ^ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/spotfinder_dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_dxtbx_ext.so.0 spotfinder/dxtbx_toolbox/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -ldxtbxspotfinder -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/spotfinder_dxtbx_ext.so.0.0.1' 'lib/spotfinder_dxtbx_ext.so.0'->'lib/spotfinder_dxtbx_ext.so.0.0.1' 'lib/spotfinder_dxtbx_ext.so'->'lib/spotfinder_dxtbx_ext.so.0.0.1' g++ -o scitbx/array_family/tst_accessors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/masks/tst_mask -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread mmtbx/masks/tst_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lmmtbx_masks -liotbx_pdb -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:15: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<1>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:127:11: required from here 127 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<4>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:145:11: required from here 145 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ g++ -o lib/spotfinder_hough_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_hough_ext.so.0 spotfinder/core_toolbox/boost_python/hough_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<2>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:172:11: required from here 172 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<3>]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:202:11: required from here 202 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:248:11: required from here 248 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:280:11: required from here 280 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:326:11: required from here 326 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_accessors.cpp:371:11: required from here 371 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ g++ -o scitbx/array_family/tst_af_1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'lib/spotfinder_hough_ext.so.0.0.1' 'lib/spotfinder_hough_ext.so.0'->'lib/spotfinder_hough_ext.so.0.0.1' 'lib/spotfinder_hough_ext.so'->'lib/spotfinder_hough_ext.so.0.0.1' g++ -o scitbx/array_family/tst_af_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/tiny_plain_apply.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/scoped_array.hpp:13, from /usr/include/boost/scoped_array.hpp:13, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:10: /usr/include/boost/bind.hpp: At global scope: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::array_exercise::run_2() [with ArrayType = scitbx::af::small_plain]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small_plain]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:619:52: required from here 619 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::small]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:621:46: required from here 621 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::shared_plain]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::shared_plain]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:624:48: required from here 624 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::shared]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::shared]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:629:42: required from here 629 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_1() [with ArrayType = scitbx::af::versa_plain; AltArrayType = scitbx::af::versa_plain >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:415:12: required from ‘static void {anonymous}::versa_exercise::run() [with ArrayType = scitbx::af::versa_plain; AltArrayType = scitbx::af::versa_plain >]’ 415 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:635:64: required from here 634 | versa_exercise, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 | af::versa_plain > >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:437:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 437 | check_true(__LINE__, a2.end() - a2.begin() == a2.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:438:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 438 | check_true(__LINE__, a3.end() - a3.begin() == a3.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:439:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 439 | check_true(__LINE__, a4.end() - a4.begin() == a4.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:440:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 440 | check_true(__LINE__, a5.end() - a5.begin() == a5.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:441:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 441 | check_true(__LINE__, a6.end() - a6.begin() == a6.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::versa_exercise::run_1() [with ArrayType = scitbx::af::versa; AltArrayType = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:415:12: required from ‘static void {anonymous}::versa_exercise::run() [with ArrayType = scitbx::af::versa; AltArrayType = scitbx::af::versa >]’ 415 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:637:58: required from here 636 | versa_exercise, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 | af::versa > >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:437:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 437 | check_true(__LINE__, a2.end() - a2.begin() == a2.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:438:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 438 | check_true(__LINE__, a3.end() - a3.begin() == a3.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:439:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 439 | check_true(__LINE__, a4.end() - a4.begin() == a4.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:440:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 440 | check_true(__LINE__, a5.end() - a5.begin() == a5.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:441:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 441 | check_true(__LINE__, a6.end() - a6.begin() == a6.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/small_plain_apply.h:15, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = int; long unsigned int N = 128]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:41:17: required from ‘static void {anonymous}::array_exercise::run_1() [with ArrayType = scitbx::af::small_plain]’ 41 | ArrayType a5(a4.begin(), a4.begin()); | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:28:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small_plain]’ 28 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_1.cpp:619:52: required from here 619 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_2.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_2 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_af_3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/regression_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=regression_test_ext.so.0 scitbx/array_family/boost_python/regression_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm -lboost_numpy313 /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_numpy313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. Create symlinks for: 'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' 'scitbx/array_family/boost_python/regression_test_ext.so.0'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' 'scitbx/array_family/boost_python/regression_test_ext.so'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' g++ -o scitbx/array_family/tst_af_4.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_4.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_accessors -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_accessors.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_3.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_5.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_5.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_4.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_af_5.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_1 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_mat3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_mat3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_af_5 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_5.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/array_family/tst_af_3 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_optional_copy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_optional_copy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_rectangular_full_packed.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/spotfinder_distltbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_distltbx_ext.so.0 spotfinder/core_toolbox/boost_python/distltbx_ext.o spotfinder/diffraction/geometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o lib/smtbx_structure_factors_direct_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_structure_factors_direct_ext.so.0 smtbx/structure_factors/direct/boost_python/ext.o smtbx/structure_factors/direct/boost_python/standard_xray.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_mat3.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_optional_copy.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/spotfinder_distltbx_ext.so.0.0.1' 'lib/spotfinder_distltbx_ext.so.0'->'lib/spotfinder_distltbx_ext.so.0.0.1' 'lib/spotfinder_distltbx_ext.so'->'lib/spotfinder_distltbx_ext.so.0.0.1' /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/accessors/rectangular_full_packed.h:3, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_ref_matrix_facet.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_ref_matrix_facet.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp: In function ‘int main()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:52:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 52 | for(int i=0; i'lib/smtbx_structure_factors_direct_ext.so.0.0.1' 'lib/smtbx_structure_factors_direct_ext.so'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1' g++ -o scitbx/array_family/tst_sym_mat3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_sym_mat3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_rectangular_full_packed -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_rectangular_full_packed.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_unsigned_float_arithmetic.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_ref_matrix_facet.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_sym_mat3.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/array_family/tiny_algebra.h:14, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_unsigned_float_arithmetic -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_unsigned_float_arithmetic.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_vec3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_vec3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_optional_copy -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_mat3 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/error/tst_error.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/error -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error/tst_error.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_ref_matrix_facet -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_ref_matrix_facet.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/fftpack/timing/fftpack_timer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/timing/fftpack_timer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/fftpack/timing/test0.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/timing/test0.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tst_vec3.cpp:2: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_sym_mat3 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_sym_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/lbfgs/sdrive_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable scitbx/lbfgs/sdrive_fem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_types.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/complex_to_complex.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/complex_to_complex_3d.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/timing/test0.cpp:3: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_types.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/complex_to_complex.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/timing/fftpack_timer.cpp:6: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/error/tst_error -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/error/tst_error.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ g++ -o lib/smtbx_refinement_least_squares_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_least_squares_ext.so.0 smtbx/refinement/boost_python/least_squares_ext.o smtbx/refinement/boost_python/weighting_schemes.o smtbx/refinement/boost_python/least_squares.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python313 -lm g++ -o scitbx/lbfgs/tst_lbfgs.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgs/tst_lbfgs.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o scitbx/array_family/tst_vec3 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_vec3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/lbfgsb/dev/driver1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver1.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem.hpp:10, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include/scitbx/lbfgs_fem.hpp:1, from scitbx/lbfgs/sdrive_fem.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ Create symlinks for: 'lib/smtbx_refinement_least_squares_ext.so.0.0.1' 'lib/smtbx_refinement_least_squares_ext.so.0'->'lib/smtbx_refinement_least_squares_ext.so.0.0.1' 'lib/smtbx_refinement_least_squares_ext.so'->'lib/smtbx_refinement_least_squares_ext.so.0.0.1' /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ g++ -o scitbx/lbfgsb/dev/driver2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver2.cpp In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver1.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/serialization/base_256.h:2, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/floating_point_epsilon.h:4, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:5: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver1.cpp:69:11: required from here 69 | setulb( | ~~~~~~^ 70 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver2.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:974:19: required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 974 | write_ref1(" X =", x); | ~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3786:15: required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 3786 | prn3lb(n,x,f,task,iprint,info,itfile, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3787 | iter,nfgv,nintol,nskip,nact,sbgnrm, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3788 | zero,nint,word,iback,stp,xstep,k, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3789 | cachyt,sbtime,lnscht); | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver1.cpp:69:11: required from here 69 | setulb( | ~~~~~~^ 70 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver2.cpp:102:19: required from here 102 | write_ref1(" ", x); | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver2.cpp:70:11: required from here 70 | setulb( | ~~~~~~^ 71 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ g++ -o scitbx/lbfgs/sdrive_fem -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/sdrive_fem.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/lbfgs/tst_lbfgs -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/tst_lbfgs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm g++ -o scitbx/lbfgsb/dev/driver3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/tests/tst.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/math/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/math/tests/tst.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:6, from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver3.cpp:1: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver3.cpp:82:19: required from here 82 | write_ref1(" ", wa.get1(j+1,n)); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/dev/driver3.cpp:72:11: required from here 72 | setulb( | ~~~~~~^ 73 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ g++ -o scitbx/fftpack/timing/fftpack_timer -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/fftpack_timer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lomptbx -lm g++ -o scitbx/fftpack/timing/test0 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/test0.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system -lomptbx -lm g++ -o scitbx/matrix/tests/tst_cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests/tst_cholesky.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/matrix/tests/tst_givens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests/tst_givens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/tests/tst -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/math/tests/tst.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_householder.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests/tst_householder.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lbfgsb/dev/driver2 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_timer -lboost_chrono -lm g++ -o scitbx/lbfgsb/dev/driver1 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_timer -lboost_chrono -lm g++ -o scitbx/matrix/tests/tst_svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/matrix/tests/tst_svd.cpp g++ -o scitbx/serialization/tst_base_256.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/serialization -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/serialization /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/serialization/tst_base_256.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/matrix/tests/tst_givens -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_givens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/lbfgsb/dev/driver3 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_timer -lboost_chrono -lm g++ -o scitbx/sparse/tests/tst_sparse.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Iscitbx/sparse/tests -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/tests /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/scitbx/sparse/tests/tst_sparse.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/spotfinder_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_array_family_flex_ext.so.0 spotfinder/array_family/flex_ext.o spotfinder/array_family/flex_distl_spot.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python313 -lm g++ -o scitbx/serialization/tst_base_256 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/serialization/tst_base_256.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm /usr/lib/aarch64-linux-gnu/libboost_thread.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_system.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libboost_python313.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/tests/tst_reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/spotfinder_array_family_flex_ext.so.0.0.1' 'lib/spotfinder_array_family_flex_ext.so.0'->'lib/spotfinder_array_family_flex_ext.so.0.0.1' 'lib/spotfinder_array_family_flex_ext.so'->'lib/spotfinder_array_family_flex_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/tests/tst_special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_/include -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/smtbx/refinement/constraints/tests/tst_special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/matrix/tests/tst_svd -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_svd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_cholesky -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_cholesky.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_householder -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_householder.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/sparse/tests/tst_sparse -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/sparse/tests/tst_sparse.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_special_position -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_special_position.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_reparametrisation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_af_4 -rdynamic -Wl,-z,relro -L/usr/lib/aarch64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_4.o -L/usr/lib -L/usr/lib64 -L/usr/lib/aarch64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -Llib -L/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/lib -lm scons: done building targets. usr+sys time: 27.27 seconds wall clock time: 16 minutes 48.38 seconds (1008.38 seconds total) iconv -f ISO-8859-1 -t UTF-8 cctbx/eltbx/covalent_radii.h > covalent_radii.h mv covalent_radii.h cctbx/eltbx/covalent_radii.h # cp all extensions into the python build directory # special case for an extension used during test dh_auto_build -- -s custom --build-args="cp -f {build_dir}_/lib/*_ext.so {build_dir}_/scitbx/array_family/boost_python/regression_test_ext.so {build_dir}" pybuild --build -i python{version} -p 3.13 -s custom --build-args="cp -f {build_dir}_/lib/*_ext.so {build_dir}_/scitbx/array_family/boost_python/regression_test_ext.so {build_dir}" I: pybuild base:311: cp -f '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_/lib/*_ext.so '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_/scitbx/array_family/boost_python/regression_test_ext.so '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build' # cp the dxtbx pybind11 extension at the right place. dh_auto_build -- -s custom --build-args="cp -f {build_dir}_/lib/dxtbx_flumpy.so {build_dir}" pybuild --build -i python{version} -p 3.13 -s custom --build-args="cp -f {build_dir}_/lib/dxtbx_flumpy.so {build_dir}" I: pybuild base:311: cp -f '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_/lib/dxtbx_flumpy.so '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build' make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' # DOES NOT WORK, source code must be modified in order to find the expected # /usr/share/cctbx libtbx_env file during the build process make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild rm -f -- debian/libcctbx0.substvars debian/libcctbx-dev.substvars debian/python3-cctbx.substvars rm -fr -- debian/.debhelper/generated/libcctbx0/ debian/libcctbx0/ debian/tmp/ debian/.debhelper/generated/libcctbx-dev/ debian/libcctbx-dev/ debian/.debhelper/generated/python3-cctbx/ debian/python3-cctbx/ debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' # install the cctbx python modules dh_auto_install install -m0755 -d /build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp pybuild --install -i python{version} -p 3.13 --dest-dir=/build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp I: pybuild base:311: /usr/bin/python3 setup.py install --root '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx copying annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators running install_lib creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_wigner_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_rational_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/geostd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/phi_psi_2_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_lrv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_scattering_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_and_dm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/proq2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/tst_rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_viewer_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_util_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_maximum_clique_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_alignment_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/translation_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_optimise_amplitudes_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_clash_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_secondary_structure_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_cartesian_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_wavelengths_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/minpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/simplex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/spe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/farey.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/smoothing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatADSCSMVCetaD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatESSNMX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/py.typed -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/error.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_random_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_orientation_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_nexus_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_dmtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_python_streambuf_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/log.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgs_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pymol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ramachandran_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_covariance_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_decompose_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_french_wilson_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/development.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_disorder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_direction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_same_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_shared_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_math_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_symmetry_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_ccp4_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_translation_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_dxtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_set_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_shared_types_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_reference_coordinate_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_metric_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_optional_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_reduce_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_dssp_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_neutron_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_mtz_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_dynamics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_diffraction_fastbragg_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_tiny_pse_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_distltbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_merging_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_r3_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_dsn6_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx creating /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/frames.py to frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_geo_file_parsing.py to tst_geo_file_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/geo_file_parsing.py to geo_file_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/geostd_utils.py to geostd_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/server.py to server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/grow_density.py to grow_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absences.py to absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/msa.py to msa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/lattice.py to lattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/topology.py to topology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/asa.py to asa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/clash.py to clash.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tools.py to tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/map_tools.py to map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/phi_psi_2_data.py to phi_psi_2_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/waters.py to waters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/identify.py to identify.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/environment.py to environment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/build.py to build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/halides.py to halides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_2.py to tst_mmtbx_refinement_wrappers_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_arginine_geometry.py to tst_arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ribbons.py to tst_ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_lrv.py to tst_lrv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_table.py to tst_scattering_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_and_dm.py to tst_fmodel_and_dm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/arrays.py to arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suites.py to suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/proq2.py to proq2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/f000.py to f000.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls.py to tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/super.py to super.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maps.py to maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/angle.py to angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fetch.py to fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/refinement.py to refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/targets.py to targets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights.py to weights.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/data.py to data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/orca.py to orca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/group.py to group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/output.py to output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/find.py to find.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_4.py to tst_add_hydrogen_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_6.py to tst_add_hydrogen_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_7.py to tst_add_hydrogen_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_1.py to tst_add_hydrogen_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_5.py to tst_add_hydrogen_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip.py to xmanip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_entry_request.py to tst_rcsb_entry_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_entry_request.py to rcsb_entry_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/clashes.py to clashes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/statistics.py to statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fem.py to fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/kick.py to kick.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_read.py to tst_read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tokenization.py to tokenization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/cout.py to cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout.py to tst_cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/intrinsics.py to intrinsics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/read.py to read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/cout.py to cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/read.py to read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/split.py to split.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/equivalence.py to equivalence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/watch_file.py to watch_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adptbx.py to adptbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/math_module.py to math_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/shelx.py to shelx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/replay.py to replay.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/emma.py to emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/display.py to display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_examples.py to run_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/github.py to github.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/statistics.py to statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/formula.py to formula.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/henke.py to henke.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/qscore.py to qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/location_part.py to location_part.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure.py to structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/dev.py to dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/multipolar.py to multipolar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/translation_search.py to translation_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mem.py to mem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/box.py to box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/run.py to run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/browser.py to browser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/monitor.py to monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/b_plot.py to b_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/app.py to app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/icons.py to icons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/process_control.py to process_control.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon.py to polygon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/listeditor.py to listeditor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/info_panels.py to info_panels.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/path.py to path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/blast.py to blast.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/windows.py to windows.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/layout.py to layout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/tables.py to tables.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minpack.py to minpack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/optional.py to optional.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/svd.py to svd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/householder.py to householder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/single.py to single.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/vector.py to vector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/set.py to set.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/simplex.py to simplex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minimizers.py to minimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/shared.py to shared.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/misc.py to misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/fftpack.py to fftpack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/spe.py to spe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/farey.py to farey.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/besselk.py to besselk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/clustering.py to clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/distributions.py to distributions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/functions.py to functions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/smoothing.py to smoothing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/imageset.py to imageset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/image.py to image.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Format.py to Format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nexus.py to nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatADSCSMVCetaD.py to FormatADSCSMVCetaD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatESSNMX.py to FormatESSNMX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Registry.py to Registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/datablock.py to datablock.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/flumpy.py to flumpy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/overload.py to overload.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/load.py to load.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/filename.py to filename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/xds.py to xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache.py to filecache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector.py to detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan.py to scan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/compare.py to compare.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/profile.py to profile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/beam.py to beam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/crystal.py to crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/time.py to time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/option_parser.py to option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/str_utils.py to str_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/wingide.py to wingide.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/experimental.py to experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/parser.py to parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/interface.py to interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/env_config.py to env_config.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/introspection.py to introspection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/math_utils.py to math_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/objgraph.py to objgraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/progress.py to progress.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/dlite.py to dlite.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/result.py to result.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/binary_search.py to binary_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/load_env.py to load_env.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_run.py to easy_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/log.py to log.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyplot.py to pyplot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/timers.py to timers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/containers.py to containers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/callbacks.py to callbacks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyframe.py to pyframe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/complex_math.py to complex_math.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_path.py to tst_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/citations.py to citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/console_utils.py to console_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cluster.py to cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/help.py to help.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install.py to install.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/scons.py to scons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_version.py to tst_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cli.py to cli.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/result.py to result.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/simplexml.py to simplexml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/path.py to path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_template.py to program_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/smart_open.py to smart_open.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/table_utils.py to table_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/configure.py to configure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/option_parser.py to option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/table_one.py to table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phases.py to phases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/format.py to format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pymol.py to pymol.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_tools.py to map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ranges.py to ranges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mrc_io.py to tst_mrc_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_cells.py to tst_pdb_cif_cells.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_2.py to tst_map_manager_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/merge.py to merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/writer.py to writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/noir.py to noir.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/edf.py to edf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/mar.py to mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/npy.py to npy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/common.py to common.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/download.py to download.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/records.py to records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/models.py to models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders.py to builders.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_manager.py to map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/correction.py to correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xparm.py to xparm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/builders.py to builders.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/citations.py to citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/validation.py to validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/poscar.py to poscar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/wildcard.py to wildcard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/logfiles.py to logfiles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/file_reader.py to file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/emma.py to emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_plots.py to data_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/symmetry.py to symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/constants.py to constants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/frame.py to frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/integration.py to integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/display.py to display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/controls.py to controls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/processing.py to processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/preferences.py to preferences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/scope.py to scope.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/index.py to index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/solver.py to solver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/create.py to create.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/index.py to index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/trial.py to trial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/tag.py to tag.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/run.py to run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/stats.py to stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/task.py to task.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/job.py to job.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/weather.py to weather.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/drift.py to drift.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/split_detector.py to split_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/mp.py to mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/isoform.py to isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/simulate.py to simulate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/absorption.py to absorption.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/refine.py to refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/application.py to application.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/worker.py to worker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-313.pyc /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:62: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:378: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:420: SyntaxWarning: invalid escape sequence '\m' byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/api.py to api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster.py to cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/striping.py to striping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/metrology.py to metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/weather.py to weather.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/riso.py to riso.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/drift.py to drift.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark1.py to mark1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark10.py to mark10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark0.py to mark0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark3.py to mark3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/graph.py to graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/components.py to components.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/exception.py to exception.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache.py to apache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/development.py to development.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/masks.py to masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/refine.py to refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_disorder.py to tst_disorder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_occupancies.py to tst_occupancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_direction.py to tst_direction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_rigid.py to tst_rigid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_same_group.py to tst_same_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/images.py to images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl.py to gl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/fonts.py to fonts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/quadrics.py to quadrics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/glu.py to glu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/python.py to python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/device.py to device.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/run_tests.py to run_tests.cpython-313.pyc running install_egg_info running egg_info creating cctbx.egg-info writing cctbx.egg-info/PKG-INFO writing dependency_links to cctbx.egg-info/dependency_links.txt writing requirements to cctbx.egg-info/requires.txt writing top-level names to cctbx.egg-info/top_level.txt writing manifest file 'cctbx.egg-info/SOURCES.txt' reading manifest file 'cctbx.egg-info/SOURCES.txt' adding license file 'LICENSE.txt' writing manifest file 'cctbx.egg-info/SOURCES.txt' Copying cctbx.egg-info to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx-2023.12.egg-info Skipping SOURCES.txt running install_scripts # install the dxtbx python modules dh_auto_install --sourcedirectory=dxtbx install -m0755 -d /build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp pybuild --install -i python{version} -p 3.13 --dir dxtbx --dest-dir=/build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp I: pybuild base:311: /usr/bin/python3 setup.py install --root '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp' /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() Found 21 dxtbx dispatchers Found 141 Format classes running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_wigner_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_rational_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/geo_file_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/geostd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/phi_psi_2_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_lrv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_scattering_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_fmodel_and_dm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/proq2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ligand_restraints_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_add_hydrogen_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/tst_rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/rcsb_entry_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/xtrapol8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_viewer_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_util_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_maximum_clique_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_alignment_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/translation_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_optimise_amplitudes_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_clash_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_secondary_structure_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/polygon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_cartesian_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_wavelengths_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/minpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/set.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/simplex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/minimizers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/spe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/farey.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/smoothing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatADSCSMVCetaD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatESSNMX.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/py.typed -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/error.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_random_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_orientation_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/qttbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_nexus_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_dmtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_python_streambuf_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/log.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/path.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ncs_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fable_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lbfgs_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/table_one.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/format.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pymol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/data_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_ramachandran_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_covariance_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/util/mp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_tls_decompose_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_french_wilson_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/exception.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/map.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/development.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_disorder.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_occupancies.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_direction.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_rigid.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_same_group.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_suffixtree_shared_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_math_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_symmetry_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_ccp4_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_translation_search_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_dxtbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_stl_set_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_geometry_shared_types_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_reference_coordinate_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/util.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/images.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_metric_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_optional_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_reduce_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_dssp_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_neutron_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_mtz_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_dynamics_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_diffraction_fastbragg_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_eltbx_tiny_pse_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_distltbx_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/annlib_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/cctbx_merging_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/scitbx_r3_utils_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/iotbx_dsn6_map_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/simtbx/run_tests.py -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx copying /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/omptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/frames.py to frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_geo_file_parsing.py to tst_geo_file_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/geo_file_parsing.py to geo_file_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/geostd_utils.py to geostd_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/server.py to server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/grow_density.py to grow_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absences.py to absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/msa.py to msa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/lattice.py to lattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/topology.py to topology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/asa.py to asa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/clash.py to clash.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tools.py to tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/tls/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/map_tools.py to map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/phi_psi_2_data.py to phi_psi_2_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/waters.py to waters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/identify.py to identify.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/environment.py to environment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/build.py to build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/halides.py to halides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_2.py to tst_mmtbx_refinement_wrappers_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_arginine_geometry.py to tst_arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ribbons.py to tst_ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_lrv.py to tst_lrv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_scattering_table.py to tst_scattering_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_fmodel_and_dm.py to tst_fmodel_and_dm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/arrays.py to arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suites.py to suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/proq2.py to proq2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/f000.py to f000.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls.py to tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/super.py to super.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/maps.py to maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/command_line/angle.py to angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mp_validate_bonds.py to mp_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ligand_restraints_validation.py to ligand_restraints_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/fetch.py to fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/den/refinement.py to refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/targets.py to targets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/weights.py to weights.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/data.py to data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/orca.py to orca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/group.py to group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/output.py to output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/find.py to find.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_4.py to tst_add_hydrogen_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_6.py to tst_add_hydrogen_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_7.py to tst_add_hydrogen_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_1.py to tst_add_hydrogen_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_5.py to tst_add_hydrogen_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/xmanip.py to xmanip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_entry_request.py to tst_rcsb_entry_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/rcsb_entry_request.py to rcsb_entry_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/clashes.py to clashes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/statistics.py to statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/model/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/fem.py to fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/polder.py to polder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/xtrapol8.py to xtrapol8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/kick.py to kick.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_read.py to tst_read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tokenization.py to tokenization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/cout.py to cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_cout.py to tst_cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/intrinsics.py to intrinsics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/read.py to read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/cout.py to cout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/read.py to read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/split.py to split.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/equivalence.py to equivalence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fable/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/watch_file.py to watch_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adptbx.py to adptbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/math_module.py to math_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/shelx.py to shelx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/replay.py to replay.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/emma.py to emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/display.py to display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_examples.py to run_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/github.py to github.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/statistics.py to statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/formula.py to formula.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/henke.py to henke.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/qscore.py to qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/location_part.py to location_part.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure.py to structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/dev.py to dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/omz/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/multipolar.py to multipolar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/translation_search.py to translation_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mem.py to mem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/box.py to box.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/mask.py to mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/run.py to run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/browser.py to browser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/monitor.py to monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/b_plot.py to b_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/app.py to app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/icons.py to icons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/process_control.py to process_control.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/polygon.py to polygon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/listeditor.py to listeditor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/info_panels.py to info_panels.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/path.py to path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/blast.py to blast.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/windows.py to windows.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/layout.py to layout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/tables.py to tables.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/wxtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minpack.py to minpack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/optional.py to optional.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/random/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/svd.py to svd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/linalg/householder.py to householder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/single.py to single.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/vector.py to vector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/set.py to set.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/simplex.py to simplex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/minimizers.py to minimizers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/shared.py to shared.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/misc.py to misc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/source_generators/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/fftpack.py to fftpack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/spe.py to spe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/farey.py to farey.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/besselk.py to besselk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/clustering.py to clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/distributions.py to distributions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/superpose.py to superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/functions.py to functions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/smoothing.py to smoothing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fast_linalg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/imageset.py to imageset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/data/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/image.py to image.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Format.py to Format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nexus.py to nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatADSCSMVCetaD.py to FormatADSCSMVCetaD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatESSNMX.py to FormatESSNMX.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/Registry.py to Registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/datablock.py to datablock.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/flumpy.py to flumpy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/overload.py to overload.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/load.py to load.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/filename.py to filename.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/serialize/xds.py to xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/filecache.py to filecache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector.py to detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan.py to scan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/compare.py to compare.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/profile.py to profile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/beam.py to beam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx/model/crystal.py to crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/qttbx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/time.py to time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/sphinx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/bundle/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/option_parser.py to option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/str_utils.py to str_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/wingide.py to wingide.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/experimental.py to experimental.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/command_line.py to command_line.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/parser.py to parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/phil/interface.py to interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/version.py to version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/env_config.py to env_config.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/introspection.py to introspection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/math_utils.py to math_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/objgraph.py to objgraph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/progress.py to progress.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/dlite.py to dlite.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/result.py to result.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/binary_search.py to binary_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/load_env.py to load_env.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_run.py to easy_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/log.py to log.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyplot.py to pyplot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/timers.py to timers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/development/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/containers.py to containers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/callbacks.py to callbacks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/pyframe.py to pyframe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/complex_math.py to complex_math.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_path.py to tst_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/citations.py to citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/console_utils.py to console_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cluster.py to cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/help.py to help.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install.py to install.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/scons.py to scons.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_version.py to tst_version.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/cli.py to cli.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/result.py to result.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/simplexml.py to simplexml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/path.py to path.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/program_template.py to program_template.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/smart_open.py to smart_open.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/table_utils.py to table_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/configure.py to configure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/option_parser.py to option_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/table_one.py to table_one.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phases.py to phases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/format.py to format.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pymol.py to pymol.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_tools.py to map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ranges.py to ranges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mrc_io.py to tst_mrc_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_cells.py to tst_pdb_cif_cells.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_2.py to tst_map_manager_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/scalepack/merge.py to merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/ext.py to ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/writer.py to writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/noir.py to noir.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/edf.py to edf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/mar.py to mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/detectors/npy.py to npy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/common.py to common.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_manager/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/download.py to download.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/records.py to records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/models.py to models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/builders.py to builders.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_manager.py to map_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/correction.py to correction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/xds/xparm.py to xparm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraints.py to restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/model.py to model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/errors.py to errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/builders.py to builders.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/citations.py to citations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/validation.py to validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/poscar.py to poscar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/wildcard.py to wildcard.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/logfiles.py to logfiles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/file_reader.py to file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/emma.py to emma.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/data_plots.py to data_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/iotbx/symmetry.py to symmetry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/fftw3tbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simulation/constants.py to constants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/frame.py to frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/integration.py to integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/display.py to display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/controls.py to controls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/processing.py to processing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/preferences.py to preferences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/scope.py to scope.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/index.py to index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/solver.py to solver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/create.py to create.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/index.py to index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/apps/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/rstbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/trial.py to trial.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/tag.py to tag.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/run.py to run.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/stats.py to stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/task.py to task.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/db/job.py to job.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/weather.py to weather.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/drift.py to drift.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/split_detector.py to split_detector.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/util/mp.py to mp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/isoform.py to isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/xpp/simulate.py to simulate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/absorption.py to absorption.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/refine.py to refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/application.py to application.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/worker.py to worker.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-313.pyc /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:62: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:378: SyntaxWarning: invalid escape sequence '\m' /usr/lib/python3.13/dist-packages/xfel/merging/application/filter/reflection_filter.py:420: SyntaxWarning: invalid escape sequence '\m' byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/api.py to api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/cluster.py to cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/striping.py to striping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/metrology.py to metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/weather.py to weather.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/riso.py to riso.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/drift.py to drift.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/preference.py to preference.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark1.py to mark1.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark10.py to mark10.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark0.py to mark0.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/mark3.py to mark3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/pal/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/graph.py to graph.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/xfel/graph_proc/components.py to components.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/exception.py to exception.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/flex.py to flex.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache.py to apache.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/spotfinder/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/map.py to map.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/stl/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/development.py to development.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/masks.py to masks.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/refine.py to refine.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_disorder.py to tst_disorder.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_occupancies.py to tst_occupancies.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_direction.py to tst_direction.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_rigid.py to tst_rigid.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_same_group.py to tst_same_group.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/masks/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/smtbx/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/util.py to util.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/images.py to images.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/gl.py to gl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/fonts.py to fonts.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/quadrics.py to quadrics.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/glu.py to glu.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/python.py to python.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/device.py to device.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-313.pyc byte-compiling /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/simtbx/run_tests.py to run_tests.cpython-313.pyc running install_egg_info running egg_info writing src/dxtbx.egg-info/PKG-INFO writing dependency_links to src/dxtbx.egg-info/dependency_links.txt writing entry points to src/dxtbx.egg-info/entry_points.txt writing top-level names to src/dxtbx.egg-info/top_level.txt reading manifest file 'src/dxtbx.egg-info/SOURCES.txt' adding license file 'LICENSE.txt' adding license file 'AUTHORS' writing manifest file 'src/dxtbx.egg-info/SOURCES.txt' Copying src/dxtbx.egg-info to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/python3.13/dist-packages/dxtbx-3.23.0.egg-info Skipping SOURCES.txt running install_scripts Installing cxi.image2pickle script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing cxi.image_average script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dev.dxtbx.debug_memory script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dev.dxtbx.read_sequence script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.any2nexus script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.depends_on script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.detector_superpose script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.display_parallax_correction script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.dlsnxs2cbf script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.image2pickle script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.image_average script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.install_format script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.overload script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.plot_detector_models script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.print_header script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.print_matching_images script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.radial_average script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.saturation script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.show_mask_info script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.show_matching_formats script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin Installing dxtbx.show_registry script to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/bin # specific installation for the cctbx build directory dh_auto_install -- -s custom --install-args="debian/install-cctbx.sh -- --pyver={version} --srcdir=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 --builddir={build_dir}_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx'" install -m0755 -d /build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp pybuild --install -i python{version} -p 3.13 -s custom --install-args="debian/install-cctbx.sh -- --pyver={version} --srcdir=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 --builddir={build_dir}_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx'" --dest-dir=/build/reproducible-path/cctbx-2025.2\+ds2\+\~3.23.0\+ds1/debian/tmp I: pybuild base:311: debian/install-cctbx.sh -- --pyver=3.13 --srcdir=/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 --builddir='/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build'_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx' debian/install-cctbx.sh: line 7: 0: command not found --pyver '3.13' --srcdir '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' --builddir '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_' --modules 'annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx' -- Intalling CCTBX into a FHS system Modules: annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx From the source /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 build /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_ To the FHS : pyver 3.13 bindir /usr/bin incdir /usr/include pkglibdir /usr/lib/cctbx/python3.13 libdir /usr/lib/aarch64-linux-gnu pythondir /usr/lib/python3.13/dist-packages Copying libtbx_env from /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/.pybuild/cpython3_3.13/build_ to /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13 {'_dispatcher_include_at_start': [], '_dispatcher_include_before_command': [], '_dispatcher_precall_commands': None, '_dispatcher_registry': {relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.display_parallax_correction"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/display_parallax_correction.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.print_matching_images"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/print_matching_images.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.show_registry"): 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relocatable="bin/dxtbx.show_matching_formats"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/show_matching_formats.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dev.dxtbx.read_sequence"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/read_sequence.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.image_average"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/image_average.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/cxi.image_average"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/image_average.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.plot_detector_models"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/plot_detector_models.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dev.dxtbx.debug_memory"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/debug_memory.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.saturation"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/saturation.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.print_header"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/print_header.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.image2pickle"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/image2pickle.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/cxi.image2pickle"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx/src/dxtbx/command_line/image2pickle.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/boost.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/omptbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/cma_es.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/fable.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/scitbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/annlib.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/cbflib.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/ccp4io.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/cctbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/crys3d.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/smtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/iotbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/dxtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/gltbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/mmtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/spotfinder.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/rstbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/serialtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/wxtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/boost.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/omptbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/cma_es.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/fable.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/scitbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/annlib.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/cbflib.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/ccp4io.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/cctbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", 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relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.remote_processing"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/remote_processing.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.pdflatex"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/pdflatex.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.add_from_future_import_division"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/add_from_future_import_division.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.list_source_files_sorted_by_size"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/list_source_files_sorted_by_size.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.exec"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/exec.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_host_and_user"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_host_and_user.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_number_of_processors"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_number_of_processors.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_but_no_repr"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_but_no_repr.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_lib_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_lib_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.sge_qstat_counts"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/sge_qstat_counts.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_tests"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_tests.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_env"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_env.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.easy_qsub"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/easy_qsub.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.sh"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/sh.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.seconds_since_the_epoch"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/seconds_since_the_epoch.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.sge_available_slots"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/sge_available_slots.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.tcsh"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/tcsh.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.check_libcpp"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/check_libcpp.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.assert_stdin_ends_with"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/assert_stdin_ends_with.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.dtrace"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/dtrace.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.py_compile_all"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/py_compile_all.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_all_on_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_all_on_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.show_full_command_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/show_full_command_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.valgrind"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/valgrind.sh"), relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin/libtbx.resource_monitor_plot"): relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/resource_monitor_plot.py")}, 'bin_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="bin"), 'boost_version': 108300, 'build_options': , 'build_path': absolute_path("/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13"), 'command_line_redirections': {}, 'command_version_suffix': None, 'dispatcher_name': None, 'exe_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="exe"), 'explicitly_requested_modules': {'annlib', 'annlib_adaptbx', 'boost_adaptbx', 'cbflib_adaptbx', 'ccp4io', 'ccp4io_adaptbx', 'cctbx', 'cma_es', 'crys3d', 'dxtbx', 'fable', 'gltbx', 'iotbx', 'libtbx', 'mmtbx', 'omptbx', 'rstbx', 'scitbx', 'serialtbx', 'smtbx', 'spotfinder', 'tbxx', 'wxtbx'}, 'full_testing': False, 'include_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="include"), 'installed': False, 'installed_modules': [], 'installed_order': [], 'lib_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="lib"), 'missing_for_build': set(), 'missing_for_use': set(), 'missing_optional': {'probe', 'cbflib', 'docutils', 'king', 'reduce'}, 'module_dict': {'annlib': , 'boost': , 'cbflib': , 'ccp4io': , 'cctbx': , 'chiltbx': , 'cma_es': , 'crys3d': , 'dxtbx': , 'fable': , 'gltbx': , 'iotbx': , 'libtbx': , 'mmtbx': , 'omptbx': , 'rstbx': , 'scitbx': , 'serialtbx': , 'smtbx': , 'spotfinder': , 'tbxx': , 'ucif': , 'wxtbx': }, 'module_dist_paths': {'annlib': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../annlib"), 'annlib_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../annlib_adaptbx"), 'boost': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../boost"), 'boost_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../boost_adaptbx"), 'cbflib_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../cbflib_adaptbx"), 'ccp4io': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../ccp4io"), 'ccp4io_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../ccp4io_adaptbx"), 'cctbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../cctbx"), 'chiltbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../chiltbx"), 'cma_es': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../cma_es"), 'crys3d': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../crys3d"), 'dxtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../dxtbx"), 'fable': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../fable"), 'gltbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../gltbx"), 'iotbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../iotbx"), 'libtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx"), 'mmtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../mmtbx"), 'omptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../omptbx"), 'rstbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../rstbx"), 'scitbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../scitbx"), 'serialtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../serialtbx"), 'smtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../smtbx"), 'spotfinder': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../spotfinder"), 'tbxx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../tbxx"), 'ucif': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../ucif"), 'wxtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../wxtbx")}, 'module_list': [, , , , , , , , , , , , , , , , , , , , , , ], 'no_bin_python': False, 'path_utility': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="../../../libtbx/command_line/path_utility.py"), 'python_exe': relocatable_path(anchor="/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1/debian/tmp/usr/lib/cctbx/python3.13", relocatable="/usr/bin/python3.13"), 'python_version_major_minor': (3, 13), 'pythonpath': 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relocatable_path(anchor="/usr", relocatable=".")} building file list ... done ./ boost_adaptbx/ boost_adaptbx/tests/ boost_adaptbx/tests/tst_optional_copy iotbx/ iotbx/pdb/ iotbx/pdb/hybrid_36_fem scitbx/ scitbx/array_family/ scitbx/array_family/tst_accessors scitbx/array_family/tst_af_1 scitbx/array_family/tst_af_2 scitbx/array_family/tst_af_3 scitbx/array_family/tst_af_4 scitbx/array_family/tst_af_5 scitbx/array_family/tst_mat3 scitbx/array_family/tst_optional_copy scitbx/array_family/tst_rectangular_full_packed scitbx/array_family/tst_ref_matrix_facet scitbx/array_family/tst_sym_mat3 scitbx/array_family/tst_unsigned_float_arithmetic scitbx/array_family/tst_vec3 scitbx/error/ scitbx/error/tst_error scitbx/lbfgs/ scitbx/lbfgs/tst_lbfgs scitbx/math/ scitbx/math/tests/ scitbx/math/tests/tst scitbx/matrix/ scitbx/matrix/tests/ scitbx/matrix/tests/tst_cholesky scitbx/matrix/tests/tst_givens scitbx/matrix/tests/tst_householder scitbx/matrix/tests/tst_svd scitbx/serialization/ scitbx/serialization/tst_base_256 smtbx/ smtbx/refinement/ smtbx/refinement/constraints/ smtbx/refinement/constraints/tests/ smtbx/refinement/constraints/tests/tst_geometrical_hydrogens smtbx/refinement/constraints/tests/tst_reparametrisation smtbx/refinement/constraints/tests/tst_special_position sent 16,524,096 bytes received 568 bytes 33,049,328.00 bytes/sec total size is 16,512,448 speedup is 1.00 building file list ... done ./ libann_adaptor.so -> libann_adaptor.so.0.0.1 libann_adaptor.so.0 -> libann_adaptor.so.0.0.1 libann_adaptor.so.0.0.1 libasymmetric_map.so -> libasymmetric_map.so.0.0.1 libasymmetric_map.so.0 -> libasymmetric_map.so.0.0.1 libasymmetric_map.so.0.0.1 libcbf-private.so -> libcbf-private.so.0.0.1 libcbf-private.so.0 -> libcbf-private.so.0.0.1 libcbf-private.so.0.0.1 libccp4io.so -> libccp4io.so.0.0.1 libccp4io.so.0 -> libccp4io.so.0.0.1 libccp4io.so.0.0.1 libcctbx.so -> libcctbx.so.0.0.1 libcctbx.so.0 -> libcctbx.so.0.0.1 libcctbx.so.0.0.1 libcctbx_sgtbx_asu.so -> libcctbx_sgtbx_asu.so.0.0.1 libcctbx_sgtbx_asu.so.0 -> libcctbx_sgtbx_asu.so.0.0.1 libcctbx_sgtbx_asu.so.0.0.1 libdxtbxspotfinder.so -> libdxtbxspotfinder.so.0.0.1 libdxtbxspotfinder.so.0 -> libdxtbxspotfinder.so.0.0.1 libdxtbxspotfinder.so.0.0.1 libiotbx_mtz.so -> libiotbx_mtz.so.0.0.1 libiotbx_mtz.so.0 -> libiotbx_mtz.so.0.0.1 libiotbx_mtz.so.0.0.1 libiotbx_pdb.so -> libiotbx_pdb.so.0.0.1 libiotbx_pdb.so.0 -> libiotbx_pdb.so.0.0.1 libiotbx_pdb.so.0.0.1 libiotbx_xplor.so -> libiotbx_xplor.so.0.0.1 libiotbx_xplor.so.0 -> libiotbx_xplor.so.0.0.1 libiotbx_xplor.so.0.0.1 libmmtbx_masks.so -> libmmtbx_masks.so.0.0.1 libmmtbx_masks.so.0 -> libmmtbx_masks.so.0.0.1 libmmtbx_masks.so.0.0.1 libmmtbx_tls.so -> libmmtbx_tls.so.0.0.1 libmmtbx_tls.so.0 -> libmmtbx_tls.so.0.0.1 libmmtbx_tls.so.0.0.1 libomptbx.so -> libomptbx.so.0.0.1 libomptbx.so.0 -> libomptbx.so.0.0.1 libomptbx.so.0.0.1 librstbx.so -> librstbx.so.0.0.1 librstbx.so.0 -> librstbx.so.0.0.1 librstbx.so.0.0.1 libscitbx_boost_python.so -> libscitbx_boost_python.so.0.0.1 libscitbx_boost_python.so.0 -> libscitbx_boost_python.so.0.0.1 libscitbx_boost_python.so.0.0.1 libscitbx_minpack.so -> libscitbx_minpack.so.0.0.1 libscitbx_minpack.so.0 -> libscitbx_minpack.so.0.0.1 libscitbx_minpack.so.0.0.1 libscitbx_slatec.so -> libscitbx_slatec.so.0.0.1 libscitbx_slatec.so.0 -> libscitbx_slatec.so.0.0.1 libscitbx_slatec.so.0.0.1 libsmtbx_refinement_constraints.so -> libsmtbx_refinement_constraints.so.0.0.1 libsmtbx_refinement_constraints.so.0 -> libsmtbx_refinement_constraints.so.0.0.1 libsmtbx_refinement_constraints.so.0.0.1 libspotfinder.so -> libspotfinder.so.0.0.1 libspotfinder.so.0 -> libspotfinder.so.0.0.1 libspotfinder.so.0.0.1 sent 56,669,190 bytes received 494 bytes 113,339,368.00 bytes/sec total size is 56,652,474 speedup is 1.00 building file list ... done annlib_adaptbx/ annlib_adaptbx/ann_adaptor.h sent 2,228 bytes received 38 bytes 4,532.00 bytes/sec total size is 2,068 speedup is 0.91 building file list ... done boost_adaptbx/ boost_adaptbx/boost_range_python.hpp boost_adaptbx/convertible.h boost_adaptbx/exporting.hpp boost_adaptbx/floating_point_exceptions.h boost_adaptbx/hash.h boost_adaptbx/iterator_range.h boost_adaptbx/optional_conversions.h boost_adaptbx/precompiled.h boost_adaptbx/python_streambuf.h boost_adaptbx/std_pair_conversion.h boost_adaptbx/std_pair_fwd.h boost_adaptbx/swig_arg.hpp boost_adaptbx/tuple_conversion.h boost_adaptbx/graph/ boost_adaptbx/graph/graph_export_adaptor.hpp boost_adaptbx/graph/graph_type.hpp boost_adaptbx/graph/maximum_clique_greedy.hpp boost_adaptbx/graph/maximum_clique_rascal.hpp boost_adaptbx/graph/vertex_map.hpp boost_adaptbx/tests/ boost_adaptbx/tests/tst_optional_copy.h sent 73,893 bytes received 386 bytes 148,558.00 bytes/sec total size is 72,301 speedup is 0.97 building file list ... done cbflib_adaptbx/ cbflib_adaptbx/detectors/ cbflib_adaptbx/detectors/basic.h cbflib_adaptbx/detectors/buffer_based_service.h cbflib_adaptbx/detectors/cbf_adaptor.h cbflib_adaptbx/detectors/cbf_byte_offset_optimized.h cbflib_adaptbx/detectors/mar_adaptor.h cbflib_adaptbx/detectors/boost_python/ cbflib_adaptbx/detectors/boost_python/cbf_binary_adaptor.h cbflib_adaptbx/detectors/boost_python/general_cbf_write.h sent 22,297 bytes received 158 bytes 14,970.00 bytes/sec total size is 21,627 speedup is 0.96 building file list ... done ccp4io_adaptbx/ ccp4io_adaptbx/ccp4_ccplib_fem.hpp ccp4io_adaptbx/ccp4_diskio_fem.hpp ccp4io_adaptbx/ccp4_fftlib_fem.hpp ccp4io_adaptbx/ccp4_library_fem.hpp ccp4io_adaptbx/ccp4_maplib_fem.hpp ccp4io_adaptbx/ccp4_mtzlib_fem.hpp ccp4io_adaptbx/ccp4_other_fem.hpp ccp4io_adaptbx/ccp4_parser_f.h ccp4io_adaptbx/ccp4_parser_fem.hpp ccp4io_adaptbx/ccp4_symlib_fem.hpp ccp4io_adaptbx/cmaplib_f.h ccp4io_adaptbx/cmtzlib_f.h ccp4io_adaptbx/csymlib_f.h ccp4io_adaptbx/library_f.h ccp4io_adaptbx/printf_wrappers.h ccp4io_adaptbx/dev/ ccp4io_adaptbx/dev/fftlib.hpp sent 87,984 bytes received 326 bytes 176,620.00 bytes/sec total size is 86,683 speedup is 0.98 building file list ... done cctbx/ cctbx/adptbx.h cctbx/anharmonic.h cctbx/coordinates.h cctbx/crystal_orientation.h cctbx/cumulative_intensity_distribution.h cctbx/error.h cctbx/french_wilson.h cctbx/hendrickson_lattman.h cctbx/import_scitbx_af.h cctbx/miller.h cctbx/restraints.h cctbx/tagged_value.h cctbx/uctbx.h cctbx/adp_restraints/ cctbx/adp_restraints/adp_restraints.h cctbx/adp_restraints/adp_similarity.h cctbx/adp_restraints/aniso_restraints.h cctbx/adp_restraints/fixed_u_eq_adp.h cctbx/adp_restraints/isotropic_adp.h cctbx/adp_restraints/rigid_bond.h cctbx/adp_restraints/rigu.h cctbx/adptbx/ cctbx/adptbx/hirshfeld.h cctbx/covariance/ cctbx/covariance/covariance.h cctbx/crystal/ cctbx/crystal/asu_clusters.h cctbx/crystal/close_packing.h cctbx/crystal/coordination_sequences.h cctbx/crystal/direct_space_asu.h cctbx/crystal/incremental_pairs.h cctbx/crystal/namespace.h cctbx/crystal/neighbors_fast.h cctbx/crystal/neighbors_simple.h cctbx/crystal/pair_tables.h cctbx/crystal/site_cluster_analysis.h cctbx/crystal/symmetry.h cctbx/crystal/workarounds_bpl.h cctbx/dmtbx/ cctbx/dmtbx/triplet_generator.h cctbx/dmtbx/triplet_phase_relation.h cctbx/eltbx/ cctbx/eltbx/attenuation_coefficient.h cctbx/eltbx/basic.h cctbx/eltbx/chemical_elements.h cctbx/eltbx/covalent_radii.h cctbx/eltbx/electron_scattering.h cctbx/eltbx/fp_fdp.h cctbx/eltbx/henke.h cctbx/eltbx/icsd_radii.h cctbx/eltbx/neutron.h cctbx/eltbx/sasaki.h cctbx/eltbx/tiny_pse.h cctbx/eltbx/wavelengths.h cctbx/eltbx/xray_scattering.h cctbx/eltbx/xray_scattering/ cctbx/eltbx/xray_scattering/form_factor.h cctbx/eltbx/xray_scattering/gaussian.h cctbx/eltbx/xray_scattering/n_gaussian.h cctbx/eltbx/xray_scattering/n_gaussian_raw.h cctbx/examples/ cctbx/examples/merging/ cctbx/examples/merging/postrefine_base.h cctbx/examples/merging/xscale_prototype_core.h cctbx/geometry/ cctbx/geometry/geometry.h cctbx/geometry_restraints/ cctbx/geometry_restraints/angle.h cctbx/geometry_restraints/asu_cache.h cctbx/geometry_restraints/bond.h cctbx/geometry_restraints/bond_misc.h cctbx/geometry_restraints/bond_similarity.h cctbx/geometry_restraints/bond_sorted.h cctbx/geometry_restraints/chirality.h cctbx/geometry_restraints/dihedral.h cctbx/geometry_restraints/motif.h cctbx/geometry_restraints/namespace.h cctbx/geometry_restraints/nonbonded.h cctbx/geometry_restraints/nonbonded_sorted.h cctbx/geometry_restraints/parallelity.h cctbx/geometry_restraints/planarity.h cctbx/geometry_restraints/proxy_select.h cctbx/geometry_restraints/shared_wrapper_pickle.hpp cctbx/geometry_restraints/sorted_asu_proxies.h cctbx/geometry_restraints/utils.h cctbx/maptbx/ cctbx/maptbx/asymmetric_map.h cctbx/maptbx/average_densities.h cctbx/maptbx/connectivity.h cctbx/maptbx/coordinate_transformers.h cctbx/maptbx/copy.h cctbx/maptbx/fft.h cctbx/maptbx/fsc.h cctbx/maptbx/ft_analytical_1d_point_scatterer_at_origin.h cctbx/maptbx/grid_indices_around_sites.h cctbx/maptbx/grid_tags.h cctbx/maptbx/gridding.h cctbx/maptbx/histogram.h cctbx/maptbx/interpolation.h cctbx/maptbx/loft.h cctbx/maptbx/map_accumulator.h cctbx/maptbx/marked_grid_points.h cctbx/maptbx/mask.h cctbx/maptbx/mask_utils.h cctbx/maptbx/namespace.h cctbx/maptbx/peak_search.h cctbx/maptbx/resolution.h cctbx/maptbx/skeletons.h cctbx/maptbx/sphericity.h cctbx/maptbx/standard_deviations_around_sites.hpp cctbx/maptbx/statistics.h cctbx/maptbx/structure_factors.h cctbx/maptbx/target_and_gradients.h cctbx/maptbx/utils.h cctbx/maptbx/accessors/ cctbx/maptbx/accessors/c_grid_p1.h cctbx/maptbx/accessors/c_grid_padded_p1.h cctbx/maptbx/bcr/ cctbx/maptbx/bcr/bcr.h cctbx/masks/ cctbx/masks/around_atoms.h cctbx/masks/flood_fill.h cctbx/math/ cctbx/math/array_utils.h cctbx/math/cos_sin_table.h cctbx/math/loop_n_from_m.h cctbx/math/mod.h cctbx/miller/ cctbx/miller/amplitude_normalisation.h cctbx/miller/asu.h cctbx/miller/bins.h cctbx/miller/change_basis.h cctbx/miller/expand_to_p1.h cctbx/miller/f_calc_map.h cctbx/miller/index_generator.h cctbx/miller/index_span.h cctbx/miller/lookup_utils.h cctbx/miller/match.h cctbx/miller/match_bijvoet_mates.h cctbx/miller/match_indices.h cctbx/miller/match_multi_indices.h cctbx/miller/math.h cctbx/miller/merge_equivalents.h cctbx/miller/phase_integrator.h cctbx/miller/phase_transfer.h cctbx/miller/randomize_amplitude_and_phase.h cctbx/miller/slices.h cctbx/miller/sym_equiv.h cctbx/miller/union_of_indices.h cctbx/multipolar/ cctbx/multipolar/aspherical.h cctbx/sgtbx/ cctbx/sgtbx/basic.h cctbx/sgtbx/brick.h cctbx/sgtbx/change_of_basis_op.h cctbx/sgtbx/find_affine.h cctbx/sgtbx/group_codes.h cctbx/sgtbx/lattice_symmetry.h cctbx/sgtbx/lattice_tr.h cctbx/sgtbx/miller_ops.h cctbx/sgtbx/operator_from_axis_direction.h cctbx/sgtbx/parse_string.h cctbx/sgtbx/phase_info.h cctbx/sgtbx/reciprocal_space_asu.h cctbx/sgtbx/reciprocal_space_reference_asu.h cctbx/sgtbx/reference_settings.h cctbx/sgtbx/rot_mx.h cctbx/sgtbx/rot_mx_hash.h cctbx/sgtbx/rot_mx_info.h cctbx/sgtbx/rotation_matrices.h cctbx/sgtbx/row_echelon_solve.h cctbx/sgtbx/rt_mx.h cctbx/sgtbx/rt_mx_hash.h cctbx/sgtbx/search_symmetry.h cctbx/sgtbx/select_generators.h cctbx/sgtbx/seminvariant.h cctbx/sgtbx/site_constraints.h cctbx/sgtbx/site_symmetry.h cctbx/sgtbx/site_symmetry_table.h cctbx/sgtbx/smith_normal_form.h cctbx/sgtbx/space_group.h cctbx/sgtbx/space_group_hash.h cctbx/sgtbx/space_group_type.h cctbx/sgtbx/sym_equiv_sites.h cctbx/sgtbx/symbols.h cctbx/sgtbx/sys_abs_equiv.h cctbx/sgtbx/tensor_rank_2.h cctbx/sgtbx/tensors.h cctbx/sgtbx/tr_group.h cctbx/sgtbx/tr_group_hash.h cctbx/sgtbx/tr_vec.h cctbx/sgtbx/tr_vec_hash.h cctbx/sgtbx/utils.h cctbx/sgtbx/wyckoff.h cctbx/sgtbx/direct_space_asu/ cctbx/sgtbx/direct_space_asu/proto/ cctbx/sgtbx/direct_space_asu/proto/asymmetric_unit.h cctbx/sgtbx/direct_space_asu/proto/cut.h cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.h cctbx/sgtbx/direct_space_asu/proto/expressions.h cctbx/sgtbx/direct_space_asu/proto/facet_collection.h cctbx/sgtbx/direct_space_asu/proto/reference_table.h cctbx/sgtbx/direct_space_asu/proto/shortcuts.h cctbx/sgtbx/direct_space_asu/proto/small_vec_math.h cctbx/symmetry_search/ cctbx/symmetry_search/translation_refinement.h cctbx/translation_search/ cctbx/translation_search/fast_nv1995.h cctbx/translation_search/fast_terms.h cctbx/translation_search/namespace.h cctbx/translation_search/symmetry_flags.h cctbx/translation_search/fast_nv1995/ cctbx/translation_search/fast_nv1995/combinations.h cctbx/translation_search/fast_nv1995/intermediates.h cctbx/translation_search/fast_nv1995/summations.h cctbx/uctbx/ cctbx/uctbx/fast_minimum_reduction.h cctbx/uctbx/determine_unit_cell/ cctbx/uctbx/determine_unit_cell/NCDist.h cctbx/xray/ cctbx/xray/conversions.h cctbx/xray/curvatures_simple.h cctbx/xray/each_hkl_gradients_direct.h cctbx/xray/extinction.h cctbx/xray/f_model.h cctbx/xray/fast_gradients.h cctbx/xray/gradient_flags.h cctbx/xray/gradients_direct.h cctbx/xray/grouped_data.h cctbx/xray/hr_ht_cache.h cctbx/xray/minimization.h cctbx/xray/observations.h cctbx/xray/packing_order.h cctbx/xray/parameter_map.h cctbx/xray/sampled_model_density.h cctbx/xray/sampling_base.h cctbx/xray/sampling_loop.h cctbx/xray/scatterer.h cctbx/xray/scatterer_flags.h cctbx/xray/scatterer_utils.h cctbx/xray/scattering_type_registry.h cctbx/xray/sigmaa.h cctbx/xray/structure_factors_direct.h cctbx/xray/structure_factors_simple.h cctbx/xray/targets.h cctbx/xray/twin_component.h cctbx/xray/twin_targets.h cctbx/xray/targets/ cctbx/xray/targets/common_results.h cctbx/xray/targets/correlation.h cctbx/xray/targets/least_squares.h cctbx/xray/targets/mlf.h cctbx/xray/targets/mlhl.h cctbx/xray/targets/mli.h cctbx/xray/targets/shelxl_wght_ls.hpp sent 1,905,016 bytes received 4,420 bytes 3,818,872.00 bytes/sec total size is 1,887,892 speedup is 0.99 building file list ... done cma_es/ cma_es/cma/ cma_es/cma/cmaes.h cma_es/cma/cmaes_interface.h sent 6,882 bytes received 60 bytes 13,884.00 bytes/sec total size is 6,671 speedup is 0.96 building file list ... done sent 192 bytes received 12 bytes 408.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done dxtbx/ dxtbx/error.h dxtbx/imageset.h dxtbx/array_family/ dxtbx/array_family/flex_table.h dxtbx/array_family/flex_table_suite.h dxtbx/array_family/ref_pickle_double_buffered.h dxtbx/boost_python/ dxtbx/boost_python/compression.h dxtbx/format/ dxtbx/format/image.h dxtbx/format/boost_python/ dxtbx/format/boost_python/cbf_read_buffer.h dxtbx/masking/ dxtbx/masking/goniometer_shadow_masking.h dxtbx/masking/masking.h dxtbx/model/ dxtbx/model/beam.h dxtbx/model/crystal.h dxtbx/model/detector.h dxtbx/model/experiment.h dxtbx/model/experiment_list.h dxtbx/model/goniometer.h dxtbx/model/kappa_goniometer.h dxtbx/model/model_helpers.h dxtbx/model/multi_axis_goniometer.h dxtbx/model/panel.h dxtbx/model/panel_data.h dxtbx/model/parallax_correction.h dxtbx/model/pixel_to_millimeter.h dxtbx/model/ray_intersection.h dxtbx/model/scan.h dxtbx/model/scan_helpers.h dxtbx/model/spectrum.h dxtbx/model/virtual_panel.h dxtbx/model/boost_python/ dxtbx/model/boost_python/pickle_suite.h dxtbx/model/boost_python/to_from_dict.h sent 396,182 bytes received 610 bytes 793,584.00 bytes/sec total size is 393,719 speedup is 0.99 building file list ... done ./ fem.hpp noexcept_false.hpp fem/ fem/arr.hpp fem/arr_and_str_indices.hpp fem/arr_ref.hpp fem/arr_size.hpp fem/close_chain.hpp fem/common.hpp fem/data.hpp fem/data_of_type.hpp fem/data_type_star.hpp fem/dimension.hpp fem/do.hpp fem/error_utils.hpp fem/file_positioning_chain.hpp fem/format.hpp fem/inquire_chain.hpp fem/intrinsics.hpp fem/intrinsics_extra.hpp fem/io.hpp fem/io_exceptions.hpp fem/main.hpp fem/major_types.hpp fem/open_chain.hpp fem/read.hpp fem/size_t.hpp fem/star.hpp fem/stop.hpp fem/str.hpp fem/str_arr_ref.hpp fem/str_ref.hpp fem/variant.hpp fem/write.hpp fem/zero.hpp fem/utils/ fem/utils/char.hpp fem/utils/double_to_string.hpp fem/utils/equivalence.hpp fem/utils/int_types.hpp fem/utils/misc.hpp fem/utils/path.hpp fem/utils/random.hpp fem/utils/real_as_string.hpp fem/utils/simple_streams.hpp fem/utils/string.hpp fem/utils/string_to_double.hpp fem/utils/string_to_double_fmt.hpp fem/utils/token.hpp sent 204,024 bytes received 918 bytes 409,884.00 bytes/sec total size is 200,764 speedup is 0.98 building file list ... done gltbx/ gltbx/error.h gltbx/error_utils.h gltbx/fonts_ucs.h gltbx/glext.h gltbx/include_opengl.h gltbx/pointer_args_bpl.h gltbx/quadrics.h gltbx/special_wrapper_support.h gltbx/util.h sent 598,802 bytes received 190 bytes 1,197,984.00 bytes/sec total size is 597,954 speedup is 1.00 building file list ... done iotbx/ iotbx/error.h iotbx/detectors/ iotbx/detectors/bruker.h iotbx/detectors/display.h iotbx/detectors/image_divider.h iotbx/detectors/scanbox.h iotbx/detectors/context/ iotbx/detectors/context/spot_xy_convention.h iotbx/dsn6/ iotbx/dsn6/dsn6.hpp iotbx/mtz/ iotbx/mtz/batch.h iotbx/mtz/column.h iotbx/mtz/crystal.h iotbx/mtz/dataset.h iotbx/mtz/object.h iotbx/pdb/ iotbx/pdb/common_residue_names.h iotbx/pdb/hierarchy.h iotbx/pdb/hierarchy_atoms.h iotbx/pdb/hierarchy_bpl.h iotbx/pdb/hybrid_36_c.h iotbx/pdb/hybrid_36_cpp.h iotbx/pdb/input.h iotbx/pdb/modified_aa_names.h iotbx/pdb/modified_rna_dna_names.h iotbx/pdb/namespace.h iotbx/pdb/rna_dna_atom_names.h iotbx/pdb/small_str.h iotbx/pdb/utils.h iotbx/pdb/write_utils.h iotbx/pdb/write_utils_bpl.h iotbx/pdb/xray_structure.h iotbx/shelx/ iotbx/shelx/hklf.h iotbx/xplor/ iotbx/xplor/map_reader.h iotbx/xplor/map_writer.h sent 270,347 bytes received 629 bytes 541,952.00 bytes/sec total size is 267,526 speedup is 0.99 building file list ... done sent 462 bytes received 12 bytes 948.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done mmtbx/ mmtbx/error.h mmtbx/import_scitbx_af.h mmtbx/alignment/ mmtbx/alignment/align.h mmtbx/alignment/alignment.h mmtbx/alignment/tables.h mmtbx/building/ mmtbx/building/loop_closure/ mmtbx/building/loop_closure/ccd.h mmtbx/bulk_solvent/ mmtbx/bulk_solvent/bulk_solvent.h mmtbx/bulk_solvent/mosaic.h mmtbx/den/ mmtbx/den/den.h mmtbx/dynamics/ mmtbx/dynamics/dynamics.h mmtbx/f_model/ mmtbx/f_model/f_model.h mmtbx/geometry/ mmtbx/geometry/asa.hpp mmtbx/geometry/calculator.hpp mmtbx/geometry/clash.hpp mmtbx/geometry/containment.hpp mmtbx/geometry/flattening.hpp mmtbx/geometry/indexing.hpp mmtbx/geometry/overlap.hpp mmtbx/geometry/primitive.hpp mmtbx/geometry/sphere_surface_sampling.hpp mmtbx/geometry/boost_python/ mmtbx/geometry/boost_python/containment.hpp mmtbx/geometry/boost_python/indexing.hpp mmtbx/geometry_restraints/ mmtbx/geometry_restraints/ramachandran.h mmtbx/geometry_restraints/reference_coordinate.h mmtbx/hydrogens/ mmtbx/hydrogens/hydrogens.h mmtbx/masks/ mmtbx/masks/atom_mask.h mmtbx/masks/grid_symop.h mmtbx/masks/util.h mmtbx/max_lik/ mmtbx/max_lik/max_lik.h mmtbx/max_lik/solvent_distribution_nco_09may2005.h mmtbx/max_lik/solvent_distribution_nco_09may2005_short.h mmtbx/max_lik/solvent_distribution_nco_09may2005_short_uniform.h mmtbx/max_lik/solvent_distribution_nco_14mar2005.h mmtbx/max_lik/solvent_distribution_nco_14mar2005_mod.h mmtbx/max_lik/solvent_distribution_nco_14mar2005_short.h mmtbx/max_lik/wat_dist_r_0_1.h mmtbx/max_lik/wat_dist_r_2p0_2p5.h mmtbx/ncs/ mmtbx/ncs/cartesian_restraints.h mmtbx/ncs/tncs.h mmtbx/pair_interaction/ mmtbx/pair_interaction/interaction.h mmtbx/probe/ mmtbx/probe/Common.h mmtbx/probe/DotSpheres.h mmtbx/probe/Scoring.h mmtbx/probe/SpatialQuery.h mmtbx/reduce/ mmtbx/reduce/InteractionGraph.h mmtbx/reduce/Optimizers.h mmtbx/reduce/PositionReturn.h mmtbx/rotamer/ mmtbx/rotamer/fit.h mmtbx/rsr/ mmtbx/rsr/rsr.h mmtbx/scaling/ mmtbx/scaling/absolute_scaling.h mmtbx/scaling/outlier.h mmtbx/scaling/relative_scaling.h mmtbx/scaling/scaling.h mmtbx/scaling/twinning.h mmtbx/secondary_structure/ mmtbx/secondary_structure/dssp.hpp mmtbx/secondary_structure/identify.hpp mmtbx/tls/ mmtbx/tls/decompose.h mmtbx/tls/optimise_amplitudes.h mmtbx/tls/tls.h mmtbx/tls/utils.h mmtbx/utils/ mmtbx/utils/utils.h mmtbx/validation/ mmtbx/validation/ramachandran/ mmtbx/validation/ramachandran/rama8000_tables.h mmtbx/validation/ramachandran/rama_eval.h sent 2,052,658 bytes received 1,291 bytes 4,107,898.00 bytes/sec total size is 2,046,334 speedup is 1.00 building file list ... done omptbx/ omptbx/lock.h omptbx/omp_or_stubs.h omptbx/stubs.h sent 2,105 bytes received 76 bytes 4,362.00 bytes/sec total size is 1,850 speedup is 0.85 building file list ... done rstbx/ rstbx/backplane.h rstbx/import_scitbx_af.hpp rstbx/apps/ rstbx/apps/stills/ rstbx/apps/stills/simple_integration.h rstbx/bandpass/ rstbx/bandpass/parameters.h rstbx/bandpass/subpixel_joint_model.h rstbx/bpcx/ rstbx/bpcx/detector_model/ rstbx/bpcx/detector_model/sensor.h rstbx/diffraction/ rstbx/diffraction/ewald_sphere.h rstbx/diffraction/partial_spot_position_partial_H.h rstbx/diffraction/reflection_range.h rstbx/diffraction/fastbragg/ rstbx/diffraction/fastbragg/fastbragg.h rstbx/dps_core/ rstbx/dps_core/direction.h rstbx/dps_core/directional_fft.h rstbx/dps_core/dps_core.h rstbx/dps_core/spotclass.h rstbx/indexing_api/ rstbx/indexing_api/indexing_api.h rstbx/simage/ rstbx/simage/image_simple.hpp rstbx/simulation/ rstbx/simulation/sim_xfel1.h rstbx/symmetry/ rstbx/symmetry/constraints/ rstbx/symmetry/constraints/a_g_conversion.h sent 111,360 bytes received 400 bytes 74,506.67 bytes/sec total size is 109,476 speedup is 0.98 building file list ... done scitbx/ scitbx/auto_array.h scitbx/constants.h scitbx/cubicle_neighbors.hpp scitbx/cubicles.h scitbx/error.h scitbx/error_utils.h scitbx/histogram.h scitbx/indexed_value.h scitbx/iso_surface.h scitbx/lbfgs.h scitbx/lbfgsb.h scitbx/mat2.h scitbx/mat3.h scitbx/numerical.h scitbx/r3_utils.hpp scitbx/random.h scitbx/random_legacy_boost_1_63.h scitbx/rational.h scitbx/rotr3.h scitbx/sym_mat2.h scitbx/sym_mat3.h scitbx/type_holder.h scitbx/vec2.h scitbx/vec3.h scitbx/weighted_histogram.h scitbx/array_family/ scitbx/array_family/array_adaptor.h scitbx/array_family/block_iterator.h scitbx/array_family/counts.h scitbx/array_family/error.h scitbx/array_family/flex_types.h scitbx/array_family/initialiser.h scitbx/array_family/linear_interpolation.h scitbx/array_family/loops.h scitbx/array_family/memory.h scitbx/array_family/misc_functions.h scitbx/array_family/owning_ref.h scitbx/array_family/range.h scitbx/array_family/ref.h scitbx/array_family/ref_matrix.h scitbx/array_family/ref_reductions.h scitbx/array_family/selections.h scitbx/array_family/shared.h scitbx/array_family/shared_plain.h scitbx/array_family/simple_io.h scitbx/array_family/simple_tiny_io.h scitbx/array_family/slice.h scitbx/array_family/small.h scitbx/array_family/small_plain.h scitbx/array_family/sort.h scitbx/array_family/tiny.h scitbx/array_family/tiny_mat_ref.h scitbx/array_family/tiny_plain.h scitbx/array_family/tiny_types.h scitbx/array_family/type_traits.h scitbx/array_family/versa.h scitbx/array_family/versa_matrix.h scitbx/array_family/versa_plain.h scitbx/array_family/accessors/ scitbx/array_family/accessors/c_grid.h scitbx/array_family/accessors/c_grid_padded.h scitbx/array_family/accessors/c_grid_padded_periodic.h scitbx/array_family/accessors/c_grid_periodic.h scitbx/array_family/accessors/c_index_1d_calculator.h scitbx/array_family/accessors/c_interval_grid.h scitbx/array_family/accessors/f_grid.h scitbx/array_family/accessors/flex_grid.h scitbx/array_family/accessors/mat_grid.h scitbx/array_family/accessors/packed_matrix.h scitbx/array_family/accessors/rectangular_full_packed.h scitbx/array_family/accessors/row_and_column.h scitbx/array_family/accessors/striding.h scitbx/array_family/accessors/traits.h scitbx/array_family/accessors/trivial.h scitbx/array_family/boost_python/ scitbx/array_family/boost_python/byte_str.h scitbx/array_family/boost_python/c_grid_flex_conversions.h scitbx/array_family/boost_python/flex_helpers.h scitbx/array_family/boost_python/flex_pickle_double_buffered.h scitbx/array_family/boost_python/flex_pickle_single_buffered.h scitbx/array_family/boost_python/flex_wrapper.h scitbx/array_family/boost_python/flex_wrapper_complex.h scitbx/array_family/boost_python/numpy_bridge.hpp scitbx/array_family/boost_python/owning_ref_conversions.h scitbx/array_family/boost_python/packed_to_flex_conversions.h scitbx/array_family/boost_python/passing_flex_by_reference.h scitbx/array_family/boost_python/range_wrappers.h scitbx/array_family/boost_python/ref_flex_conversions.h scitbx/array_family/boost_python/ref_from_array.h scitbx/array_family/boost_python/ref_pickle_double_buffered.h scitbx/array_family/boost_python/selections_wrapper.h scitbx/array_family/boost_python/shared_flat_conversions.h scitbx/array_family/boost_python/shared_flex_conversions.h scitbx/array_family/boost_python/shared_wrapper.h scitbx/array_family/boost_python/utils.h scitbx/array_family/detail/ scitbx/array_family/detail/auto_allocator.h scitbx/array_family/detail/generic_array_functors.h scitbx/array_family/detail/generic_array_operators.h scitbx/array_family/detail/misc.h scitbx/array_family/detail/push_back_etc.h scitbx/array_family/detail/reducing_boolean_mem_fun.h scitbx/array_family/detail/ref_helpers.h scitbx/array_family/detail/tiny_helpers.h scitbx/boost_python/ scitbx/boost_python/array_as_list.h scitbx/boost_python/container_conversions.h scitbx/boost_python/cstringio_utils.h scitbx/boost_python/is_polymorphic_workaround.h scitbx/boost_python/iterator_range.hpp scitbx/boost_python/iterator_wrappers.h scitbx/boost_python/pair_as_tuple.hpp scitbx/boost_python/sequence_as_array.h scitbx/boost_python/slice.h scitbx/boost_python/stl_map_as_dict.h scitbx/boost_python/utils.h scitbx/examples/ scitbx/examples/bevington/ scitbx/examples/bevington/prototype_core.h scitbx/fftpack/ scitbx/fftpack/complex_to_complex.h scitbx/fftpack/complex_to_complex_2d.h scitbx/fftpack/complex_to_complex_3d.h scitbx/fftpack/factorization.h scitbx/fftpack/gridding.h scitbx/fftpack/real_to_complex.h scitbx/fftpack/real_to_complex_3d.h scitbx/fftpack/detail/ scitbx/fftpack/detail/real_to_complex_backward.h scitbx/fftpack/detail/real_to_complex_forward.h scitbx/fftpack/detail/ref.h scitbx/glmtbx/ scitbx/glmtbx/family.h scitbx/glmtbx/glm.h scitbx/glmtbx/robust_glm.h scitbx/graphics_utils/ scitbx/graphics_utils/colors.h scitbx/lbfgs/ scitbx/lbfgs/drop_convergence_test.h scitbx/lbfgs/raw.h scitbx/lbfgs/raw_reference.h scitbx/lbfgsb/ scitbx/lbfgsb/fortran_interface.h scitbx/lbfgsb/raw.h scitbx/line_search/ scitbx/line_search/more_thuente_1994.h scitbx/line_search/more_thuente_1994_raw.h scitbx/lstbx/ scitbx/lstbx/normal_equations.h scitbx/math/ scitbx/math/2d_zernike_moments.h scitbx/math/accumulators.h scitbx/math/angle_derivative.h scitbx/math/approx_equal.h scitbx/math/atanh.h scitbx/math/basic_statistics.h scitbx/math/bessel.h scitbx/math/cartesian_product_fixed_size.hpp scitbx/math/chebyshev.h scitbx/math/compile_time.h scitbx/math/continued_fraction.h scitbx/math/copysign.h scitbx/math/cubic_equation.h scitbx/math/dihedral.h scitbx/math/distance_difference.h scitbx/math/distributions.h scitbx/math/eigensystem.h scitbx/math/erf.h scitbx/math/euler_angles.h scitbx/math/fast_approx_math.h scitbx/math/floating_point_epsilon.h scitbx/math/g_function.h scitbx/math/gamma.h scitbx/math/gaussian_fit_1d_analytical.h scitbx/math/gcd.h scitbx/math/golay.h scitbx/math/halton.h scitbx/math/icosahedron.h scitbx/math/imaginary.h scitbx/math/inertia_tensor.h scitbx/math/interpolation.h scitbx/math/jacks_expf.h scitbx/math/lambertw.h scitbx/math/least_squares_plane.h scitbx/math/linear_correlation.h scitbx/math/linear_interpolation.h scitbx/math/linear_regression.h scitbx/math/mean_and_variance.h scitbx/math/minimum_covering_sphere.h scitbx/math/modulo.h scitbx/math/namespace.h scitbx/math/numeric_limits.h scitbx/math/orthonormal_basis.h scitbx/math/parabolic_cylinder_d.h scitbx/math/phase_error.h scitbx/math/polygon_intersection.h scitbx/math/principal_axes_of_inertia.h scitbx/math/quadrature.h scitbx/math/r3_rotation.h scitbx/math/resample.h scitbx/math/rotate_around_axis.h scitbx/math/rotation.h scitbx/math/superpose.h scitbx/math/tetrahedron.h scitbx/math/traits.h scitbx/math/unimodular_generator.h scitbx/math/utils.h scitbx/math/weighted_covariance.h scitbx/math/zernike.h scitbx/math/zernike_moments.h scitbx/math/erf/ scitbx/math/erf/constants.h scitbx/math/erf/engine.h scitbx/math/gaussian/ scitbx/math/gaussian/fit.h scitbx/math/gaussian/namespace.h scitbx/math/gaussian/sum.h scitbx/math/gaussian/term.h scitbx/matrix/ scitbx/matrix/as_xyz.h scitbx/matrix/cholesky.h scitbx/matrix/delta_tensors.h scitbx/matrix/diagonal.h scitbx/matrix/eigensystem.h scitbx/matrix/givens.h scitbx/matrix/householder.h scitbx/matrix/inversion.h scitbx/matrix/lu_decomposition.h scitbx/matrix/matrix_vector_operations.h scitbx/matrix/move.h scitbx/matrix/multiply.h scitbx/matrix/norms.h scitbx/matrix/outer_product.h scitbx/matrix/packed.h scitbx/matrix/row_echelon.h scitbx/matrix/row_echelon_full_pivoting.h scitbx/matrix/row_echelon_full_pivoting_impl.h scitbx/matrix/row_echelon_full_pivoting_small.h scitbx/matrix/special_matrices.h scitbx/matrix/svd.h scitbx/matrix/symmetric_rank_1_update.h scitbx/matrix/tensor_rank_2.h scitbx/matrix/tensors.h scitbx/matrix/tests.h scitbx/matrix/transpose_multiply.h scitbx/matrix/triangular_systems.h scitbx/matrix/vector_operations.h scitbx/matrix/tests/ scitbx/matrix/tests/utils.h scitbx/minpack/ scitbx/minpack/levenberg_marquardt.h scitbx/minpack/raw.h scitbx/misc/ scitbx/misc/file_utils.h scitbx/misc/positive_getitem_index.h scitbx/misc/split_lines.h scitbx/random/ scitbx/random/mersenne_twister.h scitbx/random/variate_generator.h scitbx/random/boost_python/ scitbx/random/boost_python/random.h scitbx/rigid_body/ scitbx/rigid_body/array_packing.h scitbx/rigid_body/body_lib.h scitbx/rigid_body/body_t.h scitbx/rigid_body/featherstone.h scitbx/rigid_body/joint_lib.h scitbx/rigid_body/joint_t.h scitbx/rigid_body/matrix_helpers.h scitbx/rigid_body/namespace.h scitbx/rigid_body/spatial_lib.h scitbx/rigid_body/tardy.h scitbx/serialization/ scitbx/serialization/base_256.h scitbx/serialization/double_buffered.h scitbx/serialization/single_buffered.h scitbx/slatec/ scitbx/slatec/lib_c.h scitbx/slatec/lib_cpp.h scitbx/sparse/ scitbx/sparse/approx_equal.h scitbx/sparse/dfs.h scitbx/sparse/io.h scitbx/sparse/lu_factorization.h scitbx/sparse/matrix.h scitbx/sparse/operators.h scitbx/sparse/random.h scitbx/sparse/triangular.h scitbx/sparse/util.h scitbx/sparse/vector.h scitbx/sparse/boost_python/ scitbx/sparse/boost_python/vector.h scitbx/stl/ scitbx/stl/map_as_python_dict.h scitbx/stl/map_fwd.h scitbx/stl/map_wrapper.h scitbx/stl/set_wrapper.h scitbx/stl/vector_as_python_list.h scitbx/stl/vector_io.h scitbx/stl/vector_wrapper.h scitbx/suffixtree/ scitbx/suffixtree/builder.hpp scitbx/suffixtree/edge.hpp scitbx/suffixtree/exception.hpp scitbx/suffixtree/glyph.hpp scitbx/suffixtree/iterator.hpp scitbx/suffixtree/matching_statistics.hpp scitbx/suffixtree/tree.hpp scitbx/suffixtree/word.hpp scitbx/suffixtree/boost_python/ scitbx/suffixtree/boost_python/edge_exports.hpp scitbx/suffixtree/boost_python/iterator_wrapper.hpp scitbx/suffixtree/boost_python/object_extensions.hpp scitbx/suffixtree/boost_python/tree_exports.hpp scitbx/util/ scitbx/util/cpu_timer.h scitbx/wigner/ scitbx/wigner/wigner3j.h sent 1,906,380 bytes received 5,521 bytes 3,823,802.00 bytes/sec total size is 1,886,121 speedup is 0.99 building file list ... done sent 146 bytes received 12 bytes 316.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ smtbx/error.h smtbx/import_cctbx.h smtbx/import_scitbx_af.h smtbx/ab_initio/ smtbx/ab_initio/density_modification.h smtbx/refinement/ smtbx/refinement/import_cctbx_xray.h smtbx/refinement/least_squares.h smtbx/refinement/weighting_schemes.h smtbx/refinement/constraints/ smtbx/refinement/constraints/affine.h smtbx/refinement/constraints/direction.h smtbx/refinement/constraints/geometrical_hydrogens.h smtbx/refinement/constraints/occupancy.h smtbx/refinement/constraints/proxy.h smtbx/refinement/constraints/reparametrisation.h smtbx/refinement/constraints/rigid.h smtbx/refinement/constraints/same_group.h smtbx/refinement/constraints/scaled_adp.h smtbx/refinement/constraints/scatterer_parameters.h smtbx/refinement/constraints/shared.h smtbx/refinement/constraints/special_position.h smtbx/refinement/constraints/symmetry_equivalent.h smtbx/refinement/constraints/u_eq_dependent_u_iso.h smtbx/refinement/constraints/u_iso_dependent_u_iso.h smtbx/refinement/restraints/ smtbx/refinement/restraints/origin_fixing.h smtbx/structure_factors/ smtbx/structure_factors/direct/ smtbx/structure_factors/direct/standard_xray.h smtbx/structure_factors/direct/table_based.h sent 182,173 bytes received 512 bytes 365,370.00 bytes/sec total size is 179,686 speedup is 0.98 building file list ... done spotfinder/ spotfinder/applications/ spotfinder/applications/find_active_area.h spotfinder/core_toolbox/ spotfinder/core_toolbox/distl.h spotfinder/core_toolbox/hough.h spotfinder/core_toolbox/libdistl.h spotfinder/core_toolbox/spot_shapes.h spotfinder/core_toolbox/spot_types.h spotfinder/core_toolbox/spotfilter.h spotfinder/core_toolbox/boost_python/ spotfinder/core_toolbox/boost_python/singlemask.h spotfinder/dxtbx_toolbox/ spotfinder/dxtbx_toolbox/distl.h spotfinder/dxtbx_toolbox/libdistl.h sent 42,962 bytes received 221 bytes 86,366.00 bytes/sec total size is 41,966 speedup is 0.97 building file list ... done tbxx/ tbxx/alignment.h tbxx/error_utils.hpp tbxx/libc_backtrace.hpp tbxx/optional_copy.hpp tbxx/pretty_type_name.hpp tbxx/time_accu.hpp sent 12,022 bytes received 133 bytes 24,310.00 bytes/sec total size is 11,532 speedup is 0.95 building file list ... done sent 152 bytes received 12 bytes 328.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done ./ boost_adaptbx/ boost_adaptbx/type_id_eq.h cctbx/boost_python/ cctbx/boost_python/flex_fwd.h scitbx/lbfgs_fem.hpp scitbx/array_family/ scitbx/array_family/operator_traits_builtin.h scitbx/array_family/ref_algebra.h scitbx/array_family/ref_apply.h scitbx/array_family/shared_algebra.h scitbx/array_family/shared_apply.h scitbx/array_family/shared_plain_apply.h scitbx/array_family/shared_reductions.h scitbx/array_family/small_algebra.h scitbx/array_family/small_apply.h scitbx/array_family/small_plain_apply.h scitbx/array_family/small_reductions.h scitbx/array_family/tiny_algebra.h scitbx/array_family/tiny_apply.h scitbx/array_family/tiny_plain_apply.h scitbx/array_family/tiny_reductions.h scitbx/array_family/versa_algebra.h scitbx/array_family/versa_apply.h scitbx/array_family/versa_plain_apply.h scitbx/array_family/versa_reductions.h scitbx/array_family/boost_python/ scitbx/array_family/boost_python/flex_fwd.h scitbx/array_family/detail/ scitbx/array_family/detail/operator_functors.h scitbx/array_family/detail/std_imports.h smtbx/boost_python/ smtbx/boost_python/flex_fwd.h sent 347,315 bytes received 531 bytes 695,692.00 bytes/sec total size is 345,070 speedup is 0.99 building file list ... done sent 253 bytes received 12 bytes 530.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done boost_adaptbx/ boost_adaptbx/command_line/ sent 521 bytes received 22 bytes 1,086.00 bytes/sec total size is 6,883 speedup is 12.68 building file list ... done cbflib_adaptbx/ cbflib_adaptbx/command_line/ sent 224 bytes received 22 bytes 492.00 bytes/sec total size is 1,215 speedup is 4.94 building file list ... done sent 143 bytes received 12 bytes 310.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done cctbx/ cctbx/command_line/ cctbx/command_line/web.install.csh sent 3,069 bytes received 41 bytes 6,220.00 bytes/sec total size is 39,666 speedup is 12.75 building file list ... done sent 81 bytes received 12 bytes 186.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done crys3d/ crys3d/command_line/ sent 459 bytes received 22 bytes 962.00 bytes/sec total size is 31,515 speedup is 65.52 building file list ... done dxtbx/ dxtbx/command_line/ sent 899 bytes received 22 bytes 1,842.00 bytes/sec total size is 82,029 speedup is 89.07 building file list ... done fable/ fable/command_line/ sent 462 bytes received 22 bytes 968.00 bytes/sec total size is 15,542 speedup is 32.11 building file list ... done gltbx/ gltbx/command_line/ sent 169 bytes received 22 bytes 382.00 bytes/sec total size is 606 speedup is 3.17 building file list ... done iotbx/ iotbx/command_line/ sent 2,847 bytes received 22 bytes 5,738.00 bytes/sec total size is 240,936 speedup is 83.98 building file list ... done libtbx/ libtbx/command_line/ libtbx/command_line/bash.sh libtbx/command_line/bibtex.sh libtbx/command_line/bundle_as_selfx.csh libtbx/command_line/configure.bat libtbx/command_line/configure.sh libtbx/command_line/csh.sh libtbx/command_line/exec.sh libtbx/command_line/gdb.sh libtbx/command_line/latex.sh libtbx/command_line/pdflatex.sh libtbx/command_line/refresh.bat libtbx/command_line/refresh.sh libtbx/command_line/sh.sh libtbx/command_line/tcsh.sh libtbx/command_line/unpack_in_sources.csh libtbx/command_line/valgrind.sh sent 7,290 bytes received 329 bytes 15,238.00 bytes/sec total size is 175,321 speedup is 23.01 building file list ... done mmtbx/ mmtbx/command_line/ mmtbx/regression/ mmtbx/regression/command_line/ mmtbx/regression/command_line/tst_find_residue_in_pdb.py sent 5,086 bytes received 47 bytes 10,266.00 bytes/sec total size is 708,795 speedup is 138.09 building file list ... done sent 70 bytes received 12 bytes 164.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done rstbx/ rstbx/command_line/ sent 777 bytes received 22 bytes 1,598.00 bytes/sec total size is 11,108 speedup is 13.90 building file list ... done scitbx/ scitbx/command_line/ scitbx/command_line/apply_tapenade_hints.py scitbx/command_line/generate_error_h.py scitbx/command_line/histogram.py scitbx/command_line/show_exp_times.py scitbx/command_line/show_sizes.py scitbx/command_line/unicode_examples.py sent 11,713 bytes received 136 bytes 23,698.00 bytes/sec total size is 9,958 speedup is 0.84 building file list ... done sent 146 bytes received 12 bytes 316.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ smtbx/command_line/ sent 881 bytes received 22 bytes 1,806.00 bytes/sec total size is 37,436 speedup is 41.46 building file list ... done spotfinder/ spotfinder/command_line/ sent 510 bytes received 22 bytes 1,064.00 bytes/sec total size is 22,750 speedup is 42.76 building file list ... done sent 81 bytes received 12 bytes 186.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done wxtbx/ wxtbx/command_line/ sent 448 bytes received 22 bytes 940.00 bytes/sec total size is 16,078 speedup is 34.21 building file list ... done sent 253 bytes received 12 bytes 530.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done boost_adaptbx/graph/ boost_adaptbx/graph/tests/ boost_adaptbx/graph/tests/tst_graph.py boost_adaptbx/graph/tests/tst_graph_breadth_first_search.py boost_adaptbx/graph/tests/tst_graph_clustering_algorithm.py boost_adaptbx/graph/tests/tst_graph_connected_component_algorithm.py boost_adaptbx/graph/tests/tst_graph_graph_structure_comparison.py boost_adaptbx/graph/tests/tst_graph_maximum_clique.py boost_adaptbx/graph/tests/tst_graph_metric.py boost_adaptbx/graph/tests/tst_graph_min_cut_max_flow.py boost_adaptbx/graph/tests/tst_graph_minimum_cut_enumerate.py boost_adaptbx/graph/tests/tst_graph_utility.py boost_adaptbx/tests/ boost_adaptbx/tests/tst_boost_thread.py boost_adaptbx/tests/tst_char_array.py boost_adaptbx/tests/tst_deprecation_tools.py boost_adaptbx/tests/tst_libc_backtrace.py boost_adaptbx/tests/tst_optional.py boost_adaptbx/tests/tst_optional_copy.cpp boost_adaptbx/tests/tst_optional_copy.h boost_adaptbx/tests/tst_python_streambuf.py boost_adaptbx/tests/tst_rational.py boost_adaptbx/tests/tst_std_pair.py boost_adaptbx/tests/tst_stderr_stdout.py boost_adaptbx/tests/tst_stdin.py boost_adaptbx/tests/tst_stdout.py boost_adaptbx/tests/tst_string_representation.py boost_adaptbx/tests/tst_swig_args.py boost_adaptbx/tests/tst_tuple.py sent 91,639 bytes received 515 bytes 184,308.00 bytes/sec total size is 89,657 speedup is 0.97 building file list ... done cbflib_adaptbx/detectors/ cbflib_adaptbx/detectors/tst_memory.cpp sent 1,204 bytes received 34 bytes 2,476.00 bytes/sec total size is 967 speedup is 0.78 building file list ... done ccp4io_adaptbx/ ccp4io_adaptbx/dev/ ccp4io_adaptbx/dev/tst_fftlib.py sent 7,593 bytes received 44 bytes 15,274.00 bytes/sec total size is 9,205 speedup is 1.21 building file list ... done cctbx/adp_restraints/ cctbx/adptbx/ cctbx/adptbx/boost_python/ cctbx/adptbx/boost_python/tst_adptbx.py cctbx/adptbx/boost_python/tst_hirshfeld.py cctbx/array_family/ cctbx/array_family/boost_python/ cctbx/array_family/boost_python/tst_flex.py cctbx/covariance/ cctbx/covariance/tests/ cctbx/covariance/tests/tst_covariance.py cctbx/crystal/ cctbx/development/ cctbx/dispersion/ cctbx/dispersion/tests/ cctbx/dispersion/tests/tst_kramers_kronig.py cctbx/dispersion/tests/tst_kramers_kronig_helper.py cctbx/dispersion/tests/tst_kramers_kronig_optimize.py cctbx/dmtbx/ cctbx/dmtbx/boost_python/ cctbx/dmtbx/boost_python/tst_dmtbx.py cctbx/eltbx/ cctbx/eltbx/discamb/ cctbx/eltbx/discamb/tst_IAM_discamb_vs_cctbx_1.py cctbx/eltbx/discamb/tst_IAM_discamb_vs_cctbx_2.py cctbx/eltbx/discamb/tst_IAM_discamb_vs_cctbx_3.py cctbx/eltbx/discamb/tst_IAM_discamb_vs_cctbx_4.py cctbx/eltbx/discamb/tst_IAM_discamb_vs_cctbx_5.py cctbx/eltbx/tests/ cctbx/eltbx/tests/tst_attenuation_coefficient.py cctbx/eltbx/tests/tst_chemical_elements.py cctbx/eltbx/tests/tst_covalent_radii.py cctbx/eltbx/tests/tst_formula.py cctbx/eltbx/tests/tst_henke.py cctbx/eltbx/tests/tst_icsd_radii.py cctbx/eltbx/tests/tst_neutron.py cctbx/eltbx/tests/tst_sasaki.py cctbx/eltbx/tests/tst_tiny_pse.py cctbx/eltbx/tests/tst_wavelengths.py cctbx/eltbx/tests/tst_xray_scattering.py cctbx/examples/ cctbx/examples/merging/ cctbx/geometry/ cctbx/geometry/tests/ cctbx/geometry/tests/tst_geometry.py cctbx/geometry_restraints/ cctbx/maptbx/ cctbx/maptbx/boost_python/ cctbx/maptbx/boost_python/tst_maptbx.py cctbx/masks/ cctbx/masks/tests/ cctbx/masks/tests/tst_flood_fill.py cctbx/math/ cctbx/math/boost_python/ cctbx/math/boost_python/tst_math.py cctbx/miller/ cctbx/miller/boost_python/ cctbx/miller/boost_python/tst_miller.py cctbx/multipolar/ cctbx/multipolar/regression/ cctbx/multipolar/regression/tst_multipolar.py cctbx/omz/ cctbx/omz/tst_cod.csh cctbx/regression/ cctbx/sgtbx/ cctbx/sgtbx/boost_python/ cctbx/sgtbx/boost_python/tst_N_fold_rot.py cctbx/sgtbx/boost_python/tst_sgtbx.py cctbx/sgtbx/direct_space_asu/ cctbx/sgtbx/direct_space_asu/proto/ cctbx/sgtbx/direct_space_asu/proto/tst_asu.cpp cctbx/symmetry_search/ cctbx/symmetry_search/tests/ cctbx/symmetry_search/tests/tst_from_map.py cctbx/symmetry_search/tests/tst_goodness_of_symmetry.py cctbx/translation_search/ cctbx/translation_search/boost_python/ cctbx/translation_search/boost_python/tst_translation_search.py cctbx/uctbx/ cctbx/uctbx/boost_python/ cctbx/uctbx/boost_python/tst_crystal_orientation.py cctbx/uctbx/boost_python/tst_uctbx.py cctbx/uctbx/lrl/ cctbx/uctbx/lrl/tst_match_lattices.py cctbx/xray/ cctbx/xray/boost_python/ cctbx/xray/boost_python/tst_f_model.py cctbx/xray/boost_python/tst_targets_fd.py cctbx/xray/boost_python/tst_xray.py cctbx/xray/observations/ cctbx/xray/targets/ sent 465,261 bytes received 977 bytes 932,476.00 bytes/sec total size is 2,082,452 speedup is 4.47 building file list ... done cma_es/ sent 112 bytes received 19 bytes 262.00 bytes/sec total size is 3,008 speedup is 22.96 building file list ... done crys3d/regression/ sent 374 bytes received 15 bytes 778.00 bytes/sec total size is 41,841 speedup is 107.56 building file list ... done sent 683 bytes received 12 bytes 1,390.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done fable/test/ fable/test/tst_command_line.py fable/test/tst_io.py fable/test/tst_separate_files.py fable/test/tst_show_calls.py sent 12,908 bytes received 91 bytes 25,998.00 bytes/sec total size is 151,869 speedup is 11.68 building file list ... done sent 217 bytes received 12 bytes 458.00 bytes/sec total size is 8,108 speedup is 35.41 building file list ... done iotbx/bioinformatics/ iotbx/bioinformatics/test/ iotbx/bioinformatics/test/tst_alignment_as_hsearch.py iotbx/bioinformatics/test/tst_ebi_wu_blast_xml.py iotbx/bioinformatics/test/tst_local_blast.py iotbx/bioinformatics/test/tst_ncbi_blast_xml.py iotbx/ccp4_map/ iotbx/ccp4_map/tst_input.map iotbx/cif/ iotbx/cif/tests/ iotbx/cif/tests/tst_citations.py iotbx/cif/tests/tst_cod.py iotbx/cif/tests/tst_crystal_symmetry_builder.py iotbx/cif/tests/tst_geometry.py iotbx/cif/tests/tst_lex_parse_build.py iotbx/cif/tests/tst_model.py iotbx/cif/tests/tst_model_builder.py iotbx/cif/tests/tst_parser.py iotbx/cif/tests/tst_restraints.py iotbx/cif/tests/tst_ucif_examples_compilation.py iotbx/cif/tests/tst_validation.py iotbx/cns/ iotbx/detectors/ iotbx/dsn6/ iotbx/examples/ iotbx/examples/pdb_truncate_to_ala/ iotbx/examples/pdb_truncate_to_ala/tst.py iotbx/gui_tools/ iotbx/kriber/ iotbx/mtz/ iotbx/pdb/ iotbx/pdb/remediation/ iotbx/regression/ iotbx/regression/ncs/ iotbx/regression/secondary_structure/ iotbx/regression/secondary_structure/tst_annotation.py iotbx/regression/secondary_structure/tst_annotation_long.py iotbx/regression/secondary_structure/tst_sheet.py iotbx/scalepack/ iotbx/shelx/ iotbx/xds/ iotbx/xds/tests/ iotbx/xds/tests/tst_integrate_hkl.py iotbx/xds/tests/tst_spots_xds.py iotbx/xds/tests/tst_xds_inp.py iotbx/xds/tests/tst_xparm.py iotbx/xplor/ sent 276,474 bytes received 541 bytes 554,030.00 bytes/sec total size is 2,463,857 speedup is 8.89 building file list ... done libtbx/phil/ libtbx/queuing_system_utils/ sent 1,265 bytes received 18 bytes 2,566.00 bytes/sec total size is 252,704 speedup is 196.96 building file list ... done mmtbx/atomic_environment_vectors/ mmtbx/building/ mmtbx/building/ligands/ mmtbx/building/ligands/tst_00_mmtbx_building_ligands.map mmtbx/bulk_solvent/ mmtbx/chemical_components/ mmtbx/conformation_dependent_library/ mmtbx/density_modification/ mmtbx/disorder/ mmtbx/dynamics/ mmtbx/geometry/ mmtbx/geometry/tests/ mmtbx/geometry/tests/tst_altloc.py mmtbx/geometry/tests/tst_asa.py mmtbx/geometry/tests/tst_clash.py mmtbx/geometry/tests/tst_indexing.py mmtbx/geometry/tests/tst_shared_types.py mmtbx/geometry/tests/tst_sphere_surface_sampling.py mmtbx/geometry/tests/tst_topology.py mmtbx/geometry_restraints/ mmtbx/geometry_restraints/torsion_restraints/ mmtbx/hydrogens/ mmtbx/ias/ mmtbx/idealized_aa_residues/ mmtbx/ions/ mmtbx/ions/svm/ mmtbx/ligands/ mmtbx/maps/ mmtbx/masks/ mmtbx/masks/tst_mask.cpp mmtbx/max_lik/ mmtbx/monomer_library/ mmtbx/nci/ mmtbx/pair_interaction/ mmtbx/polygon/ mmtbx/probe/ mmtbx/probe/tst_probe.cpp mmtbx/real_space/ mmtbx/reduce/ mmtbx/refinement/ mmtbx/refinement/real_space/ mmtbx/regression/fix_cablam/ mmtbx/regression/fix_cablam/tst_basic_cl_operations.py mmtbx/regression/fix_cablam/tst_insertion_codes.py mmtbx/regression/fix_cablam/tst_one_resid_rotation.py mmtbx/regression/fix_cablam/tst_single_outliers_surroundings.py mmtbx/regression/model/ mmtbx/regression/model_idealization/ mmtbx/regression/model_idealization/tst_ext_map_01.py mmtbx/regression/model_idealization/tst_ligands.py mmtbx/regression/model_idealization/tst_nomap_01.py mmtbx/regression/model_idealization/tst_nomap_02.py mmtbx/regression/model_idealization/tst_nomap_03.py mmtbx/regression/model_idealization/tst_nomap_04.py mmtbx/regression/model_idealization/tst_with_mtz.py mmtbx/regression/model_idealization/tst_withmap_01.py mmtbx/regression/model_idealization/tst_withmap_02.py mmtbx/regression/model_idealization/tst_withmap_03.py mmtbx/regression/model_idealization/tst_withmap_04.py mmtbx/regression/model_idealization/tst_withmap_05.py mmtbx/regression/model_idealization/tst_withmap_06.py mmtbx/regression/mtz/ mmtbx/regression/mtz/tst_xtriage_fmodel.mtz mmtbx/regression/ncs/ mmtbx/regression/pdb_interpretation/ mmtbx/regression/pdb_interpretation/tst_custom_nb_sym_excl.py mmtbx/regression/pdb_interpretation/tst_edits.py mmtbx/regression/pdb_interpretation/tst_edits_actions.py mmtbx/regression/pdb_interpretation/tst_tardy_geo.py mmtbx/regression/pdb_interpretation/tst_using_ncs_1.py mmtbx/regression/pdb_interpretation/tst_using_ncs_2.py mmtbx/regression/real_space_refine_chain/ mmtbx/regression/real_space_refine_chain/tst_00.py mmtbx/regression/real_space_refine_chain/tst_01.py mmtbx/regression/tls/ mmtbx/regression/tncs/ mmtbx/regression/tncs/tst_epsfac_and_radius.py mmtbx/regression/tncs/tst_fd.py mmtbx/regression/tncs/tst_moments.py mmtbx/regression/tncs/tst_pair.py mmtbx/ringer/ mmtbx/rotamer/ mmtbx/rsr/ mmtbx/scaling/ mmtbx/secondary_structure/ mmtbx/secondary_structure/build/ mmtbx/utils/ mmtbx/validation/ mmtbx/validation/regression/ mmtbx/wwpdb/ sent 819,207 bytes received 930 bytes 1,640,274.00 bytes/sec total size is 7,316,132 speedup is 8.92 building file list ... done omptbx/ sent 91 bytes received 19 bytes 220.00 bytes/sec total size is 1,175 speedup is 10.68 building file list ... done rstbx/bpcx/ rstbx/bpcx/detector_model/ rstbx/cftbx/ rstbx/diffraction/ rstbx/diffraction/fastbragg/ rstbx/dps_core/ rstbx/indexing/ rstbx/simage/ rstbx/simulation/ rstbx/sublattice_support/ rstbx/viewer/ sent 1,041 bytes received 45 bytes 724.00 bytes/sec total size is 179,407 speedup is 165.20 building file list ... done scitbx/array_family/ scitbx/array_family/tst_accessors.cpp scitbx/array_family/tst_af_1.cpp scitbx/array_family/tst_af_2.cpp scitbx/array_family/tst_af_3.cpp scitbx/array_family/tst_af_4.cpp scitbx/array_family/tst_af_5.cpp scitbx/array_family/tst_af_helpers.cpp scitbx/array_family/tst_mat3.cpp scitbx/array_family/tst_optional_copy.cpp scitbx/array_family/tst_rectangular_full_packed.cpp scitbx/array_family/tst_ref_matrix_facet.cpp scitbx/array_family/tst_sym_mat3.cpp scitbx/array_family/tst_unsigned_float_arithmetic.cpp scitbx/array_family/tst_vec3.cpp scitbx/array_family/boost_python/ scitbx/array_family/boost_python/tst_cost_of_m_handle_in_af_shared.py scitbx/array_family/boost_python/tst_flex.py scitbx/array_family/boost_python/tst_flex_argument_passing.py scitbx/array_family/boost_python/tst_integer_offsets_vs_pointers.py scitbx/array_family/boost_python/tst_numpy_bridge.py scitbx/array_family/boost_python/tst_shared.py scitbx/array_family/boost_python/tst_smart_selection.py scitbx/dtmin/ scitbx/dtmin/regression/ scitbx/dtmin/regression/tst_dtmin_basic.py scitbx/dtmin/regression/tst_dtmin_booth.py scitbx/dtmin/regression/tst_dtmin_twisted.py scitbx/error/ scitbx/error/tst_error.cpp scitbx/error/tst_error.py scitbx/fftpack/ scitbx/fftpack/boost_python/ scitbx/fftpack/boost_python/tst_fftpack.py scitbx/fftpack/timing/ scitbx/fftpack/timing/tst3d.cpp scitbx/glmtbx/ scitbx/glmtbx/tests/ scitbx/glmtbx/tests/tst.py scitbx/graph/ scitbx/graphics_utils/ scitbx/iso_surface/ scitbx/iso_surface/tst_iso_surface.m scitbx/lbfgs/ scitbx/lbfgs/tst_lbfgs.cpp scitbx/lbfgsb/ scitbx/lbfgsb/boost_python/ scitbx/lbfgsb/boost_python/tst_fit_cdf.py scitbx/lbfgsb/boost_python/tst_lbfgsb.py scitbx/linalg/ scitbx/linalg/tests/ scitbx/linalg/tests/tst_cholesky.py scitbx/linalg/tests/tst_eigensystem.py scitbx/linalg/tests/tst_lapack_dsyev.py scitbx/linalg/tests/tst_lapack_svd.py scitbx/linalg/tests/tst_matrix.py scitbx/linalg/tests/tst_svd.py scitbx/lstbx/ scitbx/lstbx/tests/ scitbx/lstbx/tests/tst_normal_equations.nb scitbx/math/ scitbx/math/tests/ scitbx/math/tests/tst.cpp scitbx/matrix/ scitbx/matrix/tests/ scitbx/matrix/tests/tst_cholesky.cpp scitbx/matrix/tests/tst_givens.cpp scitbx/matrix/tests/tst_householder.cpp scitbx/matrix/tests/tst_householder.nb scitbx/matrix/tests/tst_householder.py scitbx/matrix/tests/tst_row_echelon.py scitbx/matrix/tests/tst_svd.cpp scitbx/matrix/tests/tst_svd.nb scitbx/matrix/tests/tst_svd_accuracy.nb scitbx/minpack/ scitbx/minpack/tst.py scitbx/python_utils/ scitbx/random/ scitbx/random/tests/ scitbx/random/tests/tst_random.py scitbx/rigid_body/ scitbx/rigid_body/essence/ scitbx/rigid_body/proto/ scitbx/serialization/ scitbx/serialization/tst_base_256.cpp scitbx/sparse/ scitbx/sparse/tests/ scitbx/sparse/tests/tst_lu_factorization.py scitbx/sparse/tests/tst_sparse.cpp scitbx/sparse/tests/tst_sparse.py scitbx/stl/ scitbx/suffixtree/ scitbx/suffixtree/test/ scitbx/suffixtree/test/tst_single.py scitbx/tests/ scitbx/tests/tst_basic.csh scitbx/tests/tst_basic.py scitbx/tests/tst_cubicle_neighbors.py scitbx/tests/tst_genetic_algorithm_with_mp.py scitbx/tests/tst_minimizer_lbfgs_general.py scitbx/tests/tst_r3_utils.py scitbx/tests/tst_regular_grid_on_unit_sphere.py scitbx/tests/tst_smoothing.py scitbx/wigner/ sent 678,840 bytes received 1,368 bytes 1,360,416.00 bytes/sec total size is 1,112,037 speedup is 1.63 building file list ... done sent 146 bytes received 12 bytes 316.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ab_initio/ smtbx/ab_initio/tests/ smtbx/absolute_structure/ smtbx/absolute_structure/tests/ smtbx/absolute_structure/tests/tst_absolute_structure.py smtbx/masks/ smtbx/masks/tests/ smtbx/masks/tests/tst_masks.py smtbx/refinement/ smtbx/refinement/constraints/ smtbx/refinement/constraints/tests/ smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.cpp smtbx/refinement/constraints/tests/tst_reparametrisation.cpp smtbx/refinement/constraints/tests/tst_special_position.cpp smtbx/refinement/restraints/ smtbx/refinement/restraints/tests/ smtbx/refinement/restraints/tests/tst_adp_restraints.py smtbx/refinement/restraints/tests/tst_manager.py smtbx/refinement/restraints/tests/tst_restraints.py smtbx/refinement/tests/ smtbx/refinement/tests/tst_least_squares.py smtbx/refinement/tests/tst_weighting_schemes.py smtbx/regression/ smtbx/structure_factors/ smtbx/structure_factors/direct/ smtbx/structure_factors/direct/tests/ smtbx/structure_factors/direct/tests/tst_standard_xray.py smtbx/tests/ smtbx/tests/tst_utils.py sent 144,525 bytes received 291 bytes 289,632.00 bytes/sec total size is 248,243 speedup is 1.71 building file list ... done spotfinder/core_toolbox/ spotfinder/core_toolbox/boost_python/ spotfinder/core_toolbox/boost_python/tst_small_image.py sent 5,467 bytes received 37 bytes 11,008.00 bytes/sec total size is 5,074 speedup is 0.92 building file list ... done tbxx/ tbxx/tests/ tbxx/tests/tst_pretty_type_name.cpp sent 489 bytes received 41 bytes 1,060.00 bytes/sec total size is 323 speedup is 0.61 building file list ... done wxtbx/regression/ wxtbx/regression/tst_process_control.py sent 2,012 bytes received 34 bytes 4,092.00 bytes/sec total size is 1,770 speedup is 0.87 building file list ... done ./ annlib_adaptbx/ annlib_adaptbx/tests/ annlib_adaptbx/tests/data.txt annlib_adaptbx/tests/query.txt cma_es/cma/ cma_es/cma/initials.par fable/fem/ fable/fem/major_types.hpp fable/test/sf_times.py fable/test/lenient/ fable/test/lenient/NOTE fable/test/lenient/calling_non_external_arg.f fable/test/lenient/str_blank_str.f fable/test/lenient/str_cont_line_str.f fable/test/semantic_error/ fable/test/semantic_error/assignment_to_parameter.f fable/test/semantic_error/calling_array.f fable/test/semantic_error/calling_dimension.f fable/test/semantic_error/common_equivalence.f fable/test/semantic_error/dimension_unknown_data_type.f fable/test/semantic_error/dims_repeated_in_common.f fable/test/semantic_error/dims_repeated_in_dimension.f fable/test/semantic_error/equivalence_external.f fable/test/semantic_error/external_array.f fable/test/semantic_error/external_common.f fable/test/semantic_error/function_data_type_decl_twice.f fable/test/semantic_error/function_name_is_also_arg.f fable/test/semantic_error/inquire_both_unit_and_file.f fable/test/semantic_error/inquire_no_unit_no_file.f fable/test/semantic_error/intrinsic_common.f fable/test/semantic_error/intrinsic_dimension.f fable/test/semantic_error/missing_include.f fable/test/semantic_error/parameter_array.f fable/test/semantic_error/parameter_in_common.f fable/test/semantic_error/parameter_in_sub_args.f fable/test/semantic_error/parameter_save.f fable/test/semantic_error/real_declared_twice.f fable/test/semantic_error/recursion_in_declaration.f fable/test/semantic_error/sub_fun_2.f fable/test/semantic_error/subroutine_name_is_also_arg.f fable/test/semantic_error/twice_in_sub_args.f fable/test/semantic_error/unknown_intrinsic.f fable/test/semantic_error/write_end.f fable/test/semantic_error/write_without_unit.f fable/test/syntax_error/ fable/test/syntax_error/bad_after_dot.f fable/test/syntax_error/bad_and.f fable/test/syntax_error/bad_complex_literal_1.f fable/test/syntax_error/bad_complex_literal_2.f fable/test/syntax_error/bad_data.f fable/test/syntax_error/bad_false.f fable/test/syntax_error/bad_format_1.f fable/test/syntax_error/bad_format_2.f fable/test/syntax_error/bad_format_3.f fable/test/syntax_error/bad_format_4.f fable/test/syntax_error/bad_format_5.f fable/test/syntax_error/bad_format_6.f fable/test/syntax_error/bad_format_7.f fable/test/syntax_error/bad_gt.f fable/test/syntax_error/bad_implied_do_1.f fable/test/syntax_error/bad_implied_do_2.f fable/test/syntax_error/bad_implied_do_3.f fable/test/syntax_error/bad_implied_do_4.f fable/test/syntax_error/bad_implied_do_5.f fable/test/syntax_error/bad_implied_do_6.f fable/test/syntax_error/bad_not.f fable/test/syntax_error/bad_not_2.f fable/test/syntax_error/bad_open_err_label.f fable/test/syntax_error/bad_or.f fable/test/syntax_error/bad_true.f fable/test/syntax_error/bare_data.f fable/test/syntax_error/bare_external.f fable/test/syntax_error/bare_integer_i.f fable/test/syntax_error/bare_print.f fable/test/syntax_error/closing_parenthesis_without_matching.f fable/test/syntax_error/common_with_data_size.f fable/test/syntax_error/data_plus_repetition.f fable/test/syntax_error/dimension_with_data_size.f fable/test/syntax_error/dot_e.f fable/test/syntax_error/duplicate_format_label.f fable/test/syntax_error/exclamation_mark_syndrome.f fable/test/syntax_error/format_without_label.f fable/test/syntax_error/fun_star.f fable/test/syntax_error/j_assign_i_percent_5.f fable/test/syntax_error/label_cont_char.f fable/test/syntax_error/label_empty.f fable/test/syntax_error/not_an_identifier.f fable/test/syntax_error/opening_parenthesis_without_matching.f fable/test/syntax_error/power_no_base.f fable/test/syntax_error/power_no_exponent.f fable/test/syntax_error/read_plus_name.f fable/test/syntax_error/read_star_comma_empty.f fable/test/syntax_error/read_star_name.f fable/test/syntax_error/save_bad_comma.f fable/test/syntax_error/save_num_comma_colon.f fable/test/syntax_error/save_num_val_colon.f fable/test/syntax_error/save_slash_slash.f fable/test/syntax_error/save_with_dims.f fable/test/syntax_error/sub_bad_comma.f fable/test/syntax_error/sub_bad_trailing.f fable/test/syntax_error/sub_no_name.f fable/test/syntax_error/sub_open_parenthesis.f fable/test/syntax_error/sub_percent_3.f fable/test/syntax_error/x_assign_1dotd.f fable/test/syntax_error/x_assign_1ex.f fable/test/syntax_error/x_assign_dot.f fable/test/syntax_error/x_assign_dot_2.f fable/test/unsupported/ 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fable/test/valid/subroutine_1.f fable/test/valid/subroutine_2.f fable/test/valid/subroutine_3.f fable/test/valid/subroutine_4.f fable/test/valid/subroutine_5.f fable/test/valid/subroutine_6.f fable/test/valid/subroutine_7.f fable/test/valid/subroutine_8.f fable/test/valid/subroutine_9.f fable/test/valid/subroutine_write_iunit.f fable/test/valid/subroutine_zero.f fable/test/valid/tab_syndrome.f fable/test/valid/triple_3d.f fable/test/valid/triple_3d_common.f fable/test/valid/unformatted_experiments.f fable/test/valid/unused_arg_implicit_none.f fable/test/valid/unused_args.f fable/test/valid/using_intrinsics.f fable/test/valid/write_1.f fable/test/valid/write_err.f fable/test/valid/write_extra_parentheses.f fable/test/valid/write_fmt_double.f fable/test/valid/write_format.f fable/test/valid/write_format_with_colon.f fable/test/valid/write_implied_do_1.f fable/test/valid/write_implied_do_2.f fable/test/valid/write_implied_do_3.f fable/test/valid/write_implied_do_4.f fable/test/valid/write_implied_do_5.f fable/test/valid/write_internal_file.f fable/test/valid/write_internal_file_2.f fable/test/valid/write_internal_file_3.f fable/test/valid/write_internal_file_4.f fable/test/valid/write_pow.f fable/test/valid/write_read_end_err_implied_do.f fable/test/valid/write_read_unformatted.f fable/test/valid/write_star.f fable/test/valid/write_star_real_star_4.f fable/test/valid/write_star_real_star_8.f iotbx/bioinformatics/test/alignment.pir iotbx/bioinformatics/test/ebi_blast.xml.gz iotbx/bioinformatics/test/ncbi_blast.xml.gz iotbx/ccp4_map/ccp4_20_21_22_to_30_40_50.ccp4 iotbx/examples/pdb_truncate_to_ala/crambin_pieces.pdb iotbx/examples/pdb_truncate_to_ala/resname_mix.pdb iotbx/examples/pdb_truncate_to_ala/tutorial.txt iotbx/examples/pdb_truncate_to_ala/v0_getting_started.py iotbx/examples/pdb_truncate_to_ala/v1_loop_over_atoms.py iotbx/examples/pdb_truncate_to_ala/v2_simple.py iotbx/examples/pdb_truncate_to_ala/v3_better.py iotbx/examples/pdb_truncate_to_ala/v4_with_bells_and_whistles.py iotbx/regression/data/ iotbx/regression/data/1yjp.pdb iotbx/regression/data/2ERL.pdb iotbx/regression/data/D7.ccp4 iotbx/regression/data/big_cube_model.pdb iotbx/regression/data/cu3182Isup2.hkl iotbx/regression/data/cu3182sup1.cif iotbx/regression/data/insulin_unmerged_cutted_from_ccp4.mtz iotbx/regression/data/mmma.ccp4 iotbx/regression/data/mmmab.ccp4 iotbx/regression/data/mmmb.ccp4 iotbx/regression/data/non_zero_origin_map.ccp4 iotbx/regression/data/non_zero_origin_model.cif iotbx/regression/data/non_zero_origin_model.pdb iotbx/regression/data/non_zero_origin_model_split.cif iotbx/regression/data/non_zero_origin_model_split.pdb iotbx/regression/data/non_zero_origin_ncs_model.cif iotbx/regression/data/non_zero_origin_ncs_model.pdb iotbx/regression/data/non_zero_origin_ncs_spec.ncs_spec iotbx/regression/data/pdb1zff.ent iotbx/regression/data/phaser_1.mtz iotbx/regression/data/shelx.ins iotbx/xds/tests/INTEGRATE.HKL iotbx/xds/tests/NEW_XPARM.XDS iotbx/xds/tests/XDS.INP iotbx/xds/tests/XDS_2.INP iotbx/xds/tests/XPARM.XDS libtbx/citations.params mmtbx/regression/pdbs/ mmtbx/regression/pdbs/1ucs_cutted_xyz_rounded.pdb mmtbx/regression/pdbs/1yjp_h.pdb mmtbx/regression/pdbs/AF_json_v3.cif mmtbx/regression/pdbs/AF_json_v3.pdb mmtbx/regression/pdbs/Fe_1brf_snip_reduced.pdb mmtbx/regression/pdbs/fibronectin_af_ca_1358_1537.cif mmtbx/regression/pdbs/fibronectin_af_ca_1358_1537.pdb mmtbx/regression/pdbs/ligand_before_prot.pdb mmtbx/regression/pdbs/one_chain_ligand_water.pdb mmtbx/regression/pdbs/p9.pdb mmtbx/regression/pdbs/pae.pdb mmtbx/regression/pdbs/pae_model.cif mmtbx/regression/pdbs/pae_model.pdb mmtbx/regression/pdbs/test1.cif mmtbx/regression/pdbs/two_chains.pdb mmtbx/regression/pdbs/two_chains_ligand_water.pdb rstbx/indexing/results2.dat rstbx/indexing/si_brief.dat rstbx/indexing/si_synthetic.dat scitbx/array_family/boost_python/regression_test.py scitbx/tests/differential_evolution.py scitbx/tests/direct_search_simulated_annealing.py scitbx/tests/golden_section_search.py scitbx/tests/simplex.py smtbx/regression/test_data/ smtbx/regression/test_data/sucrose_p1.res smtbx/regression/test_data/thpp.cif smtbx/regression/test_data/thpp.hkl smtbx/regression/test_data/thpp.ins sent 5,033,166 bytes received 8,885 bytes 3,361,367.33 bytes/sec total size is 4,971,820 speedup is 0.99 make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' dh_install -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0//usr/lib/aarch64-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libcbf-private.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libccp4io.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libomptbx.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/librstbx.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/tmp/usr/lib/aarch64-linux-gnu/libspotfinder.so.0 debian/tmp/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0//usr/lib/aarch64-linux-gnu/ install -m0755 -d debian/libcctbx-dev//usr cp --reflink=auto -a debian/tmp/usr/include/ debian/libcctbx-dev//usr/ install -m0755 -d debian/libcctbx-dev//usr/lib/aarch64-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/aarch64-linux-gnu/libann_adaptor.so debian/tmp/usr/lib/aarch64-linux-gnu/libasymmetric_map.so debian/tmp/usr/lib/aarch64-linux-gnu/libcbf-private.so debian/tmp/usr/lib/aarch64-linux-gnu/libccp4io.so debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx.so debian/tmp/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so debian/tmp/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so debian/tmp/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so debian/tmp/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so debian/tmp/usr/lib/aarch64-linux-gnu/libomptbx.so debian/tmp/usr/lib/aarch64-linux-gnu/librstbx.so debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so debian/tmp/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so debian/tmp/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so debian/tmp/usr/lib/aarch64-linux-gnu/libspotfinder.so debian/libcctbx-dev//usr/lib/aarch64-linux-gnu/ install -m0755 -d debian/python3-cctbx//usr cp --reflink=auto -a debian/tmp/usr/bin debian/python3-cctbx//usr/ install -m0755 -d debian/python3-cctbx//usr/lib cp --reflink=auto -a debian/tmp/usr/lib/cctbx debian/tmp/usr/lib/python3.13 debian/python3-cctbx//usr/lib/ dh_installdocs -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/share/doc/libcctbx0 install -p -m0644 debian/copyright debian/libcctbx0/usr/share/doc/libcctbx0/copyright install -m0755 -d debian/libcctbx-dev/usr/share/doc/libcctbx-dev install -p -m0644 debian/copyright debian/libcctbx-dev/usr/share/doc/libcctbx-dev/copyright install -m0755 -d debian/python3-cctbx/usr/share/doc/python3-cctbx install -p -m0644 debian/copyright debian/python3-cctbx/usr/share/doc/python3-cctbx/copyright dh_installchangelogs -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/share/doc/libcctbx0 install -p -m0644 debian/.debhelper/generated/libcctbx0/dh_installchangelogs.dch.trimmed debian/libcctbx0/usr/share/doc/libcctbx0/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/libcctbx0/usr/share/doc/libcctbx0/changelog install -m0755 -d debian/libcctbx-dev/usr/share/doc/libcctbx-dev install -p -m0644 debian/.debhelper/generated/libcctbx-dev/dh_installchangelogs.dch.trimmed debian/libcctbx-dev/usr/share/doc/libcctbx-dev/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/libcctbx-dev/usr/share/doc/libcctbx-dev/changelog install -m0755 -d debian/python3-cctbx/usr/share/doc/python3-cctbx install -p -m0644 debian/.debhelper/generated/python3-cctbx/dh_installchangelogs.dch.trimmed debian/python3-cctbx/usr/share/doc/python3-cctbx/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/python3-cctbx/usr/share/doc/python3-cctbx/changelog dh_python3 -a -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20250414 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-a', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=True, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.13 (default=3.13) D: dh_python3 debhelper:166: skipping package libcctbx0 (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:166: skipping package libcctbx-dev (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:174: source=cctbx, binary packages=['python3-cctbx'] D: dh_python3 dh_python3:205: processing package python3-cctbx... D: dh_python3 fs:50: moving files from debian/python3-cctbx/usr/lib/python3.13/dist-packages to debian/python3-cctbx/usr/lib/python3/dist-packages/ D: dh_python3 tools:232: invoking: /usr/bin/python3.13 -c 'import sysconfig as s; print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' I: dh_python3 fs:421: renaming iotbx_pdb_hierarchy_ext.so to iotbx_pdb_hierarchy_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_wigner_ext.so to scitbx_wigner_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_rational_ext.so to boost_rational_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_wildcard_ext.so to iotbx_wildcard_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_viewer_utils_ext.so to gltbx_viewer_utils_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_util_ext.so to gltbx_util_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_ext.so to boost_adaptbx_graph_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_python_meta_ext.so to boost_python_meta_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming std_pair_ext.so to std_pair_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_sphere_surface_sampling_ext.so to mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_maximum_clique_ext.so to boost_adaptbx_graph_maximum_clique_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_utility_ext.so to boost_adaptbx_graph_utility_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_probe_ext.so to mmtbx_probe_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_covalent_radii_ext.so to cctbx_eltbx_covalent_radii_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_glu_ext.so to gltbx_glu_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_bandpass_ext.so to rstbx_bandpass_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_glmtbx_ext.so to scitbx_glmtbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_utils_ext.so to mmtbx_utils_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_array_family_flex_ext.so to scitbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_suffixtree_single_ext.so to scitbx_suffixtree_single_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_masks_ext.so to cctbx_masks_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_indexing_api_ext.so to rstbx_indexing_api_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_pdb_ext.so to iotbx_pdb_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_python_hybrid_times_ext.so to boost_python_hybrid_times_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_hydrogens_ext.so to mmtbx_hydrogens_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_alignment_ext.so to mmtbx_alignment_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_ext.so to dxtbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_map_ext.so to scitbx_stl_map_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_statistics_ext.so to cctbx_statistics_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_optimise_amplitudes_ext.so to mmtbx_tls_optimise_amplitudes_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_sparse_ext.so to scitbx_sparse_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_clash_ext.so to mmtbx_geometry_clash_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_refinement_restraints_ext.so to smtbx_refinement_restraints_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lbfgsb_ext.so to scitbx_lbfgsb_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_graphics_utils_ext.so to scitbx_graphics_utils_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_stl_map_ext.so to smtbx_stl_map_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_secondary_structure_ext.so to mmtbx_secondary_structure_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_rsr_ext.so to mmtbx_rsr_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_connected_component_algorithm_ext.so to boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_xplor_ext.so to iotbx_xplor_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_sgtbx_asu_ext.so to cctbx_sgtbx_asu_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_multipolar_ext.so to cctbx_multipolar_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_masks_ext.so to mmtbx_masks_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_ext.so to rstbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_array_family_flex_ext.so to rstbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ncs_cartesian_restraints_ext.so to mmtbx_ncs_cartesian_restraints_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_wavelengths_ext.so to cctbx_eltbx_wavelengths_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_cif_ext.so to iotbx_cif_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming ccp4io_adaptbx_ext.so to ccp4io_adaptbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_bulk_solvent_ext.so to mmtbx_bulk_solvent_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_simage_ext.so to rstbx_simage_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_sasaki_ext.so to cctbx_eltbx_sasaki_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_chemical_elements_ext.so to cctbx_eltbx_chemical_elements_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_ext.so to mmtbx_tls_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_scaling_ext.so to mmtbx_scaling_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_array_family_flex_ext.so to cctbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_random_ext.so to scitbx_random_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_maptbx_ext.so to cctbx_maptbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_orientation_ext.so to cctbx_orientation_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_shelx_ext.so to iotbx_shelx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_imageset_ext.so to dxtbx_imageset_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_utils_ext.so to mmtbx_tls_utils_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_indexing_ext.so to mmtbx_geometry_indexing_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_geometry_ext.so to cctbx_geometry_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_xray_observations_ext.so to cctbx_xray_observations_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_primitive_ext.so to mmtbx_geometry_primitive_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_icsd_radii_ext.so to cctbx_eltbx_icsd_radii_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_format_nexus_ext.so to dxtbx_format_nexus_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_gl_ext.so to gltbx_gl_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_dmtbx_ext.so to cctbx_dmtbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_math_ext.so to cctbx_math_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_iso_surface_ext.so to scitbx_iso_surface_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_emma_ext.so to cctbx_emma_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_python_streambuf_test_ext.so to boost_adaptbx_python_streambuf_test_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_sgtbx_ext.so to cctbx_sgtbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cbflib_ext.so to cbflib_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_rigid_body_ext.so to scitbx_rigid_body_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cma_es_ext.so to cma_es_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_asa_ext.so to mmtbx_geometry_asa_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_refinement_least_squares_ext.so to smtbx_refinement_least_squares_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ncs_ext.so to mmtbx_ncs_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_minpack_ext.so to scitbx_minpack_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_henke_ext.so to cctbx_eltbx_henke_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming fable_ext.so to fable_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_attenuation_coefficient_ext.so to cctbx_eltbx_attenuation_coefficient_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lbfgs_ext.so to scitbx_lbfgs_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_integration_ext.so to rstbx_integration_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_linalg_ext.so to scitbx_linalg_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_refinement_constraints_ext.so to smtbx_refinement_constraints_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ramachandran_restraints_ext.so to mmtbx_ramachandran_restraints_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_geometry_restraints_ext.so to cctbx_geometry_restraints_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_graph_structure_comparison_ext.so to boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_scalepack_ext.so to iotbx_scalepack_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_hough_ext.so to spotfinder_hough_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_crystal_ext.so to cctbx_crystal_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_covariance_ext.so to cctbx_covariance_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_uctbx_ext.so to cctbx_uctbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_detectors_bruker_ext.so to iotbx_detectors_bruker_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_decompose_ext.so to mmtbx_tls_decompose_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_french_wilson_ext.so to cctbx_french_wilson_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_dtrek_ext.so to iotbx_dtrek_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_anharmonic_ext.so to cctbx_anharmonic_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_bpcx_detector_model_ext.so to rstbx_bpcx_detector_model_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_quadrics_ext.so to gltbx_quadrics_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_breadth_first_search_ext.so to boost_adaptbx_graph_breadth_first_search_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_suffixtree_shared_ext.so to scitbx_suffixtree_shared_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_fp_fdp_ext.so to cctbx_eltbx_fp_fdp_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_fonts_ext.so to gltbx_fonts_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_cubicle_neighbors_ext.so to scitbx_cubicle_neighbors_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_structure_factors_direct_ext.so to smtbx_structure_factors_direct_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_fftpack_ext.so to scitbx_fftpack_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_asymmetric_map_ext.so to cctbx_asymmetric_map_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_adptbx_ext.so to cctbx_adptbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_math_ext.so to scitbx_math_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_building_loop_closure_ext.so to mmtbx_building_loop_closure_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_symmetry_search_ext.so to cctbx_symmetry_search_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_ccp4_map_ext.so to iotbx_ccp4_map_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_masking_ext.so to dxtbx_masking_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_translation_search_ext.so to cctbx_translation_search_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_maptbx_bcr_bcr_ext.so to cctbx_maptbx_bcr_bcr_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_dxtbx_ext.so to spotfinder_dxtbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_vector_ext.so to scitbx_stl_vector_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_flumpy.so to dxtbx_flumpy.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_set_ext.so to scitbx_stl_set_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_max_lik_ext.so to mmtbx_max_lik_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_shared_types_ext.so to mmtbx_geometry_shared_types_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming omptbx_ext.so to omptbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_reference_coordinate_ext.so to mmtbx_reference_coordinate_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_den_restraints_ext.so to mmtbx_den_restraints_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_pair_interaction_ext.so to mmtbx_pair_interaction_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_rotamer_fit_ext.so to mmtbx_rotamer_fit_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_metric_ext.so to boost_adaptbx_graph_metric_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_array_family_shared_ext.so to scitbx_array_family_shared_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_optional_ext.so to boost_optional_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_xray_scattering_ext.so to cctbx_eltbx_xray_scattering_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_validation_ramachandran_ext.so to mmtbx_validation_ramachandran_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_reduce_ext.so to mmtbx_reduce_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_simulation_ext.so to rstbx_simulation_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming regression_test_ext.so to regression_test_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_detectors_ext.so to iotbx_detectors_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_adp_restraints_ext.so to cctbx_adp_restraints_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_dssp_ext.so to mmtbx_dssp_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_neutron_ext.so to cctbx_eltbx_neutron_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_mtz_ext.so to iotbx_mtz_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming determine_unit_cell_ext.so to determine_unit_cell_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_boost_thread_test_ext.so to boost_adaptbx_boost_thread_test_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_ab_initio_ext.so to smtbx_ab_initio_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_format_image_ext.so to dxtbx_format_image_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_clustering_algorithm_ext.so to boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_dynamics_ext.so to mmtbx_dynamics_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_min_cut_max_flow_ext.so to boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_miller_ext.so to cctbx_miller_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_diffraction_fastbragg_ext.so to rstbx_diffraction_fastbragg_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_symmetry_constraints_ext.so to rstbx_symmetry_constraints_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_tiny_pse_ext.so to cctbx_eltbx_tiny_pse_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_xray_ext.so to cctbx_xray_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming boost_tuple_ext.so to boost_tuple_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_array_family_ext.so to smtbx_array_family_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lstbx_normal_equations_ext.so to scitbx_lstbx_normal_equations_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_distltbx_ext.so to spotfinder_distltbx_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_mosaic_ext.so to mmtbx_mosaic_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming annlib_ext.so to annlib_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_merging_ext.so to cctbx_merging_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_r3_utils_ext.so to scitbx_r3_utils_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_dsn6_map_ext.so to iotbx_dsn6_map_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_array_family_flex_ext.so to spotfinder_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_f_model_ext.so to mmtbx_f_model_ext.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_model_ext.so to dxtbx_model_ext.cpython-313-aarch64-linux-gnu.so D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prune_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.matthews): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_distances): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rotalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_residue_in_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_old_style_classes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_repository_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.export_scalepack_unmerged): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.resolution): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_peaks_holes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.hbond): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.ramalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_module_dependencies): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.validate_ligands): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_pickled_function): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLinfo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.reflection_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.angle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.parallel_simple): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.multiplicity_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_sizes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numeric_version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.add_from_future_import_division): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.gdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numpy_version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_accumulation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_options): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mon_lib_cif_triage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.split_data_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.remove_outliers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.distance_least_squares): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wxpython): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.hydrogenate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_sphinx_html): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rank_scale_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.latex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rotalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.analyse_code_comments): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_matching_images): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_exe): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.probescore_ligand): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.unique_with_biomt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image2pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_process): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.easy_qsub): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_header): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.try_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_selfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.mtrix_reconstruction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.select_best_starting_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_contains_strings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.reduce2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.ramalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.plot_detector_models): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.crystal_symmetry_from_any): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_windows_exe): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.fem_include_search_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.distance_difference): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_atoms_by_name): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/sphinx.build): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.inspect_r_free_flags): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ribbons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.bfactor_plot): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.flip_symmetric_amino_acids): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.solver): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz2map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.search_pdb_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_vs_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.emringer_score): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_correlation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.csh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.resource_monitor_plot): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.prime_factors_of): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bootstrap): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.debug_memory): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rigid_bond_test): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.benchmark_refinement): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.overload): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.print_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.cod_select_and_pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.insert_write_at_start_of_each_procedure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mp_geo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_exp_times): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.absolute_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_dist): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.unpack_in_sources): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_qstat_counts): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dtrek.to_cns): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.unique_with_biomt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.env_run): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.merging_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz_as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.grow_density): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_available_slots): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.phil): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.segment_and_split_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.perigee): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install_conda): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.example_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.mp_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.chunk): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.model_vs_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.kinemage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.polder): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.printenv): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_as_cns): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sisa): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.wait_for_file): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_host_and_user): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_tls_groups): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.subgroups): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.refine_anomalous_substructure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clear_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.nested_cpp_loops_with_check_signals): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_interpretation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.dtrace): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.apply_tapenade_hints): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.data_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fmodel): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_reticular_twin_laws): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fobs_minus_fobs_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.box_around_molecule): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.anomalous_differences_histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_file_converter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cbf_read): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.estimate_bijvoet_ratio): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.scale): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_cif_conversion): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mask): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.ligand_restraints_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cablam): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.molprobity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.superpose): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_reserved_names): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.helix_sheet_recs_as_pdb_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.nequal): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.read): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbf.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.model_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_source_files_sorted_by_size): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.altloc_remediate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.form_factor_query): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.data_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.raise_exception_for_testing): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_include_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_unused_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_line_count): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.brehm_diederichs): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.check_libcpp): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.fetch_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.dump_as_python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_under_build): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.find_distances): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.aev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.visualize_r_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_diff_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cbetadev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.exec): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.signal_strength): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emma): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/labelit.png): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.lattice_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_interpretation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.patterson_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.chiral_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_all_on_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cc_star): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_ext): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.epydoc_run): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.transfer_crystal_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_comparison): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bibtex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.models_as_chains): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.dynamics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.segmentation_fault): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rama_z): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cns_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.help): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xmanip): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_selfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.refine): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_systematic_absences): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_as_xyz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_number_of_processors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_calls): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.csv_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_env): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_variable_names): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.development.xtrapol8): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_suites): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_tree): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.blast_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_peaks_holes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_file_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.phil): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.depends_on): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.inexact): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_atom_selection): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_install_script_bat): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_cctbx_bundle_for_installer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.configure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.anom_refine): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_blobs): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_bin_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.symmetry_search): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.eltbx.show_fp_fdp): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_sys_executable): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.seconds_since_the_epoch): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clean_clutter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_registry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ss_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.tst_memory): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_rotarama_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.space_group_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_model_distances): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.file_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reindex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_training): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_commands): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports_crude): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.explore_completeness): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.comparama): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.valgrind): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.split): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.sweep_strength): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_platform_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.r_factor_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fft): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_box): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_mac_app): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_editor): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.omegalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wavelength_units): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_remediator): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.scons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.radial_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.git_avoid_merges): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.add_conformations): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_regression.test_nightly): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.super): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remote_processing): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.electrons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emringer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.qttbx.view_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.wx_display): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.process_predicted_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_diff): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.saturation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.lcm): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.geometry_minimization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.verify_mon_lib_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.precession_view): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_comparison): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cbetadev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_matching_formats): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.merging_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_r_factors_by_shell): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_unzipsfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.masks): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.water_b_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_full_command_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.int_overflow): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.process_predicted_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_pdb_mmcif_problems): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.show_connectivity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.auto_sharpen): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.arginine_geometry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.get_pubmed_citation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_cablam_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.french_wilson): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.structure_factor_timings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.insert_scale_records): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.install_format): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rama_z): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.qscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.thin_client): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.explore_metric_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.dlsnxs2cbf): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage_gui): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.nonbonded_overlaps): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.sdb_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.chiral_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.any2unix): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.xplor.map.show_summary): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.refresh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_structure_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.make_install_HKLviewer_ChimeraX): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.euclidean_model_matching): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bash): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_restraints): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.density_modification): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_but_no_repr): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.compare_datasets): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.generate_error_h): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.omegalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ringer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.probe2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.link_as_geometry_restraints_edits): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.build_phil_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fake_f_obs): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.any2nexus): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.b_factor_stats): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.web.install): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.tcsh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.getting_started): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.diffuse): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_miller_arrays): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image2pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.read_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_pythonpath): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_modules): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.plot_anomalous_scattering): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_converter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.pdflatex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.mp_spotfinder_server_read_file): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maximum_entropy_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mp_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.unicode_examples): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prepare_pdb_deposition): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.create): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.simple_map_coefficients): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.table_one): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.path_utility): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.find_active_area): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.quantum_interface): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.molprobity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.display_parallax_correction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.index): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.emma): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_suites): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dano_as_amplitudes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_model_histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.hierarchy): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_centers_of_mass): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.split_models): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_clutter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maps): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLinfo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_editor): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_tests): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_completion_simple): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.cout): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.line_count): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_date_and_time): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_tests_parallel): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_does_not_contain_strings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fetch_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.massage_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.biomt_reconstruction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_not_show_diff): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.validation_summary): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fab_elbow_angle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.join): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.detector_superpose): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reciprocal_space_arrays): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.validate_H): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.sort_atoms): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.gcd): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.apply_ncs_to_ligand): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.poscar_as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.kinemage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_ends_with): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_dependencies): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_as_fasta): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.fft): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sort_hetatms): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.mtz.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.feature_enhanced_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_in_repositories): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.get_citation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_mask_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.french_wilson): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_installer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.join_fragment_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.extract_code_from_txt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.loggraph): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.py_compile_all): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_binary_bundle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.divide_by_zero): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_untested): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.double_overflow): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdbtools): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_lib_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fem): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phasertng.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.f000): doesn't look like a shebang: #! /bin/sh D: dh_python3 fs:338: package python3-cctbx details = {'requires.txt': {'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/requires.txt'}, 'egg-info': {'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/PKG-INFO', 'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx-3.23.0.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.13')}, 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-cctbx D: dh_python3 pydist:175: trying to find dependency for PIL (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for h5py (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:277: dependency: included in build-deps with limits D: dh_python3 pydist:175: trying to find dependency for hdf5plugin (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for matplotlib (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for mrcfile (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for natsort (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for numpy (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for nxmx (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for ordered_set (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pint (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for procrunner (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pymol (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for requests (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for scipy (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for six (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for tqdm (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for wxPython (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 depends:253: D={'python3:any', 'python3-pymol', 'python3 (<< 3.14)', 'python3-six', 'python3-tqdm', 'python3-mrcfile', 'python3-nxmx', 'python3-pil', 'python3-h5py (>= 3)', 'python3-wxgtk4.0', 'python3-hdf5plugin', 'python3-scipy', 'python3-pint', 'python3-requests', 'python3 (>= 3.13~)', 'python3-numpy', 'python3-natsort', 'python3-matplotlib', 'python3-ordered-set', 'python3-procrunner'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -a -O--buildsystem=pybuild dh_lintian -a -O--buildsystem=pybuild install -m0755 -d debian/python3-cctbx/usr/share/lintian/overrides install -p -m0644 debian/python3-cctbx.lintian-overrides debian/python3-cctbx/usr/share/lintian/overrides/python3-cctbx dh_perl -a -O--buildsystem=pybuild rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_link make[1]: Entering directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' dh_auto_build -- -s custom --build-args="dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include" pybuild --build -i python{version} -p 3.13 -s custom --build-args="dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include" I: pybuild base:311: dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python3.13/include rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so ln -s libscitbx_boost_python.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libomptbx.so ln -s libomptbx.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libomptbx.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libccp4io.so ln -s libccp4io.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libccp4io.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so ln -s libmmtbx_masks.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so ln -s libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so ln -s libmmtbx_tls.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libspotfinder.so ln -s libspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libspotfinder.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so ln -s libiotbx_mtz.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so ln -s libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so ln -s libscitbx_minpack.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libann_adaptor.so ln -s libann_adaptor.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libann_adaptor.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/librstbx.so ln -s librstbx.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/librstbx.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcctbx.so ln -s libcctbx.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcctbx.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so ln -s libiotbx_pdb.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libasymmetric_map.so ln -s libasymmetric_map.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libasymmetric_map.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so ln -s libdxtbxspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so ln -s libiotbx_xplor.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcbf-private.so ln -s libcbf-private.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libcbf-private.so rm -f debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so ln -s libscitbx_slatec.so.0.0.1 debian/libcctbx-dev/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so install -m0755 -d debian/libcctbx-dev/usr/lib/cctbx/python3.13 rm -f debian/libcctbx-dev/usr/lib/cctbx/python3.13/include ln -s ../../../include/cctbx debian/libcctbx-dev/usr/lib/cctbx/python3.13/include make[1]: Leaving directory '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' dh_strip_nondeterminism -a -O--buildsystem=pybuild Using 1761327529 as canonical time Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ebi_blast.xml.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ncbi_blast.xml.gz using File::StripNondeterminism::handlers::gzip dh_compress -a -O--buildsystem=pybuild cd debian/libcctbx-dev cd debian/libcctbx0 cd debian/python3-cctbx chmod a-x usr/share/doc/libcctbx-dev/changelog usr/share/doc/libcctbx-dev/changelog.Debian chmod a-x usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian gzip -9nf usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian gzip -9nf usr/share/doc/libcctbx-dev/changelog usr/share/doc/libcctbx-dev/changelog.Debian chmod a-x usr/share/doc/python3-cctbx/changelog usr/share/doc/python3-cctbx/changelog.Debian cd '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' cd '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' gzip -9nf usr/share/doc/python3-cctbx/changelog usr/share/doc/python3-cctbx/changelog.Debian cd '/build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1' dh_fixperms -a -O--buildsystem=pybuild find debian/libcctbx0 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-cctbx ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcctbx-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcctbx0/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx0/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx0/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcctbx-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx0 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcctbx0/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libcctbx-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-cctbx/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python3-cctbx/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-cctbx/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-cctbx/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/lib/debug/.dwz/aarch64-linux-gnu dwz -mdebian/libcctbx0/usr/lib/debug/.dwz/aarch64-linux-gnu/libcctbx0.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/libcctbx0.debug -- debian/libcctbx0/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 install -m0755 -d debian/python3-cctbx/usr/lib/debug/.dwz/aarch64-linux-gnu dwz -mdebian/python3-cctbx/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-cctbx.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-cctbx.debug -- debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cctbx.find_distances debian/python3-cctbx/usr/bin/cctbx.getting_started debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-aarch64-linux-gnu.so objcopy --compress-debug-sections debian/libcctbx0/usr/lib/debug/.dwz/aarch64-linux-gnu/libcctbx0.debug chmod 0644 -- debian/libcctbx0/usr/lib/debug/.dwz/aarch64-linux-gnu/libcctbx0.debug objcopy --compress-debug-sections debian/python3-cctbx/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-cctbx.debug chmod 0644 -- debian/python3-cctbx/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-cctbx.debug dh_strip -a -O--buildsystem=pybuild install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d/4d4a2d3e8d8aadfaf0c85e97a8cdd8b1d6cf18.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd/9b85221b3ca440c152ea275fab70522094b396.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd/9b85221b3ca440c152ea275fab70522094b396.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/dd/9b85221b3ca440c152ea275fab70522094b396.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7e/5caa78f964c957b3885bded033e6247c4cf054.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d/4d4a2d3e8d8aadfaf0c85e97a8cdd8b1d6cf18.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d/4d4a2d3e8d8aadfaf0c85e97a8cdd8b1d6cf18.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9a/5e3044aa965861d92ecb6134de5a9b24895f25.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9a/5e3044aa965861d92ecb6134de5a9b24895f25.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9a/5e3044aa965861d92ecb6134de5a9b24895f25.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fd objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fd/9dcac506af1011b4fded922a28cd02d5e62ab9.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fd/9dcac506af1011b4fded922a28cd02d5e62ab9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fd/9dcac506af1011b4fded922a28cd02d5e62ab9.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d/a01bc76df178a4c91c90245c484d95ef2dfcc1.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d/a01bc76df178a4c91c90245c484d95ef2dfcc1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0d/a01bc76df178a4c91c90245c484d95ef2dfcc1.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0c objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0c/afea64204b90c9b31e433848a992ef80e887bf.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0c/afea64204b90c9b31e433848a992ef80e887bf.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/0c/afea64204b90c9b31e433848a992ef80e887bf.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f/2e55bdc4eb3f7c4906b53a113ccb49023e8e9d.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f/2e55bdc4eb3f7c4906b53a113ccb49023e8e9d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/6f/2e55bdc4eb3f7c4906b53a113ccb49023e8e9d.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25/a475e4ac49f117c5cce9db51f3977d4c13dc46.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25/a475e4ac49f117c5cce9db51f3977d4c13dc46.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/25/a475e4ac49f117c5cce9db51f3977d4c13dc46.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/35 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/35/b8d88d46ce42e23b0e342eb1b5385ae44be197.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/35/b8d88d46ce42e23b0e342eb1b5385ae44be197.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/35/b8d88d46ce42e23b0e342eb1b5385ae44be197.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/eb objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/eb/58622dc1e64d09adabfb5df2c69d5a5139f084.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/eb/58622dc1e64d09adabfb5df2c69d5a5139f084.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/eb/58622dc1e64d09adabfb5df2c69d5a5139f084.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cc objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cc/25063d831d6cfb11fc27d15fdbe86e8184983b.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cc/25063d831d6cfb11fc27d15fdbe86e8184983b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cc/25063d831d6cfb11fc27d15fdbe86e8184983b.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/d2050414411f11f3ac0cec16150e3ca78e3147.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/d2050414411f11f3ac0cec16150e3ca78e3147.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/d2050414411f11f3ac0cec16150e3ca78e3147.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/78 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/78/e3a204d1b5cfef7a843937eea3328f66ca6cef.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7e/5caa78f964c957b3885bded033e6247c4cf054.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7e/5caa78f964c957b3885bded033e6247c4cf054.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-aarch64-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/78/e3a204d1b5cfef7a843937eea3328f66ca6cef.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/78/e3a204d1b5cfef7a843937eea3328f66ca6cef.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/8ec818e2a8aef469e456320fff8e209a5c6203.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1f/c94d1a1ea10bfa27403a6955f184f8715ced72.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1f/c94d1a1ea10bfa27403a6955f184f8715ced72.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1f/c94d1a1ea10bfa27403a6955f184f8715ced72.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40/27d192ee3cd5c97d2e0ac4f112d7541e7de020.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40/27d192ee3cd5c97d2e0ac4f112d7541e7de020.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40/27d192ee3cd5c97d2e0ac4f112d7541e7de020.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9/2b42b58c0e780a5fadf7593ccf522851ef6821.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9/2b42b58c0e780a5fadf7593ccf522851ef6821.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f9/2b42b58c0e780a5fadf7593ccf522851ef6821.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/d6bf0ddad1cf9ab4ba5e356e8ce312daf15b12.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/8ec818e2a8aef469e456320fff8e209a5c6203.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/11/8ec818e2a8aef469e456320fff8e209a5c6203.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/16 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/16/0eee3a0a79ac061fdc3a16ead64b169795f1c2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/d6bf0ddad1cf9ab4ba5e356e8ce312daf15b12.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8b/d6bf0ddad1cf9ab4ba5e356e8ce312daf15b12.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75/f9193c5ed0c4b6f938c4cfae9c2affcd8711f0.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/16/0eee3a0a79ac061fdc3a16ead64b169795f1c2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/16/0eee3a0a79ac061fdc3a16ead64b169795f1c2.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75/f9193c5ed0c4b6f938c4cfae9c2affcd8711f0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/75/f9193c5ed0c4b6f938c4cfae9c2affcd8711f0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fd objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fd/af7cfeb3a53844ab34ab00b9de58ed723a96da.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40/c69357e1922e409df5931cad1ec115350b3a90.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fd/af7cfeb3a53844ab34ab00b9de58ed723a96da.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fd/af7cfeb3a53844ab34ab00b9de58ed723a96da.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41/84449d13b44fd3e2a5697e24e6277267794cf1.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41/84449d13b44fd3e2a5697e24e6277267794cf1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/41/84449d13b44fd3e2a5697e24e6277267794cf1.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/44 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/44/c050ca42aedecee4c12dc3e9a3ff17790bae32.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40/c69357e1922e409df5931cad1ec115350b3a90.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-aarch64-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/44/c050ca42aedecee4c12dc3e9a3ff17790bae32.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/40/c69357e1922e409df5931cad1ec115350b3a90.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/44/c050ca42aedecee4c12dc3e9a3ff17790bae32.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86/c3b9709b79eb92f8fe52c68cb33003cba1ce25.debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/97 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/97/6f9af382034d74bd0ee2f7e1de13cc6f67ff6e.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/97/6f9af382034d74bd0ee2f7e1de13cc6f67ff6e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/97/6f9af382034d74bd0ee2f7e1de13cc6f67ff6e.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86/c3b9709b79eb92f8fe52c68cb33003cba1ce25.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86/c3b9709b79eb92f8fe52c68cb33003cba1ce25.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/14 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/14/dde896fddfd8d0dc7216b265113be76a47cf3f.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/0414b4cb0ecf7cc9def6fd895ca482868298e1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/0414b4cb0ecf7cc9def6fd895ca482868298e1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/0414b4cb0ecf7cc9def6fd895ca482868298e1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-aarch64-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/14/dde896fddfd8d0dc7216b265113be76a47cf3f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/14/dde896fddfd8d0dc7216b265113be76a47cf3f.debug debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/libcctbx0/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/libcctbx0/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/libcctbx0/usr/lib/debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86/5a085490aceeef108483d6c6a0f36caf1476ca.debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc ln -s libcctbx0 debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc/libcctbx0-dbgsym install -m0755 -d debian/.debhelper/libcctbx0 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86/5a085490aceeef108483d6c6a0f36caf1476ca.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/86/5a085490aceeef108483d6c6a0f36caf1476ca.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65/c299264a019f7ea6b8cbd27d879db79350b6ee.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65/c299264a019f7ea6b8cbd27d879db79350b6ee.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65/c299264a019f7ea6b8cbd27d879db79350b6ee.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/8ed2db41b81199a4cdb31dc986b668130583d1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/8ed2db41b81199a4cdb31dc986b668130583d1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/8ed2db41b81199a4cdb31dc986b668130583d1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/aa6fd72b7b21f5674f4ff8b84faade08a25866.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/aa6fd72b7b21f5674f4ff8b84faade08a25866.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/aa6fd72b7b21f5674f4ff8b84faade08a25866.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/af objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/af/a82d042cc413ea2da247744a3a942e0ef66409.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/af/a82d042cc413ea2da247744a3a942e0ef66409.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/af/a82d042cc413ea2da247744a3a942e0ef66409.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c2/9daabe3ca3d6a06bf2083d0de0d502d965d82b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c2/9daabe3ca3d6a06bf2083d0de0d502d965d82b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c2/9daabe3ca3d6a06bf2083d0de0d502d965d82b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/55a6801bd8a5faacf4b8826da062846cf3be2b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/55a6801bd8a5faacf4b8826da062846cf3be2b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/55a6801bd8a5faacf4b8826da062846cf3be2b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/2215a3be7c6b35f468612a615a432aa189342a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/2215a3be7c6b35f468612a615a432aa189342a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/2215a3be7c6b35f468612a615a432aa189342a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/4f8fe2afbef9e8d1206e76309efd3986e745c0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/4f8fe2afbef9e8d1206e76309efd3986e745c0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/4f8fe2afbef9e8d1206e76309efd3986e745c0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71/e4507a4a7ca90c5d115423ba76050dd1446366.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71/e4507a4a7ca90c5d115423ba76050dd1446366.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71/e4507a4a7ca90c5d115423ba76050dd1446366.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/9275b069d651fc2ad3a6d717020d386548c64a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/9275b069d651fc2ad3a6d717020d386548c64a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/9275b069d651fc2ad3a6d717020d386548c64a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/48 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/48/4b541d0c9edd1dd9d0c69afded9aa879abd3fa.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/48/4b541d0c9edd1dd9d0c69afded9aa879abd3fa.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/48/4b541d0c9edd1dd9d0c69afded9aa879abd3fa.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/58bd4bbfd4fad7e66edefe3d77b9f9e286d27c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/58bd4bbfd4fad7e66edefe3d77b9f9e286d27c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/58bd4bbfd4fad7e66edefe3d77b9f9e286d27c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3b objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3b/570e367f1d60a9fbf3c6e03f76091b80005ef7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3b/570e367f1d60a9fbf3c6e03f76091b80005ef7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3b/570e367f1d60a9fbf3c6e03f76091b80005ef7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/a22288bd091fa3336a66dc873e8a8fd732239f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/a22288bd091fa3336a66dc873e8a8fd732239f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/db/a22288bd091fa3336a66dc873e8a8fd732239f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/5dcc72000ae497b5bb00e66f981ddf07326637.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/5dcc72000ae497b5bb00e66f981ddf07326637.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/5dcc72000ae497b5bb00e66f981ddf07326637.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/fab53812526902a3693b86e01aeb53d2f58daa.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/fab53812526902a3693b86e01aeb53d2f58daa.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/fab53812526902a3693b86e01aeb53d2f58daa.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/e926a52700ab297cfd032870c524d58125c999.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/e926a52700ab297cfd032870c524d58125c999.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/e926a52700ab297cfd032870c524d58125c999.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/81325f81eb64b676918112c6f73a2c2e4563c2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/81325f81eb64b676918112c6f73a2c2e4563c2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bb/81325f81eb64b676918112c6f73a2c2e4563c2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/6da5769b86d05be870c0c99e008b268129b048.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/6da5769b86d05be870c0c99e008b268129b048.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4c/6da5769b86d05be870c0c99e008b268129b048.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/a5c6798c2557ef7d5daf5d477971a7d55472ad.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/a5c6798c2557ef7d5daf5d477971a7d55472ad.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/a5c6798c2557ef7d5daf5d477971a7d55472ad.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/b9a9cca1bacc6551ae837d9115fbf1bfbf4f7a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/b9a9cca1bacc6551ae837d9115fbf1bfbf4f7a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fe/b9a9cca1bacc6551ae837d9115fbf1bfbf4f7a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/e4e2d02ca30cf20bcc6febada82a5330bb03d7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/e4e2d02ca30cf20bcc6febada82a5330bb03d7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54/e4e2d02ca30cf20bcc6febada82a5330bb03d7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c8/f5a48607c31b7b1695c9bda30950304a81096c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c8/f5a48607c31b7b1695c9bda30950304a81096c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c8/f5a48607c31b7b1695c9bda30950304a81096c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/46a3dbc66d8e2d149acd67401a147c7639c0dc.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/46a3dbc66d8e2d149acd67401a147c7639c0dc.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b8/46a3dbc66d8e2d149acd67401a147c7639c0dc.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/04d6912f857c1e4400e4929a0e91e4378ed21c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/04d6912f857c1e4400e4929a0e91e4378ed21c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/29/04d6912f857c1e4400e4929a0e91e4378ed21c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/31e5aa599fe712e4775680bf5d099c9efab69d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/31e5aa599fe712e4775680bf5d099c9efab69d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/31e5aa599fe712e4775680bf5d099c9efab69d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4e/7f7cebc52bbc273339082de6623c24afe89a15.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4e/7f7cebc52bbc273339082de6623c24afe89a15.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4e/7f7cebc52bbc273339082de6623c24afe89a15.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/7a820f4997d53aa1abfe97f4aaae0315833c42.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/7a820f4997d53aa1abfe97f4aaae0315833c42.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6b/7a820f4997d53aa1abfe97f4aaae0315833c42.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/d86924211d9a54fc8618739996ed36751401d9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/d86924211d9a54fc8618739996ed36751401d9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/d86924211d9a54fc8618739996ed36751401d9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc/6ef957ebaf2a92d1c30ded846398b769e9da50.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc/6ef957ebaf2a92d1c30ded846398b769e9da50.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/fc/6ef957ebaf2a92d1c30ded846398b769e9da50.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e6/8cc90577542fbbfc1c84146b5d4d652c8b4ff2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e6/8cc90577542fbbfc1c84146b5d4d652c8b4ff2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e6/8cc90577542fbbfc1c84146b5d4d652c8b4ff2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/08283ff3853538101043106a21f81906338575.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/08283ff3853538101043106a21f81906338575.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cf/08283ff3853538101043106a21f81906338575.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/4aa7cb0ddab8bc7b0e712bbcc4f1404df653bd.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/4aa7cb0ddab8bc7b0e712bbcc4f1404df653bd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/4aa7cb0ddab8bc7b0e712bbcc4f1404df653bd.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8/fd90b450c218747834ae7ff94715dd4c8fa022.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8/fd90b450c218747834ae7ff94715dd4c8fa022.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a8/fd90b450c218747834ae7ff94715dd4c8fa022.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b0/4ad8603fde263c51f52d83d51d997d2670aa9f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b0/4ad8603fde263c51f52d83d51d997d2670aa9f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b0/4ad8603fde263c51f52d83d51d997d2670aa9f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/2114e4e733ec33f4752e619c8194a4d1ea6684.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/2114e4e733ec33f4752e619c8194a4d1ea6684.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/2114e4e733ec33f4752e619c8194a4d1ea6684.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/45996be5bcbd794dd603757efdc79a3c63a759.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/45996be5bcbd794dd603757efdc79a3c63a759.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3c/45996be5bcbd794dd603757efdc79a3c63a759.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3/b431d12b84d3ecb463b812c21881c5e389b47a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3/b431d12b84d3ecb463b812c21881c5e389b47a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3/b431d12b84d3ecb463b812c21881c5e389b47a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/322cabb30799a9ea61e6169bf30c097784f520.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/322cabb30799a9ea61e6169bf30c097784f520.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/58/322cabb30799a9ea61e6169bf30c097784f520.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/48 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/48/81b0ed5ac4338e62a79987db6a220a32d1732e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/48/81b0ed5ac4338e62a79987db6a220a32d1732e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/48/81b0ed5ac4338e62a79987db6a220a32d1732e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/b1c2b7faa071293c701216d0b7b85a75da27d0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/b1c2b7faa071293c701216d0b7b85a75da27d0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/31/b1c2b7faa071293c701216d0b7b85a75da27d0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/e85d95dfbc0952bb8f3744a91db78808415039.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/e85d95dfbc0952bb8f3744a91db78808415039.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/99/e85d95dfbc0952bb8f3744a91db78808415039.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a/7241b8c80b07cada8b1c7b224433f57851e88c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a/7241b8c80b07cada8b1c7b224433f57851e88c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4a/7241b8c80b07cada8b1c7b224433f57851e88c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/68 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-aarch64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2b/c001bca30b7fa380262a92924087fa3b01a842.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2b/c001bca30b7fa380262a92924087fa3b01a842.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2b/c001bca30b7fa380262a92924087fa3b01a842.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/df objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/df/0b653796eb93bf3dbcc51c5cc4c3ae2c21f474.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/df/0b653796eb93bf3dbcc51c5cc4c3ae2c21f474.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/df/0b653796eb93bf3dbcc51c5cc4c3ae2c21f474.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1b objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1b/1dbfe5f5f2b884e016bd882534ad854e0936de.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1b/1dbfe5f5f2b884e016bd882534ad854e0936de.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1b/1dbfe5f5f2b884e016bd882534ad854e0936de.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/45773c8aa16a9895bf091c2812a68d1e052533.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/45773c8aa16a9895bf091c2812a68d1e052533.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9f/45773c8aa16a9895bf091c2812a68d1e052533.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/45 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-aarch64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1b/50f08ee77934ab66984f41f12225311e21620f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1b/50f08ee77934ab66984f41f12225311e21620f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1b/50f08ee77934ab66984f41f12225311e21620f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-aarch64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8c/2f3d3a728b142aaafd39ffa67f1d96403d0bdb.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8c/2f3d3a728b142aaafd39ffa67f1d96403d0bdb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8c/2f3d3a728b142aaafd39ffa67f1d96403d0bdb.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-aarch64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/1e8346b8d27068bfb55f6181fb35cf66df51ef.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/1e8346b8d27068bfb55f6181fb35cf66df51ef.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/1e8346b8d27068bfb55f6181fb35cf66df51ef.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/16 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-aarch64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/d0553ec58944508559970bf8d27c9c5c49ed3b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/d0553ec58944508559970bf8d27c9c5c49ed3b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/d0553ec58944508559970bf8d27c9c5c49ed3b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-aarch64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/8fd577c6db45cec3beeb1e577c3f04b49bc85f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/8fd577c6db45cec3beeb1e577c3f04b49bc85f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f4/8fd577c6db45cec3beeb1e577c3f04b49bc85f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/0b8ff3b884cf273d6a336265e12a4b3a1e42a9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/0b8ff3b884cf273d6a336265e12a4b3a1e42a9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d5/0b8ff3b884cf273d6a336265e12a4b3a1e42a9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/487cc5c73b2a7310add6d465aef3e8e874ddd0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/487cc5c73b2a7310add6d465aef3e8e874ddd0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/56/487cc5c73b2a7310add6d465aef3e8e874ddd0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/0cffb6907d0a8531ba8d8bcadfe0af9ddc4391.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/0cffb6907d0a8531ba8d8bcadfe0af9ddc4391.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/26/0cffb6907d0a8531ba8d8bcadfe0af9ddc4391.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/e05a3b5c4801822e037923c3bab5d8db64e7c7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/e05a3b5c4801822e037923c3bab5d8db64e7c7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/e05a3b5c4801822e037923c3bab5d8db64e7c7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/14bc4cbd68efb3193e7e47203005f5d4157026.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/14bc4cbd68efb3193e7e47203005f5d4157026.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/76/14bc4cbd68efb3193e7e47203005f5d4157026.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35/7caefaedf181e2022b4c74cad0810708560530.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35/7caefaedf181e2022b4c74cad0810708560530.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/35/7caefaedf181e2022b4c74cad0810708560530.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/87b7e84b522f48970ac7eb288750a9c145d8de.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/87b7e84b522f48970ac7eb288750a9c145d8de.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b5/87b7e84b522f48970ac7eb288750a9c145d8de.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/40e48480126af60bb155d07810e02172dcb645.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/40e48480126af60bb155d07810e02172dcb645.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/30/40e48480126af60bb155d07810e02172dcb645.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/10 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/10/49269b8cdfef48c93cc10c3b8dbeeb3f78b21c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/10/49269b8cdfef48c93cc10c3b8dbeeb3f78b21c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/10/49269b8cdfef48c93cc10c3b8dbeeb3f78b21c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/11e0bf888a20ceb963f9b0dd1a42a1ce841ba4.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/11e0bf888a20ceb963f9b0dd1a42a1ce841ba4.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0d/11e0bf888a20ceb963f9b0dd1a42a1ce841ba4.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/22 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/22/bb91a91be241821f3f5147a53c039505acd59c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/22/bb91a91be241821f3f5147a53c039505acd59c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/22/bb91a91be241821f3f5147a53c039505acd59c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-aarch64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/a870c133e0ed3929afe631b989d53b97f09565.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/a870c133e0ed3929afe631b989d53b97f09565.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/a870c133e0ed3929afe631b989d53b97f09565.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c9 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c9/cf8c46ae1f94e4f1dcb08b732d1eb0efff3630.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c9/cf8c46ae1f94e4f1dcb08b732d1eb0efff3630.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c9/cf8c46ae1f94e4f1dcb08b732d1eb0efff3630.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/8b9797c5e9f820823857661546d816bbf63803.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/8b9797c5e9f820823857661546d816bbf63803.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b9/8b9797c5e9f820823857661546d816bbf63803.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/cee32038753779efafba021a0173d1d4733b50.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/cee32038753779efafba021a0173d1d4733b50.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f5/cee32038753779efafba021a0173d1d4733b50.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-aarch64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/b70b45662c2a68ca46ef3494df279fcaa8d359.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/b70b45662c2a68ca46ef3494df279fcaa8d359.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b1/b70b45662c2a68ca46ef3494df279fcaa8d359.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/00 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-aarch64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/482727fb4c67f1f0f71bce0508a66dda3ed0dd.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/482727fb4c67f1f0f71bce0508a66dda3ed0dd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/482727fb4c67f1f0f71bce0508a66dda3ed0dd.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/cf05ef09986b8686ae745447715422c5105f71.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/cf05ef09986b8686ae745447715422c5105f71.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/cf05ef09986b8686ae745447715422c5105f71.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/d3ff42990016cc6a4b38d5ea61c88b8689e496.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/d3ff42990016cc6a4b38d5ea61c88b8689e496.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/82/d3ff42990016cc6a4b38d5ea61c88b8689e496.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca/f3d7ab72cbaf5cb3f5affc3a0c3a27d5754a8a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca/f3d7ab72cbaf5cb3f5affc3a0c3a27d5754a8a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ca/f3d7ab72cbaf5cb3f5affc3a0c3a27d5754a8a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef/9cc0bc8c9493fcb6eed2e7071b07f65693a139.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef/9cc0bc8c9493fcb6eed2e7071b07f65693a139.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ef/9cc0bc8c9493fcb6eed2e7071b07f65693a139.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/50b809b36392cce497325c2c1c139e313a4668.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/50b809b36392cce497325c2c1c139e313a4668.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b7/50b809b36392cce497325c2c1c139e313a4668.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-aarch64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/fbb9939943923ecf118bf8865e02fe8a6e98e7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/fbb9939943923ecf118bf8865e02fe8a6e98e7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/36/fbb9939943923ecf118bf8865e02fe8a6e98e7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-aarch64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/376b9c7b16cc70947132fab75dd95cbe15bf4f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/376b9c7b16cc70947132fab75dd95cbe15bf4f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8d/376b9c7b16cc70947132fab75dd95cbe15bf4f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/54 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-aarch64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/137e107859d1699926647365f3068aaa26f77a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/137e107859d1699926647365f3068aaa26f77a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bd/137e107859d1699926647365f3068aaa26f77a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-aarch64-linux-gnu.so 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objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3 debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/beb1a9ae934b1fd71b5ead8c205f043c63d9af.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/beb1a9ae934b1fd71b5ead8c205f043c63d9af.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3 objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/4d/beb1a9ae934b1fd71b5ead8c205f043c63d9af.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/77/35ef017b0e8f87660e1a73286f2194fdced067.debug debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-cctbx/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-cctbx/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-cctbx/usr/lib/debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/share/doc ln -s python3-cctbx debian/.debhelper/python3-cctbx/dbgsym-root/usr/share/doc/python3-cctbx-dbgsym install -m0755 -d debian/.debhelper/python3-cctbx dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/libcctbx0/DEBIAN/shlibs install -m0755 -d debian/libcctbx0/DEBIAN echo "libann_adaptor 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libasymmetric_map 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcbf-private 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libccp4io 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcctbx 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcctbx_sgtbx_asu 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libdxtbxspotfinder 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_mtz 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_pdb 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_xplor 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libmmtbx_masks 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libmmtbx_tls 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libomptbx 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "librstbx 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_boost_python 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_minpack 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_slatec 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libsmtbx_refinement_constraints 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libspotfinder 0 libcctbx0 (>= 2025.2+ds2+~3.23.0+ds1)" >> debian/libcctbx0/DEBIAN/shlibs chmod 0644 -- debian/libcctbx0/DEBIAN/shlibs mv debian/.debhelper/generated/libcctbx0/triggers.new debian/.debhelper/generated/libcctbx0/triggers rm -f debian/libcctbx-dev/DEBIAN/shlibs rm -f debian/python3-cctbx/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN dpkg-shlibdeps -Tdebian/libcctbx0.substvars debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged install -m0755 -d debian/python3-cctbx/DEBIAN dpkg-shlibdeps -Tdebian/python3-cctbx.substvars debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx.find_distances debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx.getting_started debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/error/tst_error debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.13/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.13/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.13/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/lib/cctbx/python3.13/boost_adaptbx/tests/tst_optional_copy debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-aarch64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-aarch64-linux-gnu.so dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: symbol PyExc_RuntimeError used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyImport_ImportModule used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyObject_IsTrue used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyExc_IndexError used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyRange_Type used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _Py_Dealloc used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _Py_NoneStruct used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyErr_SetString used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyObject_CallFunction used by debian/libcctbx0/usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyExc_StopIteration: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_GetIter: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_GetIter: it's probably a plugin dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 34 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyImport_AddModule: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsTrue: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyCapsule_New: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsTrue: it's probably a plugin dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyObject_Size: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyCapsule_GetPointer: it's probably a plugin dpkg-shlibdeps: warning: 51 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBytes_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PySlice_Type: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyExc_StopIteration: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyDict_GetItemWithError: it's probably a plugin dpkg-shlibdeps: warning: 136 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 22 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyDict_Type: it's probably a plugin dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromWideChar: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyIter_Check: it's probably a plugin dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PySlice_Type: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 32 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 27 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyExc_StopIteration: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-313-aarch64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dh_installdeb -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN install -p -m0644 debian/.debhelper/generated/libcctbx0/triggers debian/libcctbx0/DEBIAN/triggers install -m0755 -d debian/libcctbx-dev/DEBIAN install -m0755 -d debian/python3-cctbx/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-cctbx/DEBIAN/postinst cat debian/python3-cctbx.postinst.debhelper >> debian/python3-cctbx/DEBIAN/postinst chmod 0755 -- debian/python3-cctbx/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-cctbx/DEBIAN/prerm cat debian/python3-cctbx.prerm.debhelper >> debian/python3-cctbx/DEBIAN/prerm chmod 0755 -- debian/python3-cctbx/DEBIAN/prerm dh_numpy3 -a -O--buildsystem=pybuild dh_numpy3: skipping binary package libcctbx0 which does not depend on the NumPy C ABI dh_numpy3: skipping binary package libcctbx-dev which does not depend on the NumPy C ABI mv debian/python3-cctbx.substvars.new debian/python3-cctbx.substvars dh_gencontrol -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN echo misc:Depends= >> debian/libcctbx0.substvars echo misc:Pre-Depends= >> debian/libcctbx0.substvars install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -cdebian/control -Pdebian/.debhelper/libcctbx0/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libcctbx0-dbgsym -DDepends="libcctbx0 (= \${binary:Version})" -DDescription="debug symbols for libcctbx0" -DBuild-Ids="0cafea64204b90c9b31e433848a992ef80e887bf 0d4d4a2d3e8d8aadfaf0c85e97a8cdd8b1d6cf18 0da01bc76df178a4c91c90245c484d95ef2dfcc1 118ec818e2a8aef469e456320fff8e209a5c6203 11d2050414411f11f3ac0cec16150e3ca78e3147 14dde896fddfd8d0dc7216b265113be76a47cf3f 160eee3a0a79ac061fdc3a16ead64b169795f1c2 25a475e4ac49f117c5cce9db51f3977d4c13dc46 35b8d88d46ce42e23b0e342eb1b5385ae44be197 4184449d13b44fd3e2a5697e24e6277267794cf1 44c050ca42aedecee4c12dc3e9a3ff17790bae32 6f2e55bdc4eb3f7c4906b53a113ccb49023e8e9d 78e3a204d1b5cfef7a843937eea3328f66ca6cef 976f9af382034d74bd0ee2f7e1de13cc6f67ff6e 9a5e3044aa965861d92ecb6134de5a9b24895f25 cc25063d831d6cfb11fc27d15fdbe86e8184983b eb58622dc1e64d09adabfb5df2c69d5a5139f084 fd9dcac506af1011b4fded922a28cd02d5e62ab9 fdaf7cfeb3a53844ab34ab00b9de58ed723a96da" -DSection=debug -UMulti-Arch -UReplaces -UBreaks install -m0755 -d debian/libcctbx-dev/DEBIAN echo misc:Depends= >> debian/libcctbx-dev.substvars echo misc:Pre-Depends= >> debian/libcctbx-dev.substvars dpkg-gencontrol -plibcctbx-dev -ldebian/changelog -Tdebian/libcctbx-dev.substvars -cdebian/control -Pdebian/libcctbx-dev install -m0755 -d debian/python3-cctbx/DEBIAN echo misc:Depends= >> debian/python3-cctbx.substvars echo misc:Pre-Depends= >> debian/python3-cctbx.substvars install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -cdebian/control -Pdebian/.debhelper/python3-cctbx/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-cctbx-dbgsym -DDepends="python3-cctbx (= \${binary:Version})" -DDescription="debug symbols for python3-cctbx" -DBuild-Ids="00f6db8b143b8ba346bb1077a68cde00dbf970f5 02952fcbd0d8e0cb50fb0adefd729709ff0b7bc2 0413f9464e952f3a7f34c323346769d62608b7be 04ec33ab729bc078144b77840a820e48c822d33a 05e05a3b5c4801822e037923c3bab5d8db64e7c7 08052f75429e756243d4396aba0dd359d7dd0246 099e830caebcfd078bea058ab2f210e055b84572 0ad154b81cda01c07bb53ee871353d1ff94018a6 0d11e0bf888a20ceb963f9b0dd1a42a1ce841ba4 0d857a44edf46fb7c126509a234ffe37c623a7f1 0f58bd4bbfd4fad7e66edefe3d77b9f9e286d27c 102b63799a2a5f2810070ba75b9abf64bf1336f6 1049269b8cdfef48c93cc10c3b8dbeeb3f78b21c 122114e4e733ec33f4752e619c8194a4d1ea6684 13588e16dfef3263de4d5f861fd39eb760be1299 157b502b74b8c59561fb11e696fe4d39467b73c7 16024ca0c77ae2cbc971376801f2d3488ba9ea41 1717a6767994a96d771baa7ec376b728f001e9f4 1b1dbfe5f5f2b884e016bd882534ad854e0936de 1b50f08ee77934ab66984f41f12225311e21620f 1c079dec16b18813b411b32af0936fe5cb0d6c28 1e7b856f5cc756f84b2fc2e6d951ea745f41dbd5 1fc94d1a1ea10bfa27403a6955f184f8715ced72 21d0553ec58944508559970bf8d27c9c5c49ed3b 22bb91a91be241821f3f5147a53c039505acd59c 260cffb6907d0a8531ba8d8bcadfe0af9ddc4391 26896b49c836b0231489efd0e19a1e06814e627d 26e926a52700ab297cfd032870c524d58125c999 2726a3b78782e8f5f82d1c4544b2a7a6c45bb4ed 2904d6912f857c1e4400e4929a0e91e4378ed21c 29d0d4d37a45886fd9e2473f0e9e45dc85148f1b 2a21b76ba6651276c81ce73e42002b271ee094a2 2bc001bca30b7fa380262a92924087fa3b01a842 2d482727fb4c67f1f0f71bce0508a66dda3ed0dd 2d56408c49acce28a182ab511565c89da1232210 2f4b9969d52663feb89a01081a5707bc9d7feba9 3040e48480126af60bb155d07810e02172dcb645 31b1c2b7faa071293c701216d0b7b85a75da27d0 32aa6fd72b7b21f5674f4ff8b84faade08a25866 357caefaedf181e2022b4c74cad0810708560530 35c498d7abcdfce3dbdd5a5e437028961ab6c628 36a870c133e0ed3929afe631b989d53b97f09565 36fbb9939943923ecf118bf8865e02fe8a6e98e7 3778b649c3dd2b7b491fcffc3391f9efb77cff54 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c29daabe3ca3d6a06bf2083d0de0d502d965d82b c378611e9f1550e14047353d6c0f4c6b90362cec c8f5a48607c31b7b1695c9bda30950304a81096c c9cf8c46ae1f94e4f1dcb08b732d1eb0efff3630 caa5d6640b2cf2b535d3c8869ac4c0cdac353c4f caf3d7ab72cbaf5cb3f5affc3a0c3a27d5754a8a cf08283ff3853538101043106a21f81906338575 d053f36d0d32e4c9c35421aae176cae2306d0e80 d2e9a282e8d50b3e35ed9e62ae00c9d84f8ff0e5 d431e5aa599fe712e4775680bf5d099c9efab69d d45b06ed4f9a539b204c7873781fa3e3d11b5160 d50b8ff3b884cf273d6a336265e12a4b3a1e42a9 d5196250486a5921b6f55a179588e4e02111ccb4 d5ce1143bc28076d81f434d59368d3b3f9a40c1a d6ef8afc0994d19ae46fc9e9af0b7fe39307f7a6 dba22288bd091fa3336a66dc873e8a8fd732239f dbbcfc2569564149a7e8c1973f3d0eb5ad3270da dd9b85221b3ca440c152ea275fab70522094b396 df0b653796eb93bf3dbcc51c5cc4c3ae2c21f474 e158152cb8321cec437fb01167c8f6e8ac8df525 e68cc90577542fbbfc1c84146b5d4d652c8b4ff2 e73d0bbf08b5dbd1bcf22e727b2cad89a4fe27db e74aa7cb0ddab8bc7b0e712bbcc4f1404df653bd eda712ae1bc61aa6b5bbe76cca7c463970c2181c ef57db0f3c8887e228a9f903abf3a7cb5b19a2e7 ef9cc0bc8c9493fcb6eed2e7071b07f65693a139 f05dcc72000ae497b5bb00e66f981ddf07326637 f1b8c0766fdf878b21dbd2d7469c700332680282 f48fd577c6db45cec3beeb1e577c3f04b49bc85f f5cee32038753779efafba021a0173d1d4733b50 f5e03faf3cc16ed90dcfc5fa1062fe70a7b9e460 f92b42b58c0e780a5fadf7593ccf522851ef6821 f93febbac6369db30af31342ef752131d1b06734 f9c7d3fbdf0a66e0da75e51543e94ba9849b6040 fb37e86be7a3fc967cbb96979edc2caae21328e9 fc6ef957ebaf2a92d1c30ded846398b769e9da50 fcd01cd890c75e7f8a08433470836ecd4e61d515 feb9a9cca1bacc6551ae837d9115fbf1bfbf4f7a" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -cdebian/control -Pdebian/libcctbx0 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -cdebian/control -Pdebian/python3-cctbx chmod 0644 -- debian/libcctbx-dev/DEBIAN/control chmod 0644 -- debian/libcctbx0/DEBIAN/control chmod 0644 -- debian/python3-cctbx/DEBIAN/control dh_md5sums -a -O--buildsystem=pybuild install -m0755 -d debian/python3-cctbx/DEBIAN install -m0755 -d debian/libcctbx-dev/DEBIAN install -m0755 -d debian/libcctbx0/DEBIAN cd debian/libcctbx0 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libcctbx-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-cctbx >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcctbx-dev/DEBIAN/md5sums chmod 0644 -- debian/libcctbx0/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN cd debian/.debhelper/libcctbx0/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/python3-cctbx/DEBIAN/md5sums install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN cd debian/.debhelper/python3-cctbx/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/md5sums dh_builddeb -a -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/.debhelper/libcctbx0/dbgsym-root .. dpkg-deb --root-owner-group --build debian/python3-cctbx .. dpkg-deb --root-owner-group --build debian/.debhelper/python3-cctbx/dbgsym-root .. dpkg-deb --root-owner-group --build debian/libcctbx0 .. dpkg-deb --root-owner-group --build debian/libcctbx-dev .. dpkg-deb: building package 'python3-cctbx-dbgsym' in '../python3-cctbx-dbgsym_2025.2+ds2+~3.23.0+ds1-1_arm64.deb'. dpkg-deb: building package 'libcctbx-dev' in '../libcctbx-dev_2025.2+ds2+~3.23.0+ds1-1_arm64.deb'. dpkg-deb: building package 'libcctbx0-dbgsym' in '../libcctbx0-dbgsym_2025.2+ds2+~3.23.0+ds1-1_arm64.deb'. dpkg-deb: building package 'python3-cctbx' in '../python3-cctbx_2025.2+ds2+~3.23.0+ds1-1_arm64.deb'. dpkg-deb: building package 'libcctbx0' in '../libcctbx0_2025.2+ds2+~3.23.0+ds1-1_arm64.deb'. dpkg-genbuildinfo --build=any -O../cctbx_2025.2+ds2+~3.23.0+ds1-1_arm64.buildinfo dpkg-genchanges --build=any -O../cctbx_2025.2+ds2+~3.23.0+ds1-1_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-11-29T21:20:08Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Sat, 29 Nov 2025 21:20:11 +0000 | +------------------------------------------------------------------------------+ cctbx_2025.2+ds2+~3.23.0+ds1-1_arm64.changes: --------------------------------------------- Format: 1.8 Date: Fri, 24 Oct 2025 19:38:49 +0200 Source: cctbx Binary: libcctbx-dev libcctbx0 libcctbx0-dbgsym python3-cctbx python3-cctbx-dbgsym Architecture: arm64 Version: 2025.2+ds2+~3.23.0+ds1-1 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Roland Mas Description: libcctbx-dev - Computational Crystallography Toolbox - headers libcctbx0 - Computational Crystallography Toolbox - runtime libraries python3-cctbx - Python Toolbox for crystallography Closes: 1085414 1116719 Changes: cctbx (2025.2+ds2+~3.23.0+ds1-1) unstable; urgency=medium . [ Picca Frédéric-Emmanuel ] * New upstream version 2025.2+ds2+~3.23.0+ds1 . [ Roland Mas ] * Bug fix: "FTBFS with the nocheck build profile", thanks to Santiago Vila (Closes: #1116719). * Bug fix: "Python SyntaxWarning", thanks to Graham Inggs (Closes: #1085414). 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b85c041e9725df1dccb8e1846b9f23a4b174829b50501012c3f72c1880376077 36482320 python3-cctbx_2025.2+ds2+~3.23.0+ds1-1_arm64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Sat, 29 Nov 2025 21:20:04 +0000 Build-Path: /build/reproducible-path/cctbx-2025.2+ds2+~3.23.0+ds1 Installed-Build-Depends: adduser (= 3.153), adwaita-icon-theme (= 49.0-1), architecture-properties (= 0.2.6), at-spi2-common (= 2.58.1-1), autoconf (= 2.72-3.1), automake (= 1:1.18.1-2), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.7), bash (= 5.3-1), binutils (= 2.45-8), binutils-aarch64-linux-gnu (= 2.45-8), binutils-common (= 2.45-8), blt (= 2.5.3+dfsg-8), bsdextrautils (= 2.41.2-4), build-essential (= 12.12), bzip2 (= 1.0.8-6), ca-certificates (= 20250419), comerr-dev (= 2.1-1.47.2-3+b3), coreutils (= 9.7-3), cpp (= 4:15.2.0-4), cpp-15 (= 15.2.0-7), cpp-15-aarch64-linux-gnu (= 15.2.0-7), cpp-aarch64-linux-gnu (= 4:15.2.0-4), dash (= 0.5.12-12), dbus (= 1.16.2-2), dbus-bin (= 1.16.2-2), dbus-daemon (= 1.16.2-2), dbus-session-bus-common (= 1.16.2-2), dbus-system-bus-common (= 1.16.2-2), dbus-user-session (= 1.16.2-2), dconf-gsettings-backend (= 0.49.0-1), dconf-service (= 0.49.0-1), debconf (= 1.5.91), debhelper (= 13.28), debianutils (= 5.23.2), dh-autoreconf (= 21), dh-exec (= 0.30+b1), dh-python (= 6.20250414), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.16-2), fftw-dev (= 2.1.5-7+b1), fftw2 (= 2.1.5-7+b1), file (= 1:5.46-5), findutils (= 4.10.0-3), fontconfig (= 2.15.0-2.4), fontconfig-config (= 2.15.0-2.4), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-font-awesome (= 5.0.10+really4.7.0~dfsg-4.1), fonts-lato (= 2.015-1), fonts-lyx (= 2.4.4-2), fonts-urw-base35 (= 20200910-8), g++ (= 4:15.2.0-4), g++-15 (= 15.2.0-7), g++-15-aarch64-linux-gnu (= 15.2.0-7), g++-aarch64-linux-gnu (= 4:15.2.0-4), gcc (= 4:15.2.0-4), gcc-14-base (= 14.3.0-10), gcc-15 (= 15.2.0-7), gcc-15-aarch64-linux-gnu (= 15.2.0-7), gcc-15-base (= 15.2.0-7), gcc-aarch64-linux-gnu (= 4:15.2.0-4), gettext (= 0.23.1-2+b1), gettext-base (= 0.23.1-2+b1), grep (= 3.12-1), groff-base (= 1.23.0-9), gtk-update-icon-cache (= 4.20.2+ds-1), gzip (= 1.13-1), hdf5-helpers (= 1.14.5+repack-4), hicolor-icon-theme (= 0.18-2), hostname (= 3.25), ibverbs-providers (= 56.1-1+b1), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), jq (= 1.8.1-4), krb5-multidev (= 1.21.3-5), libabsl20240722 (= 20240722.0-4), libacl1 (= 2.3.2-2+b1), libaec-dev (= 1.1.4-2), libaec0 (= 1.1.4-2), libamd-comgr2 (= 6.0+git20231212.4510c28+dfsg-3+b2), libamdhip64-5 (= 5.7.1-7), libann-cctbx-dev (= 1.1.2+doc-9+b2), libann-cctbx0 (= 1.1.2+doc-9+b2), libantlr3c-3.4-0 (= 3.4+dfsg-4+b2), libantlr3c-dev (= 3.4+dfsg-4+b2), libaom3 (= 3.13.1-1), libapparmor1 (= 4.1.0-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 15.2.0-7), libatk-bridge2.0-0t64 (= 2.58.1-1), libatk1.0-0t64 (= 2.58.1-1), libatomic1 (= 15.2.0-7), libatspi2.0-0t64 (= 2.58.1-1), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1), libavahi-client3 (= 0.8-17), libavahi-common-data (= 0.8-17), libavahi-common3 (= 0.8-17), libavif16 (= 1.3.0-1+b1), libbinutils (= 2.45-8), libblas3 (= 3.12.1-7), libblkid1 (= 2.41.2-4), libboost-atomic1.83-dev (= 1.83.0-5), libboost-atomic1.83.0 (= 1.83.0-5), libboost-chrono1.83-dev (= 1.83.0-5), libboost-chrono1.83.0t64 (= 1.83.0-5), libboost-date-time1.83-dev (= 1.83.0-5), libboost-date-time1.83.0 (= 1.83.0-5), libboost-dev (= 1.83.0.2+b2), libboost-numpy-dev (= 1.83.0.2+b2), libboost-numpy1.83-dev (= 1.83.0-5), libboost-numpy1.83.0 (= 1.83.0-5), libboost-python-dev (= 1.83.0.2+b2), libboost-python1.83-dev (= 1.83.0-5), libboost-python1.83.0 (= 1.83.0-5), libboost-serialization1.83-dev (= 1.83.0-5), libboost-serialization1.83.0 (= 1.83.0-5), libboost-system1.83-dev (= 1.83.0-5), libboost-system1.83.0 (= 1.83.0-5), libboost-thread-dev (= 1.83.0.2+b2), libboost-thread1.83-dev (= 1.83.0-5), libboost-thread1.83.0 (= 1.83.0-5), libboost-timer-dev (= 1.83.0.2+b2), libboost-timer1.83-dev (= 1.83.0-5), libboost-timer1.83.0 (= 1.83.0-5), libboost1.83-dev (= 1.83.0-5), libbrotli-dev (= 1.1.0-2+b7), libbrotli1 (= 1.1.0-2+b7), libbsd0 (= 0.12.2-2), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.41-12), libc-dev-bin (= 2.41-12), libc6 (= 2.41-12), libc6-dev (= 2.41-12), libcairo-gobject2 (= 1.18.4-1+b1), libcairo2 (= 1.18.4-1+b1), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-10+b1), libcbf-dev (= 0.9.7+dfsg1-5.1), libcbf1t64 (= 0.9.7+dfsg1-5.1), libcc1-0 (= 15.2.0-7), libccp4-data (= 8.0.0-5), libccp4-dev (= 8.0.0-5), libccp4c0t64 (= 8.0.0-5), libccp4f0t64 (= 8.0.0-5), libclipper-dev (= 2.1.20201109-2+b3), libclipper2 (= 2.1.20201109-2+b3), libcloudproviders0 (= 0.3.6-3), libcolord2 (= 1.4.8-1), libcom-err2 (= 1.47.2-3+b3), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.45-8), libctf0 (= 2.45-8), libcups2t64 (= 2.4.14-1), libcurl3t64-gnutls (= 8.17.0~rc2-1), libcurl4-openssl-dev (= 8.17.0~rc2-1), libcurl4t64 (= 8.17.0~rc2-1), libdatrie1 (= 0.2.13-4), libdav1d7 (= 1.5.1-1), libdb5.3t64 (= 5.3.28+dfsg2-10), libdbus-1-3 (= 1.16.2-2), libdconf1 (= 0.49.0-1), libdebconfclient0 (= 0.280), libdebhelper-perl (= 13.28), libdeflate-dev (= 1.23-2), libdeflate0 (= 1.23-2), libdouble-conversion3 (= 3.3.1-2), libdpkg-perl (= 1.22.21), libdrm-amdgpu1 (= 2.4.127-1), libdrm-common (= 2.4.127-1), libdrm2 (= 2.4.127-1), libedit2 (= 3.1-20250104-1), libegl-mesa0 (= 25.2.5-1), libegl1 (= 1.7.0-1+b2), libeigen3-dev (= 3.4.0-5), libelf1t64 (= 0.193-3), libepoxy0 (= 1.5.10-2), libevdev2 (= 1.13.4+dfsg-1), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libevent-core-2.1-7t64 (= 2.1.12-stable-10+b1), libevent-pthreads-2.1-7t64 (= 2.1.12-stable-10+b1), libexpat1 (= 2.7.3-1), libexpat1-dev (= 2.7.3-1), libfabric1 (= 2.1.0-1.1), libffi8 (= 3.5.2-2), libfftw3-bin (= 3.3.10-2+b1), libfftw3-dev (= 3.3.10-2+b1), libfftw3-double3 (= 3.3.10-2+b1), libfftw3-long3 (= 3.3.10-2+b1), libfftw3-single3 (= 3.3.10-2+b1), libfile-stripnondeterminism-perl (= 1.15.0-1), libfontconfig1 (= 2.15.0-2.4), libfontenc1 (= 1:1.1.8-1+b2), libfreetype6 (= 2.13.3+dfsg-1), libfribidi0 (= 1.0.16-3), libfuse3-4 (= 3.17.4-1), libgav1-1 (= 0.19.0-3+b1), libgbm1 (= 25.2.5-1), libgcc-14-dev (= 14.3.0-10), libgcc-15-dev (= 15.2.0-7), libgcc-s1 (= 15.2.0-7), libgcrypt20 (= 1.11.2-2), libgdbm-compat4t64 (= 1.26-1), libgdbm6t64 (= 1.26-1), libgdk-pixbuf-2.0-0 (= 2.44.4+dfsg-1), libgdk-pixbuf2.0-common (= 2.44.4+dfsg-1), libgfortran5 (= 15.2.0-7), libgl-dev (= 1.7.0-1+b2), libgl1 (= 1.7.0-1+b2), libgl1-mesa-dri (= 25.2.5-1), libgles2 (= 1.7.0-1+b2), libglew2.2 (= 2.2.0-4+b2), libglib2.0-0t64 (= 2.86.1-1), libglu1-mesa (= 9.0.2-1.1+b3), libglu1-mesa-dev (= 9.0.2-1.1+b3), libglut3.12 (= 3.4.0-6), libglvnd0 (= 1.7.0-1+b2), libglx-dev (= 1.7.0-1+b2), libglx-mesa0 (= 25.2.5-1), libglx0 (= 1.7.0-1+b2), libgmp-dev (= 2:6.3.0+dfsg-5), libgmp10 (= 2:6.3.0+dfsg-5), libgmpxx4ldbl (= 2:6.3.0+dfsg-5), libgnutls-dane0t64 (= 3.8.10-2), libgnutls-openssl27t64 (= 3.8.10-2), libgnutls28-dev (= 3.8.10-2), libgnutls30t64 (= 3.8.10-2), libgomp1 (= 15.2.0-7), libgpg-error0 (= 1.56-2), libgprofng0 (= 2.45-8), libgraphite2-3 (= 1.3.14-11), libgssapi-krb5-2 (= 1.21.3-5), libgssrpc4t64 (= 1.21.3-5), libgtk-3-0t64 (= 3.24.51-1), libgtk-3-common (= 3.24.51-1), libgudev-1.0-0 (= 238-7), libharfbuzz0b (= 12.1.0-1), libhdf5-310 (= 1.14.5+repack-4), libhdf5-cpp-310 (= 1.14.5+repack-4), libhdf5-dev (= 1.14.5+repack-4), libhdf5-fortran-310 (= 1.14.5+repack-4), libhdf5-hl-310 (= 1.14.5+repack-4), libhdf5-hl-cpp-310 (= 1.14.5+repack-4), libhdf5-hl-fortran-310 (= 1.14.5+repack-4), libhogweed6t64 (= 3.10.2-1), libhsa-runtime64-1 (= 6.1.2-3), libhsakmt1 (= 6.2.4+ds-1), libhwasan0 (= 15.2.0-7), libhwloc-plugins (= 2.12.2-1), libhwloc15 (= 2.12.2-1), libibmad5 (= 56.1-1+b1), libibumad3 (= 56.1-1+b1), libibverbs1 (= 56.1-1+b1), libice6 (= 2:1.1.1-1), libicu76 (= 76.1-4), libidn2-0 (= 2.3.8-4), libidn2-dev (= 2.3.8-4), libimagequant0 (= 4.4.0-3), libinput-bin (= 1.28.1-1), libinput10 (= 1.28.1-1), libisl23 (= 0.27-1), libitm1 (= 15.2.0-7), libjansson4 (= 2.14-2+b3), libjbig-dev (= 2.1-6.1+b2), libjbig0 (= 2.1-6.1+b2), libjpeg-dev (= 1:2.1.5-4), libjpeg62-turbo (= 1:2.1.5-4), libjpeg62-turbo-dev (= 1:2.1.5-4), libjq1 (= 1.8.1-4), libjs-jquery (= 3.7.1+dfsg+~3.5.33-1), libjs-sphinxdoc (= 8.2.3-8), libk5crypto3 (= 1.21.3-5), libkadm5clnt-mit12 (= 1.21.3-5), libkadm5srv-mit12 (= 1.21.3-5), libkdb5-10t64 (= 1.21.3-5), libkeyutils1 (= 1.6.3-6), libkrb5-3 (= 1.21.3-5), libkrb5-dev (= 1.21.3-5), libkrb5support0 (= 1.21.3-5), liblapack3 (= 3.12.1-7), liblcms2-2 (= 2.16-2), libldap-dev (= 2.6.10+dfsg-1), libldap2 (= 2.6.10+dfsg-1), liblerc-dev (= 4.0.0+ds-5), liblerc4 (= 4.0.0+ds-5), libllvm17t64 (= 1:17.0.6-22+b3), libllvm19 (= 1:19.1.7-7), liblsan0 (= 15.2.0-7), liblz4-1 (= 1.10.0-4), liblz4-dev (= 1.10.0-4), liblzf1 (= 3.6-4+b3), liblzma-dev (= 5.8.1-2), liblzma5 (= 5.8.1-2), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmd4c0 (= 0.5.2-2+b1), libmmdb2-0 (= 2.0.22-1+b2), libmmdb2-dev (= 2.0.22-1+b2), libmount1 (= 2.41.2-4), libmpc3 (= 1.3.1-2), libmpfr6 (= 4.2.2-2), libmtdev1t64 (= 1.1.7-1), libmunge2 (= 0.5.16-1), libncursesw6 (= 6.5+20250216-2), libnetcdf22 (= 1:4.9.3-1+b1), libnettle8t64 (= 3.10.2-1), libnghttp2-14 (= 1.64.0-1.1+b1), libnghttp2-dev (= 1.64.0-1.1+b1), libnghttp3-9 (= 1.12.0-1), libnghttp3-dev (= 1.12.0-1), libngtcp2-16 (= 1.16.0-1), libngtcp2-crypto-gnutls8 (= 1.16.0-1), libngtcp2-crypto-ossl-dev (= 1.16.0-1), libngtcp2-crypto-ossl0 (= 1.16.0-1), libngtcp2-dev (= 1.16.0-1), libnl-3-200 (= 3.11.0-2), libnl-route-3-200 (= 3.11.0-2), libnotify4 (= 0.8.6-2), libnuma1 (= 2.0.19-1), libonig5 (= 6.9.10-1), libopengl-dev (= 1.7.0-1+b2), libopengl0 (= 1.7.0-1+b2), libopenjp2-7 (= 2.5.3-2.1), libopenmpi40 (= 5.0.8-10+b1), libp11-kit-dev (= 0.25.9-2), libp11-kit0 (= 0.25.9-2), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam-systemd (= 258.1-1), libpam0g (= 1.7.0-5), libpango-1.0-0 (= 1.56.3-2), libpangocairo-1.0-0 (= 1.56.3-2), libpangoft2-1.0-0 (= 1.56.3-2), libpciaccess0 (= 0.17-3+b3), libpcre2-16-0 (= 10.46-1), libpcre2-32-0 (= 10.46-1), libpcre2-8-0 (= 10.46-1), libperl5.40 (= 5.40.1-6), libpipeline1 (= 1.5.8-1), libpixman-1-0 (= 0.46.4-1), libpkgconf3 (= 1.8.1-4), libpmix2t64 (= 6.0.0+really5.0.8-1), libpng16-16t64 (= 1.6.50-1), libpopt0 (= 1.19+dfsg-2), libproc2-0 (= 2:4.0.4-9), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libpython3-all-dev (= 3.13.7-1), libpython3-dev (= 3.13.7-1), libpython3-stdlib (= 3.13.7-1), libpython3.13 (= 3.13.9-1), libpython3.13-dev (= 3.13.9-1), libpython3.13-minimal (= 3.13.9-1), libpython3.13-stdlib (= 3.13.9-1), libqhull-r8.0 (= 2020.2-7), libqt5core5t64 (= 5.15.17+dfsg-4), libqt5dbus5t64 (= 5.15.17+dfsg-4), libqt5designer5 (= 5.15.17-3), libqt5gui5t64 (= 5.15.17+dfsg-4), libqt5help5 (= 5.15.17-3), libqt5network5t64 (= 5.15.17+dfsg-4), libqt5opengl5t64 (= 5.15.17+dfsg-4), libqt5printsupport5t64 (= 5.15.17+dfsg-4), libqt5sql5t64 (= 5.15.17+dfsg-4), libqt5test5t64 (= 5.15.17+dfsg-4), libqt5widgets5t64 (= 5.15.17+dfsg-4), libqt5xml5t64 (= 5.15.17+dfsg-4), libraqm0 (= 0.10.3-1), librav1e0.8 (= 0.8.1-5), librdmacm1t64 (= 56.1-1+b1), libreadline8t64 (= 8.3-3), librtmp-dev (= 2.4+20151223.gitfa8646d.1-3), librtmp1 (= 2.4+20151223.gitfa8646d.1-3), libsasl2-2 (= 2.1.28+dfsg1-10), libsasl2-modules-db (= 2.1.28+dfsg1-10), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.9-2), libsemanage-common (= 3.9-1), libsemanage2 (= 3.9-1), libsensors-config (= 1:3.6.2-2), libsensors5 (= 1:3.6.2-2), libsepol2 (= 3.9-2), libsframe2 (= 2.45-8), libsharpyuv-dev (= 1.5.0-0.1), libsharpyuv0 (= 1.5.0-0.1), libsm6 (= 2:1.2.6-1), libsmartcols1 (= 2.41.2-4), libsqlite3-0 (= 3.46.1-8), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.5.4-1), libssl3t64 (= 3.5.4-1), libssm-dev (= 1.4.0-2+b3), libssm2 (= 1.4.0-2+b3), libstdc++-14-dev (= 14.3.0-10), libstdc++-15-dev (= 15.2.0-7), libstdc++6 (= 15.2.0-7), libsvtav1enc2 (= 2.3.0+dfsg-1), libsystemd-shared (= 258.1-1), libsystemd0 (= 258.1-1), libsz2 (= 1.1.4-2), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libtcl8.6 (= 8.6.17+dfsg-1), libthai-data (= 0.1.29-2), libthai0 (= 0.1.29-2+b1), libtiff-dev (= 4.7.1-1), libtiff6 (= 4.7.1-1), libtiffxx6 (= 4.7.1-1), libtinfo6 (= 6.5+20250216-2), libtk8.6 (= 8.6.17-1), libtool (= 2.5.4-7), libtsan2 (= 15.2.0-7), libubsan1 (= 15.2.0-7), libuchardet0 (= 0.0.8-2), libucx0 (= 1.19.0+ds-1), libudev1 (= 258.1-1), libunbound8 (= 1.24.1-1), libunistring5 (= 1.3-2), libuuid1 (= 2.41.2-4), libvulkan1 (= 1.4.321.0-1), libwacom-common (= 2.16.1-1), libwacom9 (= 2.16.1-1), libwayland-client0 (= 1.24.0-2+b1), libwayland-cursor0 (= 1.24.0-2+b1), libwayland-egl1 (= 1.24.0-2+b1), libwebp-dev (= 1.5.0-0.1), libwebp7 (= 1.5.0-0.1), libwebpdecoder3 (= 1.5.0-0.1), libwebpdemux2 (= 1.5.0-0.1), libwebpmux3 (= 1.5.0-0.1), libwxbase3.2-1t64 (= 3.2.8+dfsg-2), libwxgtk-gl3.2-1t64 (= 3.2.8+dfsg-2), libwxgtk3.2-1t64 (= 3.2.8+dfsg-2), libx11-6 (= 2:1.8.12-1), libx11-data (= 2:1.8.12-1), libx11-dev (= 2:1.8.12-1), libx11-xcb1 (= 2:1.8.12-1), libxau-dev (= 1:1.0.11-1), libxau6 (= 1:1.0.11-1), libxcb-dri3-0 (= 1.17.0-2+b1), libxcb-glx0 (= 1.17.0-2+b1), libxcb-icccm4 (= 0.4.2-1), libxcb-image0 (= 0.4.0-2+b2), libxcb-keysyms1 (= 0.4.1-1), libxcb-present0 (= 1.17.0-2+b1), libxcb-randr0 (= 1.17.0-2+b1), libxcb-render-util0 (= 0.3.10-1), libxcb-render0 (= 1.17.0-2+b1), libxcb-shape0 (= 1.17.0-2+b1), libxcb-shm0 (= 1.17.0-2+b1), libxcb-sync1 (= 1.17.0-2+b1), libxcb-util1 (= 0.4.1-1), libxcb-xfixes0 (= 1.17.0-2+b1), libxcb-xinerama0 (= 1.17.0-2+b1), libxcb-xinput0 (= 1.17.0-2+b1), libxcb-xkb1 (= 1.17.0-2+b1), libxcb1 (= 1.17.0-2+b1), libxcb1-dev (= 1.17.0-2+b1), libxcomposite1 (= 1:0.4.6-1), libxcursor1 (= 1:1.2.3-1), libxdamage1 (= 1:1.1.6-1+b2), libxdmcp-dev (= 1:1.1.5-1), libxdmcp6 (= 1:1.1.5-1), libxext6 (= 2:1.3.4-1+b3), libxfixes3 (= 1:6.0.0-2+b4), libxft2 (= 2.3.6-1+b4), libxi6 (= 2:1.8.2-1), libxinerama1 (= 2:1.1.4-3+b4), libxkbcommon-x11-0 (= 1.7.0-2.1), libxkbcommon0 (= 1.7.0-2.1), libxml2-16 (= 2.15.1+dfsg-0.2), libxnvctrl0 (= 535.171.04-1+b2), libxrandr2 (= 2:1.5.4-1+b3), libxrender1 (= 1:0.9.12-1), libxshmfence1 (= 1.3.3-1), libxslt1.1 (= 1.1.43-0.3), libxss1 (= 1:1.2.3-1+b3), libxtst6 (= 2:1.2.5-1), libxxf86vm1 (= 1:1.1.4-1+b4), libxxhash-dev (= 0.8.3-2), libxxhash0 (= 0.8.3-2), libyuv0 (= 0.0.1919.20250919-1), libz3-4 (= 4.13.3-1), libzopfli1 (= 1.0.3-3), libzstd-dev (= 1.5.7+dfsg-2), libzstd1 (= 1.5.7+dfsg-2), linux-libc-dev (= 6.16.12-2), login.defs (= 1:4.18.0-2), m4 (= 1.4.20-2), make (= 4.4.1-2), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), media-types (= 14.0.0), mesa-libgallium (= 25.2.5-1), mount (= 2.41.2-4), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), netbase (= 6.5), nettle-dev (= 3.10.2-1), ocl-icd-libopencl1 (= 2.3.4-1), openssl (= 3.5.4-1), openssl-provider-legacy (= 3.5.4-1), passwd (= 1:4.18.0-2), patch (= 2.8-2), perl (= 5.40.1-6), perl-base (= 5.40.1-6), perl-modules-5.40 (= 5.40.1-6), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-9), pybind11-dev (= 3.0.1-2), pymol-data (= 3.1.0+dfsg-1), python-matplotlib-data (= 3.10.7+dfsg1-1), python3 (= 3.13.7-1), python3-all (= 3.13.7-1), python3-all-dev (= 3.13.7-1), python3-attr (= 25.4.0-1), python3-autocommand (= 2.2.2-3), python3-biopython (= 1.85+dfsg-5), python3-brotli (= 1.1.0-2+b7), python3-cairo (= 1.27.0-2), python3-certifi (= 2025.1.31+ds-1), python3-chardet (= 5.2.0+dfsg-2), python3-charset-normalizer (= 3.4.3-1), python3-contourpy (= 1.3.1-2), python3-cycler (= 0.12.1-2), python3-dateutil (= 2.9.0-4), python3-decorator (= 5.2.1-2), python3-dev (= 3.13.7-1), python3-flexcache (= 0.3-2), python3-flexparser (= 0.4-1), python3-fonttools (= 4.57.0-2), python3-freetype (= 2.5.1-2), python3-fs (= 2.4.16-8), python3-h5py (= 3.14.0-3), python3-h5py-serial (= 3.14.0-3), python3-hdf5plugin (= 5.1.0-1), python3-idna (= 3.10-1), python3-inflect (= 7.5.0-1), python3-iniconfig (= 2.1.0-1), python3-jaraco.context (= 6.0.1-1), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-kiwisolver (= 1.4.10~rc0-1), python3-legacy-cgi (= 2.6.3-1), python3-lxml (= 6.0.2-1), python3-lz4 (= 4.4.4+dfsg-3), python3-matplotlib (= 3.10.7+dfsg1-1), python3-minimal (= 3.13.7-1), python3-more-itertools (= 10.8.0-1), python3-mpmath (= 1.3.0-2), python3-mrcfile (= 1.5.4-2), python3-msgpack (= 1.0.3-3+b5), python3-natsort (= 8.4.0-1), python3-numpy (= 1:2.3.3+ds-3), python3-numpy-dev (= 1:2.3.3+ds-3), python3-nxmx (= 0.0.4-1), python3-opengl (= 3.1.10+dfsg-1), python3-ordered-set (= 4.1.0-1), python3-packaging (= 25.0-1), python3-pil (= 12.0.0-1), python3-pil.imagetk (= 12.0.0-1), python3-pint (= 0.25-1), python3-pip (= 25.2+dfsg-1), python3-pkg-resources (= 78.1.1-0.1), python3-platformdirs (= 4.4.0-1), python3-pluggy (= 1.6.0-1), python3-procrunner (= 2.3.3-2), python3-psutil (= 7.1.0-1), python3-pycbf (= 0.9.7+dfsg1-5.1), python3-pygments (= 2.18.0+dfsg-2), python3-pymol (= 3.1.0+dfsg-1+b1), python3-pyparsing (= 3.1.3-1), python3-pyqt5 (= 5.15.11+dfsg-3), python3-pyqt5.qtopengl (= 5.15.11+dfsg-3), python3-pyqt5.sip (= 12.17.1-1), python3-pytest (= 8.4.2-1), python3-reportlab (= 4.4.4-2), python3-requests (= 2.32.5+dfsg-1), python3-rlpycairo (= 0.3.0-4), python3-scipy (= 1.16.2-3), python3-setuptools (= 78.1.1-0.1), python3-six (= 1.17.0-1), python3-sympy (= 1.14.0-2), python3-tk (= 3.13.9-1), python3-tqdm (= 4.67.1-6), python3-typeguard (= 4.4.4-1), python3-typing-extensions (= 4.15.0-1), python3-ufolib2 (= 0.17.1+dfsg1-1), python3-urllib3 (= 2.5.0-1), python3-wheel (= 0.46.1-2), python3-wxgtk4.0 (= 4.2.3+dfsg-2), python3-zipp (= 3.23.0-1), python3-zopfli (= 0.2.3.post1-1), python3.13 (= 3.13.9-1), python3.13-dev (= 3.13.9-1), python3.13-minimal (= 3.13.9-1), python3.13-tk (= 3.13.9-1), readline-common (= 8.3-3), rpcsvc-proto (= 1.4.3-1+b1), rsync (= 3.4.1+ds1-6), scons (= 4.8.1+dfsg-1), sed (= 4.9-2+b1), sensible-utils (= 0.0.26), sfftw-dev (= 2.1.5-7+b1), sfftw2 (= 2.1.5-7+b1), sgml-base (= 1.31+nmu1), shared-mime-info (= 2.4-5+b3), sphinx-rtd-theme-common (= 3.0.2+dfsg-3), systemd (= 258.1-1), systemd-sysv (= 258.1-1), sysvinit-utils (= 3.15-5), tar (= 1.35+dfsg-3.1), tk8.6-blt2.5 (= 2.5.3+dfsg-8), tzdata (= 2025b-5), unicode-data (= 16.0.0-1), util-linux (= 2.41.2-4), w3c-sgml-lib (= 1.3-3), x11-common (= 1:7.7+26), x11proto-dev (= 2024.1-1), xfonts-encodings (= 1:1.0.4-2.2), xfonts-utils (= 1:7.7+7), xkb-data (= 2.42-1), xml-core (= 0.19), xorg-sgml-doctools (= 1:1.11-1.1), xtrans-dev (= 1.6.0-1), xz-utils (= 5.8.1-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=8" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1761327529" +------------------------------------------------------------------------------+ | Package contents Sat, 29 Nov 2025 21:20:12 +0000 | +------------------------------------------------------------------------------+ libcctbx-dev_2025.2+ds2+~3.23.0+ds1-1_arm64.deb ----------------------------------------------- new Debian package, version 2.0. size 1161820 bytes: control archive=23336 bytes. 2955 bytes, 55 lines control 63779 bytes, 827 lines md5sums Package: libcctbx-dev Source: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 Architecture: arm64 Maintainer: Debian Science Maintainers Installed-Size: 8607 Depends: libann-cctbx-dev, libboost-python-dev, libccp4-dev, libcctbx0 (= 2025.2+ds2+~3.23.0+ds1-1) Section: devel Priority: optional Homepage: https://github.com/cctbx/cctbx_project Description: Computational Crystallography Toolbox - headers Computational Crystallography Toolbox contains following modules: - annlib_adaptbx: - boost_adaptbx: wrappers for Boost functionality in CCTBX - cbflib_adaptbx: - ccp4io_adaptbx: - cctbx: Libraries for general crystallographic applications, useful for both small-molecule and macro-molecular crystallography. - cma_es: - crys3d: Modules for the display of molecules, electron density, and reciprocal space data. - dxtbx: The Diffraction Image Toolbox, a library for handling X-ray detector data of arbitrary complexity from a variety of standard formats. - fable: Fortran EMulation library for porting Fortran77 to C++. - gltbx: Python bindings for OpenGL - iotbx: Working with common crystallographic file formats. - libtbx: The build system common to all other modules. This includes a very thin wrapper around the SCons software construction tool. It also contains many useful frameworks and utilities to simplify application development, including tools for regression testing, parallelization across multiprocessor systems and managed clusters, and a flexible, modular configuration syntax called PHIL (Python Hierarchial Interface Language) used throughout the CCTBX. - mmtbx: Functionality specific to macromolecular crystallography. This includes all of the machinery required for setup of geometry restraints, bulk solvent correction and scaling, analysis of macromolecular diffraction data, calculation of weighted map coefficients, and most of the methods implemented in phenix.refine. The majority of infrastructure for the MolProbity validation server (and Phenix equivalent) is also located here. - omptbx: OpenMP interface. - rstbx: A reciprocal space toolbox to autoindex small molecule Bragg diffraction, given the reciprocal space vectors. - scitbx: General scientific calculations. his includes a family of high-level C++ array types, a fast Fourier transform library, and a C++ port of the popular L-BFGS quasi-Newton minimizer. - smtbx: Small-Molecule crystallography. - spotfinder: - tbxx: - wxtbx: wxPython controls used in the Phenix GUI and various utilities . This package provide everythings needed to link against the cctbx libraries. drwxr-xr-x root/root 0 2025-10-24 17:38 ./ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/annlib_adaptbx/ -rw-r--r-- root/root 2068 2025-10-24 17:38 ./usr/include/annlib_adaptbx/ann_adaptor.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/boost_adaptbx/ -rw-r--r-- root/root 933 2025-03-01 14:39 ./usr/include/boost_adaptbx/boost_range_python.hpp -rw-r--r-- root/root 930 2025-03-01 14:39 ./usr/include/boost_adaptbx/convertible.h -rw-r--r-- root/root 3412 2025-03-01 14:39 ./usr/include/boost_adaptbx/exporting.hpp -rw-r--r-- root/root 3770 2025-03-01 14:39 ./usr/include/boost_adaptbx/floating_point_exceptions.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/ -rw-r--r-- root/root 1588 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/graph_export_adaptor.hpp -rw-r--r-- root/root 2301 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/graph_type.hpp -rw-r--r-- root/root 9259 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/maximum_clique_greedy.hpp -rw-r--r-- root/root 13452 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/maximum_clique_rascal.hpp -rw-r--r-- root/root 7254 2025-03-01 14:39 ./usr/include/boost_adaptbx/graph/vertex_map.hpp -rw-r--r-- root/root 2046 2025-03-01 14:39 ./usr/include/boost_adaptbx/hash.h -rw-r--r-- root/root 1442 2025-03-01 14:39 ./usr/include/boost_adaptbx/iterator_range.h -rw-r--r-- root/root 2380 2025-03-01 14:39 ./usr/include/boost_adaptbx/optional_conversions.h -rw-r--r-- root/root 160 2025-03-01 14:39 ./usr/include/boost_adaptbx/precompiled.h -rw-r--r-- root/root 15836 2025-03-01 14:39 ./usr/include/boost_adaptbx/python_streambuf.h -rw-r--r-- root/root 2273 2025-03-01 14:39 ./usr/include/boost_adaptbx/std_pair_conversion.h -rw-r--r-- root/root 742 2025-03-01 14:39 ./usr/include/boost_adaptbx/std_pair_fwd.h -rw-r--r-- root/root 1177 2025-03-01 14:39 ./usr/include/boost_adaptbx/swig_arg.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/boost_adaptbx/tests/ -rw-r--r-- root/root 1847 2025-03-01 14:39 ./usr/include/boost_adaptbx/tests/tst_optional_copy.h -rw-r--r-- root/root 1499 2025-03-01 14:39 ./usr/include/boost_adaptbx/tuple_conversion.h -rw-r--r-- root/root 380 2025-10-24 17:38 ./usr/include/boost_adaptbx/type_id_eq.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/ -rw-r--r-- root/root 858 2025-03-01 14:39 ./usr/include/cbflib_adaptbx/detectors/basic.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/boost_python/ -rw-r--r-- root/root 8255 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/boost_python/cbf_binary_adaptor.h -rw-r--r-- root/root 1764 2025-03-01 14:39 ./usr/include/cbflib_adaptbx/detectors/boost_python/general_cbf_write.h -rw-r--r-- root/root 305 2025-03-01 14:39 ./usr/include/cbflib_adaptbx/detectors/buffer_based_service.h -rw-r--r-- root/root 6894 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/cbf_adaptor.h -rw-r--r-- root/root 850 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/cbf_byte_offset_optimized.h -rw-r--r-- root/root 2701 2025-10-24 17:38 ./usr/include/cbflib_adaptbx/detectors/mar_adaptor.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ -rw-r--r-- root/root 2043 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_ccplib_fem.hpp -rw-r--r-- root/root 3515 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_diskio_fem.hpp -rw-r--r-- root/root 2389 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_fftlib_fem.hpp -rw-r--r-- root/root 535 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_library_fem.hpp -rw-r--r-- root/root 1896 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_maplib_fem.hpp -rw-r--r-- root/root 8765 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_mtzlib_fem.hpp -rw-r--r-- root/root 892 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_other_fem.hpp -rw-r--r-- root/root 1656 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_parser_f.h -rw-r--r-- root/root 1398 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_parser_fem.hpp -rw-r--r-- root/root 4502 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/ccp4_symlib_fem.hpp -rw-r--r-- root/root 17883 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/cmaplib_f.h -rw-r--r-- root/root 23922 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/cmtzlib_f.h -rw-r--r-- root/root 15628 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/csymlib_f.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/dev/ -rw-r--r-- root/root 703 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/dev/fftlib.hpp -rw-r--r-- root/root 611 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/library_f.h -rw-r--r-- root/root 345 2025-10-24 17:38 ./usr/include/ccp4io_adaptbx/printf_wrappers.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/cctbx/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/ -rw-r--r-- root/root 16795 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/adp_restraints.h -rw-r--r-- root/root 12123 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/adp_similarity.h -rw-r--r-- root/root 5376 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/aniso_restraints.h -rw-r--r-- root/root 2381 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/fixed_u_eq_adp.h -rw-r--r-- root/root 2117 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/isotropic_adp.h -rw-r--r-- root/root 6375 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/rigid_bond.h -rw-r--r-- root/root 8016 2025-03-01 14:39 ./usr/include/cctbx/adp_restraints/rigu.h -rw-r--r-- root/root 28407 2025-03-01 14:39 ./usr/include/cctbx/adptbx.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/adptbx/ -rw-r--r-- root/root 9714 2025-03-01 14:39 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6213 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/bond_sorted.h -rw-r--r-- root/root 10846 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/chirality.h -rw-r--r-- root/root 22165 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/dihedral.h -rw-r--r-- root/root 8931 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/motif.h -rw-r--r-- root/root 158 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/namespace.h -rw-r--r-- root/root 29326 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/nonbonded.h -rw-r--r-- root/root 7478 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/nonbonded_sorted.h -rw-r--r-- root/root 33629 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/parallelity.h -rw-r--r-- root/root 15757 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/planarity.h -rw-r--r-- root/root 6735 2025-03-01 14:39 ./usr/include/cctbx/geometry_restraints/proxy_select.h -rw-r--r-- root/root 1086 2025-03-01 14:39 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14:39 ./usr/include/cctbx/math/mod.h -rw-r--r-- root/root 3845 2025-03-01 14:39 ./usr/include/cctbx/miller.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/miller/ -rw-r--r-- root/root 2269 2025-03-01 14:39 ./usr/include/cctbx/miller/amplitude_normalisation.h -rw-r--r-- root/root 9005 2025-03-01 14:39 ./usr/include/cctbx/miller/asu.h -rw-r--r-- root/root 6314 2025-03-01 14:39 ./usr/include/cctbx/miller/bins.h -rw-r--r-- root/root 1917 2025-03-01 14:39 ./usr/include/cctbx/miller/change_basis.h -rw-r--r-- root/root 7029 2025-03-01 14:39 ./usr/include/cctbx/miller/expand_to_p1.h -rw-r--r-- root/root 4463 2025-03-01 14:39 ./usr/include/cctbx/miller/f_calc_map.h -rw-r--r-- root/root 3823 2025-03-01 14:39 ./usr/include/cctbx/miller/index_generator.h -rw-r--r-- root/root 2578 2025-03-01 14:39 ./usr/include/cctbx/miller/index_span.h -rw-r--r-- root/root 12427 2025-03-01 14:39 ./usr/include/cctbx/miller/lookup_utils.h -rw-r--r-- root/root 2185 2025-03-01 14:39 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drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/multipolar/ -rw-r--r-- root/root 1824 2025-03-01 14:39 ./usr/include/cctbx/multipolar/aspherical.h -rw-r--r-- root/root 2029 2025-03-01 14:39 ./usr/include/cctbx/restraints.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/ -rw-r--r-- root/root 1655 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/basic.h -rw-r--r-- root/root 4194 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/brick.h -rw-r--r-- root/root 10494 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/change_of_basis_op.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/ -rw-r--r-- root/root 1762 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/asymmetric_unit.h -rw-r--r-- root/root 11776 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/direct_space_asu/proto/cut.h -rw-r--r-- root/root 7108 2025-03-01 14:39 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./usr/include/cctbx/sgtbx/miller_ops.h -rw-r--r-- root/root 1388 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/operator_from_axis_direction.h -rw-r--r-- root/root 2961 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/parse_string.h -rw-r--r-- root/root 5057 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/phase_info.h -rw-r--r-- root/root 3992 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/reciprocal_space_asu.h -rw-r--r-- root/root 3959 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/reciprocal_space_reference_asu.h -rw-r--r-- root/root 2553 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/reference_settings.h -rw-r--r-- root/root 11934 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rot_mx.h -rw-r--r-- root/root 338 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rot_mx_hash.h -rw-r--r-- root/root 1423 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rot_mx_info.h -rw-r--r-- root/root 1180 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rotation_matrices.h -rw-r--r-- root/root 684 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/row_echelon_solve.h -rw-r--r-- root/root 20589 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rt_mx.h -rw-r--r-- root/root 386 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/rt_mx_hash.h -rw-r--r-- root/root 9476 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/search_symmetry.h -rw-r--r-- root/root 859 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/select_generators.h -rw-r--r-- root/root 7767 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/seminvariant.h -rw-r--r-- root/root 8189 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/site_constraints.h -rw-r--r-- root/root 14431 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/site_symmetry.h -rw-r--r-- root/root 9909 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/site_symmetry_table.h -rw-r--r-- root/root 802 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/smith_normal_form.h -rw-r--r-- root/root 27947 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/space_group.h -rw-r--r-- root/root 780 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/space_group_hash.h -rw-r--r-- root/root 10467 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/space_group_type.h -rw-r--r-- root/root 20819 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/sym_equiv_sites.h -rw-r--r-- root/root 13091 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/symbols.h -rw-r--r-- root/root 14006 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/sys_abs_equiv.h -rw-r--r-- root/root 16317 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tensor_rank_2.h -rw-r--r-- root/root 7643 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tensors.h -rw-r--r-- root/root 1629 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tr_group.h -rw-r--r-- root/root 391 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tr_group_hash.h -rw-r--r-- root/root 6560 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tr_vec.h -rw-r--r-- root/root 370 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/tr_vec_hash.h -rw-r--r-- root/root 458 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/utils.h -rw-r--r-- root/root 10050 2025-03-01 14:39 ./usr/include/cctbx/sgtbx/wyckoff.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/symmetry_search/ -rw-r--r-- root/root 6094 2025-03-01 14:39 ./usr/include/cctbx/symmetry_search/translation_refinement.h -rw-r--r-- root/root 492 2025-03-01 14:39 ./usr/include/cctbx/tagged_value.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/translation_search/ -rw-r--r-- root/root 2224 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_nv1995.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_nv1995/ -rw-r--r-- root/root 2516 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_nv1995/combinations.h -rw-r--r-- root/root 1521 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_nv1995/intermediates.h -rw-r--r-- root/root 8723 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_nv1995/summations.h -rw-r--r-- root/root 4175 2025-03-01 14:39 ./usr/include/cctbx/translation_search/fast_terms.h -rw-r--r-- root/root 138 2025-03-01 14:39 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root/root 27733 2025-03-01 14:39 ./usr/include/cctbx/xray/f_model.h -rw-r--r-- root/root 30956 2025-03-01 14:39 ./usr/include/cctbx/xray/fast_gradients.h -rw-r--r-- root/root 1092 2025-03-01 14:39 ./usr/include/cctbx/xray/gradient_flags.h -rw-r--r-- root/root 17921 2025-03-01 14:39 ./usr/include/cctbx/xray/gradients_direct.h -rw-r--r-- root/root 11438 2025-03-01 14:39 ./usr/include/cctbx/xray/grouped_data.h -rw-r--r-- root/root 3294 2025-03-01 14:39 ./usr/include/cctbx/xray/hr_ht_cache.h -rw-r--r-- root/root 9432 2025-03-01 14:39 ./usr/include/cctbx/xray/minimization.h -rw-r--r-- root/root 17272 2025-03-01 14:39 ./usr/include/cctbx/xray/observations.h -rw-r--r-- root/root 223 2025-03-01 14:39 ./usr/include/cctbx/xray/packing_order.h -rw-r--r-- root/root 2809 2025-03-01 14:39 ./usr/include/cctbx/xray/parameter_map.h -rw-r--r-- root/root 9310 2025-03-01 14:39 ./usr/include/cctbx/xray/sampled_model_density.h -rw-r--r-- root/root 25770 2025-03-01 14:39 ./usr/include/cctbx/xray/sampling_base.h -rw-r--r-- root/root 2922 2025-03-01 14:39 ./usr/include/cctbx/xray/sampling_loop.h -rw-r--r-- root/root 18333 2025-03-01 14:39 ./usr/include/cctbx/xray/scatterer.h -rw-r--r-- root/root 14661 2025-03-01 14:39 ./usr/include/cctbx/xray/scatterer_flags.h -rw-r--r-- root/root 15203 2025-03-01 14:39 ./usr/include/cctbx/xray/scatterer_utils.h -rw-r--r-- root/root 10118 2025-03-01 14:39 ./usr/include/cctbx/xray/scattering_type_registry.h -rw-r--r-- root/root 776 2025-03-01 14:39 ./usr/include/cctbx/xray/sigmaa.h -rw-r--r-- root/root 6408 2025-03-01 14:39 ./usr/include/cctbx/xray/structure_factors_direct.h -rw-r--r-- root/root 3801 2025-03-01 14:39 ./usr/include/cctbx/xray/structure_factors_simple.h -rw-r--r-- root/root 11643 2025-03-01 14:39 ./usr/include/cctbx/xray/targets.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/ -rw-r--r-- root/root 2968 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/common_results.h -rw-r--r-- root/root 6564 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/correlation.h -rw-r--r-- root/root 6188 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/least_squares.h -rw-r--r-- root/root 5596 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/mlf.h -rw-r--r-- root/root 10624 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/mlhl.h -rw-r--r-- root/root 4725 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/mli.h -rw-r--r-- root/root 14039 2025-03-01 14:39 ./usr/include/cctbx/xray/targets/shelxl_wght_ls.hpp -rw-r--r-- root/root 1778 2025-03-01 14:39 ./usr/include/cctbx/xray/twin_component.h -rw-r--r-- root/root 53162 2025-03-01 14:39 ./usr/include/cctbx/xray/twin_targets.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cma_es/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/cma_es/cma/ -rw-r--r-- root/root 4266 2025-03-01 14:39 ./usr/include/cma_es/cma/cmaes.h -rw-r--r-- root/root 2405 2025-03-01 14:39 ./usr/include/cma_es/cma/cmaes_interface.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/dxtbx/ drwxr-xr-x root/root 0 2025-01-08 11:53 ./usr/include/dxtbx/array_family/ -rw-r--r-- root/root 15026 2025-01-08 11:53 ./usr/include/dxtbx/array_family/flex_table.h -rw-r--r-- root/root 40157 2025-01-08 11:53 ./usr/include/dxtbx/array_family/flex_table_suite.h -rw-r--r-- root/root 284 2025-01-08 11:53 ./usr/include/dxtbx/array_family/ref_pickle_double_buffered.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/dxtbx/boost_python/ -rw-r--r-- root/root 590 2025-01-08 11:53 ./usr/include/dxtbx/boost_python/compression.h -rw-r--r-- root/root 2261 2025-01-08 11:53 ./usr/include/dxtbx/error.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/dxtbx/format/ drwxr-xr-x root/root 0 2025-01-08 11:53 ./usr/include/dxtbx/format/boost_python/ -rw-r--r-- root/root 202 2025-01-08 11:53 ./usr/include/dxtbx/format/boost_python/cbf_read_buffer.h -rw-r--r-- root/root 7657 2025-01-08 11:53 ./usr/include/dxtbx/format/image.h -rw-r--r-- root/root 40730 2025-01-08 11:53 ./usr/include/dxtbx/imageset.h drwxr-xr-x root/root 0 2025-01-08 11:53 ./usr/include/dxtbx/masking/ -rw-r--r-- root/root 12547 2025-01-08 11:53 ./usr/include/dxtbx/masking/goniometer_shadow_masking.h -rw-r--r-- root/root 7330 2025-01-08 11:53 ./usr/include/dxtbx/masking/masking.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/dxtbx/model/ -rw-r--r-- root/root 32090 2025-01-08 11:53 ./usr/include/dxtbx/model/beam.h drwxr-xr-x root/root 0 2025-01-08 11:53 ./usr/include/dxtbx/model/boost_python/ -rw-r--r-- root/root 6976 2025-01-08 11:53 ./usr/include/dxtbx/model/boost_python/pickle_suite.h -rw-r--r-- root/root 2383 2025-01-08 11:53 ./usr/include/dxtbx/model/boost_python/to_from_dict.h -rw-r--r-- root/root 51769 2025-01-08 11:53 ./usr/include/dxtbx/model/crystal.h -rw-r--r-- root/root 24739 2025-01-08 11:53 ./usr/include/dxtbx/model/detector.h -rw-r--r-- root/root 7095 2025-01-08 11:53 ./usr/include/dxtbx/model/experiment.h -rw-r--r-- root/root 18502 2025-01-08 11:53 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root/root 3545 2025-01-08 11:53 ./usr/include/dxtbx/model/spectrum.h -rw-r--r-- root/root 13860 2025-01-08 11:53 ./usr/include/dxtbx/model/virtual_panel.h -rw-r--r-- root/root 246 2025-03-01 14:39 ./usr/include/fem.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/fem/ -rw-r--r-- root/root 972 2025-03-01 14:39 ./usr/include/fem/arr.hpp -rw-r--r-- root/root 2435 2025-03-01 14:39 ./usr/include/fem/arr_and_str_indices.hpp -rw-r--r-- root/root 4671 2025-03-01 14:39 ./usr/include/fem/arr_ref.hpp -rw-r--r-- root/root 3650 2025-03-01 14:39 ./usr/include/fem/arr_size.hpp -rw-r--r-- root/root 1425 2025-03-01 14:39 ./usr/include/fem/close_chain.hpp -rw-r--r-- root/root 2669 2025-03-01 14:39 ./usr/include/fem/common.hpp -rw-r--r-- root/root 7532 2025-03-01 14:39 ./usr/include/fem/data.hpp -rw-r--r-- root/root 2345 2025-03-01 14:39 ./usr/include/fem/data_of_type.hpp -rw-r--r-- root/root 668 2025-03-01 14:39 ./usr/include/fem/data_type_star.hpp -rw-r--r-- root/root 12115 2025-03-01 14:39 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./usr/include/fem/read.hpp -rw-r--r-- root/root 593 2025-03-01 14:39 ./usr/include/fem/size_t.hpp -rw-r--r-- root/root 166 2025-03-01 14:39 ./usr/include/fem/star.hpp -rw-r--r-- root/root 1403 2025-03-01 14:39 ./usr/include/fem/stop.hpp -rw-r--r-- root/root 3031 2025-03-01 14:39 ./usr/include/fem/str.hpp -rw-r--r-- root/root 8322 2025-03-01 14:39 ./usr/include/fem/str_arr_ref.hpp -rw-r--r-- root/root 4628 2025-03-01 14:39 ./usr/include/fem/str_ref.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/fem/utils/ -rw-r--r-- root/root 1587 2025-03-01 14:39 ./usr/include/fem/utils/char.hpp -rw-r--r-- root/root 4884 2025-03-01 14:39 ./usr/include/fem/utils/double_to_string.hpp -rw-r--r-- root/root 3927 2025-03-01 14:39 ./usr/include/fem/utils/equivalence.hpp -rw-r--r-- root/root 450 2025-03-01 14:39 ./usr/include/fem/utils/int_types.hpp -rw-r--r-- root/root 1757 2025-03-01 14:39 ./usr/include/fem/utils/misc.hpp -rw-r--r-- root/root 2779 2025-03-01 14:39 ./usr/include/fem/utils/path.hpp 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./usr/include/gltbx/error_utils.h -rw-r--r-- root/root 5200 2025-03-01 14:39 ./usr/include/gltbx/fonts_ucs.h -rw-r--r-- root/root 570164 2025-03-01 14:39 ./usr/include/gltbx/glext.h -rw-r--r-- root/root 574 2025-03-01 14:39 ./usr/include/gltbx/include_opengl.h -rw-r--r-- root/root 7498 2025-03-01 14:39 ./usr/include/gltbx/pointer_args_bpl.h -rw-r--r-- root/root 10009 2025-03-01 14:39 ./usr/include/gltbx/quadrics.h -rw-r--r-- root/root 655 2025-03-01 14:39 ./usr/include/gltbx/special_wrapper_support.h -rw-r--r-- root/root 317 2025-03-01 14:39 ./usr/include/gltbx/util.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/iotbx/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/iotbx/detectors/ -rw-r--r-- root/root 963 2025-03-01 14:39 ./usr/include/iotbx/detectors/bruker.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/iotbx/detectors/context/ -rw-r--r-- root/root 2717 2025-03-01 14:39 ./usr/include/iotbx/detectors/context/spot_xy_convention.h -rw-r--r-- root/root 42787 2025-03-01 14:39 ./usr/include/iotbx/detectors/display.h -rw-r--r-- root/root 1791 2025-03-01 14:39 ./usr/include/iotbx/detectors/image_divider.h -rw-r--r-- root/root 9644 2025-03-01 14:39 ./usr/include/iotbx/detectors/scanbox.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/iotbx/dsn6/ -rw-r--r-- root/root 4813 2025-03-01 14:39 ./usr/include/iotbx/dsn6/dsn6.hpp -rw-r--r-- root/root 2301 2025-03-01 14:39 ./usr/include/iotbx/error.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/iotbx/mtz/ -rw-r--r-- root/root 8100 2025-03-01 14:39 ./usr/include/iotbx/mtz/batch.h -rw-r--r-- root/root 6803 2025-03-01 14:39 ./usr/include/iotbx/mtz/column.h -rw-r--r-- root/root 2630 2025-03-01 14:39 ./usr/include/iotbx/mtz/crystal.h -rw-r--r-- root/root 2685 2025-03-01 14:39 ./usr/include/iotbx/mtz/dataset.h -rw-r--r-- root/root 18582 2025-03-01 14:39 ./usr/include/iotbx/mtz/object.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/iotbx/pdb/ -rw-r--r-- root/root 10301 2025-03-01 14:39 ./usr/include/iotbx/pdb/common_residue_names.h -rw-r--r-- root/root 44718 2025-03-01 14:39 ./usr/include/iotbx/pdb/hierarchy.h -rw-r--r-- root/root 3430 2025-03-01 14:39 ./usr/include/iotbx/pdb/hierarchy_atoms.h -rw-r--r-- root/root 4507 2025-03-01 14:39 ./usr/include/iotbx/pdb/hierarchy_bpl.h -rw-r--r-- root/root 705 2025-03-01 14:39 ./usr/include/iotbx/pdb/hybrid_36_c.h -rw-r--r-- root/root 661 2025-03-01 14:39 ./usr/include/iotbx/pdb/hybrid_36_cpp.h -rw-r--r-- root/root 13241 2025-03-01 14:39 ./usr/include/iotbx/pdb/input.h -rw-r--r-- root/root 24726 2025-03-01 14:39 ./usr/include/iotbx/pdb/modified_aa_names.h -rw-r--r-- root/root 9390 2025-03-01 14:39 ./usr/include/iotbx/pdb/modified_rna_dna_names.h -rw-r--r-- root/root 709 2025-03-01 14:39 ./usr/include/iotbx/pdb/namespace.h -rw-r--r-- root/root 29683 2025-03-01 14:39 ./usr/include/iotbx/pdb/rna_dna_atom_names.h -rw-r--r-- root/root 6531 2025-03-01 14:39 ./usr/include/iotbx/pdb/small_str.h -rw-r--r-- root/root 653 2025-03-01 14:39 ./usr/include/iotbx/pdb/utils.h -rw-r--r-- root/root 1264 2025-03-01 14:39 ./usr/include/iotbx/pdb/write_utils.h -rw-r--r-- root/root 669 2025-03-01 14:39 ./usr/include/iotbx/pdb/write_utils_bpl.h -rw-r--r-- root/root 7337 2025-03-01 14:39 ./usr/include/iotbx/pdb/xray_structure.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/iotbx/shelx/ -rw-r--r-- root/root 2813 2025-03-01 14:39 ./usr/include/iotbx/shelx/hklf.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/iotbx/xplor/ -rw-r--r-- root/root 1079 2025-03-01 14:39 ./usr/include/iotbx/xplor/map_reader.h -rw-r--r-- root/root 1293 2025-03-01 14:39 ./usr/include/iotbx/xplor/map_writer.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/alignment/ -rw-r--r-- root/root 3702 2025-03-01 14:39 ./usr/include/mmtbx/alignment/align.h -rw-r--r-- root/root 3410 2025-03-01 14:39 ./usr/include/mmtbx/alignment/alignment.h -rw-r--r-- root/root 5554 2025-03-01 14:39 ./usr/include/mmtbx/alignment/tables.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/building/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/building/loop_closure/ -rw-r--r-- root/root 3964 2025-03-01 14:39 ./usr/include/mmtbx/building/loop_closure/ccd.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/bulk_solvent/ -rw-r--r-- root/root 55010 2025-03-01 14:39 ./usr/include/mmtbx/bulk_solvent/bulk_solvent.h -rw-r--r-- root/root 6569 2025-03-01 14:39 ./usr/include/mmtbx/bulk_solvent/mosaic.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/den/ -rw-r--r-- root/root 3484 2025-03-01 14:39 ./usr/include/mmtbx/den/den.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/dynamics/ -rw-r--r-- root/root 1809 2025-03-01 14:39 ./usr/include/mmtbx/dynamics/dynamics.h -rw-r--r-- root/root 2174 2025-03-01 14:39 ./usr/include/mmtbx/error.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/f_model/ -rw-r--r-- root/root 11975 2025-03-01 14:39 ./usr/include/mmtbx/f_model/f_model.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/geometry/ -rw-r--r-- root/root 1507 2025-03-01 14:39 ./usr/include/mmtbx/geometry/asa.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/geometry/boost_python/ -rw-r--r-- root/root 3314 2025-03-01 14:39 ./usr/include/mmtbx/geometry/boost_python/containment.hpp -rw-r--r-- root/root 3812 2025-03-01 14:39 ./usr/include/mmtbx/geometry/boost_python/indexing.hpp -rw-r--r-- root/root 8938 2025-03-01 14:39 ./usr/include/mmtbx/geometry/calculator.hpp -rw-r--r-- root/root 2763 2025-03-01 14:39 ./usr/include/mmtbx/geometry/clash.hpp -rw-r--r-- root/root 3253 2025-03-01 14:39 ./usr/include/mmtbx/geometry/containment.hpp -rw-r--r-- root/root 3678 2025-03-01 14:39 ./usr/include/mmtbx/geometry/flattening.hpp -rw-r--r-- root/root 4731 2025-03-01 14:39 ./usr/include/mmtbx/geometry/indexing.hpp -rw-r--r-- root/root 933 2025-03-01 14:39 ./usr/include/mmtbx/geometry/overlap.hpp -rw-r--r-- root/root 1897 2025-03-01 14:39 ./usr/include/mmtbx/geometry/primitive.hpp -rw-r--r-- root/root 999 2025-03-01 14:39 ./usr/include/mmtbx/geometry/sphere_surface_sampling.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/geometry_restraints/ -rw-r--r-- root/root 13674 2025-03-01 14:39 ./usr/include/mmtbx/geometry_restraints/ramachandran.h -rw-r--r-- root/root 2792 2025-03-01 14:39 ./usr/include/mmtbx/geometry_restraints/reference_coordinate.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/hydrogens/ -rw-r--r-- root/root 12268 2025-03-01 14:39 ./usr/include/mmtbx/hydrogens/hydrogens.h -rw-r--r-- root/root 190 2025-03-01 14:39 ./usr/include/mmtbx/import_scitbx_af.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/masks/ -rw-r--r-- root/root 12676 2025-03-01 14:39 ./usr/include/mmtbx/masks/atom_mask.h -rw-r--r-- root/root 3127 2025-03-01 14:39 ./usr/include/mmtbx/masks/grid_symop.h -rw-r--r-- root/root 250 2025-03-01 14:39 ./usr/include/mmtbx/masks/util.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/ -rw-r--r-- root/root 30357 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/max_lik.h -rw-r--r-- root/root 19343 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_09may2005.h -rw-r--r-- root/root 9857 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_09may2005_short.h -rw-r--r-- root/root 9856 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_09may2005_short_uniform.h -rw-r--r-- root/root 2145 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_14mar2005.h -rw-r--r-- root/root 2161 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_14mar2005_mod.h -rw-r--r-- root/root 773 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/solvent_distribution_nco_14mar2005_short.h -rw-r--r-- root/root 978 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/wat_dist_r_0_1.h -rw-r--r-- root/root 1430 2025-03-01 14:39 ./usr/include/mmtbx/max_lik/wat_dist_r_2p0_2p5.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/ncs/ -rw-r--r-- root/root 9388 2025-03-01 14:39 ./usr/include/mmtbx/ncs/cartesian_restraints.h -rw-r--r-- root/root 13350 2025-03-01 14:39 ./usr/include/mmtbx/ncs/tncs.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/pair_interaction/ -rw-r--r-- root/root 15206 2025-03-01 14:39 ./usr/include/mmtbx/pair_interaction/interaction.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/probe/ -rw-r--r-- root/root 882 2025-03-01 14:39 ./usr/include/mmtbx/probe/Common.h -rw-r--r-- root/root 4957 2025-03-01 14:39 ./usr/include/mmtbx/probe/DotSpheres.h -rw-r--r-- root/root 25534 2025-03-01 14:39 ./usr/include/mmtbx/probe/Scoring.h -rw-r--r-- root/root 7848 2025-03-01 14:39 ./usr/include/mmtbx/probe/SpatialQuery.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/reduce/ -rw-r--r-- root/root 4600 2025-03-01 14:39 ./usr/include/mmtbx/reduce/InteractionGraph.h -rw-r--r-- root/root 16833 2025-03-01 14:39 ./usr/include/mmtbx/reduce/Optimizers.h -rw-r--r-- root/root 5240 2025-03-01 14:39 ./usr/include/mmtbx/reduce/PositionReturn.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/rotamer/ -rw-r--r-- root/root 10098 2025-03-01 14:39 ./usr/include/mmtbx/rotamer/fit.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/rsr/ -rw-r--r-- root/root 13285 2025-03-01 14:39 ./usr/include/mmtbx/rsr/rsr.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/scaling/ -rw-r--r-- root/root 29126 2025-03-01 14:39 ./usr/include/mmtbx/scaling/absolute_scaling.h -rw-r--r-- root/root 25744 2025-03-01 14:39 ./usr/include/mmtbx/scaling/outlier.h -rw-r--r-- root/root 57302 2025-03-01 14:39 ./usr/include/mmtbx/scaling/relative_scaling.h -rw-r--r-- root/root 7587 2025-03-01 14:39 ./usr/include/mmtbx/scaling/scaling.h -rw-r--r-- root/root 45741 2025-03-01 14:39 ./usr/include/mmtbx/scaling/twinning.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/secondary_structure/ -rw-r--r-- root/root 4671 2025-03-01 14:39 ./usr/include/mmtbx/secondary_structure/dssp.hpp -rw-r--r-- root/root 1299 2025-03-01 14:39 ./usr/include/mmtbx/secondary_structure/identify.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/tls/ -rw-r--r-- root/root 7498 2025-03-01 14:39 ./usr/include/mmtbx/tls/decompose.h -rw-r--r-- root/root 6732 2025-03-01 14:39 ./usr/include/mmtbx/tls/optimise_amplitudes.h -rw-r--r-- root/root 43810 2025-03-01 14:39 ./usr/include/mmtbx/tls/tls.h -rw-r--r-- root/root 13447 2025-03-01 14:39 ./usr/include/mmtbx/tls/utils.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/utils/ -rw-r--r-- root/root 17227 2025-03-01 14:39 ./usr/include/mmtbx/utils/utils.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/validation/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/mmtbx/validation/ramachandran/ -rw-r--r-- root/root 1398149 2025-03-01 14:39 ./usr/include/mmtbx/validation/ramachandran/rama8000_tables.h -rw-r--r-- root/root 5427 2025-03-01 14:39 ./usr/include/mmtbx/validation/ramachandran/rama_eval.h -rw-r--r-- root/root 322 2025-03-01 14:39 ./usr/include/noexcept_false.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/omptbx/ -rw-r--r-- root/root 512 2025-03-01 14:39 ./usr/include/omptbx/lock.h -rw-r--r-- root/root 214 2025-03-01 14:39 ./usr/include/omptbx/omp_or_stubs.h -rw-r--r-- root/root 1124 2025-03-01 14:39 ./usr/include/omptbx/stubs.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/rstbx/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/rstbx/apps/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/apps/stills/ -rw-r--r-- root/root 25904 2025-03-01 14:39 ./usr/include/rstbx/apps/stills/simple_integration.h -rw-r--r-- root/root 3597 2025-03-01 14:39 ./usr/include/rstbx/backplane.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/rstbx/bandpass/ -rw-r--r-- root/root 6217 2025-10-24 17:38 ./usr/include/rstbx/bandpass/parameters.h -rw-r--r-- root/root 2295 2025-03-01 14:39 ./usr/include/rstbx/bandpass/subpixel_joint_model.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/bpcx/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/bpcx/detector_model/ -rw-r--r-- root/root 1945 2025-03-01 14:39 ./usr/include/rstbx/bpcx/detector_model/sensor.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/diffraction/ -rw-r--r-- root/root 9212 2025-03-01 14:39 ./usr/include/rstbx/diffraction/ewald_sphere.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/diffraction/fastbragg/ -rw-r--r-- root/root 22023 2025-03-01 14:39 ./usr/include/rstbx/diffraction/fastbragg/fastbragg.h -rw-r--r-- root/root 1224 2025-03-01 14:39 ./usr/include/rstbx/diffraction/partial_spot_position_partial_H.h -rw-r--r-- root/root 3189 2025-03-01 14:39 ./usr/include/rstbx/diffraction/reflection_range.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/dps_core/ -rw-r--r-- root/root 1371 2025-03-01 14:39 ./usr/include/rstbx/dps_core/direction.h -rw-r--r-- root/root 2176 2025-03-01 14:39 ./usr/include/rstbx/dps_core/directional_fft.h -rw-r--r-- root/root 3505 2025-03-01 14:39 ./usr/include/rstbx/dps_core/dps_core.h -rw-r--r-- root/root 244 2025-03-01 14:39 ./usr/include/rstbx/dps_core/spotclass.h -rw-r--r-- root/root 175 2025-03-01 14:39 ./usr/include/rstbx/import_scitbx_af.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/indexing_api/ -rw-r--r-- root/root 2118 2025-03-01 14:39 ./usr/include/rstbx/indexing_api/indexing_api.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/simage/ -rw-r--r-- root/root 6568 2025-03-01 14:39 ./usr/include/rstbx/simage/image_simple.hpp drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/simulation/ -rw-r--r-- root/root 13257 2025-03-01 14:39 ./usr/include/rstbx/simulation/sim_xfel1.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/symmetry/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/rstbx/symmetry/constraints/ -rw-r--r-- root/root 4456 2025-03-01 14:39 ./usr/include/rstbx/symmetry/constraints/a_g_conversion.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/scitbx/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/scitbx/array_family/ drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/ -rw-r--r-- root/root 6459 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/c_grid.h -rw-r--r-- root/root 7718 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/c_grid_padded.h -rw-r--r-- root/root 3411 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/c_grid_padded_periodic.h -rw-r--r-- root/root 2354 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/c_grid_periodic.h -rw-r--r-- root/root 788 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/c_index_1d_calculator.h -rw-r--r-- root/root 4339 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/c_interval_grid.h -rw-r--r-- root/root 1426 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/f_grid.h -rw-r--r-- root/root 11576 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/flex_grid.h -rw-r--r-- root/root 290 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/mat_grid.h -rw-r--r-- root/root 2187 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/packed_matrix.h -rw-r--r-- root/root 2281 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/rectangular_full_packed.h -rw-r--r-- root/root 1006 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/row_and_column.h -rw-r--r-- root/root 673 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/striding.h -rw-r--r-- root/root 1249 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/traits.h -rw-r--r-- root/root 608 2025-03-01 14:39 ./usr/include/scitbx/array_family/accessors/trivial.h -rw-r--r-- root/root 761 2025-03-01 14:39 ./usr/include/scitbx/array_family/array_adaptor.h -rw-r--r-- root/root 1867 2025-03-01 14:39 ./usr/include/scitbx/array_family/block_iterator.h drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/include/scitbx/array_family/boost_python/ -rw-r--r-- root/root 2425 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/byte_str.h -rw-r--r-- root/root 3844 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/c_grid_flex_conversions.h -rw-r--r-- root/root 537 2025-10-24 17:38 ./usr/include/scitbx/array_family/boost_python/flex_fwd.h -rw-r--r-- root/root 2617 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/flex_helpers.h -rw-r--r-- root/root 2307 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/flex_pickle_double_buffered.h -rw-r--r-- root/root 6286 2025-03-01 14:39 ./usr/include/scitbx/array_family/boost_python/flex_pickle_single_buffered.h -rw-r--r-- root/root 36198 2025-03-01 14:39 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14:39 ./usr/include/scitbx/array_family/flex_types.h -rw-r--r-- root/root 1003 2025-03-01 14:39 ./usr/include/scitbx/array_family/initialiser.h -rw-r--r-- root/root 2075 2025-03-01 14:39 ./usr/include/scitbx/array_family/linear_interpolation.h -rw-r--r-- root/root 2612 2025-03-01 14:39 ./usr/include/scitbx/array_family/loops.h -rw-r--r-- root/root 2774 2025-03-01 14:39 ./usr/include/scitbx/array_family/memory.h -rw-r--r-- root/root 3825 2025-03-01 14:39 ./usr/include/scitbx/array_family/misc_functions.h -rw-r--r-- root/root 7239 2025-10-24 17:38 ./usr/include/scitbx/array_family/operator_traits_builtin.h -rw-r--r-- root/root 4057 2025-03-01 14:39 ./usr/include/scitbx/array_family/owning_ref.h -rw-r--r-- root/root 2420 2025-03-01 14:39 ./usr/include/scitbx/array_family/range.h -rw-r--r-- root/root 14978 2025-03-01 14:39 ./usr/include/scitbx/array_family/ref.h -rw-r--r-- root/root 62353 2025-10-24 17:38 ./usr/include/scitbx/array_family/ref_algebra.h -rw-r--r-- root/root 1534 2025-10-24 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drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/spotfinder/dxtbx_toolbox/ -rw-r--r-- root/root 3504 2025-03-01 14:39 ./usr/include/spotfinder/dxtbx_toolbox/distl.h -rw-r--r-- root/root 837 2025-03-01 14:39 ./usr/include/spotfinder/dxtbx_toolbox/libdistl.h drwxr-xr-x root/root 0 2025-03-01 14:39 ./usr/include/tbxx/ -rw-r--r-- root/root 487 2025-03-01 14:39 ./usr/include/tbxx/alignment.h -rw-r--r-- root/root 1760 2025-03-01 14:39 ./usr/include/tbxx/error_utils.hpp -rw-r--r-- root/root 2811 2025-03-01 14:39 ./usr/include/tbxx/libc_backtrace.hpp -rw-r--r-- root/root 2857 2025-03-01 14:39 ./usr/include/tbxx/optional_copy.hpp -rw-r--r-- root/root 1493 2025-03-01 14:39 ./usr/include/tbxx/pretty_type_name.hpp -rw-r--r-- root/root 2124 2025-03-01 14:39 ./usr/include/tbxx/time_accu.hpp drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/ lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libann_adaptor.so -> libann_adaptor.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libasymmetric_map.so -> libasymmetric_map.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libcbf-private.so -> libcbf-private.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libccp4io.so -> libccp4io.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libcctbx.so -> libcctbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so -> libcctbx_sgtbx_asu.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so -> libdxtbxspotfinder.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libiotbx_mtz.so -> libiotbx_mtz.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libiotbx_pdb.so -> libiotbx_pdb.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libiotbx_xplor.so -> libiotbx_xplor.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libmmtbx_masks.so -> libmmtbx_masks.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libmmtbx_tls.so -> libmmtbx_tls.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libomptbx.so -> libomptbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/librstbx.so -> librstbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so -> libscitbx_boost_python.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libscitbx_minpack.so -> libscitbx_minpack.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libscitbx_slatec.so -> libscitbx_slatec.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so -> libsmtbx_refinement_constraints.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libspotfinder.so -> libspotfinder.so.0.0.1 drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/cctbx/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/cctbx/python3.13/ lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/cctbx/python3.13/include -> ../../../include/cctbx drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/doc/libcctbx-dev/ -rw-r--r-- root/root 3740 2025-10-24 17:38 ./usr/share/doc/libcctbx-dev/changelog.Debian.gz -rw-r--r-- root/root 4127 2025-03-01 14:39 ./usr/share/doc/libcctbx-dev/changelog.gz -rw-r--r-- root/root 38654 2024-11-13 10:35 ./usr/share/doc/libcctbx-dev/copyright libcctbx0-dbgsym_2025.2+ds2+~3.23.0+ds1-1_arm64.deb --------------------------------------------------- new Debian package, version 2.0. size 9845000 bytes: control archive=1480 bytes. 1155 bytes, 12 lines control 2101 bytes, 20 lines md5sums Package: libcctbx0-dbgsym Source: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Science Maintainers Installed-Size: 14269 Depends: libcctbx0 (= 2025.2+ds2+~3.23.0+ds1-1) Section: debug Priority: optional Description: debug symbols for libcctbx0 Build-Ids: 0cafea64204b90c9b31e433848a992ef80e887bf 0d4d4a2d3e8d8aadfaf0c85e97a8cdd8b1d6cf18 0da01bc76df178a4c91c90245c484d95ef2dfcc1 118ec818e2a8aef469e456320fff8e209a5c6203 11d2050414411f11f3ac0cec16150e3ca78e3147 14dde896fddfd8d0dc7216b265113be76a47cf3f 160eee3a0a79ac061fdc3a16ead64b169795f1c2 25a475e4ac49f117c5cce9db51f3977d4c13dc46 35b8d88d46ce42e23b0e342eb1b5385ae44be197 4184449d13b44fd3e2a5697e24e6277267794cf1 44c050ca42aedecee4c12dc3e9a3ff17790bae32 6f2e55bdc4eb3f7c4906b53a113ccb49023e8e9d 78e3a204d1b5cfef7a843937eea3328f66ca6cef 976f9af382034d74bd0ee2f7e1de13cc6f67ff6e 9a5e3044aa965861d92ecb6134de5a9b24895f25 cc25063d831d6cfb11fc27d15fdbe86e8184983b eb58622dc1e64d09adabfb5df2c69d5a5139f084 fd9dcac506af1011b4fded922a28cd02d5e62ab9 fdaf7cfeb3a53844ab34ab00b9de58ed723a96da drwxr-xr-x root/root 0 2025-10-24 17:38 ./ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/0c/ -rw-r--r-- root/root 88272 2025-10-24 17:38 ./usr/lib/debug/.build-id/0c/afea64204b90c9b31e433848a992ef80e887bf.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/0d/ -rw-r--r-- root/root 2675608 2025-10-24 17:38 ./usr/lib/debug/.build-id/0d/4d4a2d3e8d8aadfaf0c85e97a8cdd8b1d6cf18.debug -rw-r--r-- root/root 14056 2025-10-24 17:38 ./usr/lib/debug/.build-id/0d/a01bc76df178a4c91c90245c484d95ef2dfcc1.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/11/ -rw-r--r-- root/root 2563360 2025-10-24 17:38 ./usr/lib/debug/.build-id/11/8ec818e2a8aef469e456320fff8e209a5c6203.debug -rw-r--r-- root/root 321752 2025-10-24 17:38 ./usr/lib/debug/.build-id/11/d2050414411f11f3ac0cec16150e3ca78e3147.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/14/ -rw-r--r-- root/root 569744 2025-10-24 17:38 ./usr/lib/debug/.build-id/14/dde896fddfd8d0dc7216b265113be76a47cf3f.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/16/ -rw-r--r-- root/root 789104 2025-10-24 17:38 ./usr/lib/debug/.build-id/16/0eee3a0a79ac061fdc3a16ead64b169795f1c2.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/25/ -rw-r--r-- root/root 130288 2025-10-24 17:38 ./usr/lib/debug/.build-id/25/a475e4ac49f117c5cce9db51f3977d4c13dc46.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/35/ -rw-r--r-- root/root 1297976 2025-10-24 17:38 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./usr/lib/debug/.build-id/97/6f9af382034d74bd0ee2f7e1de13cc6f67ff6e.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/9a/ -rw-r--r-- root/root 174408 2025-10-24 17:38 ./usr/lib/debug/.build-id/9a/5e3044aa965861d92ecb6134de5a9b24895f25.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/cc/ -rw-r--r-- root/root 3425552 2025-10-24 17:38 ./usr/lib/debug/.build-id/cc/25063d831d6cfb11fc27d15fdbe86e8184983b.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/eb/ -rw-r--r-- root/root 8600 2025-10-24 17:38 ./usr/lib/debug/.build-id/eb/58622dc1e64d09adabfb5df2c69d5a5139f084.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.build-id/fd/ -rw-r--r-- root/root 963928 2025-10-24 17:38 ./usr/lib/debug/.build-id/fd/9dcac506af1011b4fded922a28cd02d5e62ab9.debug -rw-r--r-- root/root 11440 2025-10-24 17:38 ./usr/lib/debug/.build-id/fd/af7cfeb3a53844ab34ab00b9de58ed723a96da.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/debug/.dwz/aarch64-linux-gnu/ -rw-r--r-- root/root 367992 2025-10-24 17:38 ./usr/lib/debug/.dwz/aarch64-linux-gnu/libcctbx0.debug drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/doc/ lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/share/doc/libcctbx0-dbgsym -> libcctbx0 libcctbx0_2025.2+ds2+~3.23.0+ds1-1_arm64.deb -------------------------------------------- new Debian package, version 2.0. size 2181452 bytes: control archive=2548 bytes. 3053 bytes, 55 lines control 1825 bytes, 22 lines md5sums 1057 bytes, 19 lines shlibs 66 bytes, 2 lines triggers Package: libcctbx0 Source: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 Architecture: arm64 Maintainer: Debian Science Maintainers Installed-Size: 12029 Depends: libann-cctbx0 (>= 1.1.2+doc), libboost-python1.83.0 (>= 1.83.0), libboost-python1.83.0-py313, libc6 (>= 2.38), libcbf1t64 (>= 0.9.7+dfsg1-2~), libccp4c0t64 (>= 8.0.0), libgcc-s1 (>= 4.0), libstdc++6 (>= 13.1) Section: libs Priority: optional Homepage: https://github.com/cctbx/cctbx_project Description: Computational Crystallography Toolbox - runtime libraries Computational Crystallography Toolbox contains following modules: - annlib_adaptbx: - boost_adaptbx: wrappers for Boost functionality in CCTBX - cbflib_adaptbx: - ccp4io_adaptbx: - cctbx: Libraries for general crystallographic applications, useful for both small-molecule and macro-molecular crystallography. - cma_es: - crys3d: Modules for the display of molecules, electron density, and reciprocal space data. - dxtbx: The Diffraction Image Toolbox, a library for handling X-ray detector data of arbitrary complexity from a variety of standard formats. - fable: Fortran EMulation library for porting Fortran77 to C++. - gltbx: Python bindings for OpenGL - iotbx: Working with common crystallographic file formats. - libtbx: The build system common to all other modules. This includes a very thin wrapper around the SCons software construction tool. It also contains many useful frameworks and utilities to simplify application development, including tools for regression testing, parallelization across multiprocessor systems and managed clusters, and a flexible, modular configuration syntax called PHIL (Python Hierarchial Interface Language) used throughout the CCTBX. - mmtbx: Functionality specific to macromolecular crystallography. This includes all of the machinery required for setup of geometry restraints, bulk solvent correction and scaling, analysis of macromolecular diffraction data, calculation of weighted map coefficients, and most of the methods implemented in phenix.refine. The majority of infrastructure for the MolProbity validation server (and Phenix equivalent) is also located here. - omptbx: OpenMP interface. - rstbx: A reciprocal space toolbox to autoindex small molecule Bragg diffraction, given the reciprocal space vectors. - scitbx: General scientific calculations. his includes a family of high-level C++ array types, a fast Fourier transform library, and a C++ port of the popular L-BFGS quasi-Newton minimizer. - smtbx: Small-Molecule crystallography. - spotfinder: - tbxx: - wxtbx: wxPython controls used in the Phenix GUI and various utilities . This package provide the cctbx runtime libraries. drwxr-xr-x root/root 0 2025-10-24 17:38 ./ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/ lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libann_adaptor.so.0 -> libann_adaptor.so.0.0.1 -rw-r--r-- root/root 69104 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libann_adaptor.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0 -> libasymmetric_map.so.0.0.1 -rw-r--r-- root/root 535408 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libasymmetric_map.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libcbf-private.so.0 -> libcbf-private.so.0.0.1 -rw-r--r-- root/root 134968 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libcbf-private.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libccp4io.so.0 -> libccp4io.so.0.0.1 -rw-r--r-- root/root 67720 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libccp4io.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libcctbx.so.0 -> libcctbx.so.0.0.1 -rw-r--r-- root/root 2898200 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libcctbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0 -> libcctbx_sgtbx_asu.so.0.0.1 -rw-r--r-- root/root 3989584 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0 -> libdxtbxspotfinder.so.0.0.1 -rw-r--r-- root/root 268184 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libdxtbxspotfinder.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0 -> libiotbx_mtz.so.0.0.1 -rw-r--r-- root/root 335224 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libiotbx_mtz.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0 -> libiotbx_pdb.so.0.0.1 -rw-r--r-- root/root 1650344 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libiotbx_pdb.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0 -> libiotbx_xplor.so.0.0.1 -rw-r--r-- root/root 135424 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libiotbx_xplor.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0 -> libmmtbx_masks.so.0.0.1 -rw-r--r-- root/root 402400 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libmmtbx_masks.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0 -> libmmtbx_tls.so.0.0.1 -rw-r--r-- root/root 134896 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libmmtbx_tls.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libomptbx.so.0 -> libomptbx.so.0.0.1 -rw-r--r-- root/root 67848 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libomptbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/librstbx.so.0 -> librstbx.so.0.0.1 -rw-r--r-- root/root 201768 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/librstbx.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0 -> libscitbx_boost_python.so.0.0.1 -rw-r--r-- root/root 68640 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libscitbx_boost_python.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0 -> libscitbx_minpack.so.0.0.1 -rw-r--r-- root/root 68272 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libscitbx_minpack.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0 -> libscitbx_slatec.so.0.0.1 -rw-r--r-- root/root 67776 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libscitbx_slatec.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0 -> libsmtbx_refinement_constraints.so.0.0.1 -rw-r--r-- root/root 663528 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libspotfinder.so.0 -> libspotfinder.so.0.0.1 -rw-r--r-- root/root 469384 2025-10-24 17:38 ./usr/lib/aarch64-linux-gnu/libspotfinder.so.0.0.1 drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/doc/libcctbx0/ -rw-r--r-- root/root 3740 2025-10-24 17:38 ./usr/share/doc/libcctbx0/changelog.Debian.gz -rw-r--r-- root/root 4127 2025-03-01 14:39 ./usr/share/doc/libcctbx0/changelog.gz -rw-r--r-- root/root 38654 2024-11-13 10:35 ./usr/share/doc/libcctbx0/copyright python3-cctbx-dbgsym_2025.2+ds2+~3.23.0+ds1-1_arm64.deb ------------------------------------------------------- new Debian package, version 2.0. size 145379940 bytes: control archive=9244 bytes. 8671 bytes, 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root/root 0 2025-10-24 17:38 ./usr/share/doc/ lrwxrwxrwx root/root 0 2025-10-24 17:38 ./usr/share/doc/python3-cctbx-dbgsym -> python3-cctbx python3-cctbx_2025.2+ds2+~3.23.0+ds1-1_arm64.deb ------------------------------------------------ new Debian package, version 2.0. size 36482320 bytes: control archive=124552 bytes. 3852 bytes, 55 lines control 493668 bytes, 5079 lines md5sums 273 bytes, 12 lines * postinst #!/bin/sh 386 bytes, 12 lines * prerm #!/bin/sh Package: python3-cctbx Source: cctbx Version: 2025.2+ds2+~3.23.0+ds1-1 Architecture: arm64 Maintainer: Debian Science Maintainers Installed-Size: 300758 Depends: ca-certificates, libcctbx-dev (= 2025.2+ds2+~3.23.0+ds1-1), libcctbx0 (= 2025.2+ds2+~3.23.0+ds1-1), python3-legacy-cgi, python3-pycbf (>= 0.9.7+dfsg1-2~), python3 (<< 3.14), python3 (>= 3.13~), python3-h5py (>= 3), python3-hdf5plugin, python3-matplotlib, python3-mrcfile, python3-natsort, python3-numpy, python3-numpy2-abi0 | python3-numpy-abi9, python3-nxmx, python3-ordered-set, python3-pil, python3-pint, python3-procrunner, python3-pymol, python3-requests, python3-scipy, python3-six, python3-tqdm, python3-wxgtk4.0, python3:any, libantlr3c-3.4-0 | libantlr3c-antlrdbg-3.4-0, libboost-numpy1.83.0 (>= 1.83.0), libboost-numpy1.83.0-py313, libboost-python1.83.0 (>= 1.83.0), libboost-python1.83.0-py313, libboost-thread1.83.0 (>= 1.83.0), libboost-timer1.83.0 (>= 1.83.0), libc6 (>= 2.38), libcbf1t64 (>= 0.9.7+dfsg1-2~), libccp4c0t64 (>= 8.0.0), libgcc-s1 (>= 4.5), libgl1, libglu1-mesa | libglu1, libhdf5-310 (>= 1.14.3), libmmdb2-0 (>= 2.0.22), libssm2 (>= 1.4.0), libstdc++6 (>= 14) Section: python Priority: optional Homepage: https://github.com/cctbx/cctbx_project Description: Python Toolbox for crystallography Computational Crystallography Toolbox contains following modules: - annlib_adaptbx: - boost_adaptbx: wrappers for Boost functionality in CCTBX - cbflib_adaptbx: - ccp4io_adaptbx: - cctbx: Libraries for general crystallographic applications, useful for both small-molecule and macro-molecular crystallography. - cma_es: - crys3d: Modules for the display of molecules, electron density, and reciprocal space data. - dxtbx: The Diffraction Image Toolbox, a library for handling X-ray detector data of arbitrary complexity from a variety of standard formats. - fable: Fortran EMulation library for porting Fortran77 to C++. - gltbx: Python bindings for OpenGL - iotbx: Working with common crystallographic file formats. - libtbx: The build system common to all other modules. This includes a very thin wrapper around the SCons software construction tool. It also contains many useful frameworks and utilities to simplify application development, including tools for regression testing, parallelization across multiprocessor systems and managed clusters, and a flexible, modular configuration syntax called PHIL (Python Hierarchial Interface Language) used throughout the CCTBX. - mmtbx: Functionality specific to macromolecular crystallography. This includes all of the machinery required for setup of geometry restraints, bulk solvent correction and scaling, analysis of macromolecular diffraction data, calculation of weighted map coefficients, and most of the methods implemented in phenix.refine. The majority of infrastructure for the MolProbity validation server (and Phenix equivalent) is also located here. - omptbx: OpenMP interface. - rstbx: A reciprocal space toolbox to autoindex small molecule Bragg diffraction, given the reciprocal space vectors. - scitbx: General scientific calculations. his includes a family of high-level C++ array types, a fast Fourier transform library, and a C++ port of the popular L-BFGS quasi-Newton minimizer. - smtbx: Small-Molecule crystallography. - spotfinder: - tbxx: - wxtbx: wxPython controls used in the Phenix GUI and various utilities . 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./usr/bin/fable.read -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/fable.show_build_path -rwxr-xr-x root/root 3787 2025-10-24 17:38 ./usr/bin/fable.show_calls -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/fable.show_dist_paths -rwxr-xr-x root/root 3767 2025-10-24 17:38 ./usr/bin/fable.split -rwxr-xr-x root/root 3267 2025-10-24 17:38 ./usr/bin/gltbx.python -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/gltbx.show_build_path -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/gltbx.show_dist_paths -rwxr-xr-x root/root 3791 2025-10-24 17:38 ./usr/bin/gltbx.try_imports -rwxr-xr-x root/root 3783 2025-10-24 17:38 ./usr/bin/iotbx.blast_pdb -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/iotbx.build_phil_cache -rwxr-xr-x root/root 3779 2025-10-24 17:38 ./usr/bin/iotbx.cbf_read -rwxr-xr-x root/root 3827 2025-10-24 17:38 ./usr/bin/iotbx.cif.as_miller_arrays -rwxr-xr-x root/root 3831 2025-10-24 17:38 ./usr/bin/iotbx.cif.as_xray_structure -rwxr-xr-x root/root 3795 2025-10-24 17:38 ./usr/bin/iotbx.cif.validate -rwxr-xr-x root/root 3787 2025-10-24 17:38 ./usr/bin/iotbx.cif_as_mtz -rwxr-xr-x root/root 3787 2025-10-24 17:38 ./usr/bin/iotbx.cif_as_pdb -rwxr-xr-x root/root 3831 2025-10-24 17:38 ./usr/bin/iotbx.cns.reflection_reader -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/iotbx.cns.sdb_reader -rwxr-xr-x root/root 3863 2025-10-24 17:38 ./usr/bin/iotbx.cns.transfer_crystal_symmetry -rwxr-xr-x root/root 3847 2025-10-24 17:38 ./usr/bin/iotbx.crystal_symmetry_from_any -rwxr-xr-x root/root 3819 2025-10-24 17:38 ./usr/bin/iotbx.dano_as_amplitudes -rwxr-xr-x root/root 3835 2025-10-24 17:38 ./usr/bin/iotbx.distance_least_squares -rwxr-xr-x root/root 3795 2025-10-24 17:38 ./usr/bin/iotbx.dtrek.to_cns -rwxr-xr-x root/root 3763 2025-10-24 17:38 ./usr/bin/iotbx.emma -rwxr-xr-x root/root 3847 2025-10-24 17:38 ./usr/bin/iotbx.export_scalepack_unmerged -rwxr-xr-x root/root 3783 2025-10-24 17:38 ./usr/bin/iotbx.fetch_pdb -rwxr-xr-x root/root 3791 2025-10-24 17:38 ./usr/bin/iotbx.file_reader -rwxr-xr-x root/root 3799 2025-10-24 17:38 ./usr/bin/iotbx.french_wilson -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/iotbx.get_pubmed_citation -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/iotbx.lattice_symmetry -rwxr-xr-x root/root 3819 2025-10-24 17:38 ./usr/bin/iotbx.merging_statistics -rwxr-xr-x root/root 3779 2025-10-24 17:38 ./usr/bin/iotbx.mtz.dump -rwxr-xr-x root/root 3831 2025-10-24 17:38 ./usr/bin/iotbx.pdb.add_conformations -rwxr-xr-x root/root 3831 2025-10-24 17:38 ./usr/bin/iotbx.pdb.as_xray_structure -rwxr-xr-x root/root 3839 2025-10-24 17:38 ./usr/bin/iotbx.pdb.box_around_molecule -rwxr-xr-x root/root 3855 2025-10-24 17:38 ./usr/bin/iotbx.pdb.flip_symmetric_amino_acids -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/iotbx.pdb.get_citation -rwxr-xr-x root/root 3843 2025-10-24 17:38 ./usr/bin/iotbx.pdb.insert_scale_records -rwxr-xr-x root/root 3839 2025-10-24 17:38 ./usr/bin/iotbx.pdb.join_fragment_files -rwxr-xr-x root/root 3895 2025-10-24 17:38 ./usr/bin/iotbx.pdb.link_as_geometry_restraints_edits -rwxr-xr-x root/root 3819 2025-10-24 17:38 ./usr/bin/iotbx.pdb.print_sequence -rwxr-xr-x root/root 3831 2025-10-24 17:38 ./usr/bin/iotbx.pdb.show_connectivity -rwxr-xr-x root/root 3791 2025-10-24 17:38 ./usr/bin/iotbx.pdb.sort_atoms -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/iotbx.pdb.split_models -rwxr-xr-x root/root 3855 2025-10-24 17:38 ./usr/bin/iotbx.pdb.superpose_atoms_by_name -rwxr-xr-x root/root 3863 2025-10-24 17:38 ./usr/bin/iotbx.pdb.superpose_centers_of_mass -rwxr-xr-x root/root 3795 2025-10-24 17:38 ./usr/bin/iotbx.pdb_as_fasta -rwxr-xr-x root/root 3831 2025-10-24 17:38 ./usr/bin/iotbx.pdb_labels_comparison -rwxr-xr-x root/root 3807 2025-10-24 17:38 ./usr/bin/iotbx.pdb_labels_diff -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/iotbx.pdb_remediator -rwxr-xr-x root/root 3763 2025-10-24 17:38 ./usr/bin/iotbx.phil -rwxr-xr-x root/root 3843 2025-10-24 17:38 ./usr/bin/iotbx.poscar_as_xray_structure -rwxr-xr-x root/root 3267 2025-10-24 17:38 ./usr/bin/iotbx.python -rwxr-xr-x root/root 3847 2025-10-24 17:38 ./usr/bin/iotbx.r_free_flags_accumulation -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/iotbx.r_free_flags_as_cns -rwxr-xr-x root/root 3867 2025-10-24 17:38 ./usr/bin/iotbx.r_free_flags_completion_simple -rwxr-xr-x root/root 3847 2025-10-24 17:38 ./usr/bin/iotbx.reflection_file_converter -rwxr-xr-x root/root 3835 2025-10-24 17:38 ./usr/bin/iotbx.reflection_file_editor -rwxr-xr-x root/root 3835 2025-10-24 17:38 ./usr/bin/iotbx.reflection_file_reader -rwxr-xr-x root/root 3795 2025-10-24 17:38 ./usr/bin/iotbx.shelx.as_cif -rwxr-xr-x root/root 3839 2025-10-24 17:38 ./usr/bin/iotbx.shelx.as_xray_structure -rwxr-xr-x root/root 3827 2025-10-24 17:38 ./usr/bin/iotbx.shelx.dump_as_python -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/iotbx.show_build_path -rwxr-xr-x root/root 3810 2025-10-24 17:38 ./usr/bin/iotbx.show_dist_paths -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/iotbx.show_distances -rwxr-xr-x root/root 3839 2025-10-24 17:38 ./usr/bin/iotbx.simple_map_coefficients -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/iotbx.split_data_cif -rwxr-xr-x root/root 3807 2025-10-24 17:38 ./usr/bin/iotbx.symmetry_search -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/iotbx.unique_with_biomt -rwxr-xr-x root/root 3835 2025-10-24 17:38 ./usr/bin/iotbx.xplor.map.show_summary -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/labelit.png -rwxr-xr-x root/root 3875 2025-10-24 17:38 ./usr/bin/libtbx.add_from_future_import_division -rwxr-xr-x root/root 3835 2025-10-24 17:38 ./usr/bin/libtbx.analyse_code_comments -rwxr-xr-x root/root 3783 2025-10-24 17:38 ./usr/bin/libtbx.any2unix -rwxr-xr-x root/root 3819 2025-10-24 17:38 ./usr/bin/libtbx.assert_line_count -rwxr-xr-x root/root 3831 2025-10-24 17:38 ./usr/bin/libtbx.assert_not_show_diff -rwxr-xr-x root/root 3799 2025-10-24 17:38 ./usr/bin/libtbx.assert_stdin -rwxr-xr-x root/root 3867 2025-10-24 17:38 ./usr/bin/libtbx.assert_stdin_contains_strings -rwxr-xr-x root/root 3875 2025-10-24 17:38 ./usr/bin/libtbx.assert_stdin_does_not_contain_strings -rwxr-xr-x root/root 3839 2025-10-24 17:38 ./usr/bin/libtbx.assert_stdin_ends_with -rwxr-xr-x root/root 3719 2025-10-24 17:38 ./usr/bin/libtbx.bash -rwxr-xr-x root/root 3727 2025-10-24 17:38 ./usr/bin/libtbx.bibtex -rwxr-xr-x root/root 3787 2025-10-24 17:38 ./usr/bin/libtbx.bootstrap -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/libtbx.bundle_as_exe -rwxr-xr-x root/root 3766 2025-10-24 17:38 ./usr/bin/libtbx.bundle_as_selfx -rwxr-xr-x root/root 3799 2025-10-24 17:38 ./usr/bin/libtbx.check_libcpp -rwxr-xr-x root/root 3771 2025-10-24 17:38 ./usr/bin/libtbx.chunk -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/libtbx.clean_clutter -rwxr-xr-x root/root 3795 2025-10-24 17:38 ./usr/bin/libtbx.clear_paths -rwxr-xr-x root/root 3739 2025-10-24 17:38 ./usr/bin/libtbx.configure -rwxr-xr-x root/root 3883 2025-10-24 17:38 ./usr/bin/libtbx.create_cctbx_bundle_for_installer -rwxr-xr-x root/root 3851 2025-10-24 17:38 ./usr/bin/libtbx.create_install_script_bat -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/libtbx.create_installer -rwxr-xr-x root/root 3807 2025-10-24 17:38 ./usr/bin/libtbx.create_mac_app -rwxr-xr-x root/root 3799 2025-10-24 17:38 ./usr/bin/libtbx.create_selfx -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/libtbx.create_unzipsfx -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/libtbx.create_windows_exe -rwxr-xr-x root/root 3715 2025-10-24 17:38 ./usr/bin/libtbx.csh -rwxr-xr-x root/root 3775 2025-10-24 17:38 ./usr/bin/libtbx.dtrace -rwxr-xr-x root/root 3787 2025-10-24 17:38 ./usr/bin/libtbx.easy_qsub -rwxr-xr-x root/root 3779 2025-10-24 17:38 ./usr/bin/libtbx.env_run -rwxr-xr-x root/root 3791 2025-10-24 17:38 ./usr/bin/libtbx.epydoc_run -rwxr-xr-x root/root 3719 2025-10-24 17:38 ./usr/bin/libtbx.exec -rwxr-xr-x root/root 3835 2025-10-24 17:38 ./usr/bin/libtbx.extract_code_from_txt -rwxr-xr-x root/root 3799 2025-10-24 17:38 ./usr/bin/libtbx.find_clutter -rwxr-xr-x root/root 3791 2025-10-24 17:38 ./usr/bin/libtbx.find_files -rwxr-xr-x root/root 3831 2025-10-24 17:38 ./usr/bin/libtbx.find_in_repositories -rwxr-xr-x root/root 3839 2025-10-24 17:38 ./usr/bin/libtbx.find_old_style_classes -rwxr-xr-x root/root 3843 2025-10-24 17:38 ./usr/bin/libtbx.find_pdb_mmcif_problems -rwxr-xr-x root/root 3827 2025-10-24 17:38 ./usr/bin/libtbx.find_reserved_names -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/libtbx.find_under_build -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/libtbx.find_untested -rwxr-xr-x root/root 3827 2025-10-24 17:38 ./usr/bin/libtbx.find_unused_imports -rwxr-xr-x root/root 3851 2025-10-24 17:38 ./usr/bin/libtbx.find_unused_imports_crude -rwxr-xr-x root/root 3715 2025-10-24 17:38 ./usr/bin/libtbx.gdb -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/libtbx.git_avoid_merges -rwxr-xr-x root/root 3767 2025-10-24 17:38 ./usr/bin/libtbx.help -rwxr-xr-x root/root 3807 2025-10-24 17:38 ./usr/bin/libtbx.import_all_ext -rwxr-xr-x root/root 3819 2025-10-24 17:38 ./usr/bin/libtbx.import_all_python -rwxr-xr-x root/root 3779 2025-10-24 17:38 ./usr/bin/libtbx.install -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/libtbx.install_conda -rwxr-xr-x root/root 3723 2025-10-24 17:38 ./usr/bin/libtbx.latex -rwxr-xr-x root/root 3791 2025-10-24 17:38 ./usr/bin/libtbx.line_count -rwxr-xr-x root/root 3791 2025-10-24 17:38 ./usr/bin/libtbx.list_files -rwxr-xr-x root/root 3799 2025-10-24 17:38 ./usr/bin/libtbx.list_modules -rwxr-xr-x root/root 3879 2025-10-24 17:38 ./usr/bin/libtbx.list_source_files_sorted_by_size -rwxr-xr-x root/root 3787 2025-10-24 17:38 ./usr/bin/libtbx.make_dist -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/libtbx.make_sphinx_html -rwxr-xr-x root/root 3775 2025-10-24 17:38 ./usr/bin/libtbx.nequal -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/libtbx.parallel_simple -rwxr-xr-x root/root 3799 2025-10-24 17:38 ./usr/bin/libtbx.path_utility -rwxr-xr-x root/root 3735 2025-10-24 17:38 ./usr/bin/libtbx.pdflatex -rwxr-xr-x root/root 3767 2025-10-24 17:38 ./usr/bin/libtbx.phil -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/libtbx.prime_factors_of -rwxr-xr-x root/root 3783 2025-10-24 17:38 ./usr/bin/libtbx.printenv -rwxr-xr-x root/root 3807 2025-10-24 17:38 ./usr/bin/libtbx.py_compile_all -rwxr-xr-x root/root 3268 2025-10-24 17:38 ./usr/bin/libtbx.python -rwxr-xr-x root/root 3859 2025-10-24 17:38 ./usr/bin/libtbx.raise_exception_for_testing -rwxr-xr-x root/root 3731 2025-10-24 17:38 ./usr/bin/libtbx.refresh -rwxr-xr-x root/root 3819 2025-10-24 17:38 ./usr/bin/libtbx.remote_processing -rwxr-xr-x root/root 3795 2025-10-24 17:38 ./usr/bin/libtbx.remove_tree -rwxr-xr-x root/root 3835 2025-10-24 17:38 ./usr/bin/libtbx.remove_unused_imports -rwxr-xr-x root/root 3835 2025-10-24 17:38 ./usr/bin/libtbx.resource_monitor_plot -rwxr-xr-x root/root 3831 2025-10-24 17:38 ./usr/bin/libtbx.run_pickled_function -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/libtbx.run_tests_parallel -rwxr-xr-x root/root 3771 2025-10-24 17:38 ./usr/bin/libtbx.scons -rwxr-xr-x root/root 3843 2025-10-24 17:38 ./usr/bin/libtbx.seconds_since_the_epoch -rwxr-xr-x root/root 3827 2025-10-24 17:38 ./usr/bin/libtbx.sge_available_slots -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/libtbx.sge_qstat_counts -rwxr-xr-x root/root 3711 2025-10-24 17:38 ./usr/bin/libtbx.sh -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/libtbx.show_all_on_path -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/libtbx.show_bin_path -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/libtbx.show_build_options -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/libtbx.show_build_path -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/libtbx.show_but_no_repr -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/libtbx.show_commands -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/libtbx.show_date_and_time -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/libtbx.show_dist_paths -rwxr-xr-x root/root 3783 2025-10-24 17:38 ./usr/bin/libtbx.show_env -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/libtbx.show_environ_usage -rwxr-xr-x root/root 3839 2025-10-24 17:38 ./usr/bin/libtbx.show_full_command_path -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/libtbx.show_host_and_user -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/libtbx.show_include_paths -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/libtbx.show_lib_path -rwxr-xr-x root/root 3847 2025-10-24 17:38 ./usr/bin/libtbx.show_module_dependencies -rwxr-xr-x root/root 3851 2025-10-24 17:38 ./usr/bin/libtbx.show_number_of_processors -rwxr-xr-x root/root 3831 2025-10-24 17:38 ./usr/bin/libtbx.show_numeric_version -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/libtbx.show_numpy_version -rwxr-xr-x root/root 3847 2025-10-24 17:38 ./usr/bin/libtbx.show_python_dependencies -rwxr-xr-x root/root 3855 2025-10-24 17:38 ./usr/bin/libtbx.show_python_sys_executable -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/libtbx.show_pythonpath -rwxr-xr-x root/root 3835 2025-10-24 17:38 ./usr/bin/libtbx.show_repository_paths -rwxr-xr-x root/root 3791 2025-10-24 17:38 ./usr/bin/libtbx.show_tests -rwxr-xr-x root/root 3827 2025-10-24 17:38 ./usr/bin/libtbx.show_variable_names -rwxr-xr-x root/root 3827 2025-10-24 17:38 ./usr/bin/libtbx.start_binary_bundle -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/libtbx.start_process -rwxr-xr-x root/root 3719 2025-10-24 17:38 ./usr/bin/libtbx.tcsh -rwxr-xr-x root/root 3774 2025-10-24 17:38 ./usr/bin/libtbx.unpack_in_sources -rwxr-xr-x root/root 3735 2025-10-24 17:38 ./usr/bin/libtbx.valgrind -rwxr-xr-x root/root 3803 2025-10-24 17:38 ./usr/bin/libtbx.wait_for_file -rwxr-xr-x root/root 3811 2025-10-24 17:38 ./usr/bin/mmtbx.altloc_remediate -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/mmtbx.apply_ncs_to_ligand -rwxr-xr-x root/root 3815 2025-10-24 17:38 ./usr/bin/mmtbx.arginine_geometry -rwxr-xr-x root/root 3844 2025-10-24 17:38 ./usr/bin/mmtbx.bfactor_plot -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/mmtbx.clashscore2 -rwxr-xr-x root/root 3827 2025-10-24 17:38 ./usr/bin/mmtbx.density_modification -rwxr-xr-x root/root 3807 2025-10-24 17:38 ./usr/bin/mmtbx.development.aev -rwxr-xr-x root/root 3795 2025-10-24 17:38 ./usr/bin/mmtbx.development.electrons -rwxr-xr-x root/root 3871 2025-10-24 17:38 ./usr/bin/mmtbx.development.ligand_restraints_validation -rwxr-xr-x root/root 3783 2025-10-24 17:38 ./usr/bin/mmtbx.development.qscore -rwxr-xr-x root/root 3823 2025-10-24 17:38 ./usr/bin/mmtbx.development.validate_ligands -rwxr-xr-x root/root 3819 2025-10-24 17:38 ./usr/bin/mmtbx.development.water_b_factors -rwxr-xr-x root/root 3890 2025-10-24 17:38 ./usr/bin/mmtbx.distance_difference -rwxr-xr-x root/root 3803 2025-10-24 17:38 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./usr/share/doc/python3-cctbx/ -rw-r--r-- root/root 3740 2025-10-24 17:38 ./usr/share/doc/python3-cctbx/changelog.Debian.gz -rw-r--r-- root/root 4127 2025-03-01 14:39 ./usr/share/doc/python3-cctbx/changelog.gz -rw-r--r-- root/root 38654 2024-11-13 10:35 ./usr/share/doc/python3-cctbx/copyright drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/lintian/ drwxr-xr-x root/root 0 2025-10-24 17:38 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 1 2024-11-13 10:35 ./usr/share/lintian/overrides/python3-cctbx +------------------------------------------------------------------------------+ | Post Build Sat, 29 Nov 2025 21:20:21 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Sat, 29 Nov 2025 21:20:21 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sat, 29 Nov 2025 21:20:30 +0000 | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Type: any Build-Space: 6545540 Build-Time: 1566 Distribution: unstable Host Architecture: arm64 Install-Time: 4 Job: /srv/rebuilderd/tmp/rebuilderdc08kOc/inputs/cctbx_2025.2+ds2+~3.23.0+ds1-1.dsc Machine Architecture: arm64 Package: cctbx Package-Time: 1589 Source-Version: 2025.2+ds2+~3.23.0+ds1-1 Space: 6545540 Status: successful Version: 2025.2+ds2+~3.23.0+ds1-1 -------------------------------------------------------------------------------- Finished at 2025-11-29T21:20:08Z Build needed 00:26:29, 6545540k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdc08kOc/out checking libcctbx-dev_2025.2+ds2+~3.23.0+ds1-1_arm64.deb: size... sha256... md5... sha1... all OK checking libcctbx0-dbgsym_2025.2+ds2+~3.23.0+ds1-1_arm64.deb: size... sha256... sha1... md5... all OK checking libcctbx0_2025.2+ds2+~3.23.0+ds1-1_arm64.deb: size... sha256... md5... sha1... all OK checking python3-cctbx-dbgsym_2025.2+ds2+~3.23.0+ds1-1_arm64.deb: size... sha1... md5... sha256... all OK checking python3-cctbx_2025.2+ds2+~3.23.0+ds1-1_arm64.deb: size differs for python3-cctbx_2025.2+ds2+~3.23.0+ds1-1_arm64.deb