=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdJFhIUF/inputs/consensuscore_1.1.1+dfsg-8+b1_arm64.buildinfo Source: consensuscore Version: 1.1.1+dfsg-8 rebuilderd-worker node: codethink02-arm64 +------------------------------------------------------------------------------+ | Downloading sources Sat, 06 Dec 2025 00:38:59 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [57.5 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [137 kB] Get:7 https://deb.debian.org/debian sid InRelease [176 kB] Get:8 https://deb.debian.org/debian experimental InRelease [82.8 kB] Get:9 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:10 https://deb.debian.org/debian trixie/non-free-firmware Sources [6548 B] Get:11 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:12 https://deb.debian.org/debian-security trixie-security/main Sources [112 kB] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/main Sources [39.6 kB] Get:15 https://deb.debian.org/debian trixie-backports/main Sources [106 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [2184 B] Get:17 https://deb.debian.org/debian forky/non-free-firmware Sources [7692 B] Get:18 https://deb.debian.org/debian forky/main Sources [10.7 MB] Get:19 https://deb.debian.org/debian sid/main Sources [11.2 MB] Get:20 https://deb.debian.org/debian sid/non-free-firmware Sources [9684 B] Get:21 https://deb.debian.org/debian experimental/non-free-firmware Sources [3052 B] Get:22 https://deb.debian.org/debian experimental/main Sources [352 kB] Fetched 33.8 MB in 31s (1093 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-8.dsc' consensuscore_1.1.1+dfsg-8.dsc 2372 SHA256:13666ceb9ac2d2c87085524d6bdf660d2304695fcd39fa7387563ea38d8504c4 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg.orig.tar.xz' consensuscore_1.1.1+dfsg.orig.tar.xz 363936 SHA256:47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 'https://deb.debian.org/debian/pool/main/c/consensuscore/consensuscore_1.1.1%2bdfsg-8.debian.tar.xz' consensuscore_1.1.1+dfsg-8.debian.tar.xz 10280 SHA256:c6bca19d3f472d6c97567c42c6c677b2183a2d8086fd369e80cf46e9d781ef83 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 consensuscore_1.1.1+dfsg.orig.tar.xz c6bca19d3f472d6c97567c42c6c677b2183a2d8086fd369e80cf46e9d781ef83 consensuscore_1.1.1+dfsg-8.debian.tar.xz 13666ceb9ac2d2c87085524d6bdf660d2304695fcd39fa7387563ea38d8504c4 consensuscore_1.1.1+dfsg-8.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Sat, 06 Dec 2025 00:39:30 +0000 | +------------------------------------------------------------------------------+ Rebuilding consensuscore=1.1.1+dfsg-8 in /srv/rebuilderd/tmp/rebuilderdJFhIUF/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdJFhIUF/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdJFhIUF/inputs/consensuscore_1.1.1+dfsg-8+b1_arm64.buildinfo /srv/rebuilderd/tmp/rebuilderdJFhIUF/inputs/consensuscore_1.1.1+dfsg-8+b1_arm64.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/consensuscore-1.1.1+dfsg I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [176 kB] Get:2 http://snapshot.debian.org/archive/debian/20251202T205305Z forky InRelease [137 kB] Get:3 http://deb.debian.org/debian unstable/main arm64 Packages [10.2 MB] Get:4 http://snapshot.debian.org/archive/debian/20251202T205305Z forky/main arm64 Packages [9627 kB] Fetched 20.1 MB in 4s (5411 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20251202T205305Z/dists/forky/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://deb.debian.org/debian unstable/main arm64 sysvinit-utils arm64 3.15-6 [34.9 kB] Fetched 34.9 kB in 0s (3299 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4k90gkmt/sysvinit-utils_3.15-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (975 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqjjdu4h0/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-15-aarch64-linux-gnu arm64 15.2.0-10 [10.1 MB] Fetched 10.1 MB in 0s (113 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl8w46tfn/cpp-15-aarch64-linux-gnu_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ncurses-base all 6.5+20251123-1 [277 kB] Fetched 277 kB in 0s (12.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5tl54ms4/ncurses-base_6.5+20251123-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13 arm64 3.13.9-1 [2055 kB] Fetched 2055 kB in 0s (69.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0pt0ec01/libpython3.13_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblsan0 arm64 15.2.0-10 [1194 kB] Fetched 1194 kB in 0s (52.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp978i8vsr/liblsan0_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libudev1 arm64 259~rc2-1 [147 kB] Fetched 147 kB in 0s (6307 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4x5k1b42/libudev1_259~rc2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 patch arm64 2.8-2 [128 kB] Fetched 128 kB in 0s (6820 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvwj0eo2d/patch_2.8-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tzdata all 2025b-5 [260 kB] Fetched 260 kB in 0s (13.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcmt59ncl/tzdata_2025b-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 perl-modules-5.40 all 5.40.1-7 [3012 kB] Fetched 3012 kB in 0s (81.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx4giprfn/perl-modules-5.40_5.40.1-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3 arm64 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpztdqsb6v/python3_3.13.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.14-minimal arm64 3.14.0-5 [890 kB] Fetched 890 kB in 0s (41.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbqpgf392/libpython3.14-minimal_3.14.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 grep arm64 3.12-1 [440 kB] Fetched 440 kB in 0s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsi51gp1v/grep_3.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B] Fetched 3828 B in 0s (182 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuwo6mz3o/libboost-dev_1.83.0.2+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc arm64 4:15.2.0-4 [5156 B] Fetched 5156 B in 0s (311 kB/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmp4lfocmt1/gcc_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcrypt1 arm64 1:4.5.1-1 [93.9 kB] Fetched 93.9 kB in 0s (5040 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmp8twhboop/libcrypt1_4.5.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-exec arm64 0.30+b1 [25.8 kB] Fetched 25.8 kB in 0s (1376 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmrn9gczj/dh-exec_0.30+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblapack3 arm64 3.12.1-7 [1846 kB] Fetched 1846 kB in 0s (60.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp480ff9eb/liblapack3_3.12.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.14 arm64 3.14.0-5 [2165 kB] Fetched 2165 kB in 0s (73.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwk5nvtyo/libpython3.14_3.14.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dash arm64 0.5.12-12 [95.6 kB] Fetched 95.6 kB in 0s (5153 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7fpk8qnx/dash_0.5.12-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libhwasan0 arm64 15.2.0-10 [1480 kB] Fetched 1480 kB in 0s (50.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxt4sf8xd/libhwasan0_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjansson4 arm64 2.14-2+b3 [39.2 kB] Fetched 39.2 kB in 0s (3243 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeh68b9br/libjansson4_2.14-2+b3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Fetched 12.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppdk8_xks/python3-jaraco.functools_4.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Fetched 103 kB in 0s (5298 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpsef977j7/libmagic1t64_5.46-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libitm1 arm64 15.2.0-10 [24.1 kB] Fetched 24.1 kB in 0s (1176 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw763sp0o/libitm1_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-aarch64-linux-gnu arm64 4:15.2.0-4 [5288 B] Fetched 5288 B in 0s (290 kB/s) dpkg-name: info: moved 'cpp-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmp2i1lr3mu/cpp-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libctf0 arm64 2.45.50.20251201-1 [85.6 kB] Fetched 85.6 kB in 0s (4855 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdyvrgm17/libctf0_2.45.50.20251201-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Fetched 21.5 kB in 0s (1322 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpok3v3y9r/libffi8_3.5.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-stdlib arm64 3.13.9-2 [10.5 kB] Fetched 10.5 kB in 0s (889 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7hf5zmxj/libpython3-stdlib_3.13.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpc3 arm64 1.3.1-2 [50.2 kB] Fetched 50.2 kB in 0s (2706 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4osvzjsp/libmpc3_1.3.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13-minimal arm64 3.13.9-1 [2061 kB] Fetched 2061 kB in 0s (71.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe283er_h/python3.13-minimal_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 diffutils arm64 1:3.12-1 [397 kB] Fetched 397 kB in 0s (20.0 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpa4kc2ggh/diffutils_3.12-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libatomic1 arm64 15.2.0-10 [9840 B] Fetched 9840 B in 0s (488 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbb5avpmd/libatomic1_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15-base arm64 15.2.0-10 [53.8 kB] Fetched 53.8 kB in 0s (2148 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9zmndgon/gcc-15-base_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcap-ng0 arm64 0.8.5-4+b2 [17.0 kB] Fetched 17.0 kB in 0s (504 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo7jl4btp/libcap-ng0_0.8.5-4+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libzstd1 arm64 1.5.7+dfsg-2 [260 kB] Fetched 260 kB in 0s (2872 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv3zyrste/libzstd1_1.5.7+dfsg-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 mawk arm64 1.3.4.20250131-1 [134 kB] Fetched 134 kB in 0s (7021 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps09yf1xc/mawk_1.3.4.20250131-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 groff-base arm64 1.23.0-10 [1130 kB] Fetched 1130 kB in 0s (40.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppgxmwvxw/groff-base_1.23.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 m4 arm64 1.4.20-2 [315 kB] Fetched 315 kB in 0s (19.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxj3d5kpm/m4_1.4.20-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsimde-dev all 0.8.2-3 [467 kB] Fetched 467 kB in 0s (19.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2h2oumpv/libsimde-dev_0.8.2-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdebhelper-perl all 13.28 [92.4 kB] Fetched 92.4 kB in 0s (4955 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp45ihufcv/libdebhelper-perl_13.28_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gettext arm64 0.23.2-1 [1613 kB] Fetched 1613 kB in 0s (51.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm0vfw9z3/gettext_0.23.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgcc-15-dev arm64 15.2.0-10 [2371 kB] Fetched 2371 kB in 0s (73.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmntss6e6/libgcc-15-dev_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgomp1 arm64 15.2.0-10 [126 kB] Fetched 126 kB in 0s (6286 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9blpm16x/libgomp1_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (450 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm6u52eub/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcrypt-dev arm64 1:4.5.1-1 [126 kB] Fetched 126 kB in 0s (6675 kB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.5.1-1_arm64.deb' to '/srv/rebuilderd/tmp/tmpjiy3xkql/libcrypt-dev_4.5.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 openssl-provider-legacy arm64 3.5.4-1 [306 kB] Fetched 306 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplqnm5l9a/openssl-provider-legacy_3.5.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbz2-1.0 arm64 1.0.8-6 [37.8 kB] Fetched 37.8 kB in 0s (2016 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptt84pad1/libbz2-1.0_1.0.8-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libexpat1-dev arm64 2.7.3-1 [150 kB] Fetched 150 kB in 0s (7656 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvo0d1sc1/libexpat1-dev_2.7.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 make arm64 4.4.1-3 [453 kB] Fetched 453 kB in 0s (20.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeyshmkal/make_4.4.1-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13 arm64 3.13.9-1 [764 kB] Fetched 764 kB in 0s (25.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyhpet_sb/python3.13_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (5577 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1s815dd7/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 tar arm64 1.35+dfsg-3.1 [802 kB] Fetched 802 kB in 0s (32.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpigms683z/tar_1.35+dfsg-3.1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debianutils arm64 5.23.2 [92.4 kB] Fetched 92.4 kB in 0s (4408 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpymf5nhcq/debianutils_5.23.2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (602 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9kcjldha/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcc1-0 arm64 15.2.0-10 [41.4 kB] Fetched 41.4 kB in 0s (2048 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_3a5lzez/libcc1-0_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 findutils arm64 4.10.0-3 [696 kB] Fetched 696 kB in 0s (32.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyg0bgwm4/findutils_4.10.0-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.14-dev arm64 3.14.0-5 [5058 kB] Fetched 5058 kB in 0s (82.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqo5b5a_l/libpython3.14-dev_3.14.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libssl3t64 arm64 3.5.4-1 [2725 kB] Fetched 2725 kB in 0s (109 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpidmx3p6a/libssl3t64_3.5.4-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-dev arm64 3.13.9-2 [26.0 kB] Fetched 26.0 kB in 0s (1641 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3yi6bwee/python3-dev_3.13.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsframe2 arm64 2.45.50.20251201-1 [79.6 kB] Fetched 79.6 kB in 0s (2895 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5_89fgbc/libsframe2_2.45.50.20251201-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-15 arm64 15.2.0-10 [24.8 kB] Fetched 24.8 kB in 0s (417 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnn45uxpu/g++-15_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libubsan1 arm64 15.2.0-10 [1064 kB] Fetched 1064 kB in 0s (37.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpum1o9hdg/libubsan1_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libjs-sphinxdoc all 8.2.3-10 [27.7 kB] Fetched 27.7 kB in 0s (1214 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwfotvcze/libjs-sphinxdoc_8.2.3-10_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bsdextrautils arm64 2.41.2-4 [97.3 kB] Fetched 97.3 kB in 0s (4685 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnib22634/bsdextrautils_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gzip arm64 1.13-1 [135 kB] Fetched 135 kB in 0s (7106 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd83w63vg/gzip_1.13-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm-compat4t64 arm64 1.26-1 [52.8 kB] Fetched 52.8 kB in 0s (2726 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprz3iyx6n/libgdbm-compat4t64_1.26-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 man-db arm64 2.13.1-1 [1453 kB] Fetched 1453 kB in 0s (43.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp46lfjtx7/man-db_2.13.1-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Fetched 224 kB in 0s (22.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpls_4n050/python3-pkg-resources_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 automake all 1:1.18.1-3 [878 kB] Fetched 878 kB in 0s (40.8 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-3_all.deb' to '/srv/rebuilderd/tmp/tmpwra1kxbf/automake_1.18.1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-minimal arm64 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (1665 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmgqnft_3/python3-minimal_3.13.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gettext-base arm64 0.23.2-1 [242 kB] Fetched 242 kB in 0s (13.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmd21sp2l/gettext-base_0.23.2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-dev arm64 3.13.9-2 [10.7 kB] Fetched 10.7 kB in 0s (545 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw84bf1dh/libpython3-dev_3.13.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgcc-s1 arm64 15.2.0-10 [53.4 kB] Fetched 53.4 kB in 0s (1731 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpckrz64es/libgcc-s1_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Fetched 338 kB in 0s (4811 kB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpdnraoa81/libmagic-mgc_5.46-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sed arm64 4.9-2+b1 [326 kB] Fetched 326 kB in 0s (16.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_vn11gpd/sed_4.9-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debhelper all 13.28 [941 kB] Fetched 941 kB in 0s (43.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpagfa_kw5/debhelper_13.28_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-more-itertools all 10.8.0-1 [71.7 kB] Fetched 71.7 kB in 0s (3438 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmp61d3k4/python3-more-itertools_10.8.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules arm64 1.7.0-5 [172 kB] Fetched 172 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfxzfo4bo/libpam-modules_1.7.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Fetched 248 kB in 0s (12.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnfww6xny/po-debconf_1.0.21+nmu1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autopoint all 0.23.2-1 [772 kB] Fetched 772 kB in 0s (35.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3pmgrv_i/autopoint_0.23.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdebconfclient0 arm64 0.282 [11.0 kB] Fetched 11.0 kB in 0s (601 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd0j7wde5/libdebconfclient0_0.282_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsystemd0 arm64 259~rc2-1 [429 kB] Fetched 429 kB in 0s (22.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsbw0xi7s/libsystemd0_259~rc2-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg-dev all 1.22.21 [1338 kB] Fetched 1338 kB in 0s (46.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgtkpkkl2/dpkg-dev_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++ arm64 4:15.2.0-4 [1332 B] Fetched 1332 B in 0s (66.7 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpvv20eh5z/g++_15.2.0-4_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251202T205305Z forky/main arm64 libc6 arm64 2.41-12 [2489 kB] Fetched 2489 kB in 0s (73.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplst52g_9/libc6_2.41-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-aarch64-linux-gnu arm64 4:15.2.0-4 [1432 B] Fetched 1432 B in 0s (74.7 kB/s) dpkg-name: info: moved 'gcc-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpn0q59knl/gcc-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libblkid1 arm64 2.41.2-4 [167 kB] Fetched 167 kB in 0s (7301 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0r3m3s9i/libblkid1_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-all arm64 3.13.9-2 [1052 B] Fetched 1052 B in 0s (51.7 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzxu__d7k/python3-all_3.13.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libncursesw6 arm64 6.5+20251123-1 [125 kB] Fetched 125 kB in 0s (6740 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv_9qarbd/libncursesw6_6.5+20251123-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 linux-libc-dev all 6.17.10-1 [2560 kB] Fetched 2560 kB in 0s (71.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp7hzqezs/linux-libc-dev_6.17.10-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15 arm64 15.2.0-10 [518 kB] Fetched 518 kB in 0s (25.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfh0uk6qo/gcc-15_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtsan2 arm64 15.2.0-10 [2400 kB] Fetched 2400 kB in 0s (60.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr0w52pg6/libtsan2_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (21.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppjarn4rx/autoconf_2.72-3.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libisl23 arm64 0.27-1 [601 kB] Fetched 601 kB in 0s (29.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa0bennjn/libisl23_0.27-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libacl1 arm64 2.3.2-2+b1 [32.2 kB] Fetched 32.2 kB in 0s (1740 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptirnxekc/libacl1_2.3.2-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmount1 arm64 2.41.2-4 [199 kB] Fetched 199 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpma3kdfh_/libmount1_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-stdlib arm64 3.13.9-1 [1900 kB] Fetched 1900 kB in 0s (64.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjz4n_53g/libpython3.13-stdlib_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 base-files arm64 14 [72.9 kB] Fetched 72.9 kB in 0s (3062 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5a8xld05/base-files_14_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (1470 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph8f5qazk/media-types_14.0.0_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dpkg arm64 1.22.21 [1521 kB] Fetched 1521 kB in 0s (53.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0c_rn6ty/dpkg_1.22.21_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libattr1 arm64 1:2.5.2-3 [22.7 kB] Fetched 22.7 kB in 0s (1113 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_arm64.deb' to '/srv/rebuilderd/tmp/tmp8ue3v1h6/libattr1_2.5.2-3_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251202T205305Z forky/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-10 [626 kB] Fetched 626 kB in 0s (25.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu14rob81/libdb5.3t64_5.3.28+dfsg2-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmpfr6 arm64 4.2.2-2 [685 kB] Fetched 685 kB in 0s (31.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzk2cpeom/libmpfr6_4.2.2-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtool all 2.5.4-7 [540 kB] Fetched 540 kB in 0s (19.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpka5emj8s/libtool_2.5.4-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libcap2 arm64 1:2.75-10+b2 [28.1 kB] Fetched 28.1 kB in 0s (1514 kB/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b2_arm64.deb' to '/srv/rebuilderd/tmp/tmp6lbt08gn/libcap2_2.75-10+b2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-setuptools all 78.1.1-0.1 [738 kB] Fetched 738 kB in 0s (38.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4vuvfy7n/python3-setuptools_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 xz-utils arm64 5.8.1-2 [657 kB] Fetched 657 kB in 0s (31.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgy3k1ftv/xz-utils_5.8.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (783 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmpzl2zqvyf/libaudit-common_4.1.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libbinutils arm64 2.45.50.20251201-1 [670 kB] Fetched 670 kB in 0s (30.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq9tsse4t/libbinutils_2.45.50.20251201-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Fetched 11.4 kB in 0s (534 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq2s0jbr9/python3-jaraco.text_4.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 liblzma5 arm64 5.8.1-2 [302 kB] Fetched 302 kB in 0s (29.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8hd7fc65/liblzma5_5.8.1-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsmartcols1 arm64 2.41.2-4 [139 kB] Fetched 139 kB in 0s (6759 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9d3oowp3/libsmartcols1_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils-aarch64-linux-gnu arm64 2.45.50.20251201-1 [857 kB] Fetched 857 kB in 0s (39.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsbgchxba/binutils-aarch64-linux-gnu_2.45.50.20251201-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-15-aarch64-linux-gnu arm64 15.2.0-10 [11.1 MB] Fetched 11.1 MB in 0s (166 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnwm473vf/g++-15-aarch64-linux-gnu_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libxml2-16 arm64 2.15.1+dfsg-2+b1 [591 kB] Fetched 591 kB in 0s (53.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp16aj57q/libxml2-16_2.15.1+dfsg-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.14-stdlib arm64 3.14.0-5 [2165 kB] Fetched 2165 kB in 0s (58.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmd0deyq2/libpython3.14-stdlib_3.14.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp-15 arm64 15.2.0-10 [1280 B] Fetched 1280 B in 0s (63.2 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0_c7xtv1/cpp-15_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 util-linux arm64 2.41.2-4 [1121 kB] Fetched 1121 kB in 0s (43.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxha2c82h/util-linux_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dwz arm64 0.16-2 [100 kB] Fetched 100 kB in 0s (5385 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx7tfr9qq/dwz_0.16-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Fetched 917 kB in 0s (33.3 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpz36wka5x/zlib1g-dev_1.3.dfsg+really1.3.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libunistring5 arm64 1.3-2 [453 kB] Fetched 453 kB in 0s (22.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxb9vm8k0/libunistring5_1.3-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bzip2 arm64 1.0.8-6 [39.5 kB] Fetched 39.5 kB in 0s (2037 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq1yf0jco/bzip2_1.0.8-6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-all-dev arm64 3.13.9-2 [1072 B] Fetched 1072 B in 0s (60.3 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxmg3kl0x/python3-all-dev_3.13.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-zipp all 3.23.0-1 [11.0 kB] Fetched 11.0 kB in 0s (551 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo99xmttf/python3-zipp_3.23.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libaudit1 arm64 1:4.1.2-1+b1 [59.7 kB] Fetched 59.7 kB in 0s (0 B/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpzd3yu_tc/libaudit1_4.1.2-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (12.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi3_sl9ci/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (3700 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa6bn6h_s/autotools-dev_20240727.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Fetched 13.6 kB in 0s (748 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8ox42k5d/python3-autocommand_2.2.2-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libstdc++-15-dev arm64 15.2.0-10 [2348 kB] Fetched 2348 kB in 0s (76.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyzzmqra7/libstdc++-15-dev_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 file arm64 1:5.46-5 [43.7 kB] Fetched 43.7 kB in 0s (2371 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpmzfkl_52/file_5.46-5_arm64.deb' Downloading dependency 1 of 196: sysvinit-utils:arm64=3.15-6 Downloading dependency 2 of 196: libfile-stripnondeterminism-perl:arm64=1.15.0-1 Downloading dependency 3 of 196: cpp-15-aarch64-linux-gnu:arm64=15.2.0-10 Downloading dependency 4 of 196: ncurses-base:arm64=6.5+20251123-1 Downloading dependency 5 of 196: libpython3.13:arm64=3.13.9-1 Downloading dependency 6 of 196: liblsan0:arm64=15.2.0-10 Downloading dependency 7 of 196: libudev1:arm64=259~rc2-1 Downloading dependency 8 of 196: patch:arm64=2.8-2 Downloading dependency 9 of 196: tzdata:arm64=2025b-5 Downloading dependency 10 of 196: perl-modules-5.40:arm64=5.40.1-7 Downloading dependency 11 of 196: python3:arm64=3.13.9-2 Downloading dependency 12 of 196: libpython3.14-minimal:arm64=3.14.0-5 Downloading dependency 13 of 196: grep:arm64=3.12-1 Downloading dependency 14 of 196: libboost-dev:arm64=1.83.0.2+b2 Downloading dependency 15 of 196: gcc:arm64=4:15.2.0-4 Downloading dependency 16 of 196: libcrypt1:arm64=1:4.5.1-1 Downloading dependency 17 of 196: dh-exec:arm64=0.30+b1 Downloading dependency 18 of 196: liblapack3:arm64=3.12.1-7 Downloading dependency 19 of 196: libpython3.14:arm64=3.14.0-5 Downloading dependency 20 of 196: dash:arm64=0.5.12-12 Downloading dependency 21 of 196: libhwasan0:arm64=15.2.0-10 Downloading dependency 22 of 196: libjansson4:arm64=2.14-2+b3 Downloading dependency 23 of 196: python3-jaraco.functools:arm64=4.1.0-1 Downloading dependency 24 of 196: libmagic1t64:arm64=1:5.46-5 Downloading dependency 25 of 196: libitm1:arm64=15.2.0-10 Downloading dependency 26 of 196: cpp-aarch64-linux-gnu:arm64=4:15.2.0-4 Downloading dependency 27 of 196: libctf0:arm64=2.45.50.20251201-1 Downloading dependency 28 of 196: libffi8:arm64=3.5.2-2 Downloading dependency 29 of 196: libpython3-stdlib:arm64=3.13.9-2 Downloading dependency 30 of 196: libmpc3:arm64=1.3.1-2 Downloading dependency 31 of 196: python3.13-minimal:arm64=3.13.9-1 Downloading dependency 32 of 196: diffutils:arm64=1:3.12-1 Downloading dependency 33 of 196: libatomic1:arm64=15.2.0-10 Downloading dependency 34 of 196: gcc-15-base:arm64=15.2.0-10 Downloading dependency 35 of 196: libcap-ng0:arm64=0.8.5-4+b2 Downloading dependency 36 of 196: libzstd1:arm64=1.5.7+dfsg-2 Downloading dependency 37 of 196: mawk:arm64=1.3.4.20250131-1 Downloading dependency 38 of 196: groff-base:arm64=1.23.0-10 Downloading dependency 39 of 196: m4:arm64=1.4.20-2 Downloading dependency 40 of 196: libsimde-dev:arm64=0.8.2-3 Downloading dependency 41 of 196: libdebhelper-perl:arm64=13.28 Downloading dependency 42 of 196: gettext:arm64=0.23.2-1 Downloading dependency 43 of 196: libgcc-15-dev:arm64=15.2.0-10 Downloading dependency 44 of 196: libgomp1:arm64=15.2.0-10 Downloading dependency 45 of 196: dh-strip-nondeterminism:arm64=1.15.0-1 Downloading dependency 46 of 196: libcrypt-dev:arm64=1:4.5.1-1 Downloading dependency 47 of 196: openssl-provider-legacy:arm64=3.5.4-1 Downloading dependency 48 of 196: libbz2-1.0:arm64=1.0.8-6 Downloading dependency 49 of 196: libexpat1-dev:arm64=2.7.3-1 Downloading dependency 50 of 196: make:arm64=4.4.1-3 Downloading dependency 51 of 196: python3.13:arm64=3.13.9-1 Downloading dependency 52 of 196: libarchive-zip-perl:arm64=1.68-1 Downloading dependency 53 of 196: tar:arm64=1.35+dfsg-3.1 Downloading dependency 54 of 196: debianutils:arm64=5.23.2 Downloading dependency 55 of 196: netbase:arm64=6.5 Downloading dependency 56 of 196: libcc1-0:arm64=15.2.0-10 Downloading dependency 57 of 196: findutils:arm64=4.10.0-3 Downloading dependency 58 of 196: libpython3.14-dev:arm64=3.14.0-5 Downloading dependency 59 of 196: libssl3t64:arm64=3.5.4-1 Downloading dependency 60 of 196: python3-dev:arm64=3.13.9-2 Downloading dependency 61 of 196: libsframe2:arm64=2.45.50.20251201-1 Downloading dependency 62 of 196: g++-15:arm64=15.2.0-10 Downloading dependency 63 of 196: libubsan1:arm64=15.2.0-10 Downloading dependency 64 of 196: libjs-sphinxdoc:arm64=8.2.3-10 Downloading dependency 65 of 196: bsdextrautils:arm64=2.41.2-4 Downloading dependency 66 of 196: gzip:arm64=1.13-1 Downloading dependency 67 of 196: libgdbm-compat4t64:arm64=1.26-1 Downloading dependency 68 of 196: man-db:arm64=2.13.1-1 Downloading dependency 69 of 196: python3-pkg-resources:arm64=78.1.1-0.1 Downloading dependency 70 of 196: automake:arm64=1:1.18.1-3 Downloading dependency 71 of 196: python3-minimal:arm64=3.13.9-2 Downloading dependency 72 of 196: gettext-base:arm64=0.23.2-1 Downloading dependency 73 of 196: libpython3-dev:arm64=3.13.9-2 Downloading dependency 74 of 196: libgcc-s1:arm64=15.2.0-10 Downloading dependency 75 of 196: libmagic-mgc:arm64=1:5.46-5 Downloading dependency 76 of 196: sed:arm64=4.9-2+b1 Downloading dependency 77 of 196: debhelper:arm64=13.28 Downloading dependency 78 of 196: python3-more-itertools:arm64=10.8.0-1 Downloading dependency 79 of 196: libpam-modules:arm64=1.7.0-5 Downloading dependency 80 of 196: po-debconf:arm64=1.0.21+nmu1 Downloading dependency 81 of 196: autopoint:arm64=0.23.2-1 Downloading dependency 82 of 196: libdebconfclient0:arm64=0.282 Downloading dependency 83 of 196: libsystemd0:arm64=259~rc2-1 Downloading dependency 84 of 196: dpkg-dev:arm64=1.22.21 Downloading dependency 85 of 196: g++:arm64=4:15.2.0-4 Downloading dependency 86 of 196: libc6:arm64=2.41-12 Downloading dependency 87 of 196: gcc-aarch64-linux-gnu:arm64=4:15.2.0-4 Downloading dependency 88 of 196: libblkid1:arm64=2.41.2-4 Downloading dependency 89 of 196: python3-all:arm64=3.13.9-2 Downloading dependency 90 of 196: libncursesw6:arm64=6.5+20251123-1 Downloading dependency 91 of 196: linux-libc-dev:arm64=6.17.10-1 Downloading dependency 92 of 196: gcc-15:arm64=15.2.0-10 Downloading dependency 93 of 196: libtsan2:arm64=15.2.0-10 Downloading dependency 94 of 196: autoconf:arm64=2.72-3.1 Downloading dependency 95 of 196: libisl23:arm64=0.27-1 Downloading dependency 96 of 196: libacl1:arm64=2.3.2-2+b1 Downloading dependency 97 of 196: libmount1:arm64=2.41.2-4 Downloading dependency 98 of 196: libpython3.13-stdlib:arm64=3.13.9-1 Downloading dependency 99 of 196: base-files:arm64=14 Downloading dependency 100 of 196: media-types:arm64=14.0.0 Downloading dependency 101 of 196: dpkg:arm64=1.22.21 Downloading dependency 102 of 196: libattr1:arm64=1:2.5.2-3 Downloading dependency 103 of 196: libdb5.3t64:arm64=5.3.28+dfsg2-10 Downloading dependency 104 of 196: libmpfr6:arm64=4.2.2-2 Downloading dependency 105 of 196: libtool:arm64=2.5.4-7 Downloading dependency 106 of 196: libcap2:arm64=1:2.75-10+b2 Downloading dependency 107 of 196: python3-setuptools:arm64=78.1.1-0.1 Downloading dependency 108 of 196: xz-utils:arm64=5.8.1-2 Downloading dependency 109 of 196: libaudit-common:arm64=1:4.1.2-1 Downloading dependency 110 of 196: libbinutils:arm64=2.45.50.20251201-1 Downloading dependency 111 of 196: python3-jaraco.text:arm64=4.0.0-1 Downloading dependency 112 of 196: liblzma5:arm64=5.8.1-2 Downloading dependency 113 of 196: libsmartcols1:arm64=2.41.2-4 Downloading dependency 114 of 196: binutils-aarch64-linux-gnu:arm64=2.45.50.20251201-1 Downloading dependency 115 of 196: g++-15-aarch64-linux-gnu:arm64=15.2.0-10 Downloading dependency 116 of 196: libxml2-16:arm64=2.15.1+dfsg-2+b1 Downloading dependency 117 of 196: libpython3.14-stdlib:arm64=3.14.0-5 Downloading dependency 118 of 196: cpp-15:arm64=15.2.0-10 Downloading dependency 119 of 196: util-linux:arm64=2.41.2-4 Downloading dependency 120 of 196: dwz:arm64=0.16-2 Downloading dependency 121 of 196: zlib1g-dev:arm64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 122 of 196: libunistring5:arm64=1.3-2 Downloading dependency 123 of 196: bzip2:arm64=1.0.8-6 Downloading dependency 124 of 196: python3-all-dev:arm64=3.13.9-2 Downloading dependency 125 of 196: python3-zipp:arm64=3.23.0-1 Downloading dependency 126 of 196: libaudit1:arm64=1:4.1.2-1+b1 Downloading dependency 127 of 196: libpam-runtime:arm64=1.7.0-5 Downloading dependency 128 of 196: autotools-dev:arm64=20240727.1 Downloading dependency 129 of 196: python3-autocommand:arm64=2.2.2-3 Downloading dependency 130 of 196: libstdc++-15-dev:arm64=15.2.0-10 Downloading dependency 131 of 196: file:arm64=1:5.46-5 Downloading dependency 132 of 196: init-system-helpers:arm64=1.69Get:1 http://deb.debian.org/debian unstable/main arm64 init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (2222 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph5130s5o/init-system-helpers_1.69_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libmd0 arm64 1.1.0-2+b1 [33.7 kB] Fetched 33.7 kB in 0s (1654 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxud5hjg7/libmd0_1.1.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgmp10 arm64 2:6.3.0+dfsg-5 [535 kB] Fetched 535 kB in 0s (26.0 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5_arm64.deb' to '/srv/rebuilderd/tmp/tmpkt820m12/libgmp10_6.3.0+dfsg-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libsqlite3-0 arm64 3.46.1-8 [884 kB] Fetched 884 kB in 0s (32.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4xwgll3l/libsqlite3-0_3.46.1-8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Fetched 69.0 kB in 0s (3725 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeqvb_4j7/libuchardet0_0.0.8-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 base-passwd arm64 3.6.8 [54.0 kB] Fetched 54.0 kB in 0s (2828 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph0ylu9pz/base-passwd_3.6.8_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 hostname arm64 3.25 [10.8 kB] Fetched 10.8 kB in 0s (555 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx7nwctu3/hostname_3.25_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251202T205305Z forky/main arm64 libc-dev-bin arm64 2.41-12 [57.4 kB] Fetched 57.4 kB in 0s (2885 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8al05cec/libc-dev-bin_2.41-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 readline-common all 8.3-3 [74.8 kB] Fetched 74.8 kB in 0s (3620 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1zgeq_mw/readline-common_8.3-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libtinfo6 arm64 6.5+20251123-1 [345 kB] Fetched 345 kB in 0s (17.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1n_vqfvn/libtinfo6_6.5+20251123-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.14-minimal arm64 3.14.0-5 [2172 kB] Fetched 2172 kB in 0s (68.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpual4_lsa/python3.14-minimal_3.14.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpcre2-8-0 arm64 10.46-1 [262 kB] Fetched 262 kB in 0s (11.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgo7qfm_w/libpcre2-8-0_10.46-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251202T205305Z forky/main arm64 libc-bin arm64 2.41-12 [551 kB] Fetched 551 kB in 0s (26.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcnf3c6br/libc-bin_2.41-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libdpkg-perl all 1.22.21 [650 kB] Fetched 650 kB in 0s (31.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqvm9_bfi/libdpkg-perl_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-numpy arm64 1:2.3.5+ds-2+b1 [4183 kB] Fetched 4183 kB in 0s (88.8 MB/s) dpkg-name: info: moved 'python3-numpy_1%3a2.3.5+ds-2+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpulrdxfmg/python3-numpy_2.3.5+ds-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 bash arm64 5.3-1 [1507 kB] Fetched 1507 kB in 0s (57.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7__jl056/bash_5.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam-modules-bin arm64 1.7.0-5 [48.3 kB] Fetched 48.3 kB in 0s (2589 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi487mxle/libpam-modules-bin_1.7.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libexpat1 arm64 2.7.3-1 [96.5 kB] Fetched 96.5 kB in 0s (4554 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp33s166_y/libexpat1_2.7.3-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpam0g arm64 1.7.0-5 [68.8 kB] Fetched 68.8 kB in 0s (3335 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprtzjmmt6/libpam0g_1.7.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Fetched 92.4 kB in 0s (5082 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_0nl1pwm/python3-typing-extensions_4.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-minimal arm64 3.13.9-1 [858 kB] Fetched 858 kB in 0s (40.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9_md2zc7/libpython3.13-minimal_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 perl-base arm64 5.40.1-7 [1528 kB] Fetched 1528 kB in 0s (47.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7tdw7res/perl-base_5.40.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 coreutils arm64 9.7-3 [2949 kB] Fetched 2949 kB in 0s (94.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuwpzj0di/coreutils_9.7-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils arm64 2.45.50.20251201-1 [278 kB] Fetched 278 kB in 0s (13.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkftcsza1/binutils_2.45.50.20251201-1_arm64.deb' Get:1 http://snapshot.debian.org/archive/debian/20251202T205305Z forky/main arm64 libc6-dev arm64 2.41-12 [1621 kB] Fetched 1621 kB in 0s (58.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplfa_q_8g/libc6-dev_2.41-12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-autoreconf all 21 [12.2 kB] Fetched 12.2 kB in 0s (617 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj3bb_c6i/dh-autoreconf_21_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libboost1.83-dev arm64 1.83.0-5+b1 [10.6 MB] Fetched 10.6 MB in 0s (124 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj0frgbu9/libboost1.83-dev_1.83.0-5+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libuuid1 arm64 2.41.2-4 [37.8 kB] Fetched 37.8 kB in 0s (1721 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi2we__q8/libuuid1_2.41.2-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3-all-dev arm64 3.13.9-2 [1072 B] Fetched 1072 B in 0s (51.6 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp91qfqgbk/libpython3-all-dev_3.13.9-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 g++-aarch64-linux-gnu arm64 4:15.2.0-4 [1196 B] Fetched 1196 B in 0s (0 B/s) dpkg-name: info: moved 'g++-aarch64-linux-gnu_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmp6wrw7em6/g++-aarch64-linux-gnu_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libctf-nobfd0 arm64 2.45.50.20251201-1 [154 kB] Fetched 154 kB in 0s (8033 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ii_9mdi/libctf-nobfd0_2.45.50.20251201-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.13-dev arm64 3.13.9-1 [504 kB] Fetched 504 kB in 0s (21.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpanqntl9r/python3.13-dev_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-numpy-dev arm64 1:2.3.5+ds-2+b1 [136 kB] Fetched 136 kB in 0s (6358 kB/s) dpkg-name: info: moved 'python3-numpy-dev_1%3a2.3.5+ds-2+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmpq0io75k5/python3-numpy-dev_2.3.5+ds-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 cpp arm64 4:15.2.0-4 [1568 B] Fetched 1568 B in 0s (77.5 kB/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-4_arm64.deb' to '/srv/rebuilderd/tmp/tmpg3lgrtw5/cpp_15.2.0-4_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libasan8 arm64 15.2.0-10 [2600 kB] Fetched 2600 kB in 0s (71.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl3qy2aav/libasan8_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 zlib1g arm64 1:1.3.dfsg+really1.3.1-1+b1 [85.1 kB] Fetched 85.1 kB in 0s (3261 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb' to '/srv/rebuilderd/tmp/tmplk_7722c/zlib1g_1.3.dfsg+really1.3.1-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 rpcsvc-proto arm64 1.4.3-1+b1 [60.5 kB] Fetched 60.5 kB in 0s (2975 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0plm_4tb/rpcsvc-proto_1.4.3-1+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libelf1t64 arm64 0.194-1 [184 kB] Fetched 184 kB in 0s (9058 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeykle955/libelf1t64_0.194-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 build-essential arm64 12.12 [4624 B] Fetched 4624 B in 0s (253 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6nxyc38_/build-essential_12.12_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libblas3 arm64 3.12.1-7 [135 kB] Fetched 135 kB in 0s (6940 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6avje1gi/libblas3_3.12.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (5481 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp08iwn5dx/debconf_1.5.91_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 dh-python all 6.20251204.1 [114 kB] Fetched 114 kB in 0s (6461 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr6lc4ex1/dh-python_6.20251204.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 perl arm64 5.40.1-7 [267 kB] Fetched 267 kB in 0s (12.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp42p803ip/perl_5.40.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpython3.13-dev arm64 3.13.9-1 [5057 kB] Fetched 5057 kB in 0s (109 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1a0r8xk9/libpython3.13-dev_3.13.9-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libselinux1 arm64 3.9-4+b1 [80.8 kB] Fetched 80.8 kB in 0s (3692 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj8f0w2qx/libselinux1_3.9-4+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Fetched 169 kB in 0s (8897 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqrcmh0bv/libreadline8t64_8.3-3_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-inflect all 7.5.0-1 [33.0 kB] Fetched 33.0 kB in 0s (1392 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpshaprxs2/python3-inflect_7.5.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 ncurses-bin arm64 6.5+20251123-1 [438 kB] Fetched 438 kB in 0s (21.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7i60ppw9/ncurses-bin_6.5+20251123-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-typeguard all 4.4.4-1 [37.1 kB] Fetched 37.1 kB in 0s (2534 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2_8dg1i9/python3-typeguard_4.4.4-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 8276 B in 0s (496 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcgtu1oij/python3-jaraco.context_6.0.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 gcc-15-aarch64-linux-gnu arm64 15.2.0-10 [19.6 MB] Fetched 19.6 MB in 0s (135 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8spv55g7/gcc-15-aarch64-linux-gnu_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 binutils-common arm64 2.45.50.20251201-1 [2543 kB] Fetched 2543 kB in 0s (62.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpynukt96o/binutils-common_2.45.50.20251201-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libstdc++6 arm64 15.2.0-10 [647 kB] Fetched 647 kB in 0s (27.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0q8crjjt/libstdc++6_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 architecture-properties arm64 0.2.6 [2336 B] Fetched 2336 B in 0s (84.2 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkkox25_n/architecture-properties_0.2.6_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.14 arm64 3.14.0-5 [817 kB] Fetched 817 kB in 0s (39.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeu2x9i_s/python3.14_3.14.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgdbm6t64 arm64 1.26-1 [77.5 kB] Fetched 77.5 kB in 0s (4492 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp47t252e6/libgdbm6t64_1.26-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgfortran5 arm64 15.2.0-10 [371 kB] Fetched 371 kB in 0s (21.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpitrkunjb/libgfortran5_15.2.0-10_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 python3.14-dev arm64 3.14.0-5 [507 kB] Fetched 507 kB in 0s (25.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7k4gdw30/python3.14-dev_3.14.0-5_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libperl5.40 arm64 5.40.1-7 [4134 kB] Fetched 4134 kB in 0s (87.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp8fo701m/libperl5.40_5.40.1-7_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libpipeline1 arm64 1.5.8-2 [40.3 kB] Fetched 40.3 kB in 0s (1588 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn_2n_0lc/libpipeline1_1.5.8-2_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 swig arm64 4.4.0-1 [1405 kB] Fetched 1405 kB in 0s (44.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeligfl0w/swig_4.4.0-1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (1277 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpohwv7fwx/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libseccomp2 arm64 2.6.0-2+b1 [50.9 kB] Fetched 50.9 kB in 0s (3159 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5lbzea60/libseccomp2_2.6.0-2+b1_arm64.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (1477 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ovsj0gp/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main arm64 libgprofng0 arm64 2.45.50.20251201-1 [679 kB] Fetched 679 kB in 0s (32.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkzdy_hcu/libgprofng0_2.45.50.20251201-1_arm64.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_arm64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpqe0nu4wt/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: chroot architecture arm64 is equal to the host's architecture I: using /srv/rebuilderd/tmp/mmdebstrap.caQ2dL4K9f as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.caQ2dL4K9f 127.0.0.1 - - [06/Dec/2025 00:42:10] code 404, message File not found 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:34947 ./ InRelease 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:34947 ./ Release [462 B] 127.0.0.1 - - [06/Dec/2025 00:42:10] code 404, message File not found 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:34947 ./ Release.gpg 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:34947 ./ Packages [241 kB] Fetched 241 kB in 0s (7321 kB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./gcc-15-base_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libc6_2.41-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libgcc-s1_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./mawk_1.3.4.20250131-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./base-files_14_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libtinfo6_6.5%2b20251123-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./debianutils_5.23.2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./bash_5.3-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libacl1_2.3.2-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libattr1_2.5.2-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libcap2_2.75-10%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libgmp10_6.3.0%2bdfsg-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libpcre2-8-0_10.46-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libselinux1_3.9-4%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libzstd1_1.5.7%2bdfsg-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./zlib1g_1.3.dfsg%2breally1.3.1-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libssl3t64_3.5.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./openssl-provider-legacy_3.5.4-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libsystemd0_259%7erc2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./coreutils_9.7-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./dash_0.5.12-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./diffutils_3.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libbz2-1.0_1.0.8-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./liblzma5_5.8.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libmd0_1.1.0-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./tar_1.35%2bdfsg-3.1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./dpkg_1.22.21_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./findutils_4.10.0-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./grep_3.12-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./gzip_1.13-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./hostname_3.25_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./ncurses-bin_6.5%2b20251123-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libcrypt1_4.5.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./perl-base_5.40.1-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./sed_4.9-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libaudit-common_4.1.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libcap-ng0_0.8.5-4%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libaudit1_4.1.2-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libdb5.3t64_5.3.28%2bdfsg2-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./debconf_1.5.91_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libpam0g_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libpam-modules-bin_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libpam-modules_1.7.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libpam-runtime_1.7.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libblkid1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libmount1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libsmartcols1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libudev1_259%7erc2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libuuid1_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./util-linux_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libdebconfclient0_0.282_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./base-passwd_3.6.8_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./init-system-helpers_1.69_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./libc-bin_2.41-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./ncurses-base_6.5%2b20251123-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:10] "GET /./sysvinit-utils_3.15-6_arm64.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.caQ2dL4K9f 127.0.0.1 - - [06/Dec/2025 00:42:14] code 404, message File not found 127.0.0.1 - - [06/Dec/2025 00:42:14] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:34947 ./ InRelease 127.0.0.1 - - [06/Dec/2025 00:42:14] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:34947 ./ Release 127.0.0.1 - - [06/Dec/2025 00:42:14] code 404, message File not found 127.0.0.1 - - [06/Dec/2025 00:42:14] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:34947 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.caQ2dL4K9f usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libexpat1_2.7.3-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libpython3.13-minimal_3.13.9-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./python3.13-minimal_3.13.9-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./python3-minimal_3.13.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./media-types_14.0.0_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./netbase_6.5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./tzdata_2025b-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libffi8_3.5.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libncursesw6_6.5%2b20251123-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./readline-common_8.3-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libreadline8t64_8.3-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libsqlite3-0_3.46.1-8_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libpython3.13-stdlib_3.13.9-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./python3.13_3.13.9-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libpython3-stdlib_3.13.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./python3_3.13.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./python3-numpy-dev_2.3.5%2bds-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libblas3_3.12.1-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libgfortran5_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./liblapack3_3.12.1-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libstdc%2b%2b6_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./python3-numpy_2.3.5%2bds-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libpython3.14-minimal_3.14.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./python3.14-minimal_3.14.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./sensible-utils_0.0.26_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libuchardet0_0.0.8-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./groff-base_1.23.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./bsdextrautils_2.41.2-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libgdbm6t64_1.26-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libpipeline1_1.5.8-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libseccomp2_2.6.0-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./man-db_2.13.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./bzip2_1.0.8-6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libmagic-mgc_5.46-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libmagic1t64_5.46-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./file_5.46-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./gettext-base_0.23.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./perl-modules-5.40_5.40.1-7_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libgdbm-compat4t64_1.26-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libperl5.40_5.40.1-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./perl_5.40.1-7_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./xz-utils_5.8.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./architecture-properties_0.2.6_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./m4_1.4.20-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./autoconf_2.72-3.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./autotools-dev_20240727.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./automake_1.18.1-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./autopoint_0.23.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libsframe2_2.45.50.20251201-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./binutils-common_2.45.50.20251201-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libbinutils_2.45.50.20251201-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libgprofng0_2.45.50.20251201-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libctf-nobfd0_2.45.50.20251201-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libctf0_2.45.50.20251201-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libjansson4_2.14-2%2bb3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./binutils-aarch64-linux-gnu_2.45.50.20251201-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./binutils_2.45.50.20251201-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libc-dev-bin_2.41-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./linux-libc-dev_6.17.10-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libcrypt-dev_4.5.1-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./rpcsvc-proto_1.4.3-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libc6-dev_2.41-12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libisl23_0.27-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libmpfr6_4.2.2-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libmpc3_1.3.1-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./cpp-15-aarch64-linux-gnu_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./cpp-15_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./cpp-aarch64-linux-gnu_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./cpp_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libcc1-0_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:23] "GET /./libgomp1_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libitm1_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libatomic1_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libasan8_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./liblsan0_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libtsan2_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libubsan1_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libhwasan0_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libgcc-15-dev_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./gcc-15-aarch64-linux-gnu_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./gcc-15_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./gcc-aarch64-linux-gnu_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./gcc_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libstdc%2b%2b-15-dev_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./g%2b%2b-15-aarch64-linux-gnu_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./g%2b%2b-15_15.2.0-10_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./g%2b%2b-aarch64-linux-gnu_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./g%2b%2b_15.2.0-4_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./make_4.4.1-3_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libdpkg-perl_1.22.21_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./patch_2.8-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./dpkg-dev_1.22.21_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./build-essential_12.12_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libdebhelper-perl_13.28_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libtool_2.5.4-7_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./dh-autoreconf_21_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libarchive-zip-perl_1.68-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libfile-stripnondeterminism-perl_1.15.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./dh-strip-nondeterminism_1.15.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libelf1t64_0.194-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./dwz_0.16-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libunistring5_1.3-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libxml2-16_2.15.1%2bdfsg-2%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./gettext_0.23.2-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./intltool-debian_0.35.0%2b20060710.6_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./po-debconf_1.0.21%2bnmu1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./debhelper_13.28_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libpython3.13_3.13.9-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libboost1.83-dev_1.83.0-5%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libboost-dev_1.83.0.2%2bb2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./dh-exec_0.30%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libpython3.14-stdlib_3.14.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libpython3.14_3.14.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-more-itertools_10.8.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-jaraco.functools_4.1.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libsimde-dev_0.8.2-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libexpat1-dev_2.7.3-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./zlib1g-dev_1.3.dfsg%2breally1.3.1-1%2bb1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libpython3.14-dev_3.14.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libpython3.13-dev_3.13.9-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libpython3-dev_3.13.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3.13-dev_3.13.9-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libjs-sphinxdoc_8.2.3-10_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-dev_3.13.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-autocommand_2.2.2-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-typing-extensions_4.15.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-typeguard_4.4.4-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-inflect_7.5.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-jaraco.text_4.0.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-zipp_3.23.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-setuptools_78.1.1-0.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-jaraco.context_6.0.1-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-pkg-resources_78.1.1-0.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3.14_3.14.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-all_3.13.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./libpython3-all-dev_3.13.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3.14-dev_3.14.0-5_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./python3-all-dev_3.13.9-2_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./dh-python_6.20251204.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./swig_4.4.0-1_arm64.deb HTTP/1.1" 200 - 127.0.0.1 - - [06/Dec/2025 00:42:24] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpqe0nu4wt/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.caQ2dL4K9f Reading package lists... Building dependency tree... Reading state information... sysvinit-utils is already the newest version (3.15-6). libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. cpp-15-aarch64-linux-gnu is already the newest version (15.2.0-10). cpp-15-aarch64-linux-gnu set to manually installed. ncurses-base is already the newest version (6.5+20251123-1). libpython3.13 is already the newest version (3.13.9-1). libpython3.13 set to manually installed. liblsan0 is already the newest version (15.2.0-10). liblsan0 set to manually installed. libudev1 is already the newest version (259~rc2-1). patch is already the newest version (2.8-2). patch set to manually installed. tzdata is already the newest version (2025b-5). tzdata set to manually installed. perl-modules-5.40 is already the newest version (5.40.1-7). perl-modules-5.40 set to manually installed. python3 is already the newest version (3.13.9-2). python3 set to manually installed. libpython3.14-minimal is already the newest version (3.14.0-5). libpython3.14-minimal set to manually installed. grep is already the newest version (3.12-1). libboost-dev is already the newest version (1.83.0.2+b2). libboost-dev set to manually installed. gcc is already the newest version (4:15.2.0-4). gcc set to manually installed. libcrypt1 is already the newest version (1:4.5.1-1). dh-exec is already the newest version (0.30+b1). dh-exec set to manually installed. liblapack3 is already the newest version (3.12.1-7). liblapack3 set to manually installed. libpython3.14 is already the newest version (3.14.0-5). libpython3.14 set to manually installed. dash is already the newest version (0.5.12-12). libhwasan0 is already the newest version (15.2.0-10). libhwasan0 set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. libitm1 is already the newest version (15.2.0-10). libitm1 set to manually installed. cpp-aarch64-linux-gnu is already the newest version (4:15.2.0-4). cpp-aarch64-linux-gnu set to manually installed. libctf0 is already the newest version (2.45.50.20251201-1). libctf0 set to manually installed. libffi8 is already the newest version (3.5.2-2). libffi8 set to manually installed. libpython3-stdlib is already the newest version (3.13.9-2). libpython3-stdlib set to manually installed. libmpc3 is already the newest version (1.3.1-2). libmpc3 set to manually installed. python3.13-minimal is already the newest version (3.13.9-1). python3.13-minimal set to manually installed. diffutils is already the newest version (1:3.12-1). libatomic1 is already the newest version (15.2.0-10). libatomic1 set to manually installed. gcc-15-base is already the newest version (15.2.0-10). libcap-ng0 is already the newest version (0.8.5-4+b2). libzstd1 is already the newest version (1.5.7+dfsg-2). mawk is already the newest version (1.3.4.20250131-1). groff-base is already the newest version (1.23.0-10). groff-base set to manually installed. m4 is already the newest version (1.4.20-2). m4 set to manually installed. libsimde-dev is already the newest version (0.8.2-3). libsimde-dev set to manually installed. libdebhelper-perl is already the newest version (13.28). libdebhelper-perl set to manually installed. gettext is already the newest version (0.23.2-1). gettext set to manually installed. libgcc-15-dev is already the newest version (15.2.0-10). libgcc-15-dev set to manually installed. libgomp1 is already the newest version (15.2.0-10). libgomp1 set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. libcrypt-dev is already the newest version (1:4.5.1-1). libcrypt-dev set to manually installed. openssl-provider-legacy is already the newest version (3.5.4-1). libbz2-1.0 is already the newest version (1.0.8-6). libexpat1-dev is already the newest version (2.7.3-1). libexpat1-dev set to manually installed. make is already the newest version (4.4.1-3). make set to manually installed. python3.13 is already the newest version (3.13.9-1). python3.13 set to manually installed. libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. tar is already the newest version (1.35+dfsg-3.1). debianutils is already the newest version (5.23.2). netbase is already the newest version (6.5). netbase set to manually installed. libcc1-0 is already the newest version (15.2.0-10). libcc1-0 set to manually installed. findutils is already the newest version (4.10.0-3). libpython3.14-dev is already the newest version (3.14.0-5). libpython3.14-dev set to manually installed. libssl3t64 is already the newest version (3.5.4-1). python3-dev is already the newest version (3.13.9-2). python3-dev set to manually installed. libsframe2 is already the newest version (2.45.50.20251201-1). libsframe2 set to manually installed. g++-15 is already the newest version (15.2.0-10). g++-15 set to manually installed. libubsan1 is already the newest version (15.2.0-10). libubsan1 set to manually installed. libjs-sphinxdoc is already the newest version (8.2.3-10). libjs-sphinxdoc set to manually installed. bsdextrautils is already the newest version (2.41.2-4). bsdextrautils set to manually installed. gzip is already the newest version (1.13-1). libgdbm-compat4t64 is already the newest version (1.26-1). libgdbm-compat4t64 set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. python3-pkg-resources is already the newest version (78.1.1-0.1). python3-pkg-resources set to manually installed. automake is already the newest version (1:1.18.1-3). automake set to manually installed. python3-minimal is already the newest version (3.13.9-2). python3-minimal set to manually installed. gettext-base is already the newest version (0.23.2-1). gettext-base set to manually installed. libpython3-dev is already the newest version (3.13.9-2). libpython3-dev set to manually installed. libgcc-s1 is already the newest version (15.2.0-10). libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. sed is already the newest version (4.9-2+b1). debhelper is already the newest version (13.28). debhelper set to manually installed. python3-more-itertools is already the newest version (10.8.0-1). python3-more-itertools set to manually installed. libpam-modules is already the newest version (1.7.0-5). po-debconf is already the newest version (1.0.21+nmu1). po-debconf set to manually installed. autopoint is already the newest version (0.23.2-1). autopoint set to manually installed. libdebconfclient0 is already the newest version (0.282). libsystemd0 is already the newest version (259~rc2-1). dpkg-dev is already the newest version (1.22.21). dpkg-dev set to manually installed. g++ is already the newest version (4:15.2.0-4). g++ set to manually installed. libc6 is already the newest version (2.41-12). gcc-aarch64-linux-gnu is already the newest version (4:15.2.0-4). gcc-aarch64-linux-gnu set to manually installed. libblkid1 is already the newest version (2.41.2-4). python3-all is already the newest version (3.13.9-2). python3-all set to manually installed. libncursesw6 is already the newest version (6.5+20251123-1). libncursesw6 set to manually installed. linux-libc-dev is already the newest version (6.17.10-1). linux-libc-dev set to manually installed. gcc-15 is already the newest version (15.2.0-10). gcc-15 set to manually installed. libtsan2 is already the newest version (15.2.0-10). libtsan2 set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). libmount1 is already the newest version (2.41.2-4). libpython3.13-stdlib is already the newest version (3.13.9-1). libpython3.13-stdlib set to manually installed. base-files is already the newest version (14). media-types is already the newest version (14.0.0). media-types set to manually installed. dpkg is already the newest version (1.22.21). libattr1 is already the newest version (1:2.5.2-3). libdb5.3t64 is already the newest version (5.3.28+dfsg2-10). libmpfr6 is already the newest version (4.2.2-2). libmpfr6 set to manually installed. libtool is already the newest version (2.5.4-7). libtool set to manually installed. libcap2 is already the newest version (1:2.75-10+b2). python3-setuptools is already the newest version (78.1.1-0.1). python3-setuptools set to manually installed. xz-utils is already the newest version (5.8.1-2). xz-utils set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). libbinutils is already the newest version (2.45.50.20251201-1). libbinutils set to manually installed. python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. liblzma5 is already the newest version (5.8.1-2). libsmartcols1 is already the newest version (2.41.2-4). binutils-aarch64-linux-gnu is already the newest version (2.45.50.20251201-1). binutils-aarch64-linux-gnu set to manually installed. g++-15-aarch64-linux-gnu is already the newest version (15.2.0-10). g++-15-aarch64-linux-gnu set to manually installed. libxml2-16 is already the newest version (2.15.1+dfsg-2+b1). libxml2-16 set to manually installed. libpython3.14-stdlib is already the newest version (3.14.0-5). libpython3.14-stdlib set to manually installed. cpp-15 is already the newest version (15.2.0-10). cpp-15 set to manually installed. util-linux is already the newest version (2.41.2-4). dwz is already the newest version (0.16-2). dwz set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). zlib1g-dev set to manually installed. libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. python3-all-dev is already the newest version (3.13.9-2). python3-all-dev set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. libaudit1 is already the newest version (1:4.1.2-1+b1). libpam-runtime is already the newest version (1.7.0-5). autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. python3-autocommand is already the newest version (2.2.2-3). python3-autocommand set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-10). libstdc++-15-dev set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. init-system-helpers is already the newest version (1.69). libmd0 is already the newest version (1.1.0-2+b1). libgmp10 is already the newest version (2:6.3.0+dfsg-5). libsqlite3-0 is already the newest version (3.46.1-8). libsqlite3-0 set to manually installed. libuchardet0 is already the newest version (0.0.8-2). libuchardet0 set to manually installed. base-passwd is already the newest version (3.6.8). hostname is already the newest version (3.25). libc-dev-bin is already the newest version (2.41-12). libc-dev-bin set to manually installed. readline-common is already the newest version (8.3-3). readline-common set to manually installed. libtinfo6 is already the newest version (6.5+20251123-1). python3.14-minimal is already the newest version (3.14.0-5). python3.14-minimal set to manually installed. libpcre2-8-0 is already the newest version (10.46-1). libc-bin is already the newest version (2.41-12). libdpkg-perl is already the newest version (1.22.21). libdpkg-perl set to manually installed. python3-numpy is already the newest version (1:2.3.5+ds-2+b1). python3-numpy set to manually installed. bash is already the newest version (5.3-1). libpam-modules-bin is already the newest version (1.7.0-5). libexpat1 is already the newest version (2.7.3-1). libexpat1 set to manually installed. libpam0g is already the newest version (1.7.0-5). python3-typing-extensions is already the newest version (4.15.0-1). python3-typing-extensions set to manually installed. libpython3.13-minimal is already the newest version (3.13.9-1). libpython3.13-minimal set to manually installed. perl-base is already the newest version (5.40.1-7). coreutils is already the newest version (9.7-3). binutils is already the newest version (2.45.50.20251201-1). binutils set to manually installed. libc6-dev is already the newest version (2.41-12). libc6-dev set to manually installed. dh-autoreconf is already the newest version (21). dh-autoreconf set to manually installed. libboost1.83-dev is already the newest version (1.83.0-5+b1). libboost1.83-dev set to manually installed. libuuid1 is already the newest version (2.41.2-4). libpython3-all-dev is already the newest version (3.13.9-2). libpython3-all-dev set to manually installed. g++-aarch64-linux-gnu is already the newest version (4:15.2.0-4). g++-aarch64-linux-gnu set to manually installed. libctf-nobfd0 is already the newest version (2.45.50.20251201-1). libctf-nobfd0 set to manually installed. python3.13-dev is already the newest version (3.13.9-1). python3.13-dev set to manually installed. python3-numpy-dev is already the newest version (1:2.3.5+ds-2+b1). python3-numpy-dev set to manually installed. cpp is already the newest version (4:15.2.0-4). cpp set to manually installed. libasan8 is already the newest version (15.2.0-10). libasan8 set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). rpcsvc-proto is already the newest version (1.4.3-1+b1). rpcsvc-proto set to manually installed. libelf1t64 is already the newest version (0.194-1). libelf1t64 set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libblas3 is already the newest version (3.12.1-7). libblas3 set to manually installed. debconf is already the newest version (1.5.91). dh-python is already the newest version (6.20251204.1). dh-python set to manually installed. perl is already the newest version (5.40.1-7). perl set to manually installed. libpython3.13-dev is already the newest version (3.13.9-1). libpython3.13-dev set to manually installed. libselinux1 is already the newest version (3.9-4+b1). libreadline8t64 is already the newest version (8.3-3). libreadline8t64 set to manually installed. python3-inflect is already the newest version (7.5.0-1). python3-inflect set to manually installed. ncurses-bin is already the newest version (6.5+20251123-1). python3-typeguard is already the newest version (4.4.4-1). python3-typeguard set to manually installed. python3-jaraco.context is already the newest version (6.0.1-1). python3-jaraco.context set to manually installed. gcc-15-aarch64-linux-gnu is already the newest version (15.2.0-10). gcc-15-aarch64-linux-gnu set to manually installed. binutils-common is already the newest version (2.45.50.20251201-1). binutils-common set to manually installed. libstdc++6 is already the newest version (15.2.0-10). libstdc++6 set to manually installed. architecture-properties is already the newest version (0.2.6). architecture-properties set to manually installed. python3.14 is already the newest version (3.14.0-5). python3.14 set to manually installed. libgdbm6t64 is already the newest version (1.26-1). libgdbm6t64 set to manually installed. libgfortran5 is already the newest version (15.2.0-10). libgfortran5 set to manually installed. python3.14-dev is already the newest version (3.14.0-5). python3.14-dev set to manually installed. libperl5.40 is already the newest version (5.40.1-7). libperl5.40 set to manually installed. libpipeline1 is already the newest version (1.5.8-2). libpipeline1 set to manually installed. swig is already the newest version (4.4.0-1). swig set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libseccomp2 is already the newest version (2.6.0-2+b1). libseccomp2 set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. libgprofng0 is already the newest version (2.45.50.20251201-1). libgprofng0 set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.caQ2dL4K9f (Reading database ... 36582 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.caQ2dL4K9f I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.caQ2dL4K9f I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.caQ2dL4K9f... I: success in 76.9537 seconds Downloading dependency 133 of 196: libmd0:arm64=1.1.0-2+b1 Downloading dependency 134 of 196: libgmp10:arm64=2:6.3.0+dfsg-5 Downloading dependency 135 of 196: libsqlite3-0:arm64=3.46.1-8 Downloading dependency 136 of 196: libuchardet0:arm64=0.0.8-2 Downloading dependency 137 of 196: base-passwd:arm64=3.6.8 Downloading dependency 138 of 196: hostname:arm64=3.25 Downloading dependency 139 of 196: libc-dev-bin:arm64=2.41-12 Downloading dependency 140 of 196: readline-common:arm64=8.3-3 Downloading dependency 141 of 196: libtinfo6:arm64=6.5+20251123-1 Downloading dependency 142 of 196: python3.14-minimal:arm64=3.14.0-5 Downloading dependency 143 of 196: libpcre2-8-0:arm64=10.46-1 Downloading dependency 144 of 196: libc-bin:arm64=2.41-12 Downloading dependency 145 of 196: libdpkg-perl:arm64=1.22.21 Downloading dependency 146 of 196: python3-numpy:arm64=1:2.3.5+ds-2+b1 Downloading dependency 147 of 196: bash:arm64=5.3-1 Downloading dependency 148 of 196: libpam-modules-bin:arm64=1.7.0-5 Downloading dependency 149 of 196: libexpat1:arm64=2.7.3-1 Downloading dependency 150 of 196: libpam0g:arm64=1.7.0-5 Downloading dependency 151 of 196: python3-typing-extensions:arm64=4.15.0-1 Downloading dependency 152 of 196: libpython3.13-minimal:arm64=3.13.9-1 Downloading dependency 153 of 196: perl-base:arm64=5.40.1-7 Downloading dependency 154 of 196: coreutils:arm64=9.7-3 Downloading dependency 155 of 196: binutils:arm64=2.45.50.20251201-1 Downloading dependency 156 of 196: libc6-dev:arm64=2.41-12 Downloading dependency 157 of 196: dh-autoreconf:arm64=21 Downloading dependency 158 of 196: libboost1.83-dev:arm64=1.83.0-5+b1 Downloading dependency 159 of 196: libuuid1:arm64=2.41.2-4 Downloading dependency 160 of 196: libpython3-all-dev:arm64=3.13.9-2 Downloading dependency 161 of 196: g++-aarch64-linux-gnu:arm64=4:15.2.0-4 Downloading dependency 162 of 196: libctf-nobfd0:arm64=2.45.50.20251201-1 Downloading dependency 163 of 196: python3.13-dev:arm64=3.13.9-1 Downloading dependency 164 of 196: python3-numpy-dev:arm64=1:2.3.5+ds-2+b1 Downloading dependency 165 of 196: cpp:arm64=4:15.2.0-4 Downloading dependency 166 of 196: libasan8:arm64=15.2.0-10 Downloading dependency 167 of 196: zlib1g:arm64=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 168 of 196: rpcsvc-proto:arm64=1.4.3-1+b1 Downloading dependency 169 of 196: libelf1t64:arm64=0.194-1 Downloading dependency 170 of 196: build-essential:arm64=12.12 Downloading dependency 171 of 196: libblas3:arm64=3.12.1-7 Downloading dependency 172 of 196: debconf:arm64=1.5.91 Downloading dependency 173 of 196: dh-python:arm64=6.20251204.1 Downloading dependency 174 of 196: perl:arm64=5.40.1-7 Downloading dependency 175 of 196: libpython3.13-dev:arm64=3.13.9-1 Downloading dependency 176 of 196: libselinux1:arm64=3.9-4+b1 Downloading dependency 177 of 196: libreadline8t64:arm64=8.3-3 Downloading dependency 178 of 196: python3-inflect:arm64=7.5.0-1 Downloading dependency 179 of 196: ncurses-bin:arm64=6.5+20251123-1 Downloading dependency 180 of 196: python3-typeguard:arm64=4.4.4-1 Downloading dependency 181 of 196: python3-jaraco.context:arm64=6.0.1-1 Downloading dependency 182 of 196: gcc-15-aarch64-linux-gnu:arm64=15.2.0-10 Downloading dependency 183 of 196: binutils-common:arm64=2.45.50.20251201-1 Downloading dependency 184 of 196: libstdc++6:arm64=15.2.0-10 Downloading dependency 185 of 196: architecture-properties:arm64=0.2.6 Downloading dependency 186 of 196: python3.14:arm64=3.14.0-5 Downloading dependency 187 of 196: libgdbm6t64:arm64=1.26-1 Downloading dependency 188 of 196: libgfortran5:arm64=15.2.0-10 Downloading dependency 189 of 196: python3.14-dev:arm64=3.14.0-5 Downloading dependency 190 of 196: libperl5.40:arm64=5.40.1-7 Downloading dependency 191 of 196: libpipeline1:arm64=1.5.8-2 Downloading dependency 192 of 196: swig:arm64=4.4.0-1 Downloading dependency 193 of 196: intltool-debian:arm64=0.35.0+20060710.6 Downloading dependency 194 of 196: libseccomp2:arm64=2.6.0-2+b1 Downloading dependency 195 of 196: sensible-utils:arm64=0.0.26 Downloading dependency 196 of 196: libgprofng0:arm64=2.45.50.20251201-1 env --chdir=/srv/rebuilderd/tmp/rebuilderdJFhIUF/out DEB_BUILD_OPTIONS=parallel=8 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1764939832 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildialABX/debrebuild.sbuildrc.W5k_Jfm2oxNZ sbuild --build=arm64 --host=arm64 --no-source --arch-any --no-arch-all --binNMU-changelog= consensuscore (1.1.1+dfsg-8+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for arm64; no source changes. * Rebuild with Python 3.14 as supported -- arm Build Daemon (arm-ubc-01) Fri, 05 Dec 2025 13:03:52 +0000 --chroot=/srv/rebuilderd/tmp/debrebuildialABX/debrebuild.tar.6v4NUZNH972W --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=consensuscore-1.1.1+dfsg /srv/rebuilderd/tmp/rebuilderdJFhIUF/inputs/consensuscore_1.1.1+dfsg-8.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild: warning: descr(l1): found blank line where expected first heading sbuild (Debian sbuild) 0.89.3+deb13u1 (16 August 2025) on codethink02-arm64 +==============================================================================+ | consensuscore 1.1.1+dfsg-8+b1 (arm64) Sat, 06 Dec 2025 00:43:28 +0000 | +==============================================================================+ Package: consensuscore Version: 1.1.1+dfsg-8+b1 Source Version: 1.1.1+dfsg-8 Distribution: unstable Machine Architecture: arm64 Host Architecture: arm64 Build Architecture: arm64 Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildialABX/debrebuild.tar.6v4NUZNH972W to /srv/rebuilderd/tmp/tmp.sbuild.9HSkMWVjlK... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Sat, 06 Dec 2025 00:43:39 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdJFhIUF/inputs/consensuscore_1.1.1+dfsg-8.dsc exists in /srv/rebuilderd/tmp/rebuilderdJFhIUF/inputs; copying to chroot sbuild: warning: descr(l1): found blank line where expected first heading +------------------------------------------------------------------------------+ | Install package build dependencies Sat, 06 Dec 2025 00:43:42 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), architecture-is-64-bit, architecture-is-little-endian, dh-sequence-python3, dh-exec, libboost-dev, swig, python3-setuptools, python3-all-dev, python3-numpy, python3-numpy-dev, libsimde-dev, build-essential Filtered Build-Depends: debhelper-compat (= 13), architecture-is-64-bit, architecture-is-little-endian, dh-sequence-python3, dh-exec, libboost-dev, swig, python3-setuptools, python3-all-dev, python3-numpy, python3-numpy-dev, libsimde-dev, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-3dAbhU/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Sat, 06 Dec 2025 00:43:48 +0000 | +------------------------------------------------------------------------------+ Arch check ok (arm64 included in any) +------------------------------------------------------------------------------+ | Build environment Sat, 06 Dec 2025 00:43:49 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.57+deb13-cloud-arm64 #1 SMP Debian 6.12.57-1 (2025-11-05) arm64 (aarch64) Toolchain package versions: binutils_2.45.50.20251201-1 dpkg-dev_1.22.21 g++-15_15.2.0-10 gcc-15_15.2.0-10 libc6-dev_2.41-12 libstdc++-15-dev_15.2.0-10 libstdc++6_15.2.0-10 linux-libc-dev_6.17.10-1 Package versions: architecture-properties_0.2.6 autoconf_2.72-3.1 automake_1:1.18.1-3 autopoint_0.23.2-1 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8 bash_5.3-1 binutils_2.45.50.20251201-1 binutils-aarch64-linux-gnu_2.45.50.20251201-1 binutils-common_2.45.50.20251201-1 bsdextrautils_2.41.2-4 build-essential_12.12 bzip2_1.0.8-6 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-10 cpp-15-aarch64-linux-gnu_15.2.0-10 cpp-aarch64-linux-gnu_4:15.2.0-4 dash_0.5.12-12 debconf_1.5.91 debhelper_13.28 debianutils_5.23.2 dh-autoreconf_21 dh-exec_0.30+b1 dh-python_6.20251204.1 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.16-2 file_1:5.46-5 findutils_4.10.0-3 g++_4:15.2.0-4 g++-15_15.2.0-10 g++-15-aarch64-linux-gnu_15.2.0-10 g++-aarch64-linux-gnu_4:15.2.0-4 gcc_4:15.2.0-4 gcc-15_15.2.0-10 gcc-15-aarch64-linux-gnu_15.2.0-10 gcc-15-base_15.2.0-10 gcc-aarch64-linux-gnu_4:15.2.0-4 gettext_0.23.2-1 gettext-base_0.23.2-1 grep_3.12-1 groff-base_1.23.0-10 gzip_1.13-1 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libarchive-zip-perl_1.68-1 libasan8_15.2.0-10 libatomic1_15.2.0-10 libattr1_1:2.5.2-3 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.45.50.20251201-1 libblas3_3.12.1-7 libblkid1_2.41.2-4 libboost-dev_1.83.0.2+b2 libboost1.83-dev_1.83.0-5+b1 libbz2-1.0_1.0.8-6 libc-bin_2.41-12 libc-dev-bin_2.41-12 libc6_2.41-12 libc6-dev_2.41-12 libcap-ng0_0.8.5-4+b2 libcap2_1:2.75-10+b2 libcc1-0_15.2.0-10 libcrypt-dev_1:4.5.1-1 libcrypt1_1:4.5.1-1 libctf-nobfd0_2.45.50.20251201-1 libctf0_2.45.50.20251201-1 libdb5.3t64_5.3.28+dfsg2-10 libdebconfclient0_0.282 libdebhelper-perl_13.28 libdpkg-perl_1.22.21 libelf1t64_0.194-1 libexpat1_2.7.3-1 libexpat1-dev_2.7.3-1 libffi8_3.5.2-2 libfile-stripnondeterminism-perl_1.15.0-1 libgcc-15-dev_15.2.0-10 libgcc-s1_15.2.0-10 libgdbm-compat4t64_1.26-1 libgdbm6t64_1.26-1 libgfortran5_15.2.0-10 libgmp10_2:6.3.0+dfsg-5 libgomp1_15.2.0-10 libgprofng0_2.45.50.20251201-1 libhwasan0_15.2.0-10 libisl23_0.27-1 libitm1_15.2.0-10 libjansson4_2.14-2+b3 libjs-sphinxdoc_8.2.3-10 liblapack3_3.12.1-7 liblsan0_15.2.0-10 liblzma5_5.8.1-2 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41.2-4 libmpc3_1.3.1-2 libmpfr6_4.2.2-2 libncursesw6_6.5+20251123-1 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.46-1 libperl5.40_5.40.1-7 libpipeline1_1.5.8-2 libpython3-all-dev_3.13.9-2 libpython3-dev_3.13.9-2 libpython3-stdlib_3.13.9-2 libpython3.13_3.13.9-1 libpython3.13-dev_3.13.9-1 libpython3.13-minimal_3.13.9-1 libpython3.13-stdlib_3.13.9-1 libpython3.14_3.14.0-5 libpython3.14-dev_3.14.0-5 libpython3.14-minimal_3.14.0-5 libpython3.14-stdlib_3.14.0-5 libreadline8t64_8.3-3 libseccomp2_2.6.0-2+b1 libselinux1_3.9-4+b1 libsframe2_2.45.50.20251201-1 libsimde-dev_0.8.2-3 libsmartcols1_2.41.2-4 libsqlite3-0_3.46.1-8 libssl3t64_3.5.4-1 libstdc++-15-dev_15.2.0-10 libstdc++6_15.2.0-10 libsystemd0_259~rc2-1 libtinfo6_6.5+20251123-1 libtool_2.5.4-7 libtsan2_15.2.0-10 libubsan1_15.2.0-10 libuchardet0_0.0.8-2 libudev1_259~rc2-1 libunistring5_1.3-2 libuuid1_2.41.2-4 libxml2-16_2.15.1+dfsg-2+b1 libzstd1_1.5.7+dfsg-2 linux-libc-dev_6.17.10-1 m4_1.4.20-2 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20250131-1 media-types_14.0.0 ncurses-base_6.5+20251123-1 ncurses-bin_6.5+20251123-1 netbase_6.5 openssl-provider-legacy_3.5.4-1 patch_2.8-2 perl_5.40.1-7 perl-base_5.40.1-7 perl-modules-5.40_5.40.1-7 po-debconf_1.0.21+nmu1 python3_3.13.9-2 python3-all_3.13.9-2 python3-all-dev_3.13.9-2 python3-autocommand_2.2.2-3 python3-dev_3.13.9-2 python3-inflect_7.5.0-1 python3-jaraco.context_6.0.1-1 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-minimal_3.13.9-2 python3-more-itertools_10.8.0-1 python3-numpy_1:2.3.5+ds-2+b1 python3-numpy-dev_1:2.3.5+ds-2+b1 python3-pkg-resources_78.1.1-0.1 python3-setuptools_78.1.1-0.1 python3-typeguard_4.4.4-1 python3-typing-extensions_4.15.0-1 python3-zipp_3.23.0-1 python3.13_3.13.9-1 python3.13-dev_3.13.9-1 python3.13-minimal_3.13.9-1 python3.14_3.14.0-5 python3.14-dev_3.14.0-5 python3.14-minimal_3.14.0-5 readline-common_8.3-3 rpcsvc-proto_1.4.3-1+b1 sed_4.9-2+b1 sensible-utils_0.0.26 swig_4.4.0-1 sysvinit-utils_3.15-6 tar_1.35+dfsg-3.1 tzdata_2025b-5 util-linux_2.41.2-4 xz-utils_5.8.1-2 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Sat, 06 Dec 2025 00:43:49 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: consensuscore Binary: libconsensuscore-dev, python3-pbconsensuscore Architecture: any Version: 1.1.1+dfsg-8 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/PacificBiosciences/ConsensusCore Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/consensuscore Vcs-Git: https://salsa.debian.org/med-team/consensuscore.git Testsuite: autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), architecture-is-64-bit [!i386], architecture-is-little-endian, dh-sequence-python3, dh-exec, libboost-dev, swig, python3-setuptools, python3-all-dev, python3-numpy, python3-numpy-dev, libsimde-dev Package-List: libconsensuscore-dev deb libdevel optional arch=any python3-pbconsensuscore deb python optional arch=any Checksums-Sha1: 06118ce273ef10180336ab071fd86dc60aea7168 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 295d4089d3f91afce437f8da9d4e96e85a8e4355 10280 consensuscore_1.1.1+dfsg-8.debian.tar.xz Checksums-Sha256: 47865e3769e2d6647003f70ffce68f8a5b2f69a6ae04ff27d106b3ec84660d82 363936 consensuscore_1.1.1+dfsg.orig.tar.xz c6bca19d3f472d6c97567c42c6c677b2183a2d8086fd369e80cf46e9d781ef83 10280 consensuscore_1.1.1+dfsg-8.debian.tar.xz Files: 17991299008d1c01e25ce3984b7fe7bd 363936 consensuscore_1.1.1+dfsg.orig.tar.xz 5d616d8f06b526982012d298c45aa7d6 10280 consensuscore_1.1.1+dfsg-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmgGNmIRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBq4XA//bcI91SPBNTxHy/quKBMfF4T3ZZiWAHAF FVfbF6EbJqJILDeaXYGh38hdhXzTco/obJG7M7vH2SewPmF0A0juo7gOaWo/RO9o ovi13jIXzyYaYd0GOlUL1YJ5THSphPK0Mv9nwhRUZ6FjWCA6jI9ejzvzfcmPf++n sruEvyW0dTr+/921DUgMDRy0PbLs0V1sPZk3/OpqiRoMOPpiTLXU/SSIQDeZN0qX YJpgGs1SuOaAiu8hQo3vcM6xF4XDVxE5FP4OHENS807gDesbGIjisAuYDks2vZyj WZErGEgB9BoKwvbPUEWgJkiD6niuhvJUwSupz5I9TgO86zNspahW/V/SVHXbIl+D 7iaou+b3cFKVZ+u3hICuGNYVrOyFwQWrOwLKALatvDOtn7D253dlI6dftnGCjhs5 vJ3D3ezkNDRb/vrzoIIMROqtMfkd0kVDC/mbTWCceYbxdXQZovzOlc6Ms2Cw5xDZ 6QeAJ6owWy4Mzd5MX2K1xf+YsIh/et2C9BaEx6u1aIjPUoIu5o8XfItYcelD8YTY XAE3eRz+77+slNC1BcxgD9mll+oK6Fb9xCM5OhCwBscBw0ZyhO1ERN9NwD9YvT22 wOVn+EwkhzzLkjSxXRQ6EqrCVpcfNrI0g0J9CqwDoCjf2n+E8GsJ0skHwRjrA312 VptyoWtLIA8= =CHSG -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./consensuscore_1.1.1+dfsg-8.dsc: unsupported subcommand dpkg-source: info: extracting consensuscore in /build/reproducible-path/consensuscore-1.1.1+dfsg dpkg-source: info: unpacking consensuscore_1.1.1+dfsg.orig.tar.xz dpkg-source: info: unpacking consensuscore_1.1.1+dfsg-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling.patch dpkg-source: info: applying compiler-flags.patch dpkg-source: info: applying gcc-6.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying check_boost_version.patch dpkg-source: info: applying sequence_setuptools.patch dpkg-source: info: applying portable_simd.patch Check disk space ---------------- Sufficient free space for build Hack binNMU version ------------------- Created changelog entry for binNMU version 1.1.1+dfsg-8+b1 User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1764939832 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package consensuscore dpkg-buildpackage: info: source version 1.1.1+dfsg-8+b1 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by arm Build Daemon (arm-ubc-01) dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=pybuild debian/rules execute_before_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' ! test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i.orig src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_clean -O--buildsystem=pybuild I: pybuild base:317: python3.14 setup.py clean WARNING: '' not a valid package name; please use only .-separated package names in setup.py running clean removing '/build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.14' does not exist -- can't clean it I: pybuild base:317: python3.13 setup.py clean WARNING: '' not a valid package name; please use only .-separated package names in setup.py running clean removing '/build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild I: pybuild base:317: python3.14 setup.py config WARNING: '' not a valid package name; please use only .-separated package names in setup.py running config I: pybuild base:317: python3.13 setup.py config WARNING: '' not a valid package name; please use only .-separated package names in setup.py running config debian/rules execute_before_dh_auto_build make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' test -f src/SWIG/numpy.i.orig || mv -v src/SWIG/numpy.i src/SWIG/numpy.i.orig renamed 'src/SWIG/numpy.i' -> 'src/SWIG/numpy.i.orig' cp /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include/numpy/numpy.i src/SWIG/numpy.i make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_auto_build -a -O--buildsystem=pybuild I: pybuild base:317: /usr/bin/python3.14 setup.py build WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.4.0 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraphImpl.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraph.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/PoaGraphTraversals.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Poa/RangeFinder.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Statistics/Binomial.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Matrix/SparseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Matrix/DenseMatrix.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o -MM src/C++/Matrix/SparseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Read.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o -MM src/C++/Poa/PoaConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Features.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o -MM src/C++/Matrix/DenseMatrix.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Version.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o -MM src/C++/Poa/PoaGraph.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Edna/EdnaCounts.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o -MM src/C++/Features.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Checksum.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o In file included from /usr/include/simde/x86/sse2.h:35, from /usr/include/simde/x86/sse3.h:30, from src/C++/Edna/EdnaCounts.cpp:4: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o -MM src/C++/Edna/EdnaCounts.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o -MM src/C++/Version.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o -MM src/C++/Poa/RangeFinder.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o -MM src/C++/Read.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/PairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/AffineAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/LinearAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Align/AlignConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o -MM src/C++/Align/AlignConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/QuiverConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o -MM src/C++/Statistics/Binomial.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/detail/RecursorBase.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o -MM src/C++/Align/LinearAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o -MM src/C++/Align/AffineAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.d In file included from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:5, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/MutationScorer.hpp:12, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/MultiReadMutationScorer.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QuiverConsensus.hpp:6, from src/C++/Quiver/QuiverConsensus.cpp:3: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:30, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QvEvaluator.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:6: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o -MM src/C++/Align/PairwiseAlignment.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/ReadScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/QuiverConfig.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o -MM src/C++/Checksum.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o In file included from /usr/include/simde/x86/sse2.h:35, from /usr/include/simde/x86/sse3.h:30, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Edna/EdnaEvaluator.hpp:6, from src/C++/Quiver/detail/RecursorBase.cpp:6: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o -MM src/C++/Poa/PoaGraphTraversals.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o -MM src/C++/Quiver/MutationEnumerator.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.d In file included from /usr/include/simde/x86/sse2.h:35, from /usr/include/simde/x86/sse3.h:30, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QvEvaluator.hpp:6, from src/C++/Quiver/ReadScorer.cpp:7: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/SimpleRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o -MM src/C++/Quiver/QuiverConfig.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/SseRecursor.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/Diploid.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o In file included from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:5, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/MutationScorer.hpp:12, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/MultiReadMutationScorer.hpp:6, from src/C++/Quiver/MultiReadMutationScorer.cpp:5: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:30, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QvEvaluator.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:6: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o -MM src/C++/Quiver/ReadScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Quiver/MutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o -MM src/C++/Quiver/Diploid.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Feature.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o In file included from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:5, from src/C++/Quiver/SimpleRecursor.cpp:3: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:30, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QvEvaluator.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:6: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse2.h:35, from /usr/include/simde/x86/sse3.h:30, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Edna/EdnaEvaluator.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SseRecursor.hpp:5, from src/C++/Quiver/SseRecursor.cpp:3: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o -MM src/C++/Quiver/detail/RecursorBase.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Logging/Logging.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o -MM src/C++/Feature.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Sequence.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o -MM src/C++/Logging/Logging.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.d In file included from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:5, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/MutationScorer.hpp:12, from src/C++/Quiver/MutationScorer.cpp:3: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf log_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:182:13: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 182 | x, *reinterpret_cast(_ps_min_norm_pos)); /* cut off denormalized stuff */ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:193:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 193 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_mant_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/simde/x86/sse3.h:30, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/QvEvaluator.hpp:6, from /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/SimpleRecursor.hpp:6: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:203:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 203 | emm0 = _mm_sub_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf exp_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:347:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 347 | emm0 = _mm_add_epi32(emm0, *reinterpret_cast(_pi32_0x7f)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf sin_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:466:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 466 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:468:38: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 468 | sign_bit = _mm_and_ps(sign_bit, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:478:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 478 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:479:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 479 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:482:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 482 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:490:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 490 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘v4sf cos_ps(v4sf)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:582:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 582 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:591:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 591 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:592:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 592 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:595:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 595 | emm2 = _mm_sub_epi32(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:598:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 598 | emm0 = _mm_andnot_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:601:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 601 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h: In function ‘void sincos_ps(v4sf, v4sf*, v4sf*)’: /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:703:24: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 703 | x = _mm_and_ps(x, *reinterpret_cast(_ps_inv_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:705:46: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 705 | sign_bit_sin = _mm_and_ps(sign_bit_sin, *reinterpret_cast(_ps_sign_mask)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:715:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 715 | emm2 = _mm_add_epi32(emm2, *reinterpret_cast(_pi32_1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:716:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 716 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_inv1)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:722:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 722 | emm0 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:727:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 727 | emm2 = _mm_and_si128(emm2, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:778:33: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 778 | emm4 = _mm_sub_epi32(emm4, *reinterpret_cast(_pi32_2)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Quiver/detail/sse_mathfun.h:779:36: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] 779 | emm4 = _mm_andnot_si128(emm4, *reinterpret_cast(_pi32_4)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o -MM src/C++/Sequence.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Coverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:190:16: required from here 190 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:191:16: required from here 191 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:192:16: required from here 192 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SimpleRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:193:16: required from here 193 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:194:16: required from here 194 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::QvEvaluator]’: src/C++/Quiver/MutationScorer.cpp:195:16: required from here 195 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ src/C++/Quiver/MutationScorer.cpp: In instantiation of ‘ConsensusCore::MutationScorer::MutationScorer(const EvaluatorType&, const R&) [with R = ConsensusCore::SseRecursor; EvaluatorType = ConsensusCore::EdnaEvaluator]’: src/C++/Quiver/MutationScorer.cpp:196:16: required from here 196 | template class MutationScorer; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/C++/Quiver/MutationScorer.cpp:30:41: warning: catching polymorphic type ‘class ConsensusCore::AlphaBetaMismatchException’ by value [-Wcatch-value=] 30 | } catch (AlphaBetaMismatchException e) { | ^ g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Mutation.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o -MM src/C++/Quiver/QuiverConsensus.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -pedantic -std=c++14 -Wall -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -c src/C++/Utils.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o -MM src/C++/Coverage.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o -MM src/C++/Utils.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o -MM src/C++/Quiver/MultiReadMutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o -MM src/C++/Poa/PoaGraphImpl.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o -MM src/C++/Quiver/MutationScorer.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o -MM src/C++/Mutation.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o -MM src/C++/Quiver/SimpleRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.d g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -MT /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o -MM src/C++/Quiver/SseRecursor.cpp > /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.d ar crs /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphImpl.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraph.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PoaGraphTraversals.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RangeFinder.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Binomial.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SparseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/DenseMatrix.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Read.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Features.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Version.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/EdnaCounts.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Checksum.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/PairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AffineAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/LinearAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/AlignConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/RecursorBase.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/ReadScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/QuiverConfig.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SimpleRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/SseRecursor.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Diploid.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/MutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Feature.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Logging.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Sequence.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Coverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Mutation.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/Utils.o touch /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.4.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' I: pybuild base:317: /usr/bin/python3 setup.py build WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.4.0 PYTHON_INCLUDE = /usr/include/python3.13 NUMPY_INCLUDE = /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.4.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.13 -I /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make -f make/Cpp.mk -j8 make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestCoverage.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMatrixFacades.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPoaConsensus.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationEnumerator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestPairwiseAlignment.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMultiReadMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestRecursors.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutationScorer.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestDiploidQuiver.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestSparseVector.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestMutations.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o In file included from /usr/include/boost/bind/detail/requires_cxx11.hpp:9, from /usr/include/boost/bind/bind.hpp:24, from /usr/include/boost/bind.hpp:29, from /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/TestQvEvaluator.cpp:5: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O0 -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 -c /build/reproducible-path/consensuscore-1.1.1+dfsg/src/Tests/ParameterSettings.cpp -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestCoverage.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMatrixFacades.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPoaConsensus.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationEnumerator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestPairwiseAlignment.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMultiReadMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestRecursors.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutationScorer.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestDiploidQuiver.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestSparseVector.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestMutations.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/TestQvEvaluator.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/ParameterSettings.o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0 /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock-gtest-all.cc /build/reproducible-path/consensuscore-1.1.1+dfsg/external/gmock-1.7.0/gmock_main.cc -lpthread -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner GTEST_OUTPUT="xml:tests-summary.xml" /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Tests/test-runner Running main() from gmock_main.cc [==========] Running 158 tests from 29 test cases. [----------] Global test environment set-up. [----------] 3 tests from CoverageTests [ RUN ] CoverageTests.CoverageInWindowTest [ OK ] CoverageTests.CoverageInWindowTest (0 ms) [ RUN ] CoverageTests.CoveredIntervalsTest [ OK ] CoverageTests.CoveredIntervalsTest (0 ms) [ RUN ] CoverageTests.CoveredIntervalsTest2 [ OK ] CoverageTests.CoveredIntervalsTest2 (0 ms) [----------] 3 tests from CoverageTests (1 ms total) [----------] 11 tests from MatrixTest/0, where TypeParam = ConsensusCore::DenseMatrix [ RUN ] MatrixTest/0.Basic [ OK ] MatrixTest/0.Basic (1 ms) [ RUN ] MatrixTest/0.Nullability [ OK ] MatrixTest/0.Nullability (0 ms) [ RUN ] MatrixTest/0.Ranges [ OK ] MatrixTest/0.Ranges (0 ms) [ RUN ] MatrixTest/0.IsColumnEmpty [ OK ] MatrixTest/0.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/0.SSE [ OK ] MatrixTest/0.SSE (0 ms) [ RUN ] MatrixTest/0.ToHostArray [ OK ] MatrixTest/0.ToHostArray (0 ms) [ RUN ] MatrixTest/0.NonSequentialAccess [ OK ] MatrixTest/0.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/0.Holes [ OK ] MatrixTest/0.Holes (0 ms) [ RUN ] MatrixTest/0.BigBandedMatrix N13ConsensusCore11DenseMatrixE : 1000000 [ OK ] MatrixTest/0.BigBandedMatrix (2 ms) [ RUN ] MatrixTest/0.BigIrregularBandedMatrix [ OK ] MatrixTest/0.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/0.CopyTest [ OK ] MatrixTest/0.CopyTest (0 ms) [----------] 11 tests from MatrixTest/0 (4 ms total) [----------] 11 tests from MatrixTest/1, where TypeParam = ConsensusCore::SparseMatrix [ RUN ] MatrixTest/1.Basic [ OK ] MatrixTest/1.Basic (0 ms) [ RUN ] MatrixTest/1.Nullability [ OK ] MatrixTest/1.Nullability (0 ms) [ RUN ] MatrixTest/1.Ranges [ OK ] MatrixTest/1.Ranges (0 ms) [ RUN ] MatrixTest/1.IsColumnEmpty [ OK ] MatrixTest/1.IsColumnEmpty (0 ms) [ RUN ] MatrixTest/1.SSE [ OK ] MatrixTest/1.SSE (0 ms) [ RUN ] MatrixTest/1.ToHostArray [ OK ] MatrixTest/1.ToHostArray (0 ms) [ RUN ] MatrixTest/1.NonSequentialAccess [ OK ] MatrixTest/1.NonSequentialAccess (0 ms) [ RUN ] MatrixTest/1.Holes [ OK ] MatrixTest/1.Holes (0 ms) [ RUN ] MatrixTest/1.BigBandedMatrix N13ConsensusCore12SparseMatrixE : 1001976 [ OK ] MatrixTest/1.BigBandedMatrix (7 ms) [ RUN ] MatrixTest/1.BigIrregularBandedMatrix [ OK ] MatrixTest/1.BigIrregularBandedMatrix (0 ms) [ RUN ] MatrixTest/1.CopyTest [ OK ] MatrixTest/1.CopyTest (0 ms) [----------] 11 tests from MatrixTest/1 (9 ms total) [----------] 4 tests from PoaGraph [ RUN ] PoaGraph.SmallBasicTest [ OK ] PoaGraph.SmallBasicTest (0 ms) [ RUN ] PoaGraph.SmallExtraTests [ OK ] PoaGraph.SmallExtraTests (1 ms) [ RUN ] PoaGraph.SmallMismatchTests [ OK ] PoaGraph.SmallMismatchTests (0 ms) [ RUN ] PoaGraph.SmallDeletionTests [ OK ] PoaGraph.SmallDeletionTests (0 ms) [----------] 4 tests from PoaGraph (2 ms total) [----------] 8 tests from PoaConsensus [ RUN ] PoaConsensus.TestSimple [ OK ] PoaConsensus.TestSimple (0 ms) [ RUN ] PoaConsensus.TestOverhangSecond [ OK ] PoaConsensus.TestOverhangSecond (0 ms) [ RUN ] PoaConsensus.SmallSemiglobalTest [ OK ] PoaConsensus.SmallSemiglobalTest (0 ms) [ RUN ] PoaConsensus.SmallTilingTest [ OK ] PoaConsensus.SmallTilingTest (0 ms) [ RUN ] PoaConsensus.TestVerboseGraphVizOutput [ OK ] PoaConsensus.TestVerboseGraphVizOutput (0 ms) [ RUN ] PoaConsensus.TestLocalStaggered dot -Tpng local-staggered.dot > local-staggered.png sh: 1: dot: not found [ OK ] PoaConsensus.TestLocalStaggered (4 ms) [ RUN ] PoaConsensus.TestLongInsert [ OK ] PoaConsensus.TestLongInsert (0 ms) [ RUN ] PoaConsensus.NondeterminismRegressionTest [ OK ] PoaConsensus.NondeterminismRegressionTest (472 ms) [----------] 8 tests from PoaConsensus (479 ms total) [----------] 4 tests from MutationEnumerationTest [ RUN ] MutationEnumerationTest.TestAllMutations [ OK ] MutationEnumerationTest.TestAllMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueMutations [ OK ] MutationEnumerationTest.TestUniqueMutations (0 ms) [ RUN ] MutationEnumerationTest.TestUniqueNearbyMutations [ OK ] MutationEnumerationTest.TestUniqueNearbyMutations (2 ms) [ RUN ] MutationEnumerationTest.TestDinucleotideMutations [ OK ] MutationEnumerationTest.TestDinucleotideMutations (0 ms) [----------] 4 tests from MutationEnumerationTest (2 ms total) [----------] 3 tests from PairwiseAlignmentTests [ RUN ] PairwiseAlignmentTests.RepresentationTests [ OK ] PairwiseAlignmentTests.RepresentationTests (0 ms) [ RUN ] PairwiseAlignmentTests.GlobalAlignmentTests [ OK ] PairwiseAlignmentTests.GlobalAlignmentTests (0 ms) [ RUN ] PairwiseAlignmentTests.TargetPositionsInQueryTest [ OK ] PairwiseAlignmentTests.TargetPositionsInQueryTest (0 ms) [----------] 3 tests from PairwiseAlignmentTests (0 ms total) [----------] 2 tests from AffineAlignmentTests [ RUN ] AffineAlignmentTests.BasicTests [ OK ] AffineAlignmentTests.BasicTests (0 ms) [ RUN ] AffineAlignmentTests.LargeGapTest [ OK ] AffineAlignmentTests.LargeGapTest (7 ms) [----------] 2 tests from AffineAlignmentTests (7 ms total) [----------] 1 test from IupacAlignmentTests [ RUN ] IupacAlignmentTests.BasicTest [ OK ] IupacAlignmentTests.BasicTest (0 ms) [----------] 1 test from IupacAlignmentTests (0 ms total) [----------] 1 test from LinearAlignmentTests [ RUN ] LinearAlignmentTests.BasicTest [ OK ] LinearAlignmentTests.BasicTest (0 ms) [----------] 1 test from LinearAlignmentTests (0 ms total) [----------] 1 test from QuiverConfigTableTests [ RUN ] QuiverConfigTableTests.IllegalChemistry [ OK ] QuiverConfigTableTests.IllegalChemistry (1 ms) [----------] 1 test from QuiverConfigTableTests (1 ms total) [----------] 3 tests from MutationOrientationTests [ RUN ] MutationOrientationTests.ReadScoresMutation1 [ OK ] MutationOrientationTests.ReadScoresMutation1 (0 ms) [ RUN ] MutationOrientationTests.ReadScoresMutation2 [ OK ] MutationOrientationTests.ReadScoresMutation2 (0 ms) [ RUN ] MutationOrientationTests.OrientedMutation [ OK ] MutationOrientationTests.OrientedMutation (0 ms) [----------] 3 tests from MutationOrientationTests (0 ms total) [----------] 11 tests from MultiReadMutationScorerTest/0, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MultiReadMutationScorerTest/0.Template [ OK ] MultiReadMutationScorerTest/0.Template (0 ms) [ RUN ] MultiReadMutationScorerTest/0.BasicTest [ OK ] MultiReadMutationScorerTest/0.BasicTest (1 ms) [ RUN ] MultiReadMutationScorerTest/0.ManyMutationTest [ OK ] MultiReadMutationScorerTest/0.ManyMutationTest (1 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyConstructorTest [ OK ] MultiReadMutationScorerTest/0.CopyConstructorTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.ReverseStrandTest [ OK ] MultiReadMutationScorerTest/0.ReverseStrandTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtBeginning (0 ms) [ RUN ] MultiReadMutationScorerTest/0.TestMutationsAtEnd [ OK ] MultiReadMutationScorerTest/0.TestMutationsAtEnd (0 ms) [ RUN ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 [ OK ] MultiReadMutationScorerTest/0.NonSpanningReadsTest1 (1 ms) [ RUN ] MultiReadMutationScorerTest/0.CopyTest [ OK ] MultiReadMutationScorerTest/0.CopyTest (0 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseSubstitutionsAtBounds (0 ms) [ RUN ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds [ OK ] MultiReadMutationScorerTest/0.MultiBaseIndelsAtBounds (0 ms) [----------] 11 tests from MultiReadMutationScorerTest/0 (3 ms total) [----------] 7 tests from RecursorTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/0.SmallMatchTest [ OK ] RecursorTest/0.SmallMatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMismatchTest [ OK ] RecursorTest/0.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/0.SmallMergeTest [ OK ] RecursorTest/0.SmallMergeTest (0 ms) [ RUN ] RecursorTest/0.MediumSizedTest [ OK ] RecursorTest/0.MediumSizedTest (0 ms) [ RUN ] RecursorTest/0.LinkTest [ OK ] RecursorTest/0.LinkTest (0 ms) [ RUN ] RecursorTest/0.ExtendAlphaTest [ OK ] RecursorTest/0.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/0.ExtendBetaTest [ OK ] RecursorTest/0.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/0 (0 ms total) [----------] 7 tests from RecursorTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/1.SmallMatchTest [ OK ] RecursorTest/1.SmallMatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMismatchTest [ OK ] RecursorTest/1.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/1.SmallMergeTest [ OK ] RecursorTest/1.SmallMergeTest (0 ms) [ RUN ] RecursorTest/1.MediumSizedTest [ OK ] RecursorTest/1.MediumSizedTest (3 ms) [ RUN ] RecursorTest/1.LinkTest [ OK ] RecursorTest/1.LinkTest (0 ms) [ RUN ] RecursorTest/1.ExtendAlphaTest [ OK ] RecursorTest/1.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/1.ExtendBetaTest [ OK ] RecursorTest/1.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/1 (4 ms total) [----------] 7 tests from RecursorTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorTest/2.SmallMatchTest [ OK ] RecursorTest/2.SmallMatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMismatchTest [ OK ] RecursorTest/2.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/2.SmallMergeTest [ OK ] RecursorTest/2.SmallMergeTest (0 ms) [ RUN ] RecursorTest/2.MediumSizedTest [ OK ] RecursorTest/2.MediumSizedTest (2 ms) [ RUN ] RecursorTest/2.LinkTest [ OK ] RecursorTest/2.LinkTest (0 ms) [ RUN ] RecursorTest/2.ExtendAlphaTest [ OK ] RecursorTest/2.ExtendAlphaTest (0 ms) [ RUN ] RecursorTest/2.ExtendBetaTest [ OK ] RecursorTest/2.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/2 (3 ms total) [----------] 7 tests from RecursorTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorTest/3.SmallMatchTest [ OK ] RecursorTest/3.SmallMatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMismatchTest [ OK ] RecursorTest/3.SmallMismatchTest (0 ms) [ RUN ] RecursorTest/3.SmallMergeTest [ OK ] RecursorTest/3.SmallMergeTest (0 ms) [ RUN ] RecursorTest/3.MediumSizedTest [ OK ] RecursorTest/3.MediumSizedTest (3 ms) [ RUN ] RecursorTest/3.LinkTest [ OK ] RecursorTest/3.LinkTest (0 ms) [ RUN ] RecursorTest/3.ExtendAlphaTest [ OK ] RecursorTest/3.ExtendAlphaTest (1 ms) [ RUN ] RecursorTest/3.ExtendBetaTest [ OK ] RecursorTest/3.ExtendBetaTest (0 ms) [----------] 7 tests from RecursorTest/3 (4 ms total) [----------] 5 tests from RecursorFuzzTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/0.AlphaBetaConcordance [ OK ] RecursorFuzzTest/0.AlphaBetaConcordance (11 ms) [ RUN ] RecursorFuzzTest/0.Alignment [ OK ] RecursorFuzzTest/0.Alignment (12 ms) [ RUN ] RecursorFuzzTest/0.LinkAlphaBeta [ OK ] RecursorFuzzTest/0.LinkAlphaBeta (11 ms) [ RUN ] RecursorFuzzTest/0.ExtendAlpha [ OK ] RecursorFuzzTest/0.ExtendAlpha (12 ms) [ RUN ] RecursorFuzzTest/0.ExtendBeta [ OK ] RecursorFuzzTest/0.ExtendBeta (12 ms) [----------] 5 tests from RecursorFuzzTest/0 (59 ms total) [----------] 5 tests from RecursorFuzzTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/1.AlphaBetaConcordance [ OK ] RecursorFuzzTest/1.AlphaBetaConcordance (26 ms) [ RUN ] RecursorFuzzTest/1.Alignment [ OK ] RecursorFuzzTest/1.Alignment (28 ms) [ RUN ] RecursorFuzzTest/1.LinkAlphaBeta [ OK ] RecursorFuzzTest/1.LinkAlphaBeta (27 ms) [ RUN ] RecursorFuzzTest/1.ExtendAlpha [ OK ] RecursorFuzzTest/1.ExtendAlpha (13 ms) [ RUN ] RecursorFuzzTest/1.ExtendBeta [ OK ] RecursorFuzzTest/1.ExtendBeta (13 ms) [----------] 5 tests from RecursorFuzzTest/1 (107 ms total) [----------] 5 tests from RecursorFuzzTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] RecursorFuzzTest/2.AlphaBetaConcordance [ OK ] RecursorFuzzTest/2.AlphaBetaConcordance (45 ms) [ RUN ] RecursorFuzzTest/2.Alignment [ OK ] RecursorFuzzTest/2.Alignment (42 ms) [ RUN ] RecursorFuzzTest/2.LinkAlphaBeta [ OK ] RecursorFuzzTest/2.LinkAlphaBeta (50 ms) [ RUN ] RecursorFuzzTest/2.ExtendAlpha [ OK ] RecursorFuzzTest/2.ExtendAlpha (15 ms) [ RUN ] RecursorFuzzTest/2.ExtendBeta [ OK ] RecursorFuzzTest/2.ExtendBeta (14 ms) [----------] 5 tests from RecursorFuzzTest/2 (169 ms total) [----------] 5 tests from RecursorFuzzTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] RecursorFuzzTest/3.AlphaBetaConcordance [ OK ] RecursorFuzzTest/3.AlphaBetaConcordance (40 ms) [ RUN ] RecursorFuzzTest/3.Alignment [ OK ] RecursorFuzzTest/3.Alignment (49 ms) [ RUN ] RecursorFuzzTest/3.LinkAlphaBeta [ OK ] RecursorFuzzTest/3.LinkAlphaBeta (41 ms) [ RUN ] RecursorFuzzTest/3.ExtendAlpha [ OK ] RecursorFuzzTest/3.ExtendAlpha (13 ms) [ RUN ] RecursorFuzzTest/3.ExtendBeta [ OK ] RecursorFuzzTest/3.ExtendBeta (14 ms) [----------] 5 tests from RecursorFuzzTest/3 (159 ms total) [----------] 8 tests from MutationScorerTest/0, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/0.BasicTest [ OK ] MutationScorerTest/0.BasicTest (1 ms) [ RUN ] MutationScorerTest/0.CopyTest [ OK ] MutationScorerTest/0.CopyTest (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtBeginning [ OK ] MutationScorerTest/0.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/0.MutationsAtEnd [ OK ] MutationScorerTest/0.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/0.TinyTemplate [ OK ] MutationScorerTest/0.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/0.TemplateMutationWorkflow [ OK ] MutationScorerTest/0.TemplateMutationWorkflow (1 ms) [ RUN ] MutationScorerTest/0.DinucleotideInsertionTest [ OK ] MutationScorerTest/0.DinucleotideInsertionTest (2 ms) [ RUN ] MutationScorerTest/0.DinucleotideDeletionTest [ OK ] MutationScorerTest/0.DinucleotideDeletionTest (0 ms) [----------] 8 tests from MutationScorerTest/0 (4 ms total) [----------] 8 tests from MutationScorerTest/1, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/1.BasicTest [ OK ] MutationScorerTest/1.BasicTest (0 ms) [ RUN ] MutationScorerTest/1.CopyTest [ OK ] MutationScorerTest/1.CopyTest (0 ms) [ RUN ] MutationScorerTest/1.MutationsAtBeginning [ OK ] MutationScorerTest/1.MutationsAtBeginning (1 ms) [ RUN ] MutationScorerTest/1.MutationsAtEnd [ OK ] MutationScorerTest/1.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/1.TinyTemplate [ OK ] MutationScorerTest/1.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/1.TemplateMutationWorkflow [ OK ] MutationScorerTest/1.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/1.DinucleotideInsertionTest [ OK ] MutationScorerTest/1.DinucleotideInsertionTest (1 ms) [ RUN ] MutationScorerTest/1.DinucleotideDeletionTest [ OK ] MutationScorerTest/1.DinucleotideDeletionTest (0 ms) [----------] 8 tests from MutationScorerTest/1 (2 ms total) [----------] 8 tests from MutationScorerTest/2, where TypeParam = ConsensusCore::SimpleRecursor [ RUN ] MutationScorerTest/2.BasicTest [ OK ] MutationScorerTest/2.BasicTest (0 ms) [ RUN ] MutationScorerTest/2.CopyTest [ OK ] MutationScorerTest/2.CopyTest (0 ms) [ RUN ] MutationScorerTest/2.MutationsAtBeginning [ OK ] MutationScorerTest/2.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/2.MutationsAtEnd [ OK ] MutationScorerTest/2.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/2.TinyTemplate [ OK ] MutationScorerTest/2.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/2.TemplateMutationWorkflow [ OK ] MutationScorerTest/2.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/2.DinucleotideInsertionTest [ OK ] MutationScorerTest/2.DinucleotideInsertionTest (3 ms) [ RUN ] MutationScorerTest/2.DinucleotideDeletionTest [ OK ] MutationScorerTest/2.DinucleotideDeletionTest (0 ms) [----------] 8 tests from MutationScorerTest/2 (5 ms total) [----------] 8 tests from MutationScorerTest/3, where TypeParam = ConsensusCore::SseRecursor [ RUN ] MutationScorerTest/3.BasicTest [ OK ] MutationScorerTest/3.BasicTest (0 ms) [ RUN ] MutationScorerTest/3.CopyTest [ OK ] MutationScorerTest/3.CopyTest (0 ms) [ RUN ] MutationScorerTest/3.MutationsAtBeginning [ OK ] MutationScorerTest/3.MutationsAtBeginning (0 ms) [ RUN ] MutationScorerTest/3.MutationsAtEnd [ OK ] MutationScorerTest/3.MutationsAtEnd (0 ms) [ RUN ] MutationScorerTest/3.TinyTemplate [ OK ] MutationScorerTest/3.TinyTemplate (0 ms) [ RUN ] MutationScorerTest/3.TemplateMutationWorkflow [ OK ] MutationScorerTest/3.TemplateMutationWorkflow (0 ms) [ RUN ] MutationScorerTest/3.DinucleotideInsertionTest [ OK ] MutationScorerTest/3.DinucleotideInsertionTest (1 ms) [ RUN ] MutationScorerTest/3.DinucleotideDeletionTest [ OK ] MutationScorerTest/3.DinucleotideDeletionTest (1 ms) [----------] 8 tests from MutationScorerTest/3 (4 ms total) [----------] 2 tests from SparseVectorTest [ RUN ] SparseVectorTest.BasicTest [ OK ] SparseVectorTest.BasicTest (0 ms) [ RUN ] SparseVectorTest.BasicTest2 [ OK ] SparseVectorTest.BasicTest2 (0 ms) [----------] 2 tests from SparseVectorTest (0 ms total) [----------] 1 test from SparseVector [ RUN ] SparseVector.CopyTest [ OK ] SparseVector.CopyTest (0 ms) [----------] 1 test from SparseVector (0 ms total) [----------] 7 tests from MutationTest [ RUN ] MutationTest.BasicTest [ OK ] MutationTest.BasicTest (0 ms) [ RUN ] MutationTest.DeleteTest [ OK ] MutationTest.DeleteTest (0 ms) [ RUN ] MutationTest.InsertTest [ OK ] MutationTest.InsertTest (0 ms) [ RUN ] MutationTest.ApplyMutationsTest [ OK ] MutationTest.ApplyMutationsTest (0 ms) [ RUN ] MutationTest.ApplyMutationsToSamePositionTest [ OK ] MutationTest.ApplyMutationsToSamePositionTest (0 ms) [ RUN ] MutationTest.MutationsToTranscript [ OK ] MutationTest.MutationsToTranscript (0 ms) [ RUN ] MutationTest.MutatedTemplatePositionsTest [ OK ] MutationTest.MutatedTemplatePositionsTest (0 ms) [----------] 7 tests from MutationTest (0 ms total) [----------] 5 tests from QvEvaluatorTest [ RUN ] QvEvaluatorTest.IncVsInc4 [ OK ] QvEvaluatorTest.IncVsInc4 (46 ms) [ RUN ] QvEvaluatorTest.DelVsDel4 [ OK ] QvEvaluatorTest.DelVsDel4 (44 ms) [ RUN ] QvEvaluatorTest.ExtraVsExtra4 [ OK ] QvEvaluatorTest.ExtraVsExtra4 (54 ms) [ RUN ] QvEvaluatorTest.MergeVsMerge4 [ OK ] QvEvaluatorTest.MergeVsMerge4 (34 ms) [ RUN ] QvEvaluatorTest.BadTagTest [ OK ] QvEvaluatorTest.BadTagTest (2 ms) [----------] 5 tests from QvEvaluatorTest (184 ms total) [----------] Global test environment tear-down [==========] 158 tests from 29 test cases ran. (1215 ms total) [ PASSED ] 158 tests. make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' /usr/bin/make test-python make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[3]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.4.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.13 -I /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. 1.0.2 Python3 build is OK! make[3]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install -a -O--buildsystem=pybuild I: pybuild base:317: /usr/bin/python3.14 setup.py install --root /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.4.0 PYTHON_INCLUDE = /usr/include/python3.14 NUMPY_INCLUDE = /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.4.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.14 -I /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running install_lib running build_py copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build copying build/Python/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build creating /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.14_pbconsensuscore/build/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages byte-compiling /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore.py to ConsensusCore.cpython-314.pyc running install_egg_info running egg_info creating build/Python/ConsensusCore.egg-info writing build/Python/ConsensusCore.egg-info/PKG-INFO writing dependency_links to build/Python/ConsensusCore.egg-info/dependency_links.txt writing top-level names to build/Python/ConsensusCore.egg-info/top_level.txt writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' reading manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' adding license file 'LICENSES' writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' Copying build/Python/ConsensusCore.egg-info to /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.14/dist-packages/ConsensusCore-1.0.2.egg-info Skipping SOURCES.txt running install_scripts I: pybuild base:317: /usr/bin/python3 setup.py install --root /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore WARNING: '' not a valid package name; please use only .-separated package names in setup.py running build ConsensusCore configuration summary ----------------------------------- BOOST = /usr/include/ SWIG = /usr/bin/swig SWIG_LIB = /usr/share/swig/4.4.0 PYTHON_INCLUDE = /usr/include/python3.13 NUMPY_INCLUDE = /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include DEBUG = CPP_STD = c++14 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Cpp.mk -j8 make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[2]: '/build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a' is up to date. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make -f make/Python.mk make[2]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' mkdir -p /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python SWIG_LIB=/usr/share/swig/4.4.0 /usr/bin/swig -Wall -c++ -python -builtin -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -module ConsensusCore -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx src/SWIG/ConsensusCore.i /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Feature.hpp:20: Warning 309: private inheritance from base 'boost::shared_array< T >' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Matrix/DenseMatrix.hpp:28: Warning 309: private inheritance from base 'boost_dense_matrix' (ignored). /build/reproducible-path/consensuscore-1.1.1+dfsg/include/ConsensusCore/Poa/PoaConsensus.hpp:24: Warning 309: private inheritance from base 'noncopyable' (ignored). g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/consensuscore-1.1.1+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fopenmp-simd -DSIMDE_ENABLE_OPENMP -Wno-psabi -O3 -O3 -DNDEBUG -g -fPIC -fno-omit-frame-pointer -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I/usr/include/ -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,-O1 -I/build/reproducible-path/consensuscore-1.1.1+dfsg/include -I/build/reproducible-path/consensuscore-1.1.1+dfsg/external -I /usr/include/python3.13 -I /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/ConsensusCore_wrap.cxx /build/reproducible-path/consensuscore-1.1.1+dfsg/build/C++/libConsensusCore.a -o /build/reproducible-path/consensuscore-1.1.1+dfsg/build/Python/_ConsensusCore.so /usr/lib/gcc/aarch64-linux-gnu/15/libstdc++.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[2]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:90: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running install_lib running build_py copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build copying build/Python/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build copying build/Python/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build creating /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.13/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build/ConsensusCore.py -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.13/dist-packages copying /build/reproducible-path/consensuscore-1.1.1+dfsg/.pybuild/cpython3_3.13_pbconsensuscore/build/_ConsensusCore.so -> /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.13/dist-packages byte-compiling /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.13/dist-packages/ConsensusCore.py to ConsensusCore.cpython-313.pyc running install_egg_info running egg_info writing build/Python/ConsensusCore.egg-info/PKG-INFO writing dependency_links to build/Python/ConsensusCore.egg-info/dependency_links.txt writing top-level names to build/Python/ConsensusCore.egg-info/top_level.txt reading manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' adding license file 'LICENSES' writing manifest file 'build/Python/ConsensusCore.egg-info/SOURCES.txt' Copying build/Python/ConsensusCore.egg-info to /build/reproducible-path/consensuscore-1.1.1+dfsg/debian/python3-pbconsensuscore/usr/lib/python3.13/dist-packages/ConsensusCore-1.0.2.egg-info Skipping SOURCES.txt running install_scripts dh_install -a -O--buildsystem=pybuild debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' find debian -name meson.build -delete make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_python3 -a -O--buildsystem=pybuild I: dh_python3 fs:432: renaming _ConsensusCore.so to _ConsensusCore.cpython-313-aarch64-linux-gnu.so I: dh_python3 fs:432: renaming _ConsensusCore.so to _ConsensusCore.cpython-314-aarch64-linux-gnu.so debian/rules execute_after_dh_python3 make[1]: Entering directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_numpy3 dh_numpy3: skipping binary package libconsensuscore-dev which does not depend on the NumPy C ABI make[1]: Leaving directory '/build/reproducible-path/consensuscore-1.1.1+dfsg' dh_installsystemduser -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package libconsensuscore-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'libconsensuscore-dev' in '../libconsensuscore-dev_1.1.1+dfsg-8+b1_arm64.deb'. dpkg-deb: building package 'python3-pbconsensuscore-dbgsym' in '../python3-pbconsensuscore-dbgsym_1.1.1+dfsg-8+b1_arm64.deb'. dpkg-deb: building package 'python3-pbconsensuscore' in '../python3-pbconsensuscore_1.1.1+dfsg-8+b1_arm64.deb'. dpkg-genbuildinfo --build=any -O../consensuscore_1.1.1+dfsg-8+b1_arm64.buildinfo dpkg-genchanges --build=any -O../consensuscore_1.1.1+dfsg-8+b1_arm64.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-12-06T00:54:53Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Sat, 06 Dec 2025 00:54:55 +0000 | +------------------------------------------------------------------------------+ consensuscore_1.1.1+dfsg-8+b1_arm64.changes: -------------------------------------------- Format: 1.8 Date: Fri, 05 Dec 2025 13:03:52 +0000 Source: consensuscore (1.1.1+dfsg-8) Binary: libconsensuscore-dev python3-pbconsensuscore python3-pbconsensuscore-dbgsym Binary-Only: yes Architecture: arm64 Version: 1.1.1+dfsg-8+b1 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team Changed-By: arm Build Daemon (arm-ubc-01) Description: libconsensuscore-dev - algorithms for PacBio multiple sequence consensus -- development python3-pbconsensuscore - algorithms for PacBio multiple sequence consensus -- Python 3 Changes: consensuscore (1.1.1+dfsg-8+b1) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for arm64; no source changes. * Rebuild with Python 3.14 as supported Checksums-Sha1: 01056889a5afbf06186b0f1b2db5c12afdb08f25 7398 consensuscore_1.1.1+dfsg-8+b1_arm64.buildinfo 81283c2182e5ae4e71d8711434e9093e43c0fd59 464556 libconsensuscore-dev_1.1.1+dfsg-8+b1_arm64.deb 8e7b9cf814c7e4cc506bb09a092f490c2ebafdd5 16971020 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-8+b1_arm64.deb 77592a94e2373eef10bcc81bfc2dcad56a28f2fd 823232 python3-pbconsensuscore_1.1.1+dfsg-8+b1_arm64.deb Checksums-Sha256: b9ffa6fc561ae4580c6c6137f64e19c04798fda11fb029e7e75bf49378b77b09 7398 consensuscore_1.1.1+dfsg-8+b1_arm64.buildinfo 12d7d9a687d205af42d057de6e0c6fb58ed7a9d5bebc410e6340cb786ee77812 464556 libconsensuscore-dev_1.1.1+dfsg-8+b1_arm64.deb 7501cc5dfee0866679f1cfed9a5ac45831bd3676fb5b936139981661c59bf563 16971020 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-8+b1_arm64.deb afef1341e76e05858ee05df75e22cc027cbca37b87694471f49690f39777cb77 823232 python3-pbconsensuscore_1.1.1+dfsg-8+b1_arm64.deb Files: 5a97392b849cec705b0dfdc1f4a7e705 7398 science optional consensuscore_1.1.1+dfsg-8+b1_arm64.buildinfo 6905764388e4a151bf914c24cc74b94e 464556 libdevel optional libconsensuscore-dev_1.1.1+dfsg-8+b1_arm64.deb 7f93c7a41af0e590e48a3f0ddb6b1c54 16971020 debug optional python3-pbconsensuscore-dbgsym_1.1.1+dfsg-8+b1_arm64.deb 42e1610c7a6419851e1ee201adb4ee52 823232 python optional python3-pbconsensuscore_1.1.1+dfsg-8+b1_arm64.deb +------------------------------------------------------------------------------+ | Buildinfo Sat, 06 Dec 2025 00:54:56 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: consensuscore (1.1.1+dfsg-8) Binary: libconsensuscore-dev python3-pbconsensuscore python3-pbconsensuscore-dbgsym Architecture: arm64 Version: 1.1.1+dfsg-8+b1 Binary-Only-Changes: consensuscore (1.1.1+dfsg-8+b1) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for arm64; no source changes. * Rebuild with Python 3.14 as supported . -- arm Build Daemon (arm-ubc-01) Fri, 05 Dec 2025 13:03:52 +0000 Checksums-Md5: 6905764388e4a151bf914c24cc74b94e 464556 libconsensuscore-dev_1.1.1+dfsg-8+b1_arm64.deb 7f93c7a41af0e590e48a3f0ddb6b1c54 16971020 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-8+b1_arm64.deb 42e1610c7a6419851e1ee201adb4ee52 823232 python3-pbconsensuscore_1.1.1+dfsg-8+b1_arm64.deb Checksums-Sha1: 81283c2182e5ae4e71d8711434e9093e43c0fd59 464556 libconsensuscore-dev_1.1.1+dfsg-8+b1_arm64.deb 8e7b9cf814c7e4cc506bb09a092f490c2ebafdd5 16971020 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-8+b1_arm64.deb 77592a94e2373eef10bcc81bfc2dcad56a28f2fd 823232 python3-pbconsensuscore_1.1.1+dfsg-8+b1_arm64.deb Checksums-Sha256: 12d7d9a687d205af42d057de6e0c6fb58ed7a9d5bebc410e6340cb786ee77812 464556 libconsensuscore-dev_1.1.1+dfsg-8+b1_arm64.deb 7501cc5dfee0866679f1cfed9a5ac45831bd3676fb5b936139981661c59bf563 16971020 python3-pbconsensuscore-dbgsym_1.1.1+dfsg-8+b1_arm64.deb afef1341e76e05858ee05df75e22cc027cbca37b87694471f49690f39777cb77 823232 python3-pbconsensuscore_1.1.1+dfsg-8+b1_arm64.deb Build-Origin: Debian Build-Architecture: arm64 Build-Date: Sat, 06 Dec 2025 00:54:53 +0000 Build-Path: /build/reproducible-path/consensuscore-1.1.1+dfsg Installed-Build-Depends: architecture-properties (= 0.2.6), autoconf (= 2.72-3.1), automake (= 1:1.18.1-3), autopoint (= 0.23.2-1), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.8), bash (= 5.3-1), binutils (= 2.45.50.20251201-1), binutils-aarch64-linux-gnu (= 2.45.50.20251201-1), binutils-common (= 2.45.50.20251201-1), bsdextrautils (= 2.41.2-4), build-essential (= 12.12), bzip2 (= 1.0.8-6), coreutils (= 9.7-3), cpp (= 4:15.2.0-4), cpp-15 (= 15.2.0-10), cpp-15-aarch64-linux-gnu (= 15.2.0-10), cpp-aarch64-linux-gnu (= 4:15.2.0-4), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.28), debianutils (= 5.23.2), dh-autoreconf (= 21), dh-exec (= 0.30+b1), dh-python (= 6.20251204.1), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.16-2), file (= 1:5.46-5), findutils (= 4.10.0-3), g++ (= 4:15.2.0-4), g++-15 (= 15.2.0-10), g++-15-aarch64-linux-gnu (= 15.2.0-10), g++-aarch64-linux-gnu (= 4:15.2.0-4), gcc (= 4:15.2.0-4), gcc-15 (= 15.2.0-10), gcc-15-aarch64-linux-gnu (= 15.2.0-10), gcc-15-base (= 15.2.0-10), gcc-aarch64-linux-gnu (= 4:15.2.0-4), gettext (= 0.23.2-1), gettext-base (= 0.23.2-1), grep (= 3.12-1), groff-base (= 1.23.0-10), gzip (= 1.13-1), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 15.2.0-10), libatomic1 (= 15.2.0-10), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libbinutils (= 2.45.50.20251201-1), libblas3 (= 3.12.1-7), libblkid1 (= 2.41.2-4), libboost-dev (= 1.83.0.2+b2), libboost1.83-dev (= 1.83.0-5+b1), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.41-12), libc-dev-bin (= 2.41-12), libc6 (= 2.41-12), libc6-dev (= 2.41-12), libcap-ng0 (= 0.8.5-4+b2), libcap2 (= 1:2.75-10+b2), libcc1-0 (= 15.2.0-10), libcrypt-dev (= 1:4.5.1-1), libcrypt1 (= 1:4.5.1-1), libctf-nobfd0 (= 2.45.50.20251201-1), libctf0 (= 2.45.50.20251201-1), libdb5.3t64 (= 5.3.28+dfsg2-10), libdebconfclient0 (= 0.282), libdebhelper-perl (= 13.28), libdpkg-perl (= 1.22.21), libelf1t64 (= 0.194-1), libexpat1 (= 2.7.3-1), libexpat1-dev (= 2.7.3-1), libffi8 (= 3.5.2-2), libfile-stripnondeterminism-perl (= 1.15.0-1), libgcc-15-dev (= 15.2.0-10), libgcc-s1 (= 15.2.0-10), libgdbm-compat4t64 (= 1.26-1), libgdbm6t64 (= 1.26-1), libgfortran5 (= 15.2.0-10), libgmp10 (= 2:6.3.0+dfsg-5), libgomp1 (= 15.2.0-10), libgprofng0 (= 2.45.50.20251201-1), libhwasan0 (= 15.2.0-10), libisl23 (= 0.27-1), libitm1 (= 15.2.0-10), libjansson4 (= 2.14-2+b3), libjs-sphinxdoc (= 8.2.3-10), liblapack3 (= 3.12.1-7), liblsan0 (= 15.2.0-10), liblzma5 (= 5.8.1-2), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.41.2-4), libmpc3 (= 1.3.1-2), libmpfr6 (= 4.2.2-2), libncursesw6 (= 6.5+20251123-1), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpcre2-8-0 (= 10.46-1), libperl5.40 (= 5.40.1-7), libpipeline1 (= 1.5.8-2), libpython3-all-dev (= 3.13.9-2), libpython3-dev (= 3.13.9-2), libpython3-stdlib (= 3.13.9-2), libpython3.13 (= 3.13.9-1), libpython3.13-dev (= 3.13.9-1), libpython3.13-minimal (= 3.13.9-1), libpython3.13-stdlib (= 3.13.9-1), libpython3.14 (= 3.14.0-5), libpython3.14-dev (= 3.14.0-5), libpython3.14-minimal (= 3.14.0-5), libpython3.14-stdlib (= 3.14.0-5), libreadline8t64 (= 8.3-3), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.9-4+b1), libsframe2 (= 2.45.50.20251201-1), libsimde-dev (= 0.8.2-3), libsmartcols1 (= 2.41.2-4), libsqlite3-0 (= 3.46.1-8), libssl3t64 (= 3.5.4-1), libstdc++-15-dev (= 15.2.0-10), libstdc++6 (= 15.2.0-10), libsystemd0 (= 259~rc2-1), libtinfo6 (= 6.5+20251123-1), libtool (= 2.5.4-7), libtsan2 (= 15.2.0-10), libubsan1 (= 15.2.0-10), libuchardet0 (= 0.0.8-2), libudev1 (= 259~rc2-1), libunistring5 (= 1.3-2), libuuid1 (= 2.41.2-4), libxml2-16 (= 2.15.1+dfsg-2+b1), libzstd1 (= 1.5.7+dfsg-2), linux-libc-dev (= 6.17.10-1), m4 (= 1.4.20-2), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), media-types (= 14.0.0), ncurses-base (= 6.5+20251123-1), ncurses-bin (= 6.5+20251123-1), netbase (= 6.5), openssl-provider-legacy (= 3.5.4-1), patch (= 2.8-2), perl (= 5.40.1-7), perl-base (= 5.40.1-7), perl-modules-5.40 (= 5.40.1-7), po-debconf (= 1.0.21+nmu1), python3 (= 3.13.9-2), python3-all (= 3.13.9-2), python3-all-dev (= 3.13.9-2), python3-autocommand (= 2.2.2-3), python3-dev (= 3.13.9-2), python3-inflect (= 7.5.0-1), python3-jaraco.context (= 6.0.1-1), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-minimal (= 3.13.9-2), python3-more-itertools (= 10.8.0-1), python3-numpy (= 1:2.3.5+ds-2+b1), python3-numpy-dev (= 1:2.3.5+ds-2+b1), python3-pkg-resources (= 78.1.1-0.1), python3-setuptools (= 78.1.1-0.1), python3-typeguard (= 4.4.4-1), python3-typing-extensions (= 4.15.0-1), python3-zipp (= 3.23.0-1), python3.13 (= 3.13.9-1), python3.13-dev (= 3.13.9-1), python3.13-minimal (= 3.13.9-1), python3.14 (= 3.14.0-5), python3.14-dev (= 3.14.0-5), python3.14-minimal (= 3.14.0-5), readline-common (= 8.3-3), rpcsvc-proto (= 1.4.3-1+b1), sed (= 4.9-2+b1), sensible-utils (= 0.0.26), swig (= 4.4.0-1), sysvinit-utils (= 3.15-6), tar (= 1.35+dfsg-3.1), tzdata (= 2025b-5), util-linux (= 2.41.2-4), xz-utils (= 5.8.1-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=8" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1764939832" +------------------------------------------------------------------------------+ | Package contents Sat, 06 Dec 2025 00:54:56 +0000 | +------------------------------------------------------------------------------+ libconsensuscore-dev_1.1.1+dfsg-8+b1_arm64.deb ---------------------------------------------- new Debian package, version 2.0. size 464556 bytes: control archive=2208 bytes. 752 bytes, 17 lines control 4417 bytes, 54 lines md5sums Package: libconsensuscore-dev Source: consensuscore (1.1.1+dfsg-8) Version: 1.1.1+dfsg-8+b1 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 3536 Section: libdevel Priority: optional Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- development files ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. It provides the header files and static library. drwxr-xr-x root/root 0 2025-12-05 13:03 ./ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/include/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/include/ConsensusCore/ drwxr-xr-x root/root 0 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/ -rw-r--r-- root/root 1214 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/AffineAlignment.hpp -rw-r--r-- root/root 775 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/AlignConfig.hpp -rw-r--r-- root/root 565 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/LinearAlignment.hpp -rw-r--r-- root/root 1956 2018-08-14 14:23 ./usr/include/ConsensusCore/Align/PairwiseAlignment.hpp -rw-r--r-- root/root 196 2018-08-14 14:23 ./usr/include/ConsensusCore/Checksum.hpp -rw-r--r-- root/root 653 2018-08-14 14:23 ./usr/include/ConsensusCore/Coverage.hpp drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/include/ConsensusCore/Edna/ -rw-r--r-- root/root 792 2018-08-14 14:23 ./usr/include/ConsensusCore/Edna/EdnaConfig.hpp -rw-r--r-- root/root 513 2018-08-14 14:23 ./usr/include/ConsensusCore/Edna/EdnaCounts.hpp -rw-r--r-- root/root 5876 2025-12-05 13:03 ./usr/include/ConsensusCore/Edna/EdnaEvaluator.hpp -rw-r--r-- root/root 2788 2018-08-14 14:23 ./usr/include/ConsensusCore/Feature.hpp -rw-r--r-- root/root 2051 2018-08-14 14:23 ./usr/include/ConsensusCore/Features.hpp -rw-r--r-- root/root 1517 2018-08-14 14:23 ./usr/include/ConsensusCore/Interval.hpp -rw-r--r-- root/root 838 2025-12-05 13:03 ./usr/include/ConsensusCore/LFloat.hpp -rw-r--r-- root/root 510 2018-08-14 14:23 ./usr/include/ConsensusCore/Logging.hpp drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/include/ConsensusCore/Matrix/ -rw-r--r-- root/root 734 2018-08-14 14:23 ./usr/include/ConsensusCore/Matrix/AbstractMatrix.hpp -rw-r--r-- root/root 3113 2018-08-14 14:23 ./usr/include/ConsensusCore/Matrix/DenseMatrix-inl.hpp -rw-r--r-- root/root 2549 2025-12-05 13:03 ./usr/include/ConsensusCore/Matrix/DenseMatrix.hpp -rw-r--r-- root/root 2697 2018-08-14 14:23 ./usr/include/ConsensusCore/Matrix/SparseMatrix-inl.hpp -rw-r--r-- root/root 1918 2025-12-05 13:03 ./usr/include/ConsensusCore/Matrix/SparseMatrix.hpp -rw-r--r-- root/root 5885 2018-08-14 14:23 ./usr/include/ConsensusCore/Matrix/SparseVector-inl.hpp -rw-r--r-- root/root 1619 2025-12-05 13:03 ./usr/include/ConsensusCore/Matrix/SparseVector.hpp -rw-r--r-- root/root 1812 2018-08-14 14:23 ./usr/include/ConsensusCore/Matrix/VectorL.hpp -rw-r--r-- root/root 2663 2018-08-14 14:23 ./usr/include/ConsensusCore/Mutation-inl.hpp -rw-r--r-- root/root 2399 2018-08-14 14:23 ./usr/include/ConsensusCore/Mutation.hpp drwxr-xr-x root/root 0 2018-08-14 14:23 ./usr/include/ConsensusCore/Poa/ -rw-r--r-- root/root 1801 2018-08-14 14:23 ./usr/include/ConsensusCore/Poa/PoaConsensus.hpp -rw-r--r-- root/root 1915 2018-08-14 14:23 ./usr/include/ConsensusCore/Poa/PoaGraph.hpp -rw-r--r-- root/root 1555 2018-08-14 14:23 ./usr/include/ConsensusCore/Poa/RangeFinder.hpp drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/include/ConsensusCore/Quiver/ -rw-r--r-- root/root 531 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/Diploid.hpp -rw-r--r-- root/root 7338 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MultiReadMutationScorer.hpp -rw-r--r-- root/root 1178 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationEnumerator-inl.hpp -rw-r--r-- root/root 1776 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationEnumerator.hpp -rw-r--r-- root/root 1924 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/MutationScorer.hpp -rw-r--r-- root/root 5260 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/QuiverConfig.hpp -rw-r--r-- root/root 933 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/QuiverConsensus.hpp -rw-r--r-- root/root 6723 2025-12-05 13:03 ./usr/include/ConsensusCore/Quiver/QvEvaluator.hpp -rw-r--r-- root/root 773 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/ReadScorer.hpp -rw-r--r-- root/root 1474 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/SimpleRecursor.hpp -rw-r--r-- root/root 1771 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/SseRecursor.hpp drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/include/ConsensusCore/Quiver/detail/ -rw-r--r-- root/root 856 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/detail/Combiner.hpp -rw-r--r-- root/root 1715 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/detail/RecursorBase-inl.hpp -rw-r--r-- root/root 2535 2018-08-14 14:23 ./usr/include/ConsensusCore/Quiver/detail/RecursorBase.hpp -rw-r--r-- root/root 1306 2025-12-05 13:03 ./usr/include/ConsensusCore/Quiver/detail/SseMath.hpp -rw-r--r-- root/root 29211 2025-12-05 13:03 ./usr/include/ConsensusCore/Quiver/detail/sse_mathfun.h -rw-r--r-- root/root 891 2018-08-14 14:23 ./usr/include/ConsensusCore/Read.hpp -rw-r--r-- root/root 278 2018-08-14 14:23 ./usr/include/ConsensusCore/Sequence.hpp drwxr-xr-x root/root 0 2018-08-14 14:23 ./usr/include/ConsensusCore/Statistics/ -rw-r--r-- root/root 378 2018-08-14 14:23 ./usr/include/ConsensusCore/Statistics/Binomial.hpp -rw-r--r-- root/root 2483 2018-08-14 14:23 ./usr/include/ConsensusCore/Types.hpp -rw-r--r-- root/root 1093 2018-08-14 14:23 ./usr/include/ConsensusCore/Utils.hpp -rw-r--r-- root/root 433 2018-08-14 14:23 ./usr/include/ConsensusCore/Version.hpp drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/aarch64-linux-gnu/ -rw-r--r-- root/root 3448260 2025-12-05 13:03 ./usr/lib/aarch64-linux-gnu/libConsensusCore.a drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/share/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/share/doc/libconsensuscore-dev/ -rw-r--r-- root/root 231 2025-12-05 13:03 ./usr/share/doc/libconsensuscore-dev/changelog.Debian.arm64.gz -rw-r--r-- root/root 1050 2025-12-05 13:03 ./usr/share/doc/libconsensuscore-dev/changelog.Debian.gz -rw-r--r-- root/root 420 2018-08-14 14:23 ./usr/share/doc/libconsensuscore-dev/changelog.gz -rw-r--r-- root/root 5866 2025-04-21 11:18 ./usr/share/doc/libconsensuscore-dev/copyright python3-pbconsensuscore-dbgsym_1.1.1+dfsg-8+b1_arm64.deb -------------------------------------------------------- new Debian package, version 2.0. size 16971020 bytes: control archive=660 bytes. 498 bytes, 12 lines control 313 bytes, 3 lines md5sums Package: python3-pbconsensuscore-dbgsym Source: consensuscore (1.1.1+dfsg-8) Version: 1.1.1+dfsg-8+b1 Auto-Built-Package: debug-symbols Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 23200 Depends: python3-pbconsensuscore (= 1.1.1+dfsg-8+b1) Section: debug Priority: optional Description: debug symbols for python3-pbconsensuscore Build-Ids: a76998db15fb9614000aa18311ffc9e2716b68f0 da08d8085aafc184e1c547195e3c249261510f61 drwxr-xr-x root/root 0 2025-12-05 13:03 ./ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/debug/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/debug/.build-id/a7/ -rw-r--r-- root/root 10988536 2025-12-05 13:03 ./usr/lib/debug/.build-id/a7/6998db15fb9614000aa18311ffc9e2716b68f0.debug drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/debug/.build-id/da/ -rw-r--r-- root/root 10984512 2025-12-05 13:03 ./usr/lib/debug/.build-id/da/08d8085aafc184e1c547195e3c249261510f61.debug drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/debug/.dwz/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/debug/.dwz/aarch64-linux-gnu/ -rw-r--r-- root/root 1768560 2025-12-05 13:03 ./usr/lib/debug/.dwz/aarch64-linux-gnu/python3-pbconsensuscore.debug drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/share/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/share/doc/ lrwxrwxrwx root/root 0 2025-12-05 13:03 ./usr/share/doc/python3-pbconsensuscore-dbgsym -> python3-pbconsensuscore python3-pbconsensuscore_1.1.1+dfsg-8+b1_arm64.deb ------------------------------------------------- new Debian package, version 2.0. size 823232 bytes: control archive=1444 bytes. 890 bytes, 18 lines control 985 bytes, 10 lines md5sums 293 bytes, 12 lines * postinst #!/bin/sh 439 bytes, 12 lines * prerm #!/bin/sh Package: python3-pbconsensuscore Source: consensuscore (1.1.1+dfsg-8) Version: 1.1.1+dfsg-8+b1 Architecture: arm64 Maintainer: Debian Med Packaging Team Installed-Size: 6046 Depends: libc6 (>= 2.29), libgcc-s1 (>= 4.5), libstdc++6 (>= 13.1), python3 (<< 3.15), python3 (>= 3.13~), python3-numpy2-abi0 | python3-numpy-abi9, python3:any Section: python Priority: optional Homepage: https://github.com/PacificBiosciences/ConsensusCore Description: algorithms for PacBio multiple sequence consensus -- Python 3 ConsensusCore is a library of C++ algorithms for Pacific Biosciences multiple sequence consensus that powers Quiver (Python) and ConsensusTools (.NET). This library primarily exists as the backend for GenomicConsensus, which implements Quiver. . This package is part of the SMRT Analysis suite. It provides the Python3 bindings. drwxr-xr-x root/root 0 2025-12-05 13:03 ./ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/python3/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/python3/dist-packages/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/ -rw-r--r-- root/root 2354 2025-12-05 13:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/PKG-INFO -rw-r--r-- root/root 1 2025-12-05 13:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/dependency_links.txt -rw-r--r-- root/root 15 2025-12-05 13:03 ./usr/lib/python3/dist-packages/ConsensusCore-1.0.2.egg-info/top_level.txt -rw-r--r-- root/root 486 2025-12-05 13:03 ./usr/lib/python3/dist-packages/ConsensusCore.py -rw-r--r-- root/root 3080416 2025-12-05 13:03 ./usr/lib/python3/dist-packages/_ConsensusCore.cpython-313-aarch64-linux-gnu.so -rw-r--r-- root/root 3080416 2025-12-05 13:03 ./usr/lib/python3/dist-packages/_ConsensusCore.cpython-314-aarch64-linux-gnu.so drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/share/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-12-05 13:03 ./usr/share/doc/python3-pbconsensuscore/ -rw-r--r-- root/root 231 2025-12-05 13:03 ./usr/share/doc/python3-pbconsensuscore/changelog.Debian.arm64.gz -rw-r--r-- root/root 1049 2025-12-05 13:03 ./usr/share/doc/python3-pbconsensuscore/changelog.Debian.gz -rw-r--r-- root/root 420 2018-08-14 14:23 ./usr/share/doc/python3-pbconsensuscore/changelog.gz -rw-r--r-- root/root 5866 2025-04-21 11:18 ./usr/share/doc/python3-pbconsensuscore/copyright +------------------------------------------------------------------------------+ | Post Build Sat, 06 Dec 2025 00:55:00 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Sat, 06 Dec 2025 00:55:00 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Sat, 06 Dec 2025 00:55:03 +0000 | +------------------------------------------------------------------------------+ Build Architecture: arm64 Build Type: any Build-Space: 284576 Build-Time: 661 Distribution: unstable Host Architecture: arm64 Install-Time: 6 Job: /srv/rebuilderd/tmp/rebuilderdJFhIUF/inputs/consensuscore_1.1.1+dfsg-8.dsc Machine Architecture: arm64 Package: consensuscore Package-Time: 685 Source-Version: 1.1.1+dfsg-8 Space: 284576 Status: successful Version: 1.1.1+dfsg-8+b1 -------------------------------------------------------------------------------- Finished at 2025-12-06T00:54:53Z Build needed 00:11:25, 284576k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdJFhIUF/out size differs for libconsensuscore-dev_1.1.1+dfsg-8+b1_arm64.deb checking libconsensuscore-dev_1.1.1+dfsg-8+b1_arm64.deb: