=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdQws567/inputs/r-base_4.5.0-3_armhf.buildinfo Source: r-base Version: 4.5.0-3 rebuilderd-worker node: codethink01-arm64 +------------------------------------------------------------------------------+ | Downloading sources Mon, 21 Jul 2025 15:17:30 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [168 kB] Get:2 https://deb.debian.org/debian sid InRelease [213 kB] Get:3 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:4 https://deb.debian.org/debian sid/main Sources [11.0 MB] Fetched 21.9 MB in 3s (8635 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.0-3.dsc' r-base_4.5.0-3.dsc 2906 SHA256:5c62f851115924872d7d057b16f1a50d61bd02917751d99d33013cb82e6f9967 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.0.orig.tar.gz' r-base_4.5.0.orig.tar.gz 40466335 SHA256:3b33ea113e0d1ddc9793874d5949cec2c7386f66e4abfb1cef9aec22846c3ce1 'https://deb.debian.org/debian/pool/main/r/r-base/r-base_4.5.0-3.debian.tar.xz' r-base_4.5.0-3.debian.tar.xz 100824 SHA256:acbde33497a5ebffb529d91dd09e98d833c4cd46b8bbbda13143b1e34bc83d4d 3b33ea113e0d1ddc9793874d5949cec2c7386f66e4abfb1cef9aec22846c3ce1 r-base_4.5.0.orig.tar.gz acbde33497a5ebffb529d91dd09e98d833c4cd46b8bbbda13143b1e34bc83d4d r-base_4.5.0-3.debian.tar.xz 5c62f851115924872d7d057b16f1a50d61bd02917751d99d33013cb82e6f9967 r-base_4.5.0-3.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Mon, 21 Jul 2025 15:17:36 +0000 | +------------------------------------------------------------------------------+ Rebuilding r-base=4.5.0-3 in /srv/rebuilderd/tmp/rebuilderdQws567/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdQws567/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdQws567/inputs/r-base_4.5.0-3_armhf.buildinfo /srv/rebuilderd/tmp/rebuilderdQws567/inputs/r-base_4.5.0-3_armhf.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/r-base-4.5.0 I: verifying dsc... successful! Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie InRelease [175 kB] Get:2 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf Packages [9251 kB] Fetched 9427 kB in 1s (9374 kB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20250509T030417Z/dists/trixie/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libblas-dev armhf 3.12.1-2 [127 kB] Fetched 127 kB in 0s (4669 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvlrvrso5/libblas-dev_3.12.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf media-types all 13.0.0 [29.3 kB] Fetched 29.3 kB in 0s (1783 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmi6bjwxu/media-types_13.0.0_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxi6 armhf 2:1.8.2-1 [73.6 kB] Fetched 73.6 kB in 0s (4361 kB/s) dpkg-name: info: moved 'libxi6_2%3a1.8.2-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpg4lsogb9/libxi6_1.8.2-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpixman-1-0 armhf 0.44.0-3 [164 kB] Fetched 164 kB in 0s (10.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbvxbulia/libpixman-1-0_0.44.0-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libkeyutils1 armhf 1.6.3-6 [8568 B] Fetched 8568 B in 0s (559 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpamgudxyf/libkeyutils1_1.6.3-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gtk-update-icon-cache armhf 4.18.4+ds-2 [50.5 kB] Fetched 50.5 kB in 0s (3014 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9bitcvn8/gtk-update-icon-cache_4.18.4+ds-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texlive-fonts-extra all 2024.20250309-2 [624 MB] Fetched 624 MB in 2s (250 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0m87wlmi/texlive-fonts-extra_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf tex-common all 6.19 [29.4 kB] Fetched 29.4 kB in 0s (1615 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnijwqk6t/tex-common_6.19_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpam-runtime all 1.7.0-3 [248 kB] Fetched 248 kB in 0s (12.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppcsryl7l/libpam-runtime_1.7.0-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libevent-2.1-7t64 armhf 2.1.12-stable-10+b1 [164 kB] Fetched 164 kB in 0s (8980 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpezdlayek/libevent-2.1-7t64_2.1.12-stable-10+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libbsd0 armhf 0.12.2-2 [127 kB] Fetched 127 kB in 0s (8355 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppr0x0xwp/libbsd0_0.12.2-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gir1.2-freedesktop armhf 1.84.0-1 [60.5 kB] Fetched 60.5 kB in 0s (4007 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpud68ixwu/gir1.2-freedesktop_1.84.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf groff-base armhf 1.23.0-7 [1095 kB] Fetched 1095 kB in 0s (42.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp36qaa1rh/groff-base_1.23.0-7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcap2 armhf 1:2.75-7 [24.1 kB] Fetched 24.1 kB in 0s (0 B/s) dpkg-name: info: moved 'libcap2_1%3a2.75-7_armhf.deb' to '/srv/rebuilderd/tmp/tmpfzwy2ccv/libcap2_2.75-7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libnghttp3-dev armhf 1.8.0-1 [84.8 kB] Fetched 84.8 kB in 0s (4963 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzx00bc4f/libnghttp3-dev_1.8.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxss-dev armhf 1:1.2.3-1+b3 [22.2 kB] Fetched 22.2 kB in 0s (1524 kB/s) dpkg-name: info: moved 'libxss-dev_1%3a1.2.3-1+b3_armhf.deb' to '/srv/rebuilderd/tmp/tmp_2p3rau_/libxss-dev_1.2.3-1+b3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf file armhf 1:5.46-5 [42.8 kB] Fetched 42.8 kB in 0s (2891 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_armhf.deb' to '/srv/rebuilderd/tmp/tmp4p0uat7t/file_5.46-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libasound2-data all 1.2.14-1 [21.1 kB] Fetched 21.1 kB in 0s (1297 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8t7qro07/libasound2-data_1.2.14-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf cpp-arm-linux-gnueabihf armhf 4:14.2.0-1 [4844 B] Fetched 4844 B in 0s (314 kB/s) dpkg-name: info: moved 'cpp-arm-linux-gnueabihf_4%3a14.2.0-1_armhf.deb' to '/srv/rebuilderd/tmp/tmp8ytt23nj/cpp-arm-linux-gnueabihf_14.2.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxau6 armhf 1:1.0.11-1 [19.7 kB] Fetched 19.7 kB in 0s (1126 kB/s) dpkg-name: info: moved 'libxau6_1%3a1.0.11-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpc1quj16y/libxau6_1.0.11-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libwebp-dev armhf 1.5.0-0.1 [397 kB] Fetched 397 kB in 0s (20.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv9e7wkv1/libwebp-dev_1.5.0-0.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gcc armhf 4:14.2.0-1 [5140 B] Fetched 5140 B in 0s (314 kB/s) dpkg-name: info: moved 'gcc_4%3a14.2.0-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpcr6a4d_l/gcc_14.2.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcairo-script-interpreter2 armhf 1.18.4-1+b1 [50.3 kB] Fetched 50.3 kB in 0s (2934 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaou7xpn0/libcairo-script-interpreter2_1.18.4-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdeflate0 armhf 1.23-2 [36.5 kB] Fetched 36.5 kB in 0s (2148 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnkhp5wxy/libdeflate0_1.23-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdebhelper-perl all 13.24.2 [90.9 kB] Fetched 90.9 kB in 0s (5231 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyf35akvc/libdebhelper-perl_13.24.2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf mount armhf 2.41-4 [150 kB] Fetched 150 kB in 0s (9623 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprjvnzm6c/mount_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpng-dev armhf 1.6.47-1.1 [349 kB] Fetched 349 kB in 0s (17.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9tqrnneh/libpng-dev_1.6.47-1.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxml-namespacesupport-perl all 1.12-2 [15.1 kB] Fetched 15.1 kB in 0s (893 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr8jyu9lq/libxml-namespacesupport-perl_1.12-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf icu-devtools armhf 76.1-3 [191 kB] Fetched 191 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyn59r3ie/icu-devtools_76.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsepol2 armhf 3.8.1-1 [256 kB] Fetched 256 kB in 0s (15.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj4ztwied/libsepol2_3.8.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcommons-logging-java all 1.3.0-1 [68.6 kB] Fetched 68.6 kB in 0s (3934 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa2idjh43/libcommons-logging-java_1.3.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgomp1 armhf 14.2.0-19 [111 kB] Fetched 111 kB in 0s (6404 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2dv_exfy/libgomp1_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf liblapack3 armhf 3.12.1-2 [1835 kB] Fetched 1835 kB in 0s (57.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp04rfjmfe/liblapack3_3.12.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libunicode-linebreak-perl armhf 0.0.20190101-1+b9 [93.6 kB] Fetched 93.6 kB in 0s (4251 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf1fctg9f/libunicode-linebreak-perl_0.0.20190101-1+b9_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf native-architecture all 0.2.6 [2264 B] Fetched 2264 B in 0s (133 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps_6iky4j/native-architecture_0.2.6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texinfo all 7.1.1-1 [1753 kB] Fetched 1753 kB in 0s (54.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0hab167s/texinfo_7.1.1-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf openjdk-21-jdk armhf 21.0.7+6-1 [3578 kB] Fetched 3578 kB in 0s (76.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpky19v_ed/openjdk-21-jdk_21.0.7+6-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libx11-xcb1 armhf 2:1.8.12-1 [247 kB] Fetched 247 kB in 0s (13.1 MB/s) dpkg-name: info: moved 'libx11-xcb1_2%3a1.8.12-1_armhf.deb' to '/srv/rebuilderd/tmp/tmppsc4ovs3/libx11-xcb1_1.8.12-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsqlite3-0 armhf 3.46.1-3 [803 kB] Fetched 803 kB in 0s (35.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3tixrqvq/libsqlite3-0_3.46.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf x11-common all 1:7.7+24 [217 kB] Fetched 217 kB in 0s (11.6 MB/s) dpkg-name: info: moved 'x11-common_1%3a7.7+24_all.deb' to '/srv/rebuilderd/tmp/tmp6g8fbyuj/x11-common_7.7+24_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf debhelper all 13.24.2 [919 kB] Fetched 919 kB in 0s (37.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwsh2dkbw/debhelper_13.24.2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dh-autoreconf all 20 [17.1 kB] Fetched 17.1 kB in 0s (1040 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwlxhidu3/dh-autoreconf_20_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpangoxft-1.0-0 armhf 1.56.3-1 [25.4 kB] Fetched 25.4 kB in 0s (1465 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjxnq58gk/libpangoxft-1.0-0_1.56.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgnutls28-dev armhf 3.8.9-2 [1337 kB] Fetched 1337 kB in 0s (45.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj1p6x5u5/libgnutls28-dev_3.8.9-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gcc-14 armhf 14.2.0-19 [509 kB] Fetched 509 kB in 0s (30.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3inafoq6/gcc-14_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb-xfixes0 armhf 1.17.0-2+b1 [109 kB] Fetched 109 kB in 0s (7056 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk4bykpd0/libxcb-xfixes0_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxt6t64 armhf 1:1.2.1-1.2+b2 [160 kB] Fetched 160 kB in 0s (4269 kB/s) dpkg-name: info: moved 'libxt6t64_1%3a1.2.1-1.2+b2_armhf.deb' to '/srv/rebuilderd/tmp/tmp9_v4g_kx/libxt6t64_1.2.1-1.2+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf systemd-sysv armhf 257.5-2 [63.9 kB] Fetched 63.9 kB in 0s (3686 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3j15t2se/systemd-sysv_257.5-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgcc-14-dev armhf 14.2.0-19 [768 kB] Fetched 768 kB in 0s (45.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu5uqj5gi/libgcc-14-dev_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libuuid1 armhf 2.41-4 [36.4 kB] Fetched 36.4 kB in 0s (2178 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwm7o5j2e/libuuid1_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libmpfr6 armhf 4.2.2-1 [605 kB] Fetched 605 kB in 0s (23.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpic0q0j0b/libmpfr6_4.2.2-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf librtmp-dev armhf 2.4+20151223.gitfa8646d.1-2+b5 [63.6 kB] Fetched 63.6 kB in 0s (4084 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf1touqhn/librtmp-dev_2.4+20151223.gitfa8646d.1-2+b5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gfortran-14-arm-linux-gnueabihf armhf 14.2.0-19 [8722 kB] Fetched 8722 kB in 0s (181 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvpfnn8x7/gfortran-14-arm-linux-gnueabihf_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libbz2-dev armhf 1.0.8-6 [28.7 kB] Fetched 28.7 kB in 0s (1743 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmpmy1urq/libbz2-dev_1.0.8-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxft-dev armhf 2.3.6-1+b4 [65.8 kB] Fetched 65.8 kB in 0s (4296 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqw3u_t8_/libxft-dev_2.3.6-1+b4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libatspi2.0-0t64 armhf 2.56.2-1 [69.6 kB] Fetched 69.6 kB in 0s (4494 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppw7qj554/libatspi2.0-0t64_2.56.2-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libice-dev armhf 2:1.1.1-1 [69.0 kB] Fetched 69.0 kB in 0s (4306 kB/s) dpkg-name: info: moved 'libice-dev_2%3a1.1.1-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpttdabnhn/libice-dev_1.1.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libkadm5clnt-mit12 armhf 1.21.3-5 [37.7 kB] Fetched 37.7 kB in 0s (2078 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpygfauhlg/libkadm5clnt-mit12_1.21.3-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf mpack armhf 1.6-18+b2 [33.5 kB] Fetched 33.5 kB in 0s (903 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoo4hvwjh/mpack_1.6-18+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libaudit1 armhf 1:4.0.2-2+b2 [49.2 kB] Fetched 49.2 kB in 0s (2868 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.0.2-2+b2_armhf.deb' to '/srv/rebuilderd/tmp/tmpcclnyvb0/libaudit1_4.0.2-2+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf make armhf 4.4.1-2 [449 kB] Fetched 449 kB in 0s (21.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptl7kxs1p/make_4.4.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libglib2.0-data all 2.84.1-2 [1284 kB] Fetched 1284 kB in 0s (49.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp40y2qiub/libglib2.0-data_2.84.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf default-jdk armhf 2:1.21-76 [1076 B] Fetched 1076 B in 0s (72.5 kB/s) dpkg-name: info: moved 'default-jdk_2%3a1.21-76_armhf.deb' to '/srv/rebuilderd/tmp/tmpc4cpr77q/default-jdk_1.21-76_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf g++ armhf 4:14.2.0-1 [1324 B] Fetched 1324 B in 0s (91.3 kB/s) dpkg-name: info: moved 'g++_4%3a14.2.0-1_armhf.deb' to '/srv/rebuilderd/tmp/tmphlqorfv4/g++_14.2.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf ucf all 3.0051 [42.8 kB] Fetched 42.8 kB in 0s (2802 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0czw0gb1/ucf_3.0051_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxext-dev armhf 2:1.3.4-1+b3 [100 kB] Fetched 100 kB in 0s (6737 kB/s) dpkg-name: info: moved 'libxext-dev_2%3a1.3.4-1+b3_armhf.deb' to '/srv/rebuilderd/tmp/tmp2sascphh/libxext-dev_1.3.4-1+b3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf fonts-dejavu-mono all 2.37-8 [489 kB] Fetched 489 kB in 0s (30.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj6yqltih/fonts-dejavu-mono_2.37-8_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcairo2-dev armhf 1.18.4-1+b1 [43.4 kB] Fetched 43.4 kB in 0s (2752 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpue5imie4/libcairo2-dev_1.18.4-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtexlua53-5 armhf 2024.20240313.70630+ds-6 [83.1 kB] Fetched 83.1 kB in 0s (4994 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptdp54b08/libtexlua53-5_2024.20240313.70630+ds-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgbm1 armhf 25.0.4-1 [40.3 kB] Fetched 40.3 kB in 0s (3615 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8bwncop1/libgbm1_25.0.4-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxdamage1 armhf 1:1.1.6-1+b2 [14.8 kB] Fetched 14.8 kB in 0s (1060 kB/s) dpkg-name: info: moved 'libxdamage1_1%3a1.1.6-1+b2_armhf.deb' to '/srv/rebuilderd/tmp/tmpi8onv18a/libxdamage1_1.1.6-1+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf bison armhf 2:3.8.2+dfsg-1+b2 [1138 kB] Fetched 1138 kB in 0s (63.2 MB/s) dpkg-name: info: moved 'bison_2%3a3.8.2+dfsg-1+b2_armhf.deb' to '/srv/rebuilderd/tmp/tmp0iny53sp/bison_3.8.2+dfsg-1+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb-render0-dev armhf 1.17.0-2+b1 [118 kB] Fetched 118 kB in 0s (2574 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpldj7vog5/libxcb-render0-dev_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (798 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqgdovlil/netbase_6.5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Fetched 248 kB in 0s (18.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4oht9_sb/po-debconf_1.0.21+nmu1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (33.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpij8g2fom/autoconf_2.72-3.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gcc-arm-linux-gnueabihf armhf 4:14.2.0-1 [1440 B] Fetched 1440 B in 0s (0 B/s) dpkg-name: info: moved 'gcc-arm-linux-gnueabihf_4%3a14.2.0-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpgh5wq6_a/gcc-arm-linux-gnueabihf_14.2.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgfortran5 armhf 14.2.0-19 [263 kB] Fetched 263 kB in 0s (11.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwjm2ziqk/libgfortran5_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxtst6 armhf 2:1.2.5-1 [24.1 kB] Fetched 24.1 kB in 0s (1764 kB/s) dpkg-name: info: moved 'libxtst6_2%3a1.2.5-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpgz7v1d2y/libxtst6_1.2.5-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libblkid1 armhf 2.41-4 [155 kB] Fetched 155 kB in 0s (8695 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp88f15rut/libblkid1_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgfortran-14-dev armhf 14.2.0-19 [315 kB] Fetched 315 kB in 0s (14.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkm51re9p/libgfortran-14-dev_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf pkgconf armhf 1.8.1-4 [26.1 kB] Fetched 26.1 kB in 0s (2158 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_bm7bd92/pkgconf_1.8.1-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcurl4-openssl-dev armhf 8.13.0-5 [457 kB] Fetched 457 kB in 0s (28.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyy5bakg8/libcurl4-openssl-dev_8.13.0-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libssl3t64 armhf 3.5.0-1 [1979 kB] Fetched 1979 kB in 0s (92.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmt4l_cyy/libssl3t64_3.5.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libicu-dev armhf 76.1-3 [10.5 MB] Fetched 10.5 MB in 0s (115 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2ih_juna/libicu-dev_76.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libkpathsea6 armhf 2024.20240313.70630+ds-6 [147 kB] Fetched 147 kB in 0s (14.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprrnu2vsb/libkpathsea6_2024.20240313.70630+ds-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf openjdk-21-jre armhf 21.0.7+6-1 [181 kB] Fetched 181 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpomli7lym/openjdk-21-jre_21.0.7+6-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpython3.13-stdlib armhf 3.13.3-2 [1828 kB] Fetched 1828 kB in 0s (86.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeu9weu2t/libpython3.13-stdlib_3.13.3-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libavahi-client3 armhf 0.8-16 [44.6 kB] Fetched 44.6 kB in 0s (2665 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplt6udtvw/libavahi-client3_0.8-16_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxml-sax-perl all 1.02+dfsg-4 [53.4 kB] Fetched 53.4 kB in 0s (2931 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ax5tlj9/libxml-sax-perl_1.02+dfsg-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf sensible-utils all 0.0.25 [25.0 kB] Fetched 25.0 kB in 0s (1393 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcm587sn5/sensible-utils_0.0.25_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsynctex2 armhf 2024.20240313.70630+ds-6 [49.4 kB] Fetched 49.4 kB in 0s (2751 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4iw_ve1i/libsynctex2_2024.20240313.70630+ds-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libjpeg62-turbo-dev armhf 1:2.1.5-3.1 [262 kB] Fetched 262 kB in 0s (13.6 MB/s) dpkg-name: info: moved 'libjpeg62-turbo-dev_1%3a2.1.5-3.1_armhf.deb' to '/srv/rebuilderd/tmp/tmpe5p25fud/libjpeg62-turbo-dev_2.1.5-3.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgnutls30t64 armhf 3.8.9-2 [1382 kB] Fetched 1382 kB in 0s (67.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk_n8v0r1/libgnutls30t64_3.8.9-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf fontconfig armhf 2.15.0-2.3 [462 kB] Fetched 462 kB in 0s (22.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwrx_a9u3/fontconfig_2.15.0-2.3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcairo2 armhf 1.18.4-1+b1 [443 kB] Fetched 443 kB in 0s (21.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbglhcn8b/libcairo2_1.18.4-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libedit2 armhf 3.1-20250104-1 [78.0 kB] Fetched 78.0 kB in 0s (4495 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb9312l6m/libedit2_3.1-20250104-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgraphite2-dev armhf 1.3.14-2+b1 [20.3 kB] Fetched 20.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps5p32iva/libgraphite2-dev_1.3.14-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libnettle8t64 armhf 3.10.1-1 [312 kB] Fetched 312 kB in 0s (16.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmc3ezzff/libnettle8t64_3.10.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgdk-pixbuf-2.0-0 armhf 2.42.12+dfsg-2 [126 kB] Fetched 126 kB in 0s (8436 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd9rl4mt7/libgdk-pixbuf-2.0-0_2.42.12+dfsg-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libicu76 armhf 76.1-3 [9368 kB] Fetched 9368 kB in 0s (180 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp35rhk0jt/libicu76_76.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libkdb5-10t64 armhf 1.21.3-5 [37.6 kB] Fetched 37.6 kB in 0s (2478 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfj9pzjlq/libkdb5-10t64_1.21.3-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfontbox-java all 1:1.8.16-5 [211 kB] Fetched 211 kB in 0s (11.7 MB/s) dpkg-name: info: moved 'libfontbox-java_1%3a1.8.16-5_all.deb' to '/srv/rebuilderd/tmp/tmpvyu9rx_i/libfontbox-java_1.8.16-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf zlib1g armhf 1:1.3.dfsg+really1.3.1-1+b1 [75.2 kB] Fetched 75.2 kB in 0s (4886 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_armhf.deb' to '/srv/rebuilderd/tmp/tmp5x02_bm2/zlib1g_1.3.dfsg+really1.3.1-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf readline-common all 8.2-6 [69.4 kB] Fetched 69.4 kB in 0s (4657 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpitsc6xil/readline-common_8.2-6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpangocairo-1.0-0 armhf 1.56.3-1 [31.6 kB] Fetched 31.6 kB in 0s (1898 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjbsndw7n/libpangocairo-1.0-0_1.56.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxxf86vm1 armhf 1:1.1.4-1+b4 [18.2 kB] Fetched 18.2 kB in 0s (1223 kB/s) dpkg-name: info: moved 'libxxf86vm1_1%3a1.1.4-1+b4_armhf.deb' to '/srv/rebuilderd/tmp/tmpkqwa_nro/libxxf86vm1_1.1.4-1+b4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb-shm0-dev armhf 1.17.0-2+b1 [108 kB] Fetched 108 kB in 0s (6865 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpksoy4rz5/libxcb-shm0-dev_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgraphite2-3 armhf 1.3.14-2+b1 [63.1 kB] Fetched 63.1 kB in 0s (4055 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyl7m0l6i/libgraphite2-3_1.3.14-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxfont2 armhf 1:2.0.6-1+b3 [116 kB] Fetched 116 kB in 0s (7401 kB/s) dpkg-name: info: moved 'libxfont2_1%3a2.0.6-1+b3_armhf.deb' to '/srv/rebuilderd/tmp/tmp5fn3ien6/libxfont2_2.0.6-1+b3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Fetched 22.1 kB in 0s (1487 kB/s) dpkg-name: info: moved 'xorg-sgml-doctools_1%3a1.11-1.1_all.deb' to '/srv/rebuilderd/tmp/tmp90pawl0d/xorg-sgml-doctools_1.11-1.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libmime-charset-perl all 1.013.1-2 [34.0 kB] Fetched 34.0 kB in 0s (2370 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ztbq9_m/libmime-charset-perl_1.013.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf base-passwd armhf 3.6.7 [52.5 kB] Fetched 52.5 kB in 0s (3562 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpesqq1e1k/base-passwd_3.6.7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf python3.13-minimal armhf 3.13.3-2 [1844 kB] dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0azjaj8c/python3.13-minimal_3.13.3-2_armhf.deb' Fetched 1844 kB in 0s (57.6 MB/s) Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf coreutils armhf 9.7-2 [2867 kB] Fetched 2867 kB in 0s (70.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqn54h2g1/coreutils_9.7-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libc-bin armhf 2.41-7 [522 kB] Fetched 522 kB in 0s (36.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc_ri9gj9/libc-bin_2.41-7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf findutils armhf 4.10.0-3 [687 kB] Fetched 687 kB in 0s (60.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplvx5es3l/findutils_4.10.0-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gir1.2-harfbuzz-0.0 armhf 10.2.0-1+b1 [42.3 kB] Fetched 42.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpks5kftaq/gir1.2-harfbuzz-0.0_10.2.0-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libkrb5-3 armhf 1.21.3-5 [284 kB] Fetched 284 kB in 0s (11.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5l01wl5r/libkrb5-3_1.21.3-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dash armhf 0.5.12-12 [90.4 kB] Fetched 90.4 kB in 0s (6801 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp1smpvr1/dash_0.5.12-12_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libglib2.0-dev-bin armhf 2.84.1-2 [53.0 kB] Fetched 53.0 kB in 0s (3356 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpia46_0b6/libglib2.0-dev-bin_2.84.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb1 armhf 1.17.0-2+b1 [140 kB] Fetched 140 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwb0rjr0d/libxcb1_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtk8.6 armhf 8.6.16-1 [698 kB] Fetched 698 kB in 0s (33.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk7j8crl1/libtk8.6_8.6.16-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libblkid-dev armhf 2.41-4 [197 kB] Fetched 197 kB in 0s (10.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpogli04nw/libblkid-dev_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcap-ng0 armhf 0.8.5-4+b1 [16.1 kB] Fetched 16.1 kB in 0s (885 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptjaarahn/libcap-ng0_0.8.5-4+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfile-homedir-perl all 1.006-2 [42.4 kB] Fetched 42.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0ag_0s75/libfile-homedir-perl_1.006-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxss1 armhf 1:1.2.3-1+b3 [16.4 kB] Fetched 16.4 kB in 0s (975 kB/s) dpkg-name: info: moved 'libxss1_1%3a1.2.3-1+b3_armhf.deb' to '/srv/rebuilderd/tmp/tmp5dq40jd4/libxss1_1.2.3-1+b3_armhf.deb' Downloading dependency 1 of 515: libblas-dev:armhf=3.12.1-2 Downloading dependency 2 of 515: media-types:armhf=13.0.0 Downloading dependency 3 of 515: libxi6:armhf=2:1.8.2-1 Downloading dependency 4 of 515: libpixman-1-0:armhf=0.44.0-3 Downloading dependency 5 of 515: libkeyutils1:armhf=1.6.3-6 Downloading dependency 6 of 515: gtk-update-icon-cache:armhf=4.18.4+ds-2 Downloading dependency 7 of 515: texlive-fonts-extra:armhf=2024.20250309-2 Downloading dependency 8 of 515: tex-common:armhf=6.19 Downloading dependency 9 of 515: libpam-runtime:armhf=1.7.0-3 Downloading dependency 10 of 515: libevent-2.1-7t64:armhf=2.1.12-stable-10+b1 Downloading dependency 11 of 515: libbsd0:armhf=0.12.2-2 Downloading dependency 12 of 515: gir1.2-freedesktop:armhf=1.84.0-1 Downloading dependency 13 of 515: groff-base:armhf=1.23.0-7 Downloading dependency 14 of 515: libcap2:armhf=1:2.75-7 Downloading dependency 15 of 515: libnghttp3-dev:armhf=1.8.0-1 Downloading dependency 16 of 515: libxss-dev:armhf=1:1.2.3-1+b3 Downloading dependency 17 of 515: file:armhf=1:5.46-5 Downloading dependency 18 of 515: libasound2-data:armhf=1.2.14-1 Downloading dependency 19 of 515: cpp-arm-linux-gnueabihf:armhf=4:14.2.0-1 Downloading dependency 20 of 515: libxau6:armhf=1:1.0.11-1 Downloading dependency 21 of 515: libwebp-dev:armhf=1.5.0-0.1 Downloading dependency 22 of 515: gcc:armhf=4:14.2.0-1 Downloading dependency 23 of 515: libcairo-script-interpreter2:armhf=1.18.4-1+b1 Downloading dependency 24 of 515: libdeflate0:armhf=1.23-2 Downloading dependency 25 of 515: libdebhelper-perl:armhf=13.24.2 Downloading dependency 26 of 515: mount:armhf=2.41-4 Downloading dependency 27 of 515: libpng-dev:armhf=1.6.47-1.1 Downloading dependency 28 of 515: libxml-namespacesupport-perl:armhf=1.12-2 Downloading dependency 29 of 515: icu-devtools:armhf=76.1-3 Downloading dependency 30 of 515: libsepol2:armhf=3.8.1-1 Downloading dependency 31 of 515: libcommons-logging-java:armhf=1.3.0-1 Downloading dependency 32 of 515: libgomp1:armhf=14.2.0-19 Downloading dependency 33 of 515: liblapack3:armhf=3.12.1-2 Downloading dependency 34 of 515: libunicode-linebreak-perl:armhf=0.0.20190101-1+b9 Downloading dependency 35 of 515: native-architecture:armhf=0.2.6 Downloading dependency 36 of 515: texinfo:armhf=7.1.1-1 Downloading dependency 37 of 515: openjdk-21-jdk:armhf=21.0.7+6-1 Downloading dependency 38 of 515: libx11-xcb1:armhf=2:1.8.12-1 Downloading dependency 39 of 515: libsqlite3-0:armhf=3.46.1-3 Downloading dependency 40 of 515: x11-common:armhf=1:7.7+24 Downloading dependency 41 of 515: debhelper:armhf=13.24.2 Downloading dependency 42 of 515: dh-autoreconf:armhf=20 Downloading dependency 43 of 515: libpangoxft-1.0-0:armhf=1.56.3-1 Downloading dependency 44 of 515: libgnutls28-dev:armhf=3.8.9-2 Downloading dependency 45 of 515: gcc-14:armhf=14.2.0-19 Downloading dependency 46 of 515: libxcb-xfixes0:armhf=1.17.0-2+b1 Downloading dependency 47 of 515: libxt6t64:armhf=1:1.2.1-1.2+b2 Downloading dependency 48 of 515: systemd-sysv:armhf=257.5-2 Downloading dependency 49 of 515: libgcc-14-dev:armhf=14.2.0-19 Downloading dependency 50 of 515: libuuid1:armhf=2.41-4 Downloading dependency 51 of 515: libmpfr6:armhf=4.2.2-1 Downloading dependency 52 of 515: librtmp-dev:armhf=2.4+20151223.gitfa8646d.1-2+b5 Downloading dependency 53 of 515: gfortran-14-arm-linux-gnueabihf:armhf=14.2.0-19 Downloading dependency 54 of 515: libbz2-dev:armhf=1.0.8-6 Downloading dependency 55 of 515: libxft-dev:armhf=2.3.6-1+b4 Downloading dependency 56 of 515: libatspi2.0-0t64:armhf=2.56.2-1 Downloading dependency 57 of 515: libice-dev:armhf=2:1.1.1-1 Downloading dependency 58 of 515: libkadm5clnt-mit12:armhf=1.21.3-5 Downloading dependency 59 of 515: mpack:armhf=1.6-18+b2 Downloading dependency 60 of 515: libaudit1:armhf=1:4.0.2-2+b2 Downloading dependency 61 of 515: make:armhf=4.4.1-2 Downloading dependency 62 of 515: libglib2.0-data:armhf=2.84.1-2 Downloading dependency 63 of 515: default-jdk:armhf=2:1.21-76 Downloading dependency 64 of 515: g++:armhf=4:14.2.0-1 Downloading dependency 65 of 515: ucf:armhf=3.0051 Downloading dependency 66 of 515: libxext-dev:armhf=2:1.3.4-1+b3 Downloading dependency 67 of 515: fonts-dejavu-mono:armhf=2.37-8 Downloading dependency 68 of 515: libcairo2-dev:armhf=1.18.4-1+b1 Downloading dependency 69 of 515: libtexlua53-5:armhf=2024.20240313.70630+ds-6 Downloading dependency 70 of 515: libgbm1:armhf=25.0.4-1 Downloading dependency 71 of 515: libxdamage1:armhf=1:1.1.6-1+b2 Downloading dependency 72 of 515: bison:armhf=2:3.8.2+dfsg-1+b2 Downloading dependency 73 of 515: libxcb-render0-dev:armhf=1.17.0-2+b1 Downloading dependency 74 of 515: netbase:armhf=6.5 Downloading dependency 75 of 515: po-debconf:armhf=1.0.21+nmu1 Downloading dependency 76 of 515: autoconf:armhf=2.72-3.1 Downloading dependency 77 of 515: gcc-arm-linux-gnueabihf:armhf=4:14.2.0-1 Downloading dependency 78 of 515: libgfortran5:armhf=14.2.0-19 Downloading dependency 79 of 515: libxtst6:armhf=2:1.2.5-1 Downloading dependency 80 of 515: libblkid1:armhf=2.41-4 Downloading dependency 81 of 515: libgfortran-14-dev:armhf=14.2.0-19 Downloading dependency 82 of 515: pkgconf:armhf=1.8.1-4 Downloading dependency 83 of 515: libcurl4-openssl-dev:armhf=8.13.0-5 Downloading dependency 84 of 515: libssl3t64:armhf=3.5.0-1 Downloading dependency 85 of 515: libicu-dev:armhf=76.1-3 Downloading dependency 86 of 515: libkpathsea6:armhf=2024.20240313.70630+ds-6 Downloading dependency 87 of 515: openjdk-21-jre:armhf=21.0.7+6-1 Downloading dependency 88 of 515: libpython3.13-stdlib:armhf=3.13.3-2 Downloading dependency 89 of 515: libavahi-client3:armhf=0.8-16 Downloading dependency 90 of 515: libxml-sax-perl:armhf=1.02+dfsg-4 Downloading dependency 91 of 515: sensible-utils:armhf=0.0.25 Downloading dependency 92 of 515: libsynctex2:armhf=2024.20240313.70630+ds-6 Downloading dependency 93 of 515: libjpeg62-turbo-dev:armhf=1:2.1.5-3.1 Downloading dependency 94 of 515: libgnutls30t64:armhf=3.8.9-2 Downloading dependency 95 of 515: fontconfig:armhf=2.15.0-2.3 Downloading dependency 96 of 515: libcairo2:armhf=1.18.4-1+b1 Downloading dependency 97 of 515: libedit2:armhf=3.1-20250104-1 Downloading dependency 98 of 515: libgraphite2-dev:armhf=1.3.14-2+b1 Downloading dependency 99 of 515: libnettle8t64:armhf=3.10.1-1 Downloading dependency 100 of 515: libgdk-pixbuf-2.0-0:armhf=2.42.12+dfsg-2 Downloading dependency 101 of 515: libicu76:armhf=76.1-3 Downloading dependency 102 of 515: libkdb5-10t64:armhf=1.21.3-5 Downloading dependency 103 of 515: libfontbox-java:armhf=1:1.8.16-5 Downloading dependency 104 of 515: zlib1g:armhf=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 105 of 515: readline-common:armhf=8.2-6 Downloading dependency 106 of 515: libpangocairo-1.0-0:armhf=1.56.3-1 Downloading dependency 107 of 515: libxxf86vm1:armhf=1:1.1.4-1+b4 Downloading dependency 108 of 515: libxcb-shm0-dev:armhf=1.17.0-2+b1 Downloading dependency 109 of 515: libgraphite2-3:armhf=1.3.14-2+b1 Downloading dependency 110 of 515: libxfont2:armhf=1:2.0.6-1+b3 Downloading dependency 111 of 515: xorg-sgml-doctools:armhf=1:1.11-1.1 Downloading dependency 112 of 515: libmime-charset-perl:armhf=1.013.1-2 Downloading dependency 113 of 515: base-passwd:armhf=3.6.7 Downloading dependency 114 of 515: python3.13-minimal:armhf=3.13.3-2 Downloading dependency 115 of 515: coreutils:armhf=9.7-2 Downloading dependency 116 of 515: libc-bin:armhf=2.41-7 Downloading dependency 117 of 515: findutils:armhf=4.10.0-3 Downloading dependency 118 of 515: gir1.2-harfbuzz-0.0:armhf=10.2.0-1+b1 Downloading dependency 119 of 515: libkrb5-3:armhf=1.21.3-5 Downloading dependency 120 of 515: dash:armhf=0.5.12-12 Downloading dependency 121 of 515: libglib2.0-dev-bin:armhf=2.84.1-2 Downloading dependency 122 of 515: libxcb1:armhf=1.17.0-2+b1 Downloading dependency 123 of 515: libtk8.6:armhf=8.6.16-1 Downloading dependency 124 of 515: libblkid-dev:armhf=2.41-4 Downloading dependency 125 of 515: libcap-ng0:armhf=0.8.5-4+b1 Downloading dependency 126 of 515: libfile-homedir-perl:armhf=1.006-2 Downloading dependency 127 of 515: libxss1:armhf=1:1.2.3-1+b3 Downloading dependency 128 of 515: libcups2t64:armhf=2.4.10-2+b1Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcups2t64 armhf 2.4.10-2+b1 [220 kB] Fetched 220 kB in 0s (11.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph15ev47h/libcups2t64_2.4.10-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB] Fetched 19.7 kB in 0s (1228 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9guww3vf/libfile-stripnondeterminism-perl_1.14.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf bzip2 armhf 1.0.8-6 [39.4 kB] Fetched 39.4 kB in 0s (2729 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmlz2q2fd/bzip2_1.0.8-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gfortran armhf 4:14.2.0-1 [1428 B] Fetched 1428 B in 0s (89.1 kB/s) dpkg-name: info: moved 'gfortran_4%3a14.2.0-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpwr9ulj5r/gfortran_14.2.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libp11-kit-dev armhf 0.25.5-3 [208 kB] Fetched 208 kB in 0s (11.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqvik73hc/libp11-kit-dev_0.25.5-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libglvnd0 armhf 1.7.0-1+b2 [51.8 kB] Fetched 51.8 kB in 0s (3521 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0ihey9ke/libglvnd0_1.7.0-1+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf bsdutils armhf 1:2.41-4 [101 kB] Fetched 101 kB in 0s (6583 kB/s) dpkg-name: info: moved 'bsdutils_1%3a2.41-4_armhf.deb' to '/srv/rebuilderd/tmp/tmpmred9e8n/bsdutils_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb-render0 armhf 1.17.0-2+b1 [114 kB] Fetched 114 kB in 0s (7503 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbgiefwur/libxcb-render0_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf xfonts-encodings all 1:1.0.4-2.2 [577 kB] Fetched 577 kB in 0s (43.3 MB/s) dpkg-name: info: moved 'xfonts-encodings_1%3a1.0.4-2.2_all.deb' to '/srv/rebuilderd/tmp/tmpypyfydcs/xfonts-encodings_1.0.4-2.2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpam-modules armhf 1.7.0-3 [162 kB] Fetched 162 kB in 0s (10.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfwj2g023/libpam-modules_1.7.0-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf perl-base armhf 5.40.1-3 [1515 kB] Fetched 1515 kB in 0s (50.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptogruoju/perl-base_5.40.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsensors-config all 1:3.6.2-2 [16.2 kB] Fetched 16.2 kB in 0s (1111 kB/s) dpkg-name: info: moved 'libsensors-config_1%3a3.6.2-2_all.deb' to '/srv/rebuilderd/tmp/tmpm5c0dtzz/libsensors-config_3.6.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf xz-utils armhf 5.8.1-1 [657 kB] Fetched 657 kB in 0s (40.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcrhnxoqb/xz-utils_5.8.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpaper-utils armhf 2.2.5-0.3+b2 [15.1 kB] Fetched 15.1 kB in 0s (1043 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplqk0ovku/libpaper-utils_2.2.5-0.3+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf openssl armhf 3.5.0-1 [1456 kB] Fetched 1456 kB in 0s (76.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn9lxyuov/openssl_3.5.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf python3 armhf 3.13.3-1 [28.2 kB] Fetched 28.2 kB in 0s (1831 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmz5e50c3/python3_3.13.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgtk-3-common all 3.24.49-3 [4908 kB] Fetched 4908 kB in 0s (112 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvdktxu5y/libgtk-3-common_3.24.49-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf m4 armhf 1.4.19-8 [272 kB] Fetched 272 kB in 0s (14.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk0e_ay11/m4_1.4.19-8_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libepoxy0 armhf 1.5.10-2 [165 kB] Fetched 165 kB in 0s (10.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdy1nbxly/libepoxy0_1.5.10-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf comerr-dev armhf 2.1-1.47.2-1+b1 [55.4 kB] Fetched 55.4 kB in 0s (3834 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_3dq55wq/comerr-dev_2.1-1.47.2-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libldap-dev armhf 2.6.9+dfsg-2 [286 kB] Fetched 286 kB in 0s (15.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpra91d9j7/libldap-dev_2.6.9+dfsg-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.4 [604 kB] Fetched 604 kB in 0s (37.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpntigmzvh/libxml2_2.12.7+dfsg+really2.9.14-0.4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libptexenc1 armhf 2024.20240313.70630+ds-6 [44.6 kB] Fetched 44.6 kB in 0s (2669 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiqe5kgk5/libptexenc1_2024.20240313.70630+ds-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dconf-service armhf 0.40.0-5 [27.8 kB] Fetched 27.8 kB in 0s (1766 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpq_zr2n2r/dconf-service_0.40.0-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpixman-1-dev armhf 0.44.0-3 [11.4 kB] Fetched 11.4 kB in 0s (808 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgvei8_cv/libpixman-1-dev_0.44.0-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpcre2-posix3 armhf 10.45-1 [63.1 kB] Fetched 63.1 kB in 0s (3740 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxcj3orch/libpcre2-posix3_10.45-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcurl4t64 armhf 8.13.0-5 [330 kB] Fetched 330 kB in 0s (15.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqd3df4xv/libcurl4t64_8.13.0-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpcre2-8-0 armhf 10.45-1 [259 kB] Fetched 259 kB in 0s (25.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwecbv4d1/libpcre2-8-0_10.45-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf perl armhf 5.40.1-3 [267 kB] Fetched 267 kB in 0s (17.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi4x2fjfv/perl_5.40.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libzstd-dev armhf 1.5.7+dfsg-1 [333 kB] Fetched 333 kB in 0s (16.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl4xxel67/libzstd-dev_1.5.7+dfsg-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpango-1.0-0 armhf 1.56.3-1 [202 kB] Fetched 202 kB in 0s (11.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzd4zcsjx/libpango-1.0-0_1.56.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texlive-binaries armhf 2024.20240313.70630+ds-6 [6110 kB] Fetched 6110 kB in 0s (159 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2colywng/texlive-binaries_2024.20240313.70630+ds-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libisl23 armhf 0.27-1 [517 kB] Fetched 517 kB in 0s (44.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprd0vvyxp/libisl23_0.27-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libjbig-dev armhf 2.1-6.1+b2 [27.8 kB] Fetched 27.8 kB in 0s (1583 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu9tps1ht/libjbig-dev_2.1-6.1+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtiff-dev armhf 4.7.0-3 [463 kB] Fetched 463 kB in 0s (28.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptqsx0t69/libtiff-dev_4.7.0-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libnss3 armhf 2:3.110-1 [1207 kB] Fetched 1207 kB in 0s (91.0 MB/s) dpkg-name: info: moved 'libnss3_2%3a3.110-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpiubniczn/libnss3_3.110-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Fetched 326 kB in 0s (31.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqw_cdiyf/libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcommons-parent-java all 56-1 [10.8 kB] Fetched 10.8 kB in 0s (623 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmh1lbt0n/libcommons-parent-java_56-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libglx-mesa0 armhf 25.0.4-1 [123 kB] Fetched 123 kB in 0s (6648 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfhl6iu7r/libglx-mesa0_25.0.4-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Fetched 35.0 kB in 0s (2148 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk99yebqi/libpipeline1_1.5.8-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf debianutils armhf 5.22 [91.2 kB] Fetched 91.2 kB in 0s (6289 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu4c_s0k5/debianutils_5.22_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf sysvinit-utils armhf 3.14-4 [32.8 kB] Fetched 32.8 kB in 0s (2021 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3q6nsn03/sysvinit-utils_3.14-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf tcl8.6-dev armhf 8.6.16+dfsg-1 [947 kB] Fetched 947 kB in 0s (52.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwi62d2gg/tcl8.6-dev_8.6.16+dfsg-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf ca-certificates all 20250419 [162 kB] Fetched 162 kB in 0s (14.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf1vwj8o8/ca-certificates_20250419_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfontconfig-dev armhf 2.15.0-2.3 [397 kB] Fetched 397 kB in 0s (19.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpaa5sdm90/libfontconfig-dev_2.15.0-2.3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxml-sax-base-perl all 1.09-3 [20.6 kB] Fetched 20.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg7krxws6/libxml-sax-base-perl_1.09-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texlive-latex-base all 2024.20250309-1 [1294 kB] Fetched 1294 kB in 0s (67.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmir43jah/texlive-latex-base_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libharfbuzz0b armhf 10.2.0-1+b1 [419 kB] Fetched 419 kB in 0s (20.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwxjvj59j/libharfbuzz0b_10.2.0-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf g++-arm-linux-gnueabihf armhf 4:14.2.0-1 [1204 B] Fetched 1204 B in 0s (98.5 kB/s) dpkg-name: info: moved 'g++-arm-linux-gnueabihf_4%3a14.2.0-1_armhf.deb' to '/srv/rebuilderd/tmp/tmp9d87qkv3/g++-arm-linux-gnueabihf_14.2.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libidn2-dev armhf 2.3.8-2 [97.6 kB] Fetched 97.6 kB in 0s (7629 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6fuff4uq/libidn2-dev_2.3.8-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libncurses-dev armhf 6.5+20250216-2 [312 kB] Fetched 312 kB in 0s (14.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz9kgvbk1/libncurses-dev_6.5+20250216-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libmount1 armhf 2.41-4 [189 kB] Fetched 189 kB in 0s (9459 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzwunikdw/libmount1_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libstdc++-14-dev armhf 14.2.0-19 [2380 kB] Fetched 2380 kB in 0s (62.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4qmkw504/libstdc++-14-dev_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texlive-extra-utils all 2024.20250309-2 [67.6 MB] Fetched 67.6 MB in 0s (250 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl4mx3r4z/texlive-extra-utils_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf tcl8.6 armhf 8.6.16+dfsg-1 [121 kB] Fetched 121 kB in 0s (11.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnqm2ck_q/tcl8.6_8.6.16+dfsg-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpdfbox-java all 1:1.8.16-5 [5527 kB] Fetched 5527 kB in 0s (175 MB/s) dpkg-name: info: moved 'libpdfbox-java_1%3a1.8.16-5_all.deb' to '/srv/rebuilderd/tmp/tmpesyyydn5/libpdfbox-java_1.8.16-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libkrb5support0 armhf 1.21.3-5 [30.4 kB] Fetched 30.4 kB in 0s (1778 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmmqq6qw5/libkrb5support0_1.21.3-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libthai-dev armhf 0.1.29-2+b1 [21.4 kB] Fetched 21.4 kB in 0s (1321 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprayrp653/libthai-dev_0.1.29-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libc-dev-bin armhf 2.41-7 [55.9 kB] Fetched 55.9 kB in 0s (4572 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnwvmawbn/libc-dev-bin_2.41-7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libunistring5 armhf 1.3-2 [441 kB] Fetched 441 kB in 0s (25.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwce3d1ox/libunistring5_1.3-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpsl5t64 armhf 0.21.2-1.1+b1 [55.8 kB] Fetched 55.8 kB in 0s (3283 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpseyxzzmc/libpsl5t64_0.21.2-1.1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpng16-16t64 armhf 1.6.47-1.1 [264 kB] Fetched 264 kB in 0s (23.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphjibk3t9/libpng16-16t64_1.6.47-1.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libproc2-0 armhf 2:4.0.4-8 [56.8 kB] Fetched 56.8 kB in 0s (3918 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-8_armhf.deb' to '/srv/rebuilderd/tmp/tmpf46r7xf0/libproc2-0_4.0.4-8_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dbus armhf 1.16.2-2 [69.1 kB] Fetched 69.1 kB in 0s (4712 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsl5kf0y3/dbus_1.16.2-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf preview-latex-style all 13.2-1 [350 kB] Fetched 350 kB in 0s (22.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpklu56dbl/preview-latex-style_13.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf girepository-tools armhf 2.84.1-2 [135 kB] Fetched 135 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0w5_4ya9/girepository-tools_2.84.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf liblzma-dev armhf 5.8.1-1 [336 kB] Fetched 336 kB in 0s (21.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx6m8aity/liblzma-dev_5.8.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libk5crypto3 armhf 1.21.3-5 [76.0 kB] Fetched 76.0 kB in 0s (5026 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsyrlcudu/libk5crypto3_1.21.3-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libapache-pom-java all 33-2 [5852 B] Fetched 5852 B in 0s (431 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl6ceagj3/libapache-pom-java_33-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf tzdata all 2025b-2 [260 kB] Fetched 260 kB in 0s (15.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnk_q_m51/tzdata_2025b-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxkbcommon0 armhf 1.7.0-2 [99.7 kB] Fetched 99.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphmdlvcq8/libxkbcommon0_1.7.0-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf uuid-dev armhf 2.41-4 [47.3 kB] Fetched 47.3 kB in 0s (2824 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpd3wb9m3u/uuid-dev_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsm-dev armhf 2:1.2.6-1 [38.8 kB] Fetched 38.8 kB in 0s (2200 kB/s) dpkg-name: info: moved 'libsm-dev_2%3a1.2.6-1_armhf.deb' to '/srv/rebuilderd/tmp/tmp0lt78j8l/libsm-dev_1.2.6-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libasan8 armhf 14.2.0-19 [2583 kB] Fetched 2583 kB in 0s (102 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_2eq124j/libasan8_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxshmfence1 armhf 1.3.3-1 [10.7 kB] Fetched 10.7 kB in 0s (692 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyea5ovru/libxshmfence1_1.3.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf mawk armhf 1.3.4.20250131-1 [131 kB] Fetched 131 kB in 0s (8477 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp252ma5_9/mawk_1.3.4.20250131-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libssl-dev armhf 3.5.0-1 [2561 kB] Fetched 2561 kB in 0s (142 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplmpj5t77/libssl-dev_3.5.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcc1-0 armhf 14.2.0-19 [36.5 kB] Fetched 36.5 kB in 0s (3444 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe5u01tz8/libcc1-0_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfontconfig1 armhf 2.15.0-2.3 [371 kB] Fetched 371 kB in 0s (23.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpabwx7gj1/libfontconfig1_2.15.0-2.3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfribidi-dev armhf 1.0.16-1 [64.0 kB] Fetched 64.0 kB in 0s (4130 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw0cwet21/libfribidi-dev_1.0.16-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf binutils-common armhf 2.44-3 [2509 kB] Fetched 2509 kB in 0s (126 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_5gjtq9q/binutils-common_2.44-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf t1utils armhf 1.41-4 [54.7 kB] Fetched 54.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwe61_pyc/t1utils_1.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgtk-3-0t64 armhf 3.24.49-3 [2384 kB] Fetched 2384 kB in 0s (131 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn6j09mpv/libgtk-3-0t64_3.24.49-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gcc-14-arm-linux-gnueabihf armhf 14.2.0-19 [15.8 MB] Fetched 15.8 MB in 0s (258 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7oddd1go/gcc-14-arm-linux-gnueabihf_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libjbig0 armhf 2.1-6.1+b2 [27.3 kB] Fetched 27.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp930oqap_/libjbig0_2.1-6.1+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libthai-data all 0.1.29-2 [168 kB] Fetched 168 kB in 0s (11.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgrnojiz3/libthai-data_0.1.29-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsystemd-shared armhf 257.5-2 [1963 kB] Fetched 1963 kB in 0s (92.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6yoie4za/libsystemd-shared_257.5-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libllvm19 armhf 1:19.1.7-3 [23.8 MB] Fetched 23.8 MB in 0s (276 MB/s) dpkg-name: info: moved 'libllvm19_1%3a19.1.7-3_armhf.deb' to '/srv/rebuilderd/tmp/tmpus9sh2vn/libllvm19_19.1.7-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf linux-libc-dev all 6.12.25-1 [2565 kB] Fetched 2565 kB in 0s (60.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwk475z9e/linux-libc-dev_6.12.25-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf hicolor-icon-theme all 0.18-2 [11.8 kB] Fetched 11.8 kB in 0s (1076 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9domh8yv/hicolor-icon-theme_0.18-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf util-linux armhf 2.41-4 [1134 kB] Fetched 1134 kB in 0s (43.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptwb1akvb/util-linux_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf xvfb armhf 2:21.1.16-1 [3046 kB] Fetched 3046 kB in 0s (57.5 MB/s) dpkg-name: info: moved 'xvfb_2%3a21.1.16-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpgikt1s9c/xvfb_21.1.16-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf tk8.6 armhf 8.6.16-1 [69.5 kB] Fetched 69.5 kB in 0s (6235 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphibin5jm/tk8.6_8.6.16-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libx11-6 armhf 2:1.8.12-1 [756 kB] Fetched 756 kB in 0s (52.0 MB/s) dpkg-name: info: moved 'libx11-6_2%3a1.8.12-1_armhf.deb' to '/srv/rebuilderd/tmp/tmprsoqn8j4/libx11-6_1.8.12-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtirpc-dev armhf 1.3.6+ds-1 [180 kB] Fetched 180 kB in 0s (17.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0gb4m0i8/libtirpc-dev_1.3.6+ds-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libatk-bridge2.0-0t64 armhf 2.56.2-1 [60.4 kB] Fetched 60.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphdmunvjq/libatk-bridge2.0-0t64_2.56.2-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libyaml-tiny-perl all 1.76-1 [29.8 kB] Fetched 29.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0ciy96f5/libyaml-tiny-perl_1.76-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxmuu1 armhf 2:1.1.3-3+b4 [21.3 kB] Fetched 21.3 kB in 0s (1413 kB/s) dpkg-name: info: moved 'libxmuu1_2%3a1.1.3-3+b4_armhf.deb' to '/srv/rebuilderd/tmp/tmp3oltyjg9/libxmuu1_1.1.3-3+b4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gir1.2-glib-2.0 armhf 2.84.1-2 [197 kB] Fetched 197 kB in 0s (10.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1ok7tc95/gir1.2-glib-2.0_2.84.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dpkg armhf 1.22.18 [1494 kB] Fetched 1494 kB in 0s (69.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnzmfmyzr/dpkg_1.22.18_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libavahi-common3 armhf 0.8-16 [41.2 kB] Fetched 41.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj1dx4iwi/libavahi-common3_0.8-16_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libexpat1 armhf 2.7.1-1 [85.6 kB] Fetched 85.6 kB in 0s (8204 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpurdu6i5w/libexpat1_2.7.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfreetype-dev armhf 2.13.3+dfsg-1 [561 kB] Fetched 561 kB in 0s (23.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbitq1iiw/libfreetype-dev_2.13.3+dfsg-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb-randr0 armhf 1.17.0-2+b1 [116 kB] Fetched 116 kB in 0s (11.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0665lsyf/libxcb-randr0_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libmd0 armhf 1.1.0-2+b1 [31.9 kB] Fetched 31.9 kB in 0s (1856 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxsg15ug4/libmd0_1.1.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libselinux1 armhf 3.8.1-1 [74.8 kB] Fetched 74.8 kB in 0s (4420 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfts_c_im/libselinux1_3.8.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libglib2.0-0t64 armhf 2.84.1-2 [1340 kB] Fetched 1340 kB in 0s (62.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7l3xjl_i/libglib2.0-0t64_2.84.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libc6 armhf 2.41-7 [2246 kB] Fetched 2246 kB in 0s (116 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6owqefym/libc6_2.41-7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgssrpc4t64 armhf 1.21.3-5 [52.9 kB] Fetched 52.9 kB in 0s (4503 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2z41q6uw/libgssrpc4t64_1.21.3-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libz3-4 armhf 4.13.3-1 [7252 kB] Fetched 7252 kB in 0s (196 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuniysu5e/libz3-4_4.13.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gzip armhf 1.13-1 [134 kB] Fetched 134 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn8wxiuow/gzip_1.13-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgmp-dev armhf 2:6.3.0+dfsg-3 [592 kB] Fetched 592 kB in 0s (26.5 MB/s) dpkg-name: info: moved 'libgmp-dev_2%3a6.3.0+dfsg-3_armhf.deb' to '/srv/rebuilderd/tmp/tmpedynrv29/libgmp-dev_6.3.0+dfsg-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsysprof-capture-4-dev armhf 48.0-2 [45.7 kB] Fetched 45.7 kB in 0s (2588 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptqn6rl5x/libsysprof-capture-4-dev_48.0-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcom-err2 armhf 1.47.2-1+b1 [23.6 kB] Fetched 23.6 kB in 0s (1360 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvnldwkhn/libcom-err2_1.47.2-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libnghttp2-14 armhf 1.64.0-1.1 [63.0 kB] Fetched 63.0 kB in 0s (4094 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpysoow7t7/libnghttp2-14_1.64.0-1.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dbus-bin armhf 1.16.2-2 [78.3 kB] Fetched 78.3 kB in 0s (5204 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplkb5gegl/dbus-bin_1.16.2-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgirepository-2.0-0 armhf 2.84.1-2 [127 kB] Fetched 127 kB in 0s (6965 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5xk94pju/libgirepository-2.0-0_2.84.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtext-wrapi18n-perl all 0.06-10 [8808 B] Fetched 8808 B in 0s (763 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnh2cci94/libtext-wrapi18n-perl_0.06-10_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libzzip-0-13t64 armhf 0.13.78+dfsg.1-0.1 [55.9 kB] Fetched 55.9 kB in 0s (5020 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiuzis1mp/libzzip-0-13t64_0.13.78+dfsg.1-0.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dbus-user-session armhf 1.16.2-2 [52.1 kB] Fetched 52.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdq1j9fdf/dbus-user-session_1.16.2-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf init-system-helpers all 1.68 [38.7 kB] Fetched 38.7 kB in 0s (3576 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp711fqbk2/init-system-helpers_1.68_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgl1 armhf 1.7.0-1+b2 [88.2 kB] Fetched 88.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0fprg4gg/libgl1_1.7.0-1+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf bash armhf 5.2.37-2 [1433 kB] Fetched 1433 kB in 0s (87.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi49dw4fm/bash_5.2.37-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libnghttp2-dev armhf 1.64.0-1.1 [103 kB] Fetched 103 kB in 0s (6301 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp07ng9fvi/libnghttp2-dev_1.64.0-1.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf bash-completion all 1:2.16.0-7 [319 kB] Fetched 319 kB in 0s (29.1 MB/s) dpkg-name: info: moved 'bash-completion_1%3a2.16.0-7_all.deb' to '/srv/rebuilderd/tmp/tmps9rqru18/bash-completion_2.16.0-7_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfontconfig1-dev armhf 2.15.0-2.3 [269 kB] Fetched 269 kB in 0s (12.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpngho14d9/libfontconfig1-dev_2.15.0-2.3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgif7 armhf 5.2.2-1+b1 [41.4 kB] Fetched 41.4 kB in 0s (2848 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8pkt4opj/libgif7_5.2.2-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfile-which-perl all 1.27-2 [15.1 kB] Fetched 15.1 kB in 0s (987 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprvef4906/libfile-which-perl_1.27-2_all.deb' Downloading dependency 129 of 515: libfile-stripnondeterminism-perl:armhf=1.14.1-2 Downloading dependency 130 of 515: bzip2:armhf=1.0.8-6 Downloading dependency 131 of 515: gfortran:armhf=4:14.2.0-1 Downloading dependency 132 of 515: libp11-kit-dev:armhf=0.25.5-3 Downloading dependency 133 of 515: libglvnd0:armhf=1.7.0-1+b2 Downloading dependency 134 of 515: bsdutils:armhf=1:2.41-4 Downloading dependency 135 of 515: libxcb-render0:armhf=1.17.0-2+b1 Downloading dependency 136 of 515: xfonts-encodings:armhf=1:1.0.4-2.2 Downloading dependency 137 of 515: libpam-modules:armhf=1.7.0-3 Downloading dependency 138 of 515: perl-base:armhf=5.40.1-3 Downloading dependency 139 of 515: libsensors-config:armhf=1:3.6.2-2 Downloading dependency 140 of 515: xz-utils:armhf=5.8.1-1 Downloading dependency 141 of 515: libpaper-utils:armhf=2.2.5-0.3+b2 Downloading dependency 142 of 515: openssl:armhf=3.5.0-1 Downloading dependency 143 of 515: python3:armhf=3.13.3-1 Downloading dependency 144 of 515: libgtk-3-common:armhf=3.24.49-3 Downloading dependency 145 of 515: m4:armhf=1.4.19-8 Downloading dependency 146 of 515: libepoxy0:armhf=1.5.10-2 Downloading dependency 147 of 515: comerr-dev:armhf=2.1-1.47.2-1+b1 Downloading dependency 148 of 515: libldap-dev:armhf=2.6.9+dfsg-2 Downloading dependency 149 of 515: libxml2:armhf=2.12.7+dfsg+really2.9.14-0.4 Downloading dependency 150 of 515: libptexenc1:armhf=2024.20240313.70630+ds-6 Downloading dependency 151 of 515: dconf-service:armhf=0.40.0-5 Downloading dependency 152 of 515: libpixman-1-dev:armhf=0.44.0-3 Downloading dependency 153 of 515: libpcre2-posix3:armhf=10.45-1 Downloading dependency 154 of 515: libcurl4t64:armhf=8.13.0-5 Downloading dependency 155 of 515: libpcre2-8-0:armhf=10.45-1 Downloading dependency 156 of 515: perl:armhf=5.40.1-3 Downloading dependency 157 of 515: libzstd-dev:armhf=1.5.7+dfsg-1 Downloading dependency 158 of 515: libpango-1.0-0:armhf=1.56.3-1 Downloading dependency 159 of 515: texlive-binaries:armhf=2024.20240313.70630+ds-6 Downloading dependency 160 of 515: libisl23:armhf=0.27-1 Downloading dependency 161 of 515: libjbig-dev:armhf=2.1-6.1+b2 Downloading dependency 162 of 515: libtiff-dev:armhf=4.7.0-3 Downloading dependency 163 of 515: libnss3:armhf=2:3.110-1 Downloading dependency 164 of 515: libjs-jquery:armhf=3.6.1+dfsg+~3.5.14-1 Downloading dependency 165 of 515: libcommons-parent-java:armhf=56-1 Downloading dependency 166 of 515: libglx-mesa0:armhf=25.0.4-1 Downloading dependency 167 of 515: libpipeline1:armhf=1.5.8-1 Downloading dependency 168 of 515: debianutils:armhf=5.22 Downloading dependency 169 of 515: sysvinit-utils:armhf=3.14-4 Downloading dependency 170 of 515: tcl8.6-dev:armhf=8.6.16+dfsg-1 Downloading dependency 171 of 515: ca-certificates:armhf=20250419 Downloading dependency 172 of 515: libfontconfig-dev:armhf=2.15.0-2.3 Downloading dependency 173 of 515: libxml-sax-base-perl:armhf=1.09-3 Downloading dependency 174 of 515: texlive-latex-base:armhf=2024.20250309-1 Downloading dependency 175 of 515: libharfbuzz0b:armhf=10.2.0-1+b1 Downloading dependency 176 of 515: g++-arm-linux-gnueabihf:armhf=4:14.2.0-1 Downloading dependency 177 of 515: libidn2-dev:armhf=2.3.8-2 Downloading dependency 178 of 515: libncurses-dev:armhf=6.5+20250216-2 Downloading dependency 179 of 515: libmount1:armhf=2.41-4 Downloading dependency 180 of 515: libstdc++-14-dev:armhf=14.2.0-19 Downloading dependency 181 of 515: texlive-extra-utils:armhf=2024.20250309-2 Downloading dependency 182 of 515: tcl8.6:armhf=8.6.16+dfsg-1 Downloading dependency 183 of 515: libpdfbox-java:armhf=1:1.8.16-5 Downloading dependency 184 of 515: libkrb5support0:armhf=1.21.3-5 Downloading dependency 185 of 515: libthai-dev:armhf=0.1.29-2+b1 Downloading dependency 186 of 515: libc-dev-bin:armhf=2.41-7 Downloading dependency 187 of 515: libunistring5:armhf=1.3-2 Downloading dependency 188 of 515: libpsl5t64:armhf=0.21.2-1.1+b1 Downloading dependency 189 of 515: libpng16-16t64:armhf=1.6.47-1.1 Downloading dependency 190 of 515: libproc2-0:armhf=2:4.0.4-8 Downloading dependency 191 of 515: dbus:armhf=1.16.2-2 Downloading dependency 192 of 515: preview-latex-style:armhf=13.2-1 Downloading dependency 193 of 515: girepository-tools:armhf=2.84.1-2 Downloading dependency 194 of 515: liblzma-dev:armhf=5.8.1-1 Downloading dependency 195 of 515: libk5crypto3:armhf=1.21.3-5 Downloading dependency 196 of 515: libapache-pom-java:armhf=33-2 Downloading dependency 197 of 515: tzdata:armhf=2025b-2 Downloading dependency 198 of 515: libxkbcommon0:armhf=1.7.0-2 Downloading dependency 199 of 515: uuid-dev:armhf=2.41-4 Downloading dependency 200 of 515: libsm-dev:armhf=2:1.2.6-1 Downloading dependency 201 of 515: libasan8:armhf=14.2.0-19 Downloading dependency 202 of 515: libxshmfence1:armhf=1.3.3-1 Downloading dependency 203 of 515: mawk:armhf=1.3.4.20250131-1 Downloading dependency 204 of 515: libssl-dev:armhf=3.5.0-1 Downloading dependency 205 of 515: libcc1-0:armhf=14.2.0-19 Downloading dependency 206 of 515: libfontconfig1:armhf=2.15.0-2.3 Downloading dependency 207 of 515: libfribidi-dev:armhf=1.0.16-1 Downloading dependency 208 of 515: binutils-common:armhf=2.44-3 Downloading dependency 209 of 515: t1utils:armhf=1.41-4 Downloading dependency 210 of 515: libgtk-3-0t64:armhf=3.24.49-3 Downloading dependency 211 of 515: gcc-14-arm-linux-gnueabihf:armhf=14.2.0-19 Downloading dependency 212 of 515: libjbig0:armhf=2.1-6.1+b2 Downloading dependency 213 of 515: libthai-data:armhf=0.1.29-2 Downloading dependency 214 of 515: libsystemd-shared:armhf=257.5-2 Downloading dependency 215 of 515: libllvm19:armhf=1:19.1.7-3 Downloading dependency 216 of 515: linux-libc-dev:armhf=6.12.25-1 Downloading dependency 217 of 515: hicolor-icon-theme:armhf=0.18-2 Downloading dependency 218 of 515: util-linux:armhf=2.41-4 Downloading dependency 219 of 515: xvfb:armhf=2:21.1.16-1 Downloading dependency 220 of 515: tk8.6:armhf=8.6.16-1 Downloading dependency 221 of 515: libx11-6:armhf=2:1.8.12-1 Downloading dependency 222 of 515: libtirpc-dev:armhf=1.3.6+ds-1 Downloading dependency 223 of 515: libatk-bridge2.0-0t64:armhf=2.56.2-1 Downloading dependency 224 of 515: libyaml-tiny-perl:armhf=1.76-1 Downloading dependency 225 of 515: libxmuu1:armhf=2:1.1.3-3+b4 Downloading dependency 226 of 515: gir1.2-glib-2.0:armhf=2.84.1-2 Downloading dependency 227 of 515: dpkg:armhf=1.22.18 Downloading dependency 228 of 515: libavahi-common3:armhf=0.8-16 Downloading dependency 229 of 515: libexpat1:armhf=2.7.1-1 Downloading dependency 230 of 515: libfreetype-dev:armhf=2.13.3+dfsg-1 Downloading dependency 231 of 515: libxcb-randr0:armhf=1.17.0-2+b1 Downloading dependency 232 of 515: libmd0:armhf=1.1.0-2+b1 Downloading dependency 233 of 515: libselinux1:armhf=3.8.1-1 Downloading dependency 234 of 515: libglib2.0-0t64:armhf=2.84.1-2 Downloading dependency 235 of 515: libc6:armhf=2.41-7 Downloading dependency 236 of 515: libgssrpc4t64:armhf=1.21.3-5 Downloading dependency 237 of 515: libz3-4:armhf=4.13.3-1 Downloading dependency 238 of 515: gzip:armhf=1.13-1 Downloading dependency 239 of 515: libgmp-dev:armhf=2:6.3.0+dfsg-3 Downloading dependency 240 of 515: libsysprof-capture-4-dev:armhf=48.0-2 Downloading dependency 241 of 515: libcom-err2:armhf=1.47.2-1+b1 Downloading dependency 242 of 515: libnghttp2-14:armhf=1.64.0-1.1 Downloading dependency 243 of 515: dbus-bin:armhf=1.16.2-2 Downloading dependency 244 of 515: libgirepository-2.0-0:armhf=2.84.1-2 Downloading dependency 245 of 515: libtext-wrapi18n-perl:armhf=0.06-10 Downloading dependency 246 of 515: libzzip-0-13t64:armhf=0.13.78+dfsg.1-0.1 Downloading dependency 247 of 515: dbus-user-session:armhf=1.16.2-2 Downloading dependency 248 of 515: init-system-helpers:armhf=1.68 Downloading dependency 249 of 515: libgl1:armhf=1.7.0-1+b2 Downloading dependency 250 of 515: bash:armhf=5.2.37-2 Downloading dependency 251 of 515: libnghttp2-dev:armhf=1.64.0-1.1 Downloading dependency 252 of 515: bash-completion:armhf=1:2.16.0-7 Downloading dependency 253 of 515: libfontconfig1-dev:armhf=2.15.0-2.3 Downloading dependency 254 of 515: libgif7:armhf=5.2.2-1+b1 Downloading dependency 255 of 515: libfile-which-perl:armhf=1.27-2 Downloading dependency 256 of 515: libsensors5:armhf=1:3.6.2-2Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsensors5 armhf 1:3.6.2-2 [34.5 kB] Fetched 34.5 kB in 0s (3330 kB/s) dpkg-name: info: moved 'libsensors5_1%3a3.6.2-2_armhf.deb' to '/srv/rebuilderd/tmp/tmp7rc7bwd9/libsensors5_3.6.2-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libwayland-server0 armhf 1.23.1-3 [28.2 kB] Fetched 28.2 kB in 0s (1901 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplohmrl2a/libwayland-server0_1.23.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libkrb5-dev armhf 1.21.3-5 [16.1 kB] Fetched 16.1 kB in 0s (883 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp03t_rv1i/libkrb5-dev_1.21.3-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf krb5-multidev armhf 1.21.3-5 [126 kB] Fetched 126 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5v9mmxb_/krb5-multidev_1.21.3-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf ca-certificates-java all 20240118 [11.6 kB] Fetched 11.6 kB in 0s (1144 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb62hkuv7/ca-certificates-java_20240118_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libwebpmux3 armhf 1.5.0-0.1 [123 kB] Fetched 123 kB in 0s (7708 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt7fqzcdo/libwebpmux3_1.5.0-0.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb-glx0 armhf 1.17.0-2+b1 [120 kB] Fetched 120 kB in 0s (6729 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplnzfpjpm/libxcb-glx0_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgdk-pixbuf2.0-common all 2.42.12+dfsg-2 [311 kB] Fetched 311 kB in 0s (19.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe8got8tk/libgdk-pixbuf2.0-common_2.42.12+dfsg-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libp11-kit0 armhf 0.25.5-3 [385 kB] Fetched 385 kB in 0s (17.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc2kmrlu5/libp11-kit0_0.25.5-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxinerama1 armhf 2:1.1.4-3+b4 [15.6 kB] Fetched 15.6 kB in 0s (653 kB/s) dpkg-name: info: moved 'libxinerama1_2%3a1.1.4-3+b4_armhf.deb' to '/srv/rebuilderd/tmp/tmpj6ruzwjb/libxinerama1_1.1.4-3+b4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf tar armhf 1.35+dfsg-3.1 [794 kB] Fetched 794 kB in 0s (45.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp26r81buz/tar_1.35+dfsg-3.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf hostname armhf 3.25 [10.0 kB] Fetched 10.0 kB in 0s (550 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3x9s732o/hostname_3.25_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpcre2-dev armhf 10.45-1 [755 kB] Fetched 755 kB in 0s (44.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl495797y/libpcre2-dev_10.45-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libexpat1-dev armhf 2.7.1-1 [142 kB] Fetched 142 kB in 0s (8541 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpei_8q4t0/libexpat1-dev_2.7.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcairo-gobject2 armhf 1.18.4-1+b1 [129 kB] Fetched 129 kB in 0s (11.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpok2ail33/libcairo-gobject2_1.18.4-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texinfo-lib armhf 7.1.1-1+b1 [209 kB] Fetched 209 kB in 0s (20.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp5zip6s6/texinfo-lib_7.1.1-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf cpp-14-arm-linux-gnueabihf armhf 14.2.0-19 [8238 kB] Fetched 8238 kB in 0s (200 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphmenj486/cpp-14-arm-linux-gnueabihf_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libwebpdecoder3 armhf 1.5.0-0.1 [185 kB] Fetched 185 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4dp5ypn8/libwebpdecoder3_1.5.0-0.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf xkb-data all 2.42-1 [790 kB] Fetched 790 kB in 0s (48.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph3v_ab8f/xkb-data_2.42-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfontenc1 armhf 1:1.1.8-1+b2 [20.9 kB] Fetched 20.9 kB in 0s (2053 kB/s) dpkg-name: info: moved 'libfontenc1_1%3a1.1.8-1+b2_armhf.deb' to '/srv/rebuilderd/tmp/tmp4_d1rxzg/libfontenc1_1.1.8-1+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libubsan1 armhf 14.2.0-19 [1040 kB] Fetched 1040 kB in 0s (72.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzrrnud1k/libubsan1_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgcc-s1 armhf 14.2.0-19 [37.0 kB] Fetched 37.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqim50ik_/libgcc-s1_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtext-charwidth-perl armhf 0.04-11+b4 [9128 B] Fetched 9128 B in 0s (548 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmdrcgh_f/libtext-charwidth-perl_0.04-11+b4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libudev1 armhf 257.5-2 [141 kB] Fetched 141 kB in 0s (7504 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprjnrnphn/libudev1_257.5-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxmu6 armhf 2:1.1.3-3+b4 [51.2 kB] Fetched 51.2 kB in 0s (2889 kB/s) dpkg-name: info: moved 'libxmu6_2%3a1.1.3-3+b4_armhf.deb' to '/srv/rebuilderd/tmp/tmpy7tdhrbw/libxmu6_1.1.3-3+b4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gettext armhf 0.23.1-2 [1560 kB] Fetched 1560 kB in 0s (107 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6i4pcodp/gettext_0.23.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf liblastlog2-2 armhf 2.41-4 [27.7 kB] Fetched 27.7 kB in 0s (1377 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp78rds8ge/liblastlog2-2_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texlive-fonts-recommended all 2024.20250309-1 [4989 kB] Fetched 4989 kB in 0s (149 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp95n5bz63/texlive-fonts-recommended_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libbrotli1 armhf 1.1.0-2+b7 [284 kB] Fetched 284 kB in 0s (19.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0hxssp78/libbrotli1_1.1.0-2+b7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb-dri3-0 armhf 1.17.0-2+b1 [107 kB] Fetched 107 kB in 0s (5387 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpk8qi5d41/libxcb-dri3-0_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtiffxx6 armhf 4.7.0-3 [164 kB] Fetched 164 kB in 0s (8535 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphzlwqvdk/libtiffxx6_4.7.0-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texlive-pictures all 2024.20250309-1 [17.0 MB] Fetched 17.0 MB in 0s (152 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpat4l0usn/texlive-pictures_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dh-strip-nondeterminism all 1.14.1-2 [8620 B] Fetched 8620 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp61rn38dr/dh-strip-nondeterminism_1.14.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf xdg-utils all 1.2.1-2 [75.8 kB] Fetched 75.8 kB in 0s (5999 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp2h6jd6t/xdg-utils_1.2.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdconf1 armhf 0.40.0-5 [37.0 kB] Fetched 37.0 kB in 0s (3371 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqypx9m35/libdconf1_0.40.0-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxfixes3 armhf 1:6.0.0-2+b4 [18.6 kB] Fetched 18.6 kB in 0s (0 B/s) dpkg-name: info: moved 'libxfixes3_1%3a6.0.0-2+b4_armhf.deb' to '/srv/rebuilderd/tmp/tmphggjdf6l/libxfixes3_6.0.0-2+b4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texlive-base all 2024.20250309-1 [23.1 MB] Fetched 23.1 MB in 0s (157 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps3uc8djp/texlive-base_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf openjdk-21-jre-headless armhf 21.0.7+6-1 [35.6 MB] Fetched 35.6 MB in 0s (175 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt8pnr0f2/openjdk-21-jre-headless_21.0.7+6-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf procps armhf 2:4.0.4-8 [867 kB] Fetched 867 kB in 0s (55.1 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-8_armhf.deb' to '/srv/rebuilderd/tmp/tmpcheymd8k/procps_4.0.4-8_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb-shm0 armhf 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (6624 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpie_xmd5x/libxcb-shm0_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtext-unidecode-perl all 1.30-3 [101 kB] Fetched 101 kB in 0s (7047 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv_hwjcru/libtext-unidecode-perl_1.30-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf lmodern all 2.005-1 [9480 kB] Fetched 9480 kB in 0s (87.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmcaklhx7/lmodern_2.005-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libattr1 armhf 1:2.5.2-3 [22.0 kB] Fetched 22.0 kB in 0s (1176 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_armhf.deb' to '/srv/rebuilderd/tmp/tmpkna5gd57/libattr1_2.5.2-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxpm4 armhf 1:3.5.17-1+b3 [50.3 kB] Fetched 50.3 kB in 0s (2818 kB/s) dpkg-name: info: moved 'libxpm4_1%3a3.5.17-1+b3_armhf.deb' to '/srv/rebuilderd/tmp/tmpqtrpkxax/libxpm4_3.5.17-1+b3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgnutls-dane0t64 armhf 3.8.9-2 [446 kB] Fetched 446 kB in 0s (33.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm__lwnwd/libgnutls-dane0t64_3.8.9-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpangoft2-1.0-0 armhf 1.56.3-1 [48.9 kB] Fetched 48.9 kB in 0s (4743 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplmnvpif9/libpangoft2-1.0-0_1.56.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libreadline8t64 armhf 8.2-6 [146 kB] Fetched 146 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn83ob1f1/libreadline8t64_8.2-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgdbm-compat4t64 armhf 1.24-2 [50.0 kB] Fetched 50.0 kB in 0s (2593 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqryvz57k/libgdbm-compat4t64_1.24-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcrypt-dev armhf 1:4.4.38-1 [125 kB] Fetched 125 kB in 0s (10.3 MB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.4.38-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpdykcgqtd/libcrypt-dev_4.4.38-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxaw7 armhf 2:1.0.16-1 [177 kB] Fetched 177 kB in 0s (10.1 MB/s) dpkg-name: info: moved 'libxaw7_2%3a1.0.16-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpxu33str2/libxaw7_1.0.16-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf ncurses-bin armhf 6.5+20250216-2 [429 kB] Fetched 429 kB in 0s (21.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnsbshe33/ncurses-bin_6.5+20250216-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (11.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5fx795y8/debconf_1.5.91_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf fonts-lmodern all 2.005-1 [4540 kB] Fetched 4540 kB in 0s (69.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf0nxhc3c/fonts-lmodern_2.005-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libmpc3 armhf 1.3.1-1+b3 [43.7 kB] Fetched 43.7 kB in 0s (2304 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1eodxljz/libmpc3_1.3.1-1+b3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpcre2-32-0 armhf 10.45-1 [235 kB] Fetched 235 kB in 0s (14.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphiifaohe/libpcre2-32-0_10.45-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libidn2-0 armhf 2.3.8-2 [105 kB] Fetched 105 kB in 0s (2985 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo0ug49wi/libidn2-0_2.3.8-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libssh2-1t64 armhf 1.11.1-1 [227 kB] Fetched 227 kB in 0s (10.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfvs3ol0z/libssh2-1t64_1.11.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsystemd0 armhf 257.5-2 [417 kB] Fetched 417 kB in 0s (30.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv04q3pfm/libsystemd0_257.5-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxft2 armhf 2.3.6-1+b4 [46.4 kB] Fetched 46.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6m5fxs5s/libxft2_2.3.6-1+b4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcursor1 armhf 1:1.2.3-1 [36.2 kB] Fetched 36.2 kB in 0s (2648 kB/s) dpkg-name: info: moved 'libxcursor1_1%3a1.2.3-1_armhf.deb' to '/srv/rebuilderd/tmp/tmp02_mm5y1/libxcursor1_1.2.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libnghttp3-9 armhf 1.8.0-1 [59.9 kB] Fetched 59.9 kB in 0s (4811 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn84a2hj7/libnghttp3-9_1.8.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf systemd armhf 257.5-2 [3031 kB] Fetched 3031 kB in 0s (159 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnak2747x/systemd_257.5-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf xfonts-utils armhf 1:7.7+7 [84.2 kB] Fetched 84.2 kB in 0s (7059 kB/s) dpkg-name: info: moved 'xfonts-utils_1%3a7.7+7_armhf.deb' to '/srv/rebuilderd/tmp/tmpbfhk5bsw/xfonts-utils_7.7+7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf pkgconf-bin armhf 1.8.1-4 [29.2 kB] Fetched 29.2 kB in 0s (2614 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9_7j_f8w/pkgconf-bin_1.8.1-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf base-files armhf 13.7 [72.9 kB] Fetched 72.9 kB in 0s (6078 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdz9_7uv2/base-files_13.7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpam0g armhf 1.7.0-3 [64.3 kB] Fetched 64.3 kB in 0s (1604 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt85pcj_8/libpam0g_1.7.0-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtirpc3t64 armhf 1.3.6+ds-1 [71.5 kB] Fetched 71.5 kB in 0s (4300 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpufih_8aw/libtirpc3t64_1.3.6+ds-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtasn1-6-dev armhf 4.20.0-2 [93.4 kB] Fetched 93.4 kB in 0s (5352 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx81bq6ao/libtasn1-6-dev_4.20.0-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb-present0 armhf 1.17.0-2+b1 [105 kB] Fetched 105 kB in 0s (6165 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptkknryd5/libxcb-present0_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf perl-modules-5.40 all 5.40.1-3 [3021 kB] Fetched 3021 kB in 0s (142 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpywj1vfue/perl-modules-5.40_5.40.1-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpaper2 armhf 2.2.5-0.3+b2 [15.9 kB] Fetched 15.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1uklrgn8/libpaper2_2.2.5-0.3+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libharfbuzz-icu0 armhf 10.2.0-1+b1 [15.3 kB] Fetched 15.3 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdhuaqk3k/libharfbuzz-icu0_10.2.0-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libjpeg62-turbo armhf 1:2.1.5-3.1 [145 kB] Fetched 145 kB in 0s (0 B/s) dpkg-name: info: moved 'libjpeg62-turbo_1%3a2.1.5-3.1_armhf.deb' to '/srv/rebuilderd/tmp/tmpy8ipa1lt/libjpeg62-turbo_2.1.5-3.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf mesa-libgallium armhf 25.0.4-1 [7402 kB] Fetched 7402 kB in 0s (187 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeqvbfg9p/mesa-libgallium_25.0.4-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (1758 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnahsqtwi/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf python3.13 armhf 3.13.3-2 [751 kB] Fetched 751 kB in 0s (58.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnih3utmz/python3.13_3.13.3-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgnutls-openssl27t64 armhf 3.8.9-2 [446 kB] Fetched 446 kB in 0s (35.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplq51g60f/libgnutls-openssl27t64_3.8.9-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libbinutils armhf 2.44-3 [339 kB] Fetched 339 kB in 0s (17.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjby9990g/libbinutils_2.44-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libc6-dev armhf 2.41-7 [1326 kB] Fetched 1326 kB in 0s (79.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp01cza8d4/libc6-dev_2.41-7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libzstd1 armhf 1.5.7+dfsg-1 [264 kB] Fetched 264 kB in 0s (20.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3kj7xavp/libzstd1_1.5.7+dfsg-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf rpcsvc-proto armhf 1.4.3-1 [58.7 kB] Fetched 58.7 kB in 0s (4964 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsgr75v22/rpcsvc-proto_1.4.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texlive-latex-recommended all 2024.20250309-1 [8745 kB] Fetched 8745 kB in 0s (102 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpopt2l0x6/texlive-latex-recommended_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libthai0 armhf 0.1.29-2+b1 [46.0 kB] Fetched 46.0 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmnwxyzdc/libthai0_0.1.29-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpcre2-16-0 armhf 10.45-1 [243 kB] Fetched 243 kB in 0s (15.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfhpg0irg/libpcre2-16-0_10.45-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libwebp7 armhf 1.5.0-0.1 [273 kB] Fetched 273 kB in 0s (18.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzim53d10/libwebp7_1.5.0-0.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf cpp armhf 4:14.2.0-1 [1572 B] Fetched 1572 B in 0s (93.9 kB/s) dpkg-name: info: moved 'cpp_4%3a14.2.0-1_armhf.deb' to '/srv/rebuilderd/tmp/tmp042y3n4i/cpp_14.2.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libwebpdemux2 armhf 1.5.0-0.1 [112 kB] Fetched 112 kB in 0s (8685 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr5w2mkcd/libwebpdemux2_1.5.0-0.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dbus-daemon armhf 1.16.2-2 [146 kB] Fetched 146 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptk79m_ix/dbus-daemon_1.16.2-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf shared-mime-info armhf 2.4-5+b2 [754 kB] Fetched 754 kB in 0s (57.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpj8mhys1v/shared-mime-info_2.4-5+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf fontconfig-config armhf 2.15.0-2.3 [318 kB] Fetched 318 kB in 0s (30.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2c4bbo_0/fontconfig-config_2.15.0-2.3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libhogweed6t64 armhf 3.10.1-1 [322 kB] Fetched 322 kB in 0s (23.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9udrexiv/libhogweed6t64_3.10.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dpkg-dev all 1.22.18 [1338 kB] Fetched 1338 kB in 0s (57.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptx2fy7m5/dpkg-dev_1.22.18_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libharfbuzz-subset0 armhf 10.2.0-1+b1 [492 kB] Fetched 492 kB in 0s (44.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9tr8yaqy/libharfbuzz-subset0_10.2.0-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libwayland-egl1 armhf 1.23.1-3 [5756 B] Fetched 5756 B in 0s (477 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7xleb7wi/libwayland-egl1_1.23.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texlive-latex-extra all 2024.20250309-2 [25.2 MB] Fetched 25.2 MB in 0s (177 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp722sispn/texlive-latex-extra_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdebconfclient0 armhf 0.278 [10.2 kB] Fetched 10.2 kB in 0s (857 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2p77bgz4/libdebconfclient0_0.278_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dbus-session-bus-common all 1.16.2-2 [52.3 kB] Fetched 52.3 kB in 0s (4053 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplazkllf2/dbus-session-bus-common_1.16.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dconf-gsettings-backend armhf 0.40.0-5 [24.1 kB] Fetched 24.1 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4t4erykr/dconf-gsettings-backend_0.40.0-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf binutils-arm-linux-gnueabihf armhf 2.44-3 [833 kB] Fetched 833 kB in 0s (50.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuj17iw_s/binutils-arm-linux-gnueabihf_2.44-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxdmcp-dev armhf 1:1.1.5-1 [42.9 kB] Fetched 42.9 kB in 0s (2587 kB/s) dpkg-name: info: moved 'libxdmcp-dev_1%3a1.1.5-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpiqdn8bhi/libxdmcp-dev_1.1.5-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libteckit0 armhf 2.5.12+ds1-1+b1 [259 kB] Fetched 259 kB in 0s (23.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpku0mj0iu/libteckit0_2.5.12+ds1-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libwayland-cursor0 armhf 1.23.1-3 [10.8 kB] Fetched 10.8 kB in 0s (845 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0u6ih2vz/libwayland-cursor0_1.23.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libaudit-common all 1:4.0.2-2 [12.7 kB] Fetched 12.7 kB in 0s (850 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.0.2-2_all.deb' to '/srv/rebuilderd/tmp/tmp51ya1b63/libaudit-common_4.0.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf java-common all 0.76 [6776 B] Fetched 6776 B in 0s (387 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_7x82bjf/java-common_0.76_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxext6 armhf 2:1.3.4-1+b3 [45.2 kB] Fetched 45.2 kB in 0s (4353 kB/s) dpkg-name: info: moved 'libxext6_2%3a1.3.4-1+b3_armhf.deb' to '/srv/rebuilderd/tmp/tmp9f9cn40g/libxext6_1.3.4-1+b3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdb5.3t64 armhf 5.3.28+dfsg2-9 [602 kB] Fetched 602 kB in 0s (40.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv5x2yooq/libdb5.3t64_5.3.28+dfsg2-9_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libbz2-1.0 armhf 1.0.8-6 [35.0 kB] Fetched 35.0 kB in 0s (2918 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsyu2kv23/libbz2-1.0_1.0.8-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texlive-plain-generic all 2024.20250309-2 [29.0 MB] Fetched 29.0 MB in 0s (226 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmbu51p6v/texlive-plain-generic_2024.20250309-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsm6 armhf 2:1.2.6-1 [35.7 kB] Fetched 35.7 kB in 0s (2284 kB/s) dpkg-name: info: moved 'libsm6_2%3a1.2.6-1_armhf.deb' to '/srv/rebuilderd/tmp/tmp8yg4_798/libsm6_1.2.6-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libncurses6 armhf 6.5+20250216-2 [82.8 kB] Fetched 82.8 kB in 0s (6100 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9tu054a6/libncurses6_6.5+20250216-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libavahi-common-data armhf 0.8-16 [112 kB] Fetched 112 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2y8dbep2/libavahi-common-data_0.8-16_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb1-dev armhf 1.17.0-2+b1 [180 kB] Fetched 180 kB in 0s (15.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9zfhjs1r/libxcb1-dev_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libuchardet0 armhf 0.0.8-1+b2 [65.6 kB] Fetched 65.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcf7mkq50/libuchardet0_0.0.8-1+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libseccomp2 armhf 2.6.0-2 [49.3 kB] Fetched 49.3 kB in 0s (3608 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjqw6ev_k/libseccomp2_2.6.0-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gettext-base armhf 0.23.1-2 [238 kB] Fetched 238 kB in 0s (14.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg2n629ci/gettext-base_0.23.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp41ermqc8/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libjpeg-dev armhf 1:2.1.5-3.1 [72.0 kB] Fetched 72.0 kB in 0s (6550 kB/s) dpkg-name: info: moved 'libjpeg-dev_1%3a2.1.5-3.1_armhf.deb' to '/srv/rebuilderd/tmp/tmps7rmubbl/libjpeg-dev_2.1.5-3.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libmagic1t64 armhf 1:5.46-5 [100 kB] Fetched 100 kB in 0s (9813 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_armhf.deb' to '/srv/rebuilderd/tmp/tmpjgy02xfi/libmagic1t64_5.46-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf adwaita-icon-theme all 48.0-1 [504 kB] Fetched 504 kB in 0s (41.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmcbz_wz_/adwaita-icon-theme_48.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gcc-14-base armhf 14.2.0-19 [49.4 kB] Fetched 49.4 kB in 0s (4880 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxtfke6du/gcc-14-base_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libvulkan1 armhf 1.4.309.0-1 [114 kB] Fetched 114 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgc8cmu3p/libvulkan1_1.4.309.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpython3.13-minimal armhf 3.13.3-2 [847 kB] Fetched 847 kB in 0s (49.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjch32gbv/libpython3.13-minimal_3.13.3-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libssh2-1-dev armhf 1.11.1-1 [378 kB] Fetched 378 kB in 0s (33.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5a49lav0/libssh2-1-dev_1.11.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcloudproviders0 armhf 0.3.6-2 [24.6 kB] Fetched 24.6 kB in 0s (1139 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7bz6cal2/libcloudproviders0_0.3.6-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtool all 2.5.4-4 [539 kB] Fetched 539 kB in 0s (31.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqf28fceh/libtool_2.5.4-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxrender-dev armhf 1:0.9.12-1 [36.1 kB] Fetched 36.1 kB in 0s (3362 kB/s) dpkg-name: info: moved 'libxrender-dev_1%3a0.9.12-1_armhf.deb' to '/srv/rebuilderd/tmp/tmp2k42r49d/libxrender-dev_0.9.12-1_armhf.deb' Downloading dependency 257 of 515: libwayland-server0:armhf=1.23.1-3 Downloading dependency 258 of 515: libkrb5-dev:armhf=1.21.3-5 Downloading dependency 259 of 515: krb5-multidev:armhf=1.21.3-5 Downloading dependency 260 of 515: ca-certificates-java:armhf=20240118 Downloading dependency 261 of 515: libwebpmux3:armhf=1.5.0-0.1 Downloading dependency 262 of 515: libxcb-glx0:armhf=1.17.0-2+b1 Downloading dependency 263 of 515: libgdk-pixbuf2.0-common:armhf=2.42.12+dfsg-2 Downloading dependency 264 of 515: libp11-kit0:armhf=0.25.5-3 Downloading dependency 265 of 515: libxinerama1:armhf=2:1.1.4-3+b4 Downloading dependency 266 of 515: tar:armhf=1.35+dfsg-3.1 Downloading dependency 267 of 515: hostname:armhf=3.25 Downloading dependency 268 of 515: libpcre2-dev:armhf=10.45-1 Downloading dependency 269 of 515: libexpat1-dev:armhf=2.7.1-1 Downloading dependency 270 of 515: libcairo-gobject2:armhf=1.18.4-1+b1 Downloading dependency 271 of 515: texinfo-lib:armhf=7.1.1-1+b1 Downloading dependency 272 of 515: cpp-14-arm-linux-gnueabihf:armhf=14.2.0-19 Downloading dependency 273 of 515: libwebpdecoder3:armhf=1.5.0-0.1 Downloading dependency 274 of 515: xkb-data:armhf=2.42-1 Downloading dependency 275 of 515: libfontenc1:armhf=1:1.1.8-1+b2 Downloading dependency 276 of 515: libubsan1:armhf=14.2.0-19 Downloading dependency 277 of 515: libgcc-s1:armhf=14.2.0-19 Downloading dependency 278 of 515: libtext-charwidth-perl:armhf=0.04-11+b4 Downloading dependency 279 of 515: libudev1:armhf=257.5-2 Downloading dependency 280 of 515: libxmu6:armhf=2:1.1.3-3+b4 Downloading dependency 281 of 515: gettext:armhf=0.23.1-2 Downloading dependency 282 of 515: liblastlog2-2:armhf=2.41-4 Downloading dependency 283 of 515: texlive-fonts-recommended:armhf=2024.20250309-1 Downloading dependency 284 of 515: libbrotli1:armhf=1.1.0-2+b7 Downloading dependency 285 of 515: libxcb-dri3-0:armhf=1.17.0-2+b1 Downloading dependency 286 of 515: libtiffxx6:armhf=4.7.0-3 Downloading dependency 287 of 515: texlive-pictures:armhf=2024.20250309-1 Downloading dependency 288 of 515: dh-strip-nondeterminism:armhf=1.14.1-2 Downloading dependency 289 of 515: xdg-utils:armhf=1.2.1-2 Downloading dependency 290 of 515: libdconf1:armhf=0.40.0-5 Downloading dependency 291 of 515: libxfixes3:armhf=1:6.0.0-2+b4 Downloading dependency 292 of 515: texlive-base:armhf=2024.20250309-1 Downloading dependency 293 of 515: openjdk-21-jre-headless:armhf=21.0.7+6-1 Downloading dependency 294 of 515: procps:armhf=2:4.0.4-8 Downloading dependency 295 of 515: libxcb-shm0:armhf=1.17.0-2+b1 Downloading dependency 296 of 515: libtext-unidecode-perl:armhf=1.30-3 Downloading dependency 297 of 515: lmodern:armhf=2.005-1 Downloading dependency 298 of 515: libattr1:armhf=1:2.5.2-3 Downloading dependency 299 of 515: libxpm4:armhf=1:3.5.17-1+b3 Downloading dependency 300 of 515: libgnutls-dane0t64:armhf=3.8.9-2 Downloading dependency 301 of 515: libpangoft2-1.0-0:armhf=1.56.3-1 Downloading dependency 302 of 515: libreadline8t64:armhf=8.2-6 Downloading dependency 303 of 515: libgdbm-compat4t64:armhf=1.24-2 Downloading dependency 304 of 515: libcrypt-dev:armhf=1:4.4.38-1 Downloading dependency 305 of 515: libxaw7:armhf=2:1.0.16-1 Downloading dependency 306 of 515: ncurses-bin:armhf=6.5+20250216-2 Downloading dependency 307 of 515: debconf:armhf=1.5.91 Downloading dependency 308 of 515: fonts-lmodern:armhf=2.005-1 Downloading dependency 309 of 515: libmpc3:armhf=1.3.1-1+b3 Downloading dependency 310 of 515: libpcre2-32-0:armhf=10.45-1 Downloading dependency 311 of 515: libidn2-0:armhf=2.3.8-2 Downloading dependency 312 of 515: libssh2-1t64:armhf=1.11.1-1 Downloading dependency 313 of 515: libsystemd0:armhf=257.5-2 Downloading dependency 314 of 515: libxft2:armhf=2.3.6-1+b4 Downloading dependency 315 of 515: libxcursor1:armhf=1:1.2.3-1 Downloading dependency 316 of 515: libnghttp3-9:armhf=1.8.0-1 Downloading dependency 317 of 515: systemd:armhf=257.5-2 Downloading dependency 318 of 515: xfonts-utils:armhf=1:7.7+7 Downloading dependency 319 of 515: pkgconf-bin:armhf=1.8.1-4 Downloading dependency 320 of 515: base-files:armhf=13.7 Downloading dependency 321 of 515: libpam0g:armhf=1.7.0-3 Downloading dependency 322 of 515: libtirpc3t64:armhf=1.3.6+ds-1 Downloading dependency 323 of 515: libtasn1-6-dev:armhf=4.20.0-2 Downloading dependency 324 of 515: libxcb-present0:armhf=1.17.0-2+b1 Downloading dependency 325 of 515: perl-modules-5.40:armhf=5.40.1-3 Downloading dependency 326 of 515: libpaper2:armhf=2.2.5-0.3+b2 Downloading dependency 327 of 515: libharfbuzz-icu0:armhf=10.2.0-1+b1 Downloading dependency 328 of 515: libjpeg62-turbo:armhf=1:2.1.5-3.1 Downloading dependency 329 of 515: mesa-libgallium:armhf=25.0.4-1 Downloading dependency 330 of 515: intltool-debian:armhf=0.35.0+20060710.6 Downloading dependency 331 of 515: python3.13:armhf=3.13.3-2 Downloading dependency 332 of 515: libgnutls-openssl27t64:armhf=3.8.9-2 Downloading dependency 333 of 515: libbinutils:armhf=2.44-3 Downloading dependency 334 of 515: libc6-dev:armhf=2.41-7 Downloading dependency 335 of 515: libzstd1:armhf=1.5.7+dfsg-1 Downloading dependency 336 of 515: rpcsvc-proto:armhf=1.4.3-1 Downloading dependency 337 of 515: texlive-latex-recommended:armhf=2024.20250309-1 Downloading dependency 338 of 515: libthai0:armhf=0.1.29-2+b1 Downloading dependency 339 of 515: libpcre2-16-0:armhf=10.45-1 Downloading dependency 340 of 515: libwebp7:armhf=1.5.0-0.1 Downloading dependency 341 of 515: cpp:armhf=4:14.2.0-1 Downloading dependency 342 of 515: libwebpdemux2:armhf=1.5.0-0.1 Downloading dependency 343 of 515: dbus-daemon:armhf=1.16.2-2 Downloading dependency 344 of 515: shared-mime-info:armhf=2.4-5+b2 Downloading dependency 345 of 515: fontconfig-config:armhf=2.15.0-2.3 Downloading dependency 346 of 515: libhogweed6t64:armhf=3.10.1-1 Downloading dependency 347 of 515: dpkg-dev:armhf=1.22.18 Downloading dependency 348 of 515: libharfbuzz-subset0:armhf=10.2.0-1+b1 Downloading dependency 349 of 515: libwayland-egl1:armhf=1.23.1-3 Downloading dependency 350 of 515: texlive-latex-extra:armhf=2024.20250309-2 Downloading dependency 351 of 515: libdebconfclient0:armhf=0.278 Downloading dependency 352 of 515: dbus-session-bus-common:armhf=1.16.2-2 Downloading dependency 353 of 515: dconf-gsettings-backend:armhf=0.40.0-5 Downloading dependency 354 of 515: binutils-arm-linux-gnueabihf:armhf=2.44-3 Downloading dependency 355 of 515: libxdmcp-dev:armhf=1:1.1.5-1 Downloading dependency 356 of 515: libteckit0:armhf=2.5.12+ds1-1+b1 Downloading dependency 357 of 515: libwayland-cursor0:armhf=1.23.1-3 Downloading dependency 358 of 515: libaudit-common:armhf=1:4.0.2-2 Downloading dependency 359 of 515: java-common:armhf=0.76 Downloading dependency 360 of 515: libxext6:armhf=2:1.3.4-1+b3 Downloading dependency 361 of 515: libdb5.3t64:armhf=5.3.28+dfsg2-9 Downloading dependency 362 of 515: libbz2-1.0:armhf=1.0.8-6 Downloading dependency 363 of 515: texlive-plain-generic:armhf=2024.20250309-2 Downloading dependency 364 of 515: libsm6:armhf=2:1.2.6-1 Downloading dependency 365 of 515: libncurses6:armhf=6.5+20250216-2 Downloading dependency 366 of 515: libavahi-common-data:armhf=0.8-16 Downloading dependency 367 of 515: libxcb1-dev:armhf=1.17.0-2+b1 Downloading dependency 368 of 515: libuchardet0:armhf=0.0.8-1+b2 Downloading dependency 369 of 515: libseccomp2:armhf=2.6.0-2 Downloading dependency 370 of 515: gettext-base:armhf=0.23.1-2 Downloading dependency 371 of 515: libarchive-zip-perl:armhf=1.68-1 Downloading dependency 372 of 515: libjpeg-dev:armhf=1:2.1.5-3.1 Downloading dependency 373 of 515: libmagic1t64:armhf=1:5.46-5 Downloading dependency 374 of 515: adwaita-icon-theme:armhf=48.0-1 Downloading dependency 375 of 515: gcc-14-base:armhf=14.2.0-19 Downloading dependency 376 of 515: libvulkan1:armhf=1.4.309.0-1 Downloading dependency 377 of 515: libpython3.13-minimal:armhf=3.13.3-2 Downloading dependency 378 of 515: libssh2-1-dev:armhf=1.11.1-1 Downloading dependency 379 of 515: libcloudproviders0:armhf=0.3.6-2 Downloading dependency 380 of 515: libtool:armhf=2.5.4-4 Downloading dependency 381 of 515: libxrender-dev:armhf=1:0.9.12-1 Downloading dependency 382 of 515: libxdmcp6:armhf=1:1.1.5-1Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxdmcp6 armhf 1:1.1.5-1 [26.4 kB] Fetched 26.4 kB in 0s (0 B/s) dpkg-name: info: moved 'libxdmcp6_1%3a1.1.5-1_armhf.deb' to '/srv/rebuilderd/tmp/tmplhr6f4ur/libxdmcp6_1.1.5-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libglx0 armhf 1.7.0-1+b2 [32.6 kB] Fetched 32.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr9qesvu5/libglx0_1.7.0-1+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf diffutils armhf 1:3.10-4 [369 kB] Fetched 369 kB in 0s (24.2 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.10-4_armhf.deb' to '/srv/rebuilderd/tmp/tmpz56savni/diffutils_3.10-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpkgconf3 armhf 1.8.1-4 [31.8 kB] Fetched 31.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyv1aprqm/libpkgconf3_1.8.1-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b5 [53.2 kB] Fetched 53.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuzce0gyt/librtmp1_2.4+20151223.gitfa8646d.1-2+b5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libacl1 armhf 2.3.2-2+b1 [30.0 kB] Fetched 30.0 kB in 0s (1705 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplov1m0it/libacl1_2.3.2-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf g++-14-arm-linux-gnueabihf armhf 14.2.0-19 [9063 kB] Fetched 9063 kB in 0s (189 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpig76e9th/g++-14-arm-linux-gnueabihf_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgio-2.0-dev armhf 2.84.1-2 [1568 kB] Fetched 1568 kB in 0s (97.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbvdnr11i/libgio-2.0-dev_2.84.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsepol-dev armhf 3.8.1-1 [340 kB] Fetched 340 kB in 0s (30.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptlbr6syf/libsepol-dev_3.8.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf default-jdk-headless armhf 2:1.21-76 [1124 B] Fetched 1124 B in 0s (78.6 kB/s) dpkg-name: info: moved 'default-jdk-headless_2%3a1.21-76_armhf.deb' to '/srv/rebuilderd/tmp/tmpo32z442k/default-jdk-headless_1.21-76_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libapparmor1 armhf 4.1.0-1 [39.3 kB] Fetched 39.3 kB in 0s (3899 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7_y9qws7/libapparmor1_4.1.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsombok3 armhf 2.4.0-2+b2 [27.4 kB] Fetched 27.4 kB in 0s (1487 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx_asgvc6/libsombok3_2.4.0-2+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf default-jre-headless armhf 2:1.21-76 [3192 B] Fetched 3192 B in 0s (141 kB/s) dpkg-name: info: moved 'default-jre-headless_2%3a1.21-76_armhf.deb' to '/srv/rebuilderd/tmp/tmpc3jflea6/default-jre-headless_1.21-76_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf liblcms2-2 armhf 2.16-2 [131 kB] Fetched 131 kB in 0s (10.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf8gqo43v/liblcms2-2_2.16-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libkadm5srv-mit12 armhf 1.21.3-5 [47.6 kB] Fetched 47.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpep08uiav/libkadm5srv-mit12_1.21.3-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtiff6 armhf 4.7.0-3 [321 kB] Fetched 321 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3rk98s70/libtiff6_4.7.0-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf x11proto-dev all 2024.1-1 [603 kB] Fetched 603 kB in 0s (40.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6y5d5d7q/x11proto-dev_2024.1-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfribidi0 armhf 1.0.16-1 [24.6 kB] Fetched 24.6 kB in 0s (1492 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx58_eqqv/libfribidi0_1.0.16-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libasound2t64 armhf 1.2.14-1 [322 kB] Fetched 322 kB in 0s (17.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ywhg0kg/libasound2t64_1.2.14-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dbus-system-bus-common all 1.16.2-2 [53.5 kB] Fetched 53.5 kB in 0s (4265 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5lueneny/dbus-system-bus-common_1.16.2-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdpkg-perl all 1.22.18 [649 kB] Fetched 649 kB in 0s (43.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr3f2qxnh/libdpkg-perl_1.22.18_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpsl-dev armhf 0.21.2-1.1+b1 [76.8 kB] Fetched 76.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfo1cb21p/libpsl-dev_0.21.2-1.1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libharfbuzz-dev armhf 10.2.0-1+b1 [145 kB] Fetched 145 kB in 0s (8441 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr2k6vjjy/libharfbuzz-dev_10.2.0-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf build-essential armhf 12.12 [4624 B] Fetched 4624 B in 0s (279 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp45li51bz/build-essential_12.12_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libatk1.0-0t64 armhf 2.56.2-1 [44.9 kB] Fetched 44.9 kB in 0s (2903 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppluxzmel/libatk1.0-0t64_2.56.2-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf nettle-dev armhf 3.10.1-1 [1314 kB] Fetched 1314 kB in 0s (43.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp24pcxe_x/nettle-dev_3.10.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libperl5.40 armhf 5.40.1-3 [3606 kB] Fetched 3606 kB in 0s (110 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsyxat6gm/libperl5.40_5.40.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gir1.2-glib-2.0-dev armhf 2.84.1-2 [914 kB] Fetched 914 kB in 0s (75.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfs57sjmy/gir1.2-glib-2.0-dev_2.84.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB] Fetched 905 kB in 0s (69.3 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_armhf.deb' to '/srv/rebuilderd/tmp/tmpnmj9dhsn/zlib1g-dev_1.3.dfsg+really1.3.1-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libmount-dev armhf 2.41-4 [30.5 kB] Fetched 30.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqvdwu5pr/libmount-dev_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf xauth armhf 1:1.1.2-1.1 [33.1 kB] Fetched 33.1 kB in 0s (3275 kB/s) dpkg-name: info: moved 'xauth_1%3a1.1.2-1.1_armhf.deb' to '/srv/rebuilderd/tmp/tmprknhyong/xauth_1.1.2-1.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gfortran-arm-linux-gnueabihf armhf 4:14.2.0-1 [1288 B] Fetched 1288 B in 0s (0 B/s) dpkg-name: info: moved 'gfortran-arm-linux-gnueabihf_4%3a14.2.0-1_armhf.deb' to '/srv/rebuilderd/tmp/tmp5w0myknd/gfortran-arm-linux-gnueabihf_14.2.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgmp10 armhf 2:6.3.0+dfsg-3 [512 kB] Fetched 512 kB in 0s (44.0 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-3_armhf.deb' to '/srv/rebuilderd/tmp/tmp4fab5vg2/libgmp10_6.3.0+dfsg-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libglib2.0-dev armhf 2.84.1-2 [53.7 kB] Fetched 53.7 kB in 0s (3671 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp42y2ey1p/libglib2.0-dev_2.84.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf liblerc-dev armhf 4.0.0+ds-5 [163 kB] Fetched 163 kB in 0s (8645 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5fmetb_3/liblerc-dev_4.0.0+ds-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libffi8 armhf 3.4.8-2 [20.4 kB] Fetched 20.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7rhy2jgt/libffi8_3.4.8-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libmpfi0 armhf 1.5.4+ds-4 [28.8 kB] Fetched 28.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplxzewsfg/libmpfi0_1.5.4+ds-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libctf-nobfd0 armhf 2.44-3 [128 kB] Fetched 128 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2dgh84q9/libctf-nobfd0_2.44-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libx11-data all 2:1.8.12-1 [343 kB] Fetched 343 kB in 0s (0 B/s) dpkg-name: info: moved 'libx11-data_2%3a1.8.12-1_all.deb' to '/srv/rebuilderd/tmp/tmpfgk2avne/libx11-data_1.8.12-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdrm2 armhf 2.4.124-2 [34.5 kB] Fetched 34.5 kB in 0s (3351 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4k0xghyz/libdrm2_2.4.124-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf liblzo2-2 armhf 2.10-3+b1 [48.5 kB] Fetched 48.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwx6eljz0/liblzo2-2_2.10-3+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf patch armhf 2.8-1 [128 kB] Fetched 128 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr0lcv6c1/patch_2.8-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpotrace0 armhf 1.16-2+b2 [22.7 kB] Fetched 22.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplyado4nb/libpotrace0_1.16-2+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdbus-1-3 armhf 1.16.2-2 [155 kB] Fetched 155 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1e19o143/libdbus-1-3_1.16.2-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdatrie-dev armhf 0.2.13-3+b1 [15.2 kB] Fetched 15.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbz2visef/libdatrie-dev_0.2.13-3+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf automake all 1:1.17-4 [862 kB] Fetched 862 kB in 0s (53.8 MB/s) dpkg-name: info: moved 'automake_1%3a1.17-4_all.deb' to '/srv/rebuilderd/tmp/tmpa3jmd0ko/automake_1.17-4_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf openjdk-21-jdk-headless armhf 21.0.7+6-1 [78.4 MB] Fetched 78.4 MB in 0s (249 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbwnd8h9h/openjdk-21-jdk-headless_21.0.7+6-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf openssl-provider-legacy armhf 3.5.0-1 [298 kB] Fetched 298 kB in 0s (27.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnlyictom/openssl-provider-legacy_3.5.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libmagic-mgc armhf 1:5.46-5 [338 kB] Fetched 338 kB in 0s (16.3 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_armhf.deb' to '/srv/rebuilderd/tmp/tmpaky850ct/libmagic-mgc_5.46-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gir1.2-freedesktop-dev armhf 1.84.0-1 [51.6 kB] Fetched 51.6 kB in 0s (3561 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzw7oswjb/gir1.2-freedesktop-dev_1.84.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxt-dev armhf 1:1.2.1-1.2+b2 [386 kB] Fetched 386 kB in 0s (22.0 MB/s) dpkg-name: info: moved 'libxt-dev_1%3a1.2.1-1.2+b2_armhf.deb' to '/srv/rebuilderd/tmp/tmpat2nrwze/libxt-dev_1.2.1-1.2+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgmpxx4ldbl armhf 2:6.3.0+dfsg-3 [328 kB] Fetched 328 kB in 0s (20.6 MB/s) dpkg-name: info: moved 'libgmpxx4ldbl_2%3a6.3.0+dfsg-3_armhf.deb' to '/srv/rebuilderd/tmp/tmpwybdh37x/libgmpxx4ldbl_6.3.0+dfsg-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf liblapack-dev armhf 3.12.1-2 [1935 kB] Fetched 1935 kB in 0s (123 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6jy7hrjl/liblapack-dev_3.12.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf bsdextrautils armhf 2.41-4 [86.5 kB] Fetched 86.5 kB in 0s (7856 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp17qftsvj/bsdextrautils_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-5 [116 kB] Fetched 116 kB in 0s (6249 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpu9rhpkmk/libgssapi-krb5-2_1.21.3-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf x11-xkb-utils armhf 7.7+9 [145 kB] Fetched 145 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph1v544kp/x11-xkb-utils_7.7+9_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf xserver-common all 2:21.1.16-1 [2409 kB] Fetched 2409 kB in 0s (115 MB/s) dpkg-name: info: moved 'xserver-common_2%3a21.1.16-1_all.deb' to '/srv/rebuilderd/tmp/tmpm9pj1jo7/xserver-common_21.1.16-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdeflate-dev armhf 1.23-2 [44.6 kB] Fetched 44.6 kB in 0s (4328 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphhk7idsc/libdeflate-dev_1.23-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf liblzma5 armhf 5.8.1-1 [296 kB] Fetched 296 kB in 0s (27.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkflt90la/liblzma5_5.8.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf python3-packaging all 25.0-1 [56.6 kB] Fetched 56.6 kB in 0s (5042 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_kys08o/python3-packaging_25.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libglib2.0-bin armhf 2.84.1-2 [122 kB] Fetched 122 kB in 0s (9687 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbijajr1h/libglib2.0-bin_2.84.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpam-modules-bin armhf 1.7.0-3 [44.9 kB] Fetched 44.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2n9pm61w/libpam-modules-bin_1.7.0-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpango1.0-dev armhf 1.56.3-1 [155 kB] Fetched 155 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt6m5kp8i/libpango1.0-dev_1.56.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libfreetype6 armhf 2.13.3+dfsg-1 [385 kB] Fetched 385 kB in 0s (37.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6hzt0bsd/libfreetype6_2.13.3+dfsg-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcb-sync1 armhf 1.17.0-2+b1 [108 kB] Fetched 108 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkkdw_mev/libxcb-sync1_1.17.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf sed armhf 4.9-2 [321 kB] Fetched 321 kB in 0s (28.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_mey0kgu/sed_4.9-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgio-2.0-dev-bin armhf 2.84.1-2 [162 kB] Fetched 162 kB in 0s (15.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4auo58oj/libgio-2.0-dev-bin_2.84.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libjansson4 armhf 2.14-2+b3 [35.5 kB] Fetched 35.5 kB in 0s (2316 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjgu2zxch/libjansson4_2.14-2+b3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsframe1 armhf 2.44-3 [75.8 kB] Fetched 75.8 kB in 0s (2601 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgz1yf67c/libsframe1_2.44-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libatomic1 armhf 14.2.0-19 [7200 B] Fetched 7200 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpitigww6b/libatomic1_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf ncurses-base all 6.5+20250216-2 [273 kB] Fetched 273 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnf1jlv80/ncurses-base_6.5+20250216-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtasn1-6 armhf 4.20.0-2 [44.4 kB] Fetched 44.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9b4v409b/libtasn1-6_4.20.0-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf liblerc4 armhf 4.0.0+ds-5 [146 kB] Fetched 146 kB in 0s (9509 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ycnvnmn/liblerc4_4.0.0+ds-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libunbound8 armhf 1.22.0-1+b1 [539 kB] Fetched 539 kB in 0s (48.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx4vksysm/libunbound8_1.22.0-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-9 [18.5 kB] Fetched 18.5 kB in 0s (1793 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_i9rasw3/libsasl2-modules-db_2.1.28+dfsg1-9_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libldap2 armhf 2.6.9+dfsg-2 [168 kB] Fetched 168 kB in 0s (9720 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph4hr69k_/libldap2_2.6.9+dfsg-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf g++-14 armhf 14.2.0-19 [22.5 kB] Fetched 22.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpx8lo71ye/g++-14_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libbrotli-dev armhf 1.1.0-2+b7 [294 kB] Fetched 294 kB in 0s (28.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpw0spuogn/libbrotli-dev_1.1.0-2+b7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdrm-common all 2.4.124-2 [8288 B] Fetched 8288 B in 0s (426 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgfvbqff_/libdrm-common_2.4.124-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf xfonts-base all 1:1.0.5+nmu1 [5895 kB] Fetched 5895 kB in 0s (144 MB/s) dpkg-name: info: moved 'xfonts-base_1%3a1.0.5+nmu1_all.deb' to '/srv/rebuilderd/tmp/tmpqo8osc2s/xfonts-base_1.0.5+nmu1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgdbm6t64 armhf 1.24-2 [71.1 kB] Fetched 71.1 kB in 0s (5545 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6c7_qr7e/libgdbm6t64_1.24-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxrandr2 armhf 2:1.5.4-1+b3 [33.2 kB] Fetched 33.2 kB in 0s (3118 kB/s) dpkg-name: info: moved 'libxrandr2_2%3a1.5.4-1+b3_armhf.deb' to '/srv/rebuilderd/tmp/tmp67_r3cep/libxrandr2_1.5.4-1+b3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libncursesw6 armhf 6.5+20250216-2 [110 kB] Fetched 110 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprmf27rmk/libncursesw6_6.5+20250216-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf x11proto-core-dev all 2024.1-1 [3312 B] Fetched 3312 B in 0s (311 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph_mgyfbb/x11proto-core-dev_2024.1-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libx11-dev armhf 2:1.8.12-1 [836 kB] Fetched 836 kB in 0s (72.5 MB/s) dpkg-name: info: moved 'libx11-dev_2%3a1.8.12-1_armhf.deb' to '/srv/rebuilderd/tmp/tmp7ncdt2x5/libx11-dev_1.8.12-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsmartcols1 armhf 2.41-4 [127 kB] Fetched 127 kB in 0s (12.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqmovzppk/libsmartcols1_2.41-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxau-dev armhf 1:1.0.11-1 [23.0 kB] Fetched 23.0 kB in 0s (0 B/s) dpkg-name: info: moved 'libxau-dev_1%3a1.0.11-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpcxbcv830/libxau-dev_1.0.11-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf default-jre armhf 2:1.21-76 [1068 B] Fetched 1068 B in 0s (71.3 kB/s) dpkg-name: info: moved 'default-jre_2%3a1.21-76_armhf.deb' to '/srv/rebuilderd/tmp/tmpq3l34sln/default-jre_1.21-76_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libharfbuzz-gobject0 armhf 10.2.0-1+b1 [30.9 kB] Fetched 30.9 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc2dpgbmp/libharfbuzz-gobject0_10.2.0-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libelf1t64 armhf 0.192-4 [184 kB] Fetched 184 kB in 0s (15.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp65vsepmc/libelf1t64_0.192-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libice6 armhf 2:1.1.1-1 [58.5 kB] Fetched 58.5 kB in 0s (0 B/s) dpkg-name: info: moved 'libice6_2%3a1.1.1-1_armhf.deb' to '/srv/rebuilderd/tmp/tmp6m3201av/libice6_1.1.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpcsclite1 armhf 2.3.3-1 [51.8 kB] Fetched 51.8 kB in 0s (3922 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3cy1tx2m/libpcsclite1_2.3.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxcomposite1 armhf 1:0.4.6-1 [15.8 kB] Fetched 15.8 kB in 0s (0 B/s) dpkg-name: info: moved 'libxcomposite1_1%3a0.4.6-1_armhf.deb' to '/srv/rebuilderd/tmp/tmppj3c8qx5/libxcomposite1_0.4.6-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libwayland-client0 armhf 1.23.1-3 [21.5 kB] Fetched 21.5 kB in 0s (2083 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpker3shrc/libwayland-client0_1.23.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Fetched 106 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_codqjb7/dwz_0.15-1+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf fonts-dejavu-core all 2.37-8 [840 kB] Fetched 840 kB in 0s (61.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyvflqedx/fonts-dejavu-core_2.37-8_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libselinux1-dev armhf 3.8.1-1 [162 kB] Fetched 162 kB in 0s (8593 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmraxqa1i/libselinux1-dev_3.8.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtirpc-common all 1.3.6+ds-1 [11.0 kB] Fetched 11.0 kB in 0s (249 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9ox5efu5/libtirpc-common_1.3.6+ds-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxrender1 armhf 1:0.9.12-1 [25.0 kB] Fetched 25.0 kB in 0s (0 B/s) dpkg-name: info: moved 'libxrender1_1%3a0.9.12-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpnyv6slx7/libxrender1_0.9.12-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Fetched 1382 kB in 0s (86.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjrik8h89/man-db_2.13.0-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsharpyuv-dev armhf 1.5.0-0.1 [117 kB] Fetched 117 kB in 0s (11.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9kvbs9ja/libsharpyuv-dev_1.5.0-0.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libctf0 armhf 2.44-3 [61.6 kB] Fetched 61.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz2ksbutb/libctf0_2.44-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcolord2 armhf 1.4.7-3 [121 kB] Fetched 121 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp66ltr2qz/libcolord2_1.4.7-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxml-libxml-perl armhf 2.0207+dfsg+really+2.0134-5+b2 [298 kB] Fetched 298 kB in 0s (11.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8n146lm7/libxml-libxml-perl_2.0207+dfsg+really+2.0134-5+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libnspr4 armhf 2:4.36-1 [87.8 kB] Fetched 87.8 kB in 0s (4428 kB/s) dpkg-name: info: moved 'libnspr4_2%3a4.36-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpl496y2jd/libnspr4_4.36-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpython3-stdlib armhf 3.13.3-1 [10.2 kB] Fetched 10.2 kB in 0s (766 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcnh1_pia/libpython3-stdlib_3.13.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libxkbfile1 armhf 1:1.1.0-1+b4 [66.4 kB] Fetched 66.4 kB in 0s (4855 kB/s) dpkg-name: info: moved 'libxkbfile1_1%3a1.1.0-1+b4_armhf.deb' to '/srv/rebuilderd/tmp/tmprxnauy51/libxkbfile1_1.1.0-1+b4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libpam-systemd armhf 257.5-2 [270 kB] Fetched 270 kB in 0s (23.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5ooqbrp4/libpam-systemd_257.5-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf pango1.0-tools armhf 1.56.3-1 [40.2 kB] Fetched 40.2 kB in 0s (2381 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm08ti71i/pango1.0-tools_1.56.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-9 [50.4 kB] Fetched 50.4 kB in 0s (4402 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfkv37_gj/libsasl2-2_2.1.28+dfsg1-9_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf at-spi2-common all 2.56.2-1 [171 kB] Fetched 171 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpehl83fk_/at-spi2-common_2.56.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf tk8.6-dev armhf 8.6.16-1 [726 kB] Fetched 726 kB in 0s (31.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzh7q2o85/tk8.6-dev_8.6.16-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf grep armhf 3.11-4 [420 kB] Fetched 420 kB in 0s (30.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpphmfwzey/grep_3.11-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libblas3 armhf 3.12.1-2 [116 kB] Fetched 116 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxlx3c04u/libblas3_3.12.1-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libsharpyuv0 armhf 1.5.0-0.1 [114 kB] Fetched 114 kB in 0s (8066 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp47qowj5z/libsharpyuv0_1.5.0-0.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gir1.2-pango-1.0 armhf 1.56.3-1 [39.1 kB] Fetched 39.1 kB in 0s (2714 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpc2i0vjiu/gir1.2-pango-1.0_1.56.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libgl1-mesa-dri armhf 25.0.4-1 [42.9 kB] Fetched 42.9 kB in 0s (2434 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1qn_khp_/libgl1-mesa-dri_25.0.4-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtinfo6 armhf 6.5+20250216-2 [333 kB] Fetched 333 kB in 0s (21.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp54pcy78/libtinfo6_6.5+20250216-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf xtrans-dev all 1.4.0-1 [98.7 kB] Fetched 98.7 kB in 0s (6474 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4ag3_k8d/xtrans-dev_1.4.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libreadline-dev armhf 8.2-6 [138 kB] Fetched 138 kB in 0s (8967 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp268kuc17/libreadline-dev_8.2-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libstdc++6 armhf 14.2.0-19 [607 kB] Fetched 607 kB in 0s (36.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp093v2wfg/libstdc++6_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf texlive-luatex all 2024.20250309-1 [29.1 MB] Fetched 29.1 MB in 0s (180 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpslwkm0id/texlive-luatex_2024.20250309-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (2616 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcwg72l23/autotools-dev_20240727.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libharfbuzz-cairo0 armhf 10.2.0-1+b1 [40.1 kB] Fetched 40.1 kB in 0s (3719 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmparb8wikh/libharfbuzz-cairo0_10.2.0-1+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf gfortran-14 armhf 14.2.0-19 [14.5 kB] Fetched 14.5 kB in 0s (1068 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmdv4ly0o/gfortran-14_14.2.0-19_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdatrie1 armhf 0.2.13-3+b1 [34.7 kB] Fetched 34.7 kB in 0s (1279 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp78pys5dn/libdatrie1_0.2.13-3+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf cpp-14 armhf 14.2.0-19 [1280 B] Fetched 1280 B in 0s (97.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpum1fms5p/cpp-14_14.2.0-19_armhf.deb' Downloading dependency 383 of 515: libglx0:armhf=1.7.0-1+b2 Downloading dependency 384 of 515: diffutils:armhf=1:3.10-4 Downloading dependency 385 of 515: libpkgconf3:armhf=1.8.1-4 Downloading dependency 386 of 515: librtmp1:armhf=2.4+20151223.gitfa8646d.1-2+b5 Downloading dependency 387 of 515: libacl1:armhf=2.3.2-2+b1 Downloading dependency 388 of 515: g++-14-arm-linux-gnueabihf:armhf=14.2.0-19 Downloading dependency 389 of 515: libgio-2.0-dev:armhf=2.84.1-2 Downloading dependency 390 of 515: libsepol-dev:armhf=3.8.1-1 Downloading dependency 391 of 515: default-jdk-headless:armhf=2:1.21-76 Downloading dependency 392 of 515: libapparmor1:armhf=4.1.0-1 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515: libperl5.40:armhf=5.40.1-3 Downloading dependency 409 of 515: gir1.2-glib-2.0-dev:armhf=2.84.1-2 Downloading dependency 410 of 515: zlib1g-dev:armhf=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 411 of 515: libmount-dev:armhf=2.41-4 Downloading dependency 412 of 515: xauth:armhf=1:1.1.2-1.1 Downloading dependency 413 of 515: gfortran-arm-linux-gnueabihf:armhf=4:14.2.0-1 Downloading dependency 414 of 515: libgmp10:armhf=2:6.3.0+dfsg-3 Downloading dependency 415 of 515: libglib2.0-dev:armhf=2.84.1-2 Downloading dependency 416 of 515: liblerc-dev:armhf=4.0.0+ds-5 Downloading dependency 417 of 515: libffi8:armhf=3.4.8-2 Downloading dependency 418 of 515: libmpfi0:armhf=1.5.4+ds-4 Downloading dependency 419 of 515: libctf-nobfd0:armhf=2.44-3 Downloading dependency 420 of 515: libx11-data:armhf=2:1.8.12-1 Downloading dependency 421 of 515: libdrm2:armhf=2.4.124-2 Downloading dependency 422 of 515: liblzo2-2:armhf=2.10-3+b1 Downloading dependency 423 of 515: patch:armhf=2.8-1 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Downloading dependency 439 of 515: libdeflate-dev:armhf=1.23-2 Downloading dependency 440 of 515: liblzma5:armhf=5.8.1-1 Downloading dependency 441 of 515: python3-packaging:armhf=25.0-1 Downloading dependency 442 of 515: libglib2.0-bin:armhf=2.84.1-2 Downloading dependency 443 of 515: libpam-modules-bin:armhf=1.7.0-3 Downloading dependency 444 of 515: libpango1.0-dev:armhf=1.56.3-1 Downloading dependency 445 of 515: libfreetype6:armhf=2.13.3+dfsg-1 Downloading dependency 446 of 515: libxcb-sync1:armhf=1.17.0-2+b1 Downloading dependency 447 of 515: sed:armhf=4.9-2 Downloading dependency 448 of 515: libgio-2.0-dev-bin:armhf=2.84.1-2 Downloading dependency 449 of 515: libjansson4:armhf=2.14-2+b3 Downloading dependency 450 of 515: libsframe1:armhf=2.44-3 Downloading dependency 451 of 515: libatomic1:armhf=14.2.0-19 Downloading dependency 452 of 515: ncurses-base:armhf=6.5+20250216-2 Downloading dependency 453 of 515: libtasn1-6:armhf=4.20.0-2 Downloading dependency 454 of 515: liblerc4:armhf=4.0.0+ds-5 Downloading dependency 455 of 515: libunbound8:armhf=1.22.0-1+b1 Downloading dependency 456 of 515: libsasl2-modules-db:armhf=2.1.28+dfsg1-9 Downloading dependency 457 of 515: libldap2:armhf=2.6.9+dfsg-2 Downloading dependency 458 of 515: g++-14:armhf=14.2.0-19 Downloading dependency 459 of 515: libbrotli-dev:armhf=1.1.0-2+b7 Downloading dependency 460 of 515: libdrm-common:armhf=2.4.124-2 Downloading dependency 461 of 515: xfonts-base:armhf=1:1.0.5+nmu1 Downloading dependency 462 of 515: libgdbm6t64:armhf=1.24-2 Downloading dependency 463 of 515: libxrandr2:armhf=2:1.5.4-1+b3 Downloading dependency 464 of 515: libncursesw6:armhf=6.5+20250216-2 Downloading dependency 465 of 515: x11proto-core-dev:armhf=2024.1-1 Downloading dependency 466 of 515: libx11-dev:armhf=2:1.8.12-1 Downloading dependency 467 of 515: libsmartcols1:armhf=2.41-4 Downloading dependency 468 of 515: libxau-dev:armhf=1:1.0.11-1 Downloading dependency 469 of 515: default-jre:armhf=2:1.21-76 Downloading dependency 470 of 515: libharfbuzz-gobject0:armhf=10.2.0-1+b1 Downloading dependency 471 of 515: libelf1t64:armhf=0.192-4 Downloading dependency 472 of 515: libice6:armhf=2:1.1.1-1 Downloading dependency 473 of 515: libpcsclite1:armhf=2.3.3-1 Downloading dependency 474 of 515: libxcomposite1:armhf=1:0.4.6-1 Downloading dependency 475 of 515: libwayland-client0:armhf=1.23.1-3 Downloading dependency 476 of 515: dwz:armhf=0.15-1+b2 Downloading dependency 477 of 515: fonts-dejavu-core:armhf=2.37-8 Downloading dependency 478 of 515: libselinux1-dev:armhf=3.8.1-1 Downloading dependency 479 of 515: libtirpc-common:armhf=1.3.6+ds-1 Downloading dependency 480 of 515: libxrender1:armhf=1:0.9.12-1 Downloading dependency 481 of 515: man-db:armhf=2.13.0-1 Downloading dependency 482 of 515: libsharpyuv-dev:armhf=1.5.0-0.1 Downloading dependency 483 of 515: libctf0:armhf=2.44-3 Downloading dependency 484 of 515: libcolord2:armhf=1.4.7-3 Downloading dependency 485 of 515: libxml-libxml-perl:armhf=2.0207+dfsg+really+2.0134-5+b2 Downloading dependency 486 of 515: libnspr4:armhf=2:4.36-1 Downloading dependency 487 of 515: libpython3-stdlib:armhf=3.13.3-1 Downloading dependency 488 of 515: libxkbfile1:armhf=1:1.1.0-1+b4 Downloading dependency 489 of 515: libpam-systemd:armhf=257.5-2 Downloading dependency 490 of 515: pango1.0-tools:armhf=1.56.3-1 Downloading dependency 491 of 515: libsasl2-2:armhf=2.1.28+dfsg1-9 Downloading dependency 492 of 515: at-spi2-common:armhf=2.56.2-1 Downloading dependency 493 of 515: tk8.6-dev:armhf=8.6.16-1 Downloading dependency 494 of 515: grep:armhf=3.11-4 Downloading dependency 495 of 515: libblas3:armhf=3.12.1-2 Downloading dependency 496 of 515: libsharpyuv0:armhf=1.5.0-0.1 Downloading dependency 497 of 515: gir1.2-pango-1.0:armhf=1.56.3-1 Downloading dependency 498 of 515: libgl1-mesa-dri:armhf=25.0.4-1 Downloading dependency 499 of 515: libtinfo6:armhf=6.5+20250216-2 Downloading dependency 500 of 515: xtrans-dev:armhf=1.4.0-1 Downloading dependency 501 of 515: libreadline-dev:armhf=8.2-6 Downloading dependency 502 of 515: libstdc++6:armhf=14.2.0-19 Downloading dependency 503 of 515: texlive-luatex:armhf=2024.20250309-1 Downloading dependency 504 of 515: autotools-dev:armhf=20240727.1 Downloading dependency 505 of 515: libharfbuzz-cairo0:armhf=10.2.0-1+b1 Downloading dependency 506 of 515: gfortran-14:armhf=14.2.0-19 Downloading dependency 507 of 515: libdatrie1:armhf=0.2.13-3+b1 Downloading dependency 508 of 515: cpp-14:armhf=14.2.0-19 Downloading dependency 509 of 515: autopoint:armhf=0.23.1-2Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf autopoint all 0.23.1-2 [770 kB] Fetched 770 kB in 0s (30.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpv_3ccuz5/autopoint_0.23.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libcrypt1 armhf 1:4.4.38-1 [95.6 kB] Fetched 95.6 kB in 0s (8524 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.4.38-1_armhf.deb' to '/srv/rebuilderd/tmp/tmp5e1shegj/libcrypt1_4.4.38-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libffi-dev armhf 3.4.8-2 [56.2 kB] Fetched 56.2 kB in 0s (3713 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa3kvrgf8/libffi-dev_3.4.8-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf binutils armhf 2.44-3 [69.1 kB] Fetched 69.1 kB in 0s (1345 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpunv2iyr_/binutils_2.44-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libdrm-amdgpu1 armhf 2.4.124-2 [20.7 kB] Fetched 20.7 kB in 0s (1830 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy8enjwgs/libdrm-amdgpu1_2.4.124-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf python3-minimal armhf 3.13.3-1 [27.2 kB] Fetched 27.2 kB in 0s (2210 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcjlhcuyz/python3-minimal_3.13.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20250509T030417Z trixie/main armhf libtcl8.6 armhf 8.6.16+dfsg-1 [934 kB] Fetched 934 kB in 0s (72.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa5qqmzm5/libtcl8.6_8.6.16+dfsg-1_armhf.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_arm64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpzb7pfzn9/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: armhf is different from arm64 but can be executed natively I: using /srv/rebuilderd/tmp/mmdebstrap.4TnpImDcny as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.4TnpImDcny 127.0.0.1 - - [21/Jul/2025 16:21:14] code 404, message File not found 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:44141 ./ InRelease 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:44141 ./ Release [462 B] 127.0.0.1 - - [21/Jul/2025 16:21:14] code 404, message File not found 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:44141 ./ Release.gpg 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:44141 ./ Packages [805 kB] Fetched 805 kB in 0s (16.7 MB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./gcc-14-base_14.2.0-19_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libc6_2.41-7_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libgcc-s1_14.2.0-19_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./mawk_1.3.4.20250131-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./base-files_13.7_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libtinfo6_6.5%2b20250216-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./debianutils_5.22_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./bash_5.2.37-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libcap2_2.75-7_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libsystemd0_257.5-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./bsdutils_2.41-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libacl1_2.3.2-2%2bb1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libattr1_2.5.2-3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libgmp10_6.3.0%2bdfsg-3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libpcre2-8-0_10.45-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libselinux1_3.8.1-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libzstd1_1.5.7%2bdfsg-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./zlib1g_1.3.dfsg%2breally1.3.1-1%2bb1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./libssl3t64_3.5.0-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./openssl-provider-legacy_3.5.0-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:14] "GET /./coreutils_9.7-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./dash_0.5.12-12_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./diffutils_3.10-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libbz2-1.0_1.0.8-6_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./liblzma5_5.8.1-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libmd0_1.1.0-2%2bb1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./tar_1.35%2bdfsg-3.1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./dpkg_1.22.18_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./findutils_4.10.0-3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./grep_3.11-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./gzip_1.13-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./hostname_3.25_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./ncurses-bin_6.5%2b20250216-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libcrypt1_4.4.38-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./perl-base_5.40.1-3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./sed_4.9-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libaudit-common_4.0.2-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libcap-ng0_0.8.5-4%2bb1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libaudit1_4.0.2-2%2bb2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libdb5.3t64_5.3.28%2bdfsg2-9_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./debconf_1.5.91_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libpam0g_1.7.0-3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libpam-modules-bin_1.7.0-3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libpam-modules_1.7.0-3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libpam-runtime_1.7.0-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libblkid1_2.41-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libsqlite3-0_3.46.1-3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./liblastlog2-2_2.41-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libmount1_2.41-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libsmartcols1_2.41-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libudev1_257.5-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libuuid1_2.41-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./util-linux_2.41-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libdebconfclient0_0.278_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./base-passwd_3.6.7_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./init-system-helpers_1.68_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./libc-bin_2.41-7_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./ncurses-base_6.5%2b20250216-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:15] "GET /./sysvinit-utils_3.14-4_armhf.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.4TnpImDcny 127.0.0.1 - - [21/Jul/2025 16:21:17] code 404, message File not found 127.0.0.1 - - [21/Jul/2025 16:21:17] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:44141 ./ InRelease 127.0.0.1 - - [21/Jul/2025 16:21:17] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:44141 ./ Release 127.0.0.1 - - [21/Jul/2025 16:21:17] code 404, message File not found 127.0.0.1 - - [21/Jul/2025 16:21:17] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:44141 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.4TnpImDcny usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [21/Jul/2025 16:21:23] "GET /./mount_2.41-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:23] "GET /./libseccomp2_2.6.0-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:23] "GET /./libsystemd-shared_257.5-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:23] "GET /./libapparmor1_4.1.0-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:23] "GET /./systemd_257.5-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:23] "GET /./systemd-sysv_257.5-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:23] "GET /./libdbus-1-3_1.16.2-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [21/Jul/2025 16:21:23] "GET /./dbus-bin_1.16.2-2_armhf.deb HTTP/1.1" 200 - 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I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpzb7pfzn9/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.4TnpImDcny Reading package lists... Building dependency tree... Reading state information... libblas-dev is already the newest version (3.12.1-2). libblas-dev set to manually installed. media-types is already the newest version (13.0.0). media-types set to manually installed. libxi6 is already the newest version (2:1.8.2-1). libxi6 set to manually installed. libpixman-1-0 is already the newest version (0.44.0-3). libpixman-1-0 set to manually installed. libkeyutils1 is already the newest version (1.6.3-6). libkeyutils1 set to manually installed. gtk-update-icon-cache is already the newest version (4.18.4+ds-2). gtk-update-icon-cache set to manually installed. texlive-fonts-extra is already the newest version (2024.20250309-2). texlive-fonts-extra set to manually installed. tex-common is already the newest version (6.19). tex-common set to manually installed. libpam-runtime is already the newest version (1.7.0-3). libevent-2.1-7t64 is already the newest version (2.1.12-stable-10+b1). libevent-2.1-7t64 set to manually installed. libbsd0 is already the newest version (0.12.2-2). libbsd0 set to manually installed. gir1.2-freedesktop is already the newest version (1.84.0-1). gir1.2-freedesktop set to manually installed. groff-base is already the newest version (1.23.0-7). groff-base set to manually installed. libcap2 is already the newest version (1:2.75-7). libnghttp3-dev is already the newest version (1.8.0-1). libnghttp3-dev set to manually installed. libxss-dev is already the newest version (1:1.2.3-1+b3). libxss-dev set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. libasound2-data is already the newest version (1.2.14-1). libasound2-data set to manually installed. cpp-arm-linux-gnueabihf is already the newest version (4:14.2.0-1). cpp-arm-linux-gnueabihf set to manually installed. libxau6 is already the newest version (1:1.0.11-1). libxau6 set to manually installed. libwebp-dev is already the newest version (1.5.0-0.1). libwebp-dev set to manually installed. gcc is already the newest version (4:14.2.0-1). gcc set to manually installed. libcairo-script-interpreter2 is already the newest version (1.18.4-1+b1). libcairo-script-interpreter2 set to manually installed. libdeflate0 is already the newest version (1.23-2). libdeflate0 set to manually installed. libdebhelper-perl is already the newest version (13.24.2). libdebhelper-perl set to manually installed. mount is already the newest version (2.41-4). mount set to manually installed. libpng-dev is already the newest version (1.6.47-1.1). libpng-dev set to manually installed. libxml-namespacesupport-perl is already the newest version (1.12-2). libxml-namespacesupport-perl set to manually installed. icu-devtools is already the newest version (76.1-3). icu-devtools set to manually installed. libsepol2 is already the newest version (3.8.1-1). libsepol2 set to manually installed. libcommons-logging-java is already the newest version (1.3.0-1). libcommons-logging-java set to manually installed. libgomp1 is already the newest version (14.2.0-19). libgomp1 set to manually installed. liblapack3 is already the newest version (3.12.1-2). liblapack3 set to manually installed. libunicode-linebreak-perl is already the newest version (0.0.20190101-1+b9). libunicode-linebreak-perl set to manually installed. native-architecture is already the newest version (0.2.6). native-architecture set to manually installed. texinfo is already the newest version (7.1.1-1). texinfo set to manually installed. openjdk-21-jdk is already the newest version (21.0.7+6-1). openjdk-21-jdk set to manually installed. libx11-xcb1 is already the newest version (2:1.8.12-1). libx11-xcb1 set to manually installed. libsqlite3-0 is already the newest version (3.46.1-3). x11-common is already the newest version (1:7.7+24). x11-common set to manually installed. debhelper is already the newest version (13.24.2). debhelper set to manually installed. dh-autoreconf is already the newest version (20). dh-autoreconf set to manually installed. libpangoxft-1.0-0 is already the newest version (1.56.3-1). libpangoxft-1.0-0 set to manually installed. libgnutls28-dev is already the newest version (3.8.9-2). libgnutls28-dev set to manually installed. gcc-14 is already the newest version (14.2.0-19). gcc-14 set to manually installed. libxcb-xfixes0 is already the newest version (1.17.0-2+b1). libxcb-xfixes0 set to manually installed. libxt6t64 is already the newest version (1:1.2.1-1.2+b2). libxt6t64 set to manually installed. systemd-sysv is already the newest version (257.5-2). systemd-sysv set to manually installed. libgcc-14-dev is already the newest version (14.2.0-19). libgcc-14-dev set to manually installed. libuuid1 is already the newest version (2.41-4). libmpfr6 is already the newest version (4.2.2-1). libmpfr6 set to manually installed. librtmp-dev is already the newest version (2.4+20151223.gitfa8646d.1-2+b5). librtmp-dev set to manually installed. gfortran-14-arm-linux-gnueabihf is already the newest version (14.2.0-19). gfortran-14-arm-linux-gnueabihf set to manually installed. libbz2-dev is already the newest version (1.0.8-6). libbz2-dev set to manually installed. libxft-dev is already the newest version (2.3.6-1+b4). libxft-dev set to manually installed. libatspi2.0-0t64 is already the newest version (2.56.2-1). libatspi2.0-0t64 set to manually installed. libice-dev is already the newest version (2:1.1.1-1). libice-dev set to manually installed. libkadm5clnt-mit12 is already the newest version (1.21.3-5). libkadm5clnt-mit12 set to manually installed. mpack is already the newest version (1.6-18+b2). mpack set to manually installed. libaudit1 is already the newest version (1:4.0.2-2+b2). make is already the newest version (4.4.1-2). make set to manually installed. libglib2.0-data is already the newest version (2.84.1-2). libglib2.0-data set to manually installed. default-jdk is already the newest version (2:1.21-76). default-jdk set to manually installed. g++ is already the newest version (4:14.2.0-1). g++ set to manually installed. ucf is already the newest version (3.0051). ucf set to manually installed. libxext-dev is already the newest version (2:1.3.4-1+b3). libxext-dev set to manually installed. fonts-dejavu-mono is already the newest version (2.37-8). fonts-dejavu-mono set to manually installed. libcairo2-dev is already the newest version (1.18.4-1+b1). libcairo2-dev set to manually installed. libtexlua53-5 is already the newest version (2024.20240313.70630+ds-6). libtexlua53-5 set to manually installed. libgbm1 is already the newest version (25.0.4-1). libgbm1 set to manually installed. libxdamage1 is already the newest version (1:1.1.6-1+b2). libxdamage1 set to manually installed. bison is already the newest version (2:3.8.2+dfsg-1+b2). bison set to manually installed. libxcb-render0-dev is already the newest version (1.17.0-2+b1). libxcb-render0-dev set to manually installed. netbase is already the newest version (6.5). netbase set to manually installed. po-debconf is already the newest version (1.0.21+nmu1). po-debconf set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. gcc-arm-linux-gnueabihf is already the newest version (4:14.2.0-1). gcc-arm-linux-gnueabihf set to manually installed. libgfortran5 is already the newest version (14.2.0-19). libgfortran5 set to manually installed. libxtst6 is already the newest version (2:1.2.5-1). libxtst6 set to manually installed. libblkid1 is already the newest version (2.41-4). libgfortran-14-dev is already the newest version (14.2.0-19). libgfortran-14-dev set to manually installed. pkgconf is already the newest version (1.8.1-4). pkgconf set to manually installed. libcurl4-openssl-dev is already the newest version (8.13.0-5). libcurl4-openssl-dev set to manually installed. libssl3t64 is already the newest version (3.5.0-1). libicu-dev is already the newest version (76.1-3). libicu-dev set to manually installed. libkpathsea6 is already the newest version (2024.20240313.70630+ds-6). libkpathsea6 set to manually installed. openjdk-21-jre is already the newest version (21.0.7+6-1). openjdk-21-jre set to manually installed. libpython3.13-stdlib is already the newest version (3.13.3-2). libpython3.13-stdlib set to manually installed. libavahi-client3 is already the newest version (0.8-16). libavahi-client3 set to manually installed. libxml-sax-perl is already the newest version (1.02+dfsg-4). libxml-sax-perl set to manually installed. sensible-utils is already the newest version (0.0.25). sensible-utils set to manually installed. libsynctex2 is already the newest version (2024.20240313.70630+ds-6). libsynctex2 set to manually installed. libjpeg62-turbo-dev is already the newest version (1:2.1.5-3.1). libjpeg62-turbo-dev set to manually installed. libgnutls30t64 is already the newest version (3.8.9-2). libgnutls30t64 set to manually installed. fontconfig is already the newest version (2.15.0-2.3). fontconfig set to manually installed. libcairo2 is already the newest version (1.18.4-1+b1). libcairo2 set to manually installed. libedit2 is already the newest version (3.1-20250104-1). libedit2 set to manually installed. libgraphite2-dev is already the newest version (1.3.14-2+b1). libgraphite2-dev set to manually installed. libnettle8t64 is already the newest version (3.10.1-1). libnettle8t64 set to manually installed. libgdk-pixbuf-2.0-0 is already the newest version (2.42.12+dfsg-2). libgdk-pixbuf-2.0-0 set to manually installed. libicu76 is already the newest version (76.1-3). libicu76 set to manually installed. libkdb5-10t64 is already the newest version (1.21.3-5). libkdb5-10t64 set to manually installed. libfontbox-java is already the newest version (1:1.8.16-5). libfontbox-java set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). readline-common is already the newest version (8.2-6). readline-common set to manually installed. libpangocairo-1.0-0 is already the newest version (1.56.3-1). libpangocairo-1.0-0 set to manually installed. libxxf86vm1 is already the newest version (1:1.1.4-1+b4). libxxf86vm1 set to manually installed. libxcb-shm0-dev is already the newest version (1.17.0-2+b1). libxcb-shm0-dev set to manually installed. libgraphite2-3 is already the newest version (1.3.14-2+b1). libgraphite2-3 set to manually installed. libxfont2 is already the newest version (1:2.0.6-1+b3). libxfont2 set to manually installed. xorg-sgml-doctools is already the newest version (1:1.11-1.1). xorg-sgml-doctools set to manually installed. libmime-charset-perl is already the newest version (1.013.1-2). libmime-charset-perl set to manually installed. base-passwd is already the newest version (3.6.7). python3.13-minimal is already the newest version (3.13.3-2). python3.13-minimal set to manually installed. coreutils is already the newest version (9.7-2). libc-bin is already the newest version (2.41-7). findutils is already the newest version (4.10.0-3). gir1.2-harfbuzz-0.0 is already the newest version (10.2.0-1+b1). gir1.2-harfbuzz-0.0 set to manually installed. libkrb5-3 is already the newest version (1.21.3-5). libkrb5-3 set to manually installed. dash is already the newest version (0.5.12-12). libglib2.0-dev-bin is already the newest version (2.84.1-2). libglib2.0-dev-bin set to manually installed. libxcb1 is already the newest version (1.17.0-2+b1). libxcb1 set to manually installed. libtk8.6 is already the newest version (8.6.16-1). libtk8.6 set to manually installed. libblkid-dev is already the newest version (2.41-4). libblkid-dev set to manually installed. libcap-ng0 is already the newest version (0.8.5-4+b1). libfile-homedir-perl is already the newest version (1.006-2). libfile-homedir-perl set to manually installed. libxss1 is already the newest version (1:1.2.3-1+b3). libxss1 set to manually installed. libcups2t64 is already the newest version (2.4.10-2+b1). libcups2t64 set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.14.1-2). libfile-stripnondeterminism-perl set to manually installed. bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. gfortran is already the newest version (4:14.2.0-1). gfortran set to manually installed. libp11-kit-dev is already the newest version (0.25.5-3). libp11-kit-dev set to manually installed. libglvnd0 is already the newest version (1.7.0-1+b2). libglvnd0 set to manually installed. bsdutils is already the newest version (1:2.41-4). libxcb-render0 is already the newest version (1.17.0-2+b1). libxcb-render0 set to manually installed. xfonts-encodings is already the newest version (1:1.0.4-2.2). xfonts-encodings set to manually installed. libpam-modules is already the newest version (1.7.0-3). perl-base is already the newest version (5.40.1-3). libsensors-config is already the newest version (1:3.6.2-2). libsensors-config set to manually installed. xz-utils is already the newest version (5.8.1-1). xz-utils set to manually installed. libpaper-utils is already the newest version (2.2.5-0.3+b2). libpaper-utils set to manually installed. openssl is already the newest version (3.5.0-1). openssl set to manually installed. python3 is already the newest version (3.13.3-1). python3 set to manually installed. libgtk-3-common is already the newest version (3.24.49-3). libgtk-3-common set to manually installed. m4 is already the newest version (1.4.19-8). m4 set to manually installed. libepoxy0 is already the newest version (1.5.10-2). libepoxy0 set to manually installed. comerr-dev is already the newest version (2.1-1.47.2-1+b1). comerr-dev set to manually installed. libldap-dev is already the newest version (2.6.9+dfsg-2). libldap-dev set to manually installed. libxml2 is already the newest version (2.12.7+dfsg+really2.9.14-0.4). libxml2 set to manually installed. libptexenc1 is already the newest version (2024.20240313.70630+ds-6). libptexenc1 set to manually installed. dconf-service is already the newest version (0.40.0-5). dconf-service set to manually installed. libpixman-1-dev is already the newest version (0.44.0-3). libpixman-1-dev set to manually installed. libpcre2-posix3 is already the newest version (10.45-1). libpcre2-posix3 set to manually installed. libcurl4t64 is already the newest version (8.13.0-5). libcurl4t64 set to manually installed. libpcre2-8-0 is already the newest version (10.45-1). perl is already the newest version (5.40.1-3). perl set to manually installed. libzstd-dev is already the newest version (1.5.7+dfsg-1). libzstd-dev set to manually installed. libpango-1.0-0 is already the newest version (1.56.3-1). libpango-1.0-0 set to manually installed. texlive-binaries is already the newest version (2024.20240313.70630+ds-6). texlive-binaries set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. libjbig-dev is already the newest version (2.1-6.1+b2). libjbig-dev set to manually installed. libtiff-dev is already the newest version (4.7.0-3). libtiff-dev set to manually installed. libnss3 is already the newest version (2:3.110-1). libnss3 set to manually installed. libjs-jquery is already the newest version (3.6.1+dfsg+~3.5.14-1). libjs-jquery set to manually installed. libcommons-parent-java is already the newest version (56-1). libcommons-parent-java set to manually installed. libglx-mesa0 is already the newest version (25.0.4-1). libglx-mesa0 set to manually installed. libpipeline1 is already the newest version (1.5.8-1). libpipeline1 set to manually installed. debianutils is already the newest version (5.22). sysvinit-utils is already the newest version (3.14-4). tcl8.6-dev is already the newest version (8.6.16+dfsg-1). tcl8.6-dev set to manually installed. ca-certificates is already the newest version (20250419). ca-certificates set to manually installed. libfontconfig-dev is already the newest version (2.15.0-2.3). libfontconfig-dev set to manually installed. libxml-sax-base-perl is already the newest version (1.09-3). libxml-sax-base-perl set to manually installed. texlive-latex-base is already the newest version (2024.20250309-1). texlive-latex-base set to manually installed. libharfbuzz0b is already the newest version (10.2.0-1+b1). libharfbuzz0b set to manually installed. g++-arm-linux-gnueabihf is already the newest version (4:14.2.0-1). g++-arm-linux-gnueabihf set to manually installed. libidn2-dev is already the newest version (2.3.8-2). libidn2-dev set to manually installed. libncurses-dev is already the newest version (6.5+20250216-2). libncurses-dev set to manually installed. libmount1 is already the newest version (2.41-4). libstdc++-14-dev is already the newest version (14.2.0-19). libstdc++-14-dev set to manually installed. texlive-extra-utils is already the newest version (2024.20250309-2). texlive-extra-utils set to manually installed. tcl8.6 is already the newest version 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installed. girepository-tools is already the newest version (2.84.1-2). girepository-tools set to manually installed. liblzma-dev is already the newest version (5.8.1-1). liblzma-dev set to manually installed. libk5crypto3 is already the newest version (1.21.3-5). libk5crypto3 set to manually installed. libapache-pom-java is already the newest version (33-2). libapache-pom-java set to manually installed. tzdata is already the newest version (2025b-2). tzdata set to manually installed. libxkbcommon0 is already the newest version (1.7.0-2). libxkbcommon0 set to manually installed. uuid-dev is already the newest version (2.41-4). uuid-dev set to manually installed. libsm-dev is already the newest version (2:1.2.6-1). libsm-dev set to manually installed. libasan8 is already the newest version (14.2.0-19). libasan8 set to manually installed. libxshmfence1 is already the newest version (1.3.3-1). libxshmfence1 set to manually installed. mawk is already the newest version (1.3.4.20250131-1). 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newest version (257.5-2). libsystemd-shared set to manually installed. libllvm19 is already the newest version (1:19.1.7-3). libllvm19 set to manually installed. linux-libc-dev is already the newest version (6.12.25-1). linux-libc-dev set to manually installed. hicolor-icon-theme is already the newest version (0.18-2). hicolor-icon-theme set to manually installed. util-linux is already the newest version (2.41-4). xvfb is already the newest version (2:21.1.16-1). xvfb set to manually installed. tk8.6 is already the newest version (8.6.16-1). tk8.6 set to manually installed. libx11-6 is already the newest version (2:1.8.12-1). libx11-6 set to manually installed. libtirpc-dev is already the newest version (1.3.6+ds-1). libtirpc-dev set to manually installed. libatk-bridge2.0-0t64 is already the newest version (2.56.2-1). libatk-bridge2.0-0t64 set to manually installed. libyaml-tiny-perl is already the newest version (1.76-1). libyaml-tiny-perl set to manually installed. libxmuu1 is already the newest version (2:1.1.3-3+b4). libxmuu1 set to manually installed. gir1.2-glib-2.0 is already the newest version (2.84.1-2). gir1.2-glib-2.0 set to manually installed. dpkg is already the newest version (1.22.18). libavahi-common3 is already the newest version (0.8-16). libavahi-common3 set to manually installed. libexpat1 is already the newest version (2.7.1-1). libexpat1 set to manually installed. libfreetype-dev is already the newest version (2.13.3+dfsg-1). libfreetype-dev set to manually installed. libxcb-randr0 is already the newest version (1.17.0-2+b1). libxcb-randr0 set to manually installed. libmd0 is already the newest version (1.1.0-2+b1). libselinux1 is already the newest version (3.8.1-1). libglib2.0-0t64 is already the newest version (2.84.1-2). libglib2.0-0t64 set to manually installed. libc6 is already the newest version (2.41-7). libgssrpc4t64 is already the newest version (1.21.3-5). libgssrpc4t64 set to manually installed. libz3-4 is already the newest 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libexpat1-dev set to manually installed. libcairo-gobject2 is already the newest version (1.18.4-1+b1). libcairo-gobject2 set to manually installed. texinfo-lib is already the newest version (7.1.1-1+b1). texinfo-lib set to manually installed. cpp-14-arm-linux-gnueabihf is already the newest version (14.2.0-19). cpp-14-arm-linux-gnueabihf set to manually installed. libwebpdecoder3 is already the newest version (1.5.0-0.1). libwebpdecoder3 set to manually installed. xkb-data is already the newest version (2.42-1). xkb-data set to manually installed. libfontenc1 is already the newest version (1:1.1.8-1+b2). libfontenc1 set to manually installed. libubsan1 is already the newest version (14.2.0-19). libubsan1 set to manually installed. libgcc-s1 is already the newest version (14.2.0-19). libtext-charwidth-perl is already the newest version (0.04-11+b4). libtext-charwidth-perl set to manually installed. libudev1 is already the newest version (257.5-2). libxmu6 is already the newest version 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manually installed. libsystemd0 is already the newest version (257.5-2). libxft2 is already the newest version (2.3.6-1+b4). libxft2 set to manually installed. libxcursor1 is already the newest version (1:1.2.3-1). libxcursor1 set to manually installed. libnghttp3-9 is already the newest version (1.8.0-1). libnghttp3-9 set to manually installed. systemd is already the newest version (257.5-2). systemd set to manually installed. xfonts-utils is already the newest version (1:7.7+7). xfonts-utils set to manually installed. pkgconf-bin is already the newest version (1.8.1-4). pkgconf-bin set to manually installed. base-files is already the newest version (13.7). libpam0g is already the newest version (1.7.0-3). libtirpc3t64 is already the newest version (1.3.6+ds-1). libtirpc3t64 set to manually installed. libtasn1-6-dev is already the newest version (4.20.0-2). libtasn1-6-dev set to manually installed. libxcb-present0 is already the newest version (1.17.0-2+b1). libxcb-present0 set to 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libxdmcp-dev is already the newest version (1:1.1.5-1). libxdmcp-dev set to manually installed. libteckit0 is already the newest version (2.5.12+ds1-1+b1). libteckit0 set to manually installed. libwayland-cursor0 is already the newest version (1.23.1-3). libwayland-cursor0 set to manually installed. libaudit-common is already the newest version (1:4.0.2-2). java-common is already the newest version (0.76). java-common set to manually installed. libxext6 is already the newest version (2:1.3.4-1+b3). libxext6 set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-9). libbz2-1.0 is already the newest version (1.0.8-6). texlive-plain-generic is already the newest version (2024.20250309-2). texlive-plain-generic set to manually installed. libsm6 is already the newest version (2:1.2.6-1). libsm6 set to manually installed. libncurses6 is already the newest version (6.5+20250216-2). libncurses6 set to manually installed. libavahi-common-data is already the newest 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libpython3.13-minimal is already the newest version (3.13.3-2). libpython3.13-minimal set to manually installed. libssh2-1-dev is already the newest version (1.11.1-1). libssh2-1-dev set to manually installed. libcloudproviders0 is already the newest version (0.3.6-2). libcloudproviders0 set to manually installed. libtool is already the newest version (2.5.4-4). libtool set to manually installed. libxrender-dev is already the newest version (1:0.9.12-1). libxrender-dev set to manually installed. libxdmcp6 is already the newest version (1:1.1.5-1). libxdmcp6 set to manually installed. libglx0 is already the newest version (1.7.0-1+b2). libglx0 set to manually installed. diffutils is already the newest version (1:3.10-4). libpkgconf3 is already the newest version (1.8.1-4). libpkgconf3 set to manually installed. librtmp1 is already the newest version (2.4+20151223.gitfa8646d.1-2+b5). librtmp1 set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). 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installed. x11proto-dev is already the newest version (2024.1-1). x11proto-dev set to manually installed. libfribidi0 is already the newest version (1.0.16-1). libfribidi0 set to manually installed. libasound2t64 is already the newest version (1.2.14-1). libasound2t64 set to manually installed. dbus-system-bus-common is already the newest version (1.16.2-2). dbus-system-bus-common set to manually installed. libdpkg-perl is already the newest version (1.22.18). libdpkg-perl set to manually installed. libpsl-dev is already the newest version (0.21.2-1.1+b1). libpsl-dev set to manually installed. libharfbuzz-dev is already the newest version (10.2.0-1+b1). libharfbuzz-dev set to manually installed. build-essential is already the newest version (12.12). build-essential set to manually installed. libatk1.0-0t64 is already the newest version (2.56.2-1). libatk1.0-0t64 set to manually installed. nettle-dev is already the newest version (3.10.1-1). nettle-dev set to manually installed. libperl5.40 is already the newest version (5.40.1-3). libperl5.40 set to manually installed. gir1.2-glib-2.0-dev is already the newest version (2.84.1-2). gir1.2-glib-2.0-dev set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). zlib1g-dev set to manually installed. libmount-dev is already the newest version (2.41-4). libmount-dev set to manually installed. xauth is already the newest version (1:1.1.2-1.1). xauth set to manually installed. gfortran-arm-linux-gnueabihf is already the newest version (4:14.2.0-1). gfortran-arm-linux-gnueabihf set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-3). libglib2.0-dev is already the newest version (2.84.1-2). libglib2.0-dev set to manually installed. liblerc-dev is already the newest version (4.0.0+ds-5). liblerc-dev set to manually installed. libffi8 is already the newest version (3.4.8-2). libffi8 set to manually installed. libmpfi0 is already the newest version (1.5.4+ds-4). libmpfi0 set to manually installed. libctf-nobfd0 is already the newest version (2.44-3). libctf-nobfd0 set to manually installed. libx11-data is already the newest version (2:1.8.12-1). libx11-data set to manually installed. libdrm2 is already the newest version (2.4.124-2). libdrm2 set to manually installed. liblzo2-2 is already the newest version (2.10-3+b1). liblzo2-2 set to manually installed. patch is already the newest version (2.8-1). patch set to manually installed. libpotrace0 is already the newest version (1.16-2+b2). libpotrace0 set to manually installed. libdbus-1-3 is already the newest version (1.16.2-2). libdbus-1-3 set to manually installed. libdatrie-dev is already the newest version (0.2.13-3+b1). libdatrie-dev set to manually installed. automake is already the newest version (1:1.17-4). automake set to manually installed. openjdk-21-jdk-headless is already the newest version (21.0.7+6-1). openjdk-21-jdk-headless set to manually installed. openssl-provider-legacy is already the newest version (3.5.0-1). libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. gir1.2-freedesktop-dev is already the newest version (1.84.0-1). gir1.2-freedesktop-dev set to manually installed. libxt-dev is already the newest version (1:1.2.1-1.2+b2). libxt-dev set to manually installed. libgmpxx4ldbl is already the newest version (2:6.3.0+dfsg-3). libgmpxx4ldbl set to manually installed. liblapack-dev is already the newest version (3.12.1-2). liblapack-dev set to manually installed. bsdextrautils is already the newest version (2.41-4). bsdextrautils set to manually installed. libgssapi-krb5-2 is already the newest version (1.21.3-5). libgssapi-krb5-2 set to manually installed. x11-xkb-utils is already the newest version (7.7+9). x11-xkb-utils set to manually installed. xserver-common is already the newest version (2:21.1.16-1). xserver-common set to manually installed. libdeflate-dev is already the newest version (1.23-2). libdeflate-dev set to manually installed. liblzma5 is already the newest version (5.8.1-1). python3-packaging is already the newest version (25.0-1). python3-packaging set to manually installed. libglib2.0-bin is already the newest version (2.84.1-2). libglib2.0-bin set to manually installed. libpam-modules-bin is already the newest version (1.7.0-3). libpango1.0-dev is already the newest version (1.56.3-1). libpango1.0-dev set to manually installed. libfreetype6 is already the newest version (2.13.3+dfsg-1). libfreetype6 set to manually installed. libxcb-sync1 is already the newest version (1.17.0-2+b1). libxcb-sync1 set to manually installed. sed is already the newest version (4.9-2). libgio-2.0-dev-bin is already the newest version (2.84.1-2). libgio-2.0-dev-bin set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. libsframe1 is already the newest version (2.44-3). libsframe1 set to manually installed. libatomic1 is already the newest version (14.2.0-19). libatomic1 set to manually installed. ncurses-base is already the newest version (6.5+20250216-2). libtasn1-6 is already the newest version (4.20.0-2). libtasn1-6 set to manually installed. liblerc4 is already the newest version (4.0.0+ds-5). liblerc4 set to manually installed. libunbound8 is already the newest version (1.22.0-1+b1). libunbound8 set to manually installed. libsasl2-modules-db is already the newest version (2.1.28+dfsg1-9). libsasl2-modules-db set to manually installed. libldap2 is already the newest version (2.6.9+dfsg-2). libldap2 set to manually installed. g++-14 is already the newest version (14.2.0-19). g++-14 set to manually installed. libbrotli-dev is already the newest version (1.1.0-2+b7). libbrotli-dev set to manually installed. libdrm-common is already the newest version (2.4.124-2). libdrm-common set to manually installed. xfonts-base is already the newest version (1:1.0.5+nmu1). xfonts-base set to manually installed. libgdbm6t64 is already the newest version (1.24-2). libgdbm6t64 set to manually installed. libxrandr2 is already the newest version (2:1.5.4-1+b3). libxrandr2 set to manually installed. libncursesw6 is already the newest version (6.5+20250216-2). libncursesw6 set to manually installed. libx11-dev is already the newest version (2:1.8.12-1). libx11-dev set to manually installed. libsmartcols1 is already the newest version (2.41-4). libxau-dev is already the newest version (1:1.0.11-1). libxau-dev set to manually installed. default-jre is already the newest version (2:1.21-76). default-jre set to manually installed. libharfbuzz-gobject0 is already the newest version (10.2.0-1+b1). libharfbuzz-gobject0 set to manually installed. libelf1t64 is already the newest version (0.192-4). libelf1t64 set to manually installed. libice6 is already the newest version (2:1.1.1-1). libice6 set to manually installed. libpcsclite1 is already the newest version (2.3.3-1). libpcsclite1 set to manually installed. libxcomposite1 is already the newest version (1:0.4.6-1). libxcomposite1 set to manually installed. libwayland-client0 is already the newest version (1.23.1-3). libwayland-client0 set to manually installed. dwz is already the newest version (0.15-1+b2). dwz set to manually installed. fonts-dejavu-core is already the newest version (2.37-8). fonts-dejavu-core set to manually installed. libselinux1-dev is already the newest version (3.8.1-1). libselinux1-dev set to manually installed. libtirpc-common is already the newest version (1.3.6+ds-1). libtirpc-common set to manually installed. libxrender1 is already the newest version (1:0.9.12-1). libxrender1 set to manually installed. man-db is already the newest version (2.13.0-1). man-db set to manually installed. libsharpyuv-dev is already the newest version (1.5.0-0.1). libsharpyuv-dev set to manually installed. libctf0 is already the newest version (2.44-3). libctf0 set to manually installed. libcolord2 is already the newest version (1.4.7-3). libcolord2 set to manually installed. libxml-libxml-perl is already the newest version (2.0207+dfsg+really+2.0134-5+b2). libxml-libxml-perl set to manually installed. libnspr4 is already the newest version (2:4.36-1). libnspr4 set to manually installed. libpython3-stdlib is already the newest version (3.13.3-1). libpython3-stdlib set to manually installed. libxkbfile1 is already the newest version (1:1.1.0-1+b4). libxkbfile1 set to manually installed. libpam-systemd is already the newest version (257.5-2). libpam-systemd set to manually installed. pango1.0-tools is already the newest version (1.56.3-1). pango1.0-tools set to manually installed. libsasl2-2 is already the newest version (2.1.28+dfsg1-9). libsasl2-2 set to manually installed. at-spi2-common is already the newest version (2.56.2-1). at-spi2-common set to manually installed. tk8.6-dev is already the newest version (8.6.16-1). tk8.6-dev set to manually installed. grep is already the 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version (10.2.0-1+b1). libharfbuzz-cairo0 set to manually installed. gfortran-14 is already the newest version (14.2.0-19). gfortran-14 set to manually installed. libdatrie1 is already the newest version (0.2.13-3+b1). libdatrie1 set to manually installed. cpp-14 is already the newest version (14.2.0-19). cpp-14 set to manually installed. autopoint is already the newest version (0.23.1-2). autopoint set to manually installed. libcrypt1 is already the newest version (1:4.4.38-1). libffi-dev is already the newest version (3.4.8-2). libffi-dev set to manually installed. binutils is already the newest version (2.44-3). binutils set to manually installed. libdrm-amdgpu1 is already the newest version (2.4.124-2). libdrm-amdgpu1 set to manually installed. python3-minimal is already the newest version (3.13.3-1). python3-minimal set to manually installed. libtcl8.6 is already the newest version (8.6.16+dfsg-1). libtcl8.6 set to manually installed. The following NEW packages will be installed: x11proto-core-dev 127.0.0.1 - - [21/Jul/2025 16:25:50] "GET /./x11proto-core-dev_2024.1-1_all.deb HTTP/1.1" 200 - 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 3312 B of archives. After this operation, 11.3 kB of additional disk space will be used. Get:1 http://localhost:44141 ./ x11proto-core-dev 2024.1-1 [3312 B] Fetched 3312 B in 0s (143 kB/s) Chrooting into /srv/rebuilderd/tmp/mmdebstrap.4TnpImDcny/ Selecting previously unselected package x11proto-core-dev. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 173782 files and directories currently installed.) Preparing to unpack .../x11proto-core-dev_2024.1-1_all.deb ... Unpacking x11proto-core-dev (2024.1-1) ... Chrooting into /srv/rebuilderd/tmp/mmdebstrap.4TnpImDcny/ Setting up x11proto-core-dev (2024.1-1) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.4TnpImDcny (Reading database ... 173785 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.4TnpImDcny I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.4TnpImDcny I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.4TnpImDcny... I: success in 298.1214 seconds Downloading dependency 510 of 515: libcrypt1:armhf=1:4.4.38-1 Downloading dependency 511 of 515: libffi-dev:armhf=3.4.8-2 Downloading dependency 512 of 515: binutils:armhf=2.44-3 Downloading dependency 513 of 515: libdrm-amdgpu1:armhf=2.4.124-2 Downloading dependency 514 of 515: python3-minimal:armhf=3.13.3-1 Downloading dependency 515 of 515: libtcl8.6:armhf=8.6.16+dfsg-1 env --chdir=/srv/rebuilderd/tmp/rebuilderdQws567/out DEB_BUILD_OPTIONS=parallel=4 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1745963799 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildXmufgP/debrebuild.sbuildrc.D22tJefNZ3HI sbuild --build=armhf --host=armhf --no-source --arch-any --no-arch-all --chroot=/srv/rebuilderd/tmp/debrebuildXmufgP/debrebuild.tar.pXnq4pqKXNV1 --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=r-base-4.5.0 /srv/rebuilderd/tmp/rebuilderdQws567/inputs/r-base_4.5.0-3.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild (Debian sbuild) 0.89.3 (07 June 2025) on codethink01-arm64 +==============================================================================+ | r-base 4.5.0-3 (armhf) Mon, 21 Jul 2025 15:26:13 +0000 | +==============================================================================+ Package: r-base Version: 4.5.0-3 Source Version: 4.5.0-3 Distribution: unstable Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildXmufgP/debrebuild.tar.pXnq4pqKXNV1 to /srv/rebuilderd/tmp/tmp.sbuild.PtBPPxuOXp... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Mon, 21 Jul 2025 15:26:36 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdQws567/inputs/r-base_4.5.0-3.dsc exists in /srv/rebuilderd/tmp/rebuilderdQws567/inputs; copying to chroot +------------------------------------------------------------------------------+ | Install package build dependencies Mon, 21 Jul 2025 15:26:38 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: gcc (>= 4:4.9.2-2), g++ (>= 4:4.9.2-2), gfortran (>= 4:4.9.2-2), libblas-dev, liblapack-dev, tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses-dev, libreadline-dev, debhelper-compat (= 13), texinfo, libbz2-dev, liblzma-dev, libpcre2-dev, libcurl4-openssl-dev | libcurl4-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk | openjdk-10-jdk, mpack, bash-completion, libtirpc-dev, build-essential Filtered Build-Depends: gcc (>= 4:4.9.2-2), g++ (>= 4:4.9.2-2), gfortran (>= 4:4.9.2-2), libblas-dev, liblapack-dev, tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses-dev, libreadline-dev, debhelper-compat (= 13), texinfo, libbz2-dev, liblzma-dev, libpcre2-dev, libcurl4-openssl-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk, mpack, bash-completion, libtirpc-dev, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-CxDnVi/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Mon, 21 Jul 2025 15:26:42 +0000 | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any all) +------------------------------------------------------------------------------+ | Build environment Mon, 21 Jul 2025 15:26:43 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.35+deb13-cloud-arm64 #1 SMP Debian 6.12.35-1 (2025-07-03) arm64 (aarch64) Toolchain package versions: binutils_2.44-3 dpkg-dev_1.22.18 g++-14_14.2.0-19 gcc-14_14.2.0-19 libc6-dev_2.41-7 libstdc++-14-dev_14.2.0-19 libstdc++6_14.2.0-19 linux-libc-dev_6.12.25-1 Package versions: adwaita-icon-theme_48.0-1 at-spi2-common_2.56.2-1 autoconf_2.72-3.1 automake_1:1.17-4 autopoint_0.23.1-2 autotools-dev_20240727.1 base-files_13.7 base-passwd_3.6.7 bash_5.2.37-2 bash-completion_1:2.16.0-7 binutils_2.44-3 binutils-arm-linux-gnueabihf_2.44-3 binutils-common_2.44-3 bison_2:3.8.2+dfsg-1+b2 bsdextrautils_2.41-4 bsdutils_1:2.41-4 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20250419 ca-certificates-java_20240118 comerr-dev_2.1-1.47.2-1+b1 coreutils_9.7-2 cpp_4:14.2.0-1 cpp-14_14.2.0-19 cpp-14-arm-linux-gnueabihf_14.2.0-19 cpp-arm-linux-gnueabihf_4:14.2.0-1 dash_0.5.12-12 dbus_1.16.2-2 dbus-bin_1.16.2-2 dbus-daemon_1.16.2-2 dbus-session-bus-common_1.16.2-2 dbus-system-bus-common_1.16.2-2 dbus-user-session_1.16.2-2 dconf-gsettings-backend_0.40.0-5 dconf-service_0.40.0-5 debconf_1.5.91 debhelper_13.24.2 debianutils_5.22 default-jdk_2:1.21-76 default-jdk-headless_2:1.21-76 default-jre_2:1.21-76 default-jre-headless_2:1.21-76 dh-autoreconf_20 dh-strip-nondeterminism_1.14.1-2 diffutils_1:3.10-4 dpkg_1.22.18 dpkg-dev_1.22.18 dwz_0.15-1+b2 file_1:5.46-5 findutils_4.10.0-3 fontconfig_2.15.0-2.3 fontconfig-config_2.15.0-2.3 fonts-dejavu-core_2.37-8 fonts-dejavu-mono_2.37-8 fonts-lmodern_2.005-1 g++_4:14.2.0-1 g++-14_14.2.0-19 g++-14-arm-linux-gnueabihf_14.2.0-19 g++-arm-linux-gnueabihf_4:14.2.0-1 gcc_4:14.2.0-1 gcc-14_14.2.0-19 gcc-14-arm-linux-gnueabihf_14.2.0-19 gcc-14-base_14.2.0-19 gcc-arm-linux-gnueabihf_4:14.2.0-1 gettext_0.23.1-2 gettext-base_0.23.1-2 gfortran_4:14.2.0-1 gfortran-14_14.2.0-19 gfortran-14-arm-linux-gnueabihf_14.2.0-19 gfortran-arm-linux-gnueabihf_4:14.2.0-1 gir1.2-freedesktop_1.84.0-1 gir1.2-freedesktop-dev_1.84.0-1 gir1.2-glib-2.0_2.84.1-2 gir1.2-glib-2.0-dev_2.84.1-2 gir1.2-harfbuzz-0.0_10.2.0-1+b1 gir1.2-pango-1.0_1.56.3-1 girepository-tools_2.84.1-2 grep_3.11-4 groff-base_1.23.0-7 gtk-update-icon-cache_4.18.4+ds-2 gzip_1.13-1 hicolor-icon-theme_0.18-2 hostname_3.25 icu-devtools_76.1-3 init-system-helpers_1.68 intltool-debian_0.35.0+20060710.6 java-common_0.76 krb5-multidev_1.21.3-5 libacl1_2.3.2-2+b1 libapache-pom-java_33-2 libapparmor1_4.1.0-1 libarchive-zip-perl_1.68-1 libasan8_14.2.0-19 libasound2-data_1.2.14-1 libasound2t64_1.2.14-1 libatk-bridge2.0-0t64_2.56.2-1 libatk1.0-0t64_2.56.2-1 libatomic1_14.2.0-19 libatspi2.0-0t64_2.56.2-1 libattr1_1:2.5.2-3 libaudit-common_1:4.0.2-2 libaudit1_1:4.0.2-2+b2 libavahi-client3_0.8-16 libavahi-common-data_0.8-16 libavahi-common3_0.8-16 libbinutils_2.44-3 libblas-dev_3.12.1-2 libblas3_3.12.1-2 libblkid-dev_2.41-4 libblkid1_2.41-4 libbrotli-dev_1.1.0-2+b7 libbrotli1_1.1.0-2+b7 libbsd0_0.12.2-2 libbz2-1.0_1.0.8-6 libbz2-dev_1.0.8-6 libc-bin_2.41-7 libc-dev-bin_2.41-7 libc6_2.41-7 libc6-dev_2.41-7 libcairo-gobject2_1.18.4-1+b1 libcairo-script-interpreter2_1.18.4-1+b1 libcairo2_1.18.4-1+b1 libcairo2-dev_1.18.4-1+b1 libcap-ng0_0.8.5-4+b1 libcap2_1:2.75-7 libcc1-0_14.2.0-19 libcloudproviders0_0.3.6-2 libcolord2_1.4.7-3 libcom-err2_1.47.2-1+b1 libcommons-logging-java_1.3.0-1 libcommons-parent-java_56-1 libcrypt-dev_1:4.4.38-1 libcrypt1_1:4.4.38-1 libctf-nobfd0_2.44-3 libctf0_2.44-3 libcups2t64_2.4.10-2+b1 libcurl4-openssl-dev_8.13.0-5 libcurl4t64_8.13.0-5 libdatrie-dev_0.2.13-3+b1 libdatrie1_0.2.13-3+b1 libdb5.3t64_5.3.28+dfsg2-9 libdbus-1-3_1.16.2-2 libdconf1_0.40.0-5 libdebconfclient0_0.278 libdebhelper-perl_13.24.2 libdeflate-dev_1.23-2 libdeflate0_1.23-2 libdpkg-perl_1.22.18 libdrm-amdgpu1_2.4.124-2 libdrm-common_2.4.124-2 libdrm2_2.4.124-2 libedit2_3.1-20250104-1 libelf1t64_0.192-4 libepoxy0_1.5.10-2 libevent-2.1-7t64_2.1.12-stable-10+b1 libexpat1_2.7.1-1 libexpat1-dev_2.7.1-1 libffi-dev_3.4.8-2 libffi8_3.4.8-2 libfile-homedir-perl_1.006-2 libfile-stripnondeterminism-perl_1.14.1-2 libfile-which-perl_1.27-2 libfontbox-java_1:1.8.16-5 libfontconfig-dev_2.15.0-2.3 libfontconfig1_2.15.0-2.3 libfontconfig1-dev_2.15.0-2.3 libfontenc1_1:1.1.8-1+b2 libfreetype-dev_2.13.3+dfsg-1 libfreetype6_2.13.3+dfsg-1 libfribidi-dev_1.0.16-1 libfribidi0_1.0.16-1 libgbm1_25.0.4-1 libgcc-14-dev_14.2.0-19 libgcc-s1_14.2.0-19 libgdbm-compat4t64_1.24-2 libgdbm6t64_1.24-2 libgdk-pixbuf-2.0-0_2.42.12+dfsg-2 libgdk-pixbuf2.0-common_2.42.12+dfsg-2 libgfortran-14-dev_14.2.0-19 libgfortran5_14.2.0-19 libgif7_5.2.2-1+b1 libgio-2.0-dev_2.84.1-2 libgio-2.0-dev-bin_2.84.1-2 libgirepository-2.0-0_2.84.1-2 libgl1_1.7.0-1+b2 libgl1-mesa-dri_25.0.4-1 libglib2.0-0t64_2.84.1-2 libglib2.0-bin_2.84.1-2 libglib2.0-data_2.84.1-2 libglib2.0-dev_2.84.1-2 libglib2.0-dev-bin_2.84.1-2 libglvnd0_1.7.0-1+b2 libglx-mesa0_25.0.4-1 libglx0_1.7.0-1+b2 libgmp-dev_2:6.3.0+dfsg-3 libgmp10_2:6.3.0+dfsg-3 libgmpxx4ldbl_2:6.3.0+dfsg-3 libgnutls-dane0t64_3.8.9-2 libgnutls-openssl27t64_3.8.9-2 libgnutls28-dev_3.8.9-2 libgnutls30t64_3.8.9-2 libgomp1_14.2.0-19 libgraphite2-3_1.3.14-2+b1 libgraphite2-dev_1.3.14-2+b1 libgssapi-krb5-2_1.21.3-5 libgssrpc4t64_1.21.3-5 libgtk-3-0t64_3.24.49-3 libgtk-3-common_3.24.49-3 libharfbuzz-cairo0_10.2.0-1+b1 libharfbuzz-dev_10.2.0-1+b1 libharfbuzz-gobject0_10.2.0-1+b1 libharfbuzz-icu0_10.2.0-1+b1 libharfbuzz-subset0_10.2.0-1+b1 libharfbuzz0b_10.2.0-1+b1 libhogweed6t64_3.10.1-1 libice-dev_2:1.1.1-1 libice6_2:1.1.1-1 libicu-dev_76.1-3 libicu76_76.1-3 libidn2-0_2.3.8-2 libidn2-dev_2.3.8-2 libisl23_0.27-1 libjansson4_2.14-2+b3 libjbig-dev_2.1-6.1+b2 libjbig0_2.1-6.1+b2 libjpeg-dev_1:2.1.5-3.1 libjpeg62-turbo_1:2.1.5-3.1 libjpeg62-turbo-dev_1:2.1.5-3.1 libjs-jquery_3.6.1+dfsg+~3.5.14-1 libk5crypto3_1.21.3-5 libkadm5clnt-mit12_1.21.3-5 libkadm5srv-mit12_1.21.3-5 libkdb5-10t64_1.21.3-5 libkeyutils1_1.6.3-6 libkpathsea6_2024.20240313.70630+ds-6 libkrb5-3_1.21.3-5 libkrb5-dev_1.21.3-5 libkrb5support0_1.21.3-5 liblapack-dev_3.12.1-2 liblapack3_3.12.1-2 liblastlog2-2_2.41-4 liblcms2-2_2.16-2 libldap-dev_2.6.9+dfsg-2 libldap2_2.6.9+dfsg-2 liblerc-dev_4.0.0+ds-5 liblerc4_4.0.0+ds-5 libllvm19_1:19.1.7-3 liblzma-dev_5.8.1-1 liblzma5_5.8.1-1 liblzo2-2_2.10-3+b1 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmime-charset-perl_1.013.1-2 libmount-dev_2.41-4 libmount1_2.41-4 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xfonts-utils_1:7.7+7 xkb-data_2.42-1 xorg-sgml-doctools_1:1.11-1.1 xserver-common_2:21.1.16-1 xtrans-dev_1.4.0-1 xvfb_2:21.1.16-1 xz-utils_5.8.1-1 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Mon, 21 Jul 2025 15:26:43 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: r-base Binary: r-base, r-base-core, r-base-dev, r-mathlib, r-base-html, r-doc-pdf, r-doc-html, r-doc-info, r-recommended Architecture: any all Version: 4.5.0-3 Maintainer: Dirk Eddelbuettel Homepage: http://www.r-project.org/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/edd/r-base Vcs-Git: https://salsa.debian.org/edd/r-base.git Build-Depends: gcc (>= 4:4.9.2-2), g++ (>= 4:4.9.2-2), gfortran (>= 4:4.9.2-2), libblas-dev, liblapack-dev, tcl8.6-dev, tk8.6-dev, bison, groff-base, libncurses-dev, libreadline-dev, debhelper-compat (= 13), texinfo, libbz2-dev, liblzma-dev, libpcre2-dev, libcurl4-openssl-dev | libcurl4-dev, xdg-utils, zlib1g-dev, libpng-dev, libjpeg-dev, libx11-dev, libxt-dev, x11proto-core-dev, libpango1.0-dev, libcairo2-dev, libtiff-dev, xvfb, xauth, xfonts-base, texlive-base, texlive-latex-base, texlive-plain-generic, texlive-fonts-recommended, texlive-fonts-extra, texlive-extra-utils, texlive-latex-recommended, texlive-latex-extra, default-jdk [!arm !hppa !kfreebsd-any !hurd-any] | openjdk-10-jdk [!arm !hppa !kfreebsd-any !hurd-any], mpack, bash-completion, libtirpc-dev Package-List: r-base deb gnu-r optional arch=all r-base-core deb gnu-r optional arch=any r-base-dev deb gnu-r optional arch=all r-base-html deb doc optional arch=all r-doc-html deb doc optional arch=all r-doc-info deb doc optional arch=all r-doc-pdf deb doc optional arch=all r-mathlib deb gnu-r optional arch=any r-recommended deb gnu-r optional 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DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1745963799 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package r-base dpkg-buildpackage: info: source version 4.5.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Dirk Eddelbuettel dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean *** clean *** dh_testdir dh_testroot rm -f configure-stamp \ build-stamp build-indep-stamp build-arch-stamp \ make-stamp make-arch-stamp make-indep-stamp \ install-indep-stamp install-arch-stamp \ check-stamp [ ! -f Makefile ] || /usr/bin/make distclean rm -f `find . -name "*~"` rm -rf debian/tmp debian/files debian/files* core debian/substvars debian/files rm -f doc/html/function.html doc/html/packages.html rm -f modules/*.so src/unix/Rscript dh_clean debian/rules binary-arch *** configure *** #automake #autoconf dh_testdir R_SHELL=/bin/bash \ mkdir_p="/bin/mkdir -p" \ MKDIR_P="/bin/mkdir -p" \ R_TEXI2DVICMD=emulation \ R_PAPERSIZE=letter \ R_BROWSER=xdg-open \ R_BZIPCMD=/bin/bzip2 \ R_GZIPCMD="/bin/gzip -n" \ PAGER=/usr/bin/pager \ PERL=/usr/bin/perl \ JAVA_HOME=/usr/lib/jvm/default-java \ R_UNZIPCMD=/usr/bin/unzip \ R_ZIPCMD=/usr/bin/zip \ R_PRINTCMD=/usr/bin/lpr \ TAR=/bin/tar \ LIBnn=lib \ AWK=/usr/bin/awk \ DD=/bin/dd \ GREP=/bin/grep \ FGREP="/bin/grep -F" \ EGREP="/bin/grep -E" \ SED=/bin/sed \ GETWD="/bin/pwd" \ CC=gcc \ CXX=g++ \ F77=gfortran \ FC=gfortran \ CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection" \ CPPFLAGS= \ LDFLAGS="-Wl,-z,relro" \ FLIBS= \ rsharedir=/usr/share/R/share \ rincludedir=/usr/share/R/include \ rdocdir=/usr/share/R/doc \ ./configure --prefix=/usr \ --with-cairo \ --with-jpeglib \ --with-readline \ --with-tcltk \ --mandir=/usr/share/man \ --infodir=/usr/share/info \ --datadir=/usr/share/R/share \ --includedir=/usr/share/R/include \ --with-blas \ --with-lapack \ --enable-long-double \ --enable-R-profiling \ --enable-R-shlib \ --enable-memory-profiling \ --without-recommended-packages \ --build arm-linux-gnueabihf checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf loading site script './config.site' loading build-specific script './config.site' checking for pwd... /bin/pwd checking whether builddir is srcdir... yes checking whether ln -s works... yes checking for ar... ar checking for a BSD-compatible install... /usr/bin/install -c checking for sed... /bin/sed checking for which... /usr/bin/which checking for /usr/bin/pager... /usr/bin/pager checking for /bin/tar... /bin/tar checking for tex... /usr/bin/tex checking for pdftex... /usr/bin/pdftex checking for pdflatex... /usr/bin/pdflatex checking for makeindex... /usr/bin/makeindex checking for texi2any... /usr/bin/texi2any checking whether texi2any version is at least 6.1... yes checking for ginstall-info... no checking for install-info... no checking for texi2dvi... /usr/bin/texi2dvi checking for kpsewhich... /usr/bin/kpsewhich checking for latex inconsolata package... found zi4.sty checking for unzip... /usr/bin/unzip checking for zip... /usr/bin/zip checking for 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compile C++ code... yes checking how to run the C++ preprocessor... g++ -E checking whether __attribute__((visibility())) is supported... yes checking whether gcc -std=gnu23 accepts -fvisibility... yes checking whether g++ accepts -fvisibility... yes checking whether gfortran accepts -fvisibility... yes checking for gcc... gcc checking whether the compiler supports GNU Objective C... no checking whether gcc accepts -g... no checking whether gcc -std=gnu17 is a C17 compiler... yes checking whether gcc -std=gnu90 is a C90 compiler... yes checking whether gcc -std=gnu99 is a C99 compiler... yes checking how to print strings... printf checking for a sed that does not truncate output... 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BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking for gawk... /usr/bin/awk checking command to parse /usr/bin/nm -B output from gcc -std=gnu23 object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc -std=gnu23 supports -fno-rtti -fno-exceptions... no checking for gcc -std=gnu23 option to produce PIC... -fPIC -DPIC checking if gcc -std=gnu23 PIC flag -fPIC -DPIC works... yes checking if gcc -std=gnu23 static flag -static works... yes checking if gcc -std=gnu23 supports -c -o file.o... yes checking if gcc -std=gnu23 supports -c -o file.o... 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verbose linking output from gfortran... -v checking for Fortran libraries of gfortran... -L/usr/lib/gcc/arm-linux-gnueabihf/14 -L/usr/lib/gcc/arm-linux-gnueabihf/14/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/14/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgfortran -lm checking how to get verbose linking output from gcc -std=gnu23... -v checking for C libraries of gcc -std=gnu23... -L/usr/lib/gcc/arm-linux-gnueabihf/14 -L/usr/lib/gcc/arm-linux-gnueabihf/14/../../../arm-linux-gnueabihf -L/usr/lib/gcc/arm-linux-gnueabihf/14/../../.. -L/lib/arm-linux-gnueabihf -L/usr/lib/arm-linux-gnueabihf -lgcc_s checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking whether gfortran appends underscores to external names... yes checking whether gfortran appends extra underscores to external names... no checking whether mixed C/Fortran code can be run... 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declared... yes checking whether execv exists and is declared... yes checking whether ftruncate exists and is declared... yes checking whether getcwd exists and is declared... yes checking whether geteuid exists and is declared... yes checking whether getuid exists and is declared... yes checking whether link exists and is declared... yes checking whether readlink exists and is declared... yes checking whether symlink exists and is declared... yes checking whether sysconf exists and is declared... yes checking whether sched_setaffinity exists and is declared... yes checking whether sched_getaffinity exists and is declared... yes checking whether utime exists and is declared... yes checking whether utimensat exists and is declared... yes checking for clock_gettime in -lrt... yes checking whether clock_gettime exists and is declared... yes checking whether timespec_get exists and is declared... yes checking for putenv... yes checking whether putenv is declared... yes checking for 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and is declared... yes checking whether carg exists and is declared... yes checking whether cexp exists and is declared... yes checking whether clog exists and is declared... yes checking whether csqrt exists and is declared... yes checking whether cpow exists and is declared... yes checking whether ccos exists and is declared... yes checking whether csin exists and is declared... yes checking whether ctan exists and is declared... yes checking whether cacos exists and is declared... yes checking whether casin exists and is declared... yes checking whether catan exists and is declared... yes checking whether ccosh exists and is declared... yes checking whether csinh exists and is declared... yes checking whether ctanh exists and is declared... yes checking for working ctanh... yes checking whether 'struct tm' includes tm_zone... yes checking whether 'struct tm' includes tm_gmtoff... yes configure: searching for an external BLAS configure: searching for BLAS in default libraries checking for dgemm_... no configure: searching for OpenBLAS checking for sgemm_ in -lopenblas... no configure: searching for BLIS checking for sgemm_ in -lblis... no configure: searching for ATLAS checking for ATL_xerbla in -latlas... no configure: searching for PhiPACK checking for dgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no configure: searching for IBM ESSL checking for dgemm_ in -lblas... (cached) yes checking for dgemm_ in -lessl... no configure: searching for generic BLAS library checking for dgemm_ in -lblas... (cached) yes checking whether double complex BLAS can be used... yes checking whether the BLAS is complete... yes checking for dpstrf_... no checking for dpstrf_ in -llapack... yes checking for iconv.h... yes checking for iconv... yes checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes checking whether iconv accepts "CP1252"... yes checking for iconvlist... no checking for iconv... yes checking for iconv declaration... extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for wchar.h... (cached) yes checking for wctype.h... yes checking whether mbrtowc exists and is declared... yes checking whether wcrtomb exists and is declared... yes checking whether wcscoll exists and is declared... yes checking whether wcsftime exists and is declared... yes checking whether wcstod exists and is declared... yes checking whether mbstowcs exists and is declared... yes checking whether wcstombs exists and is declared... yes checking whether wctrans exists and is declared... yes checking whether wctype exists and is declared... yes checking whether iswctype exists and is declared... yes checking whether wcwidth exists and is declared... yes checking whether wcswidth exists and is declared... yes checking for wctrans_t... yes checking for mbstate_t... yes checking for ICU... yes checking for X... libraries , headers checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking for X11/Intrinsic.h... yes checking for XtToolkitInitialize in -lXt... yes using X11 ... yes checking for KeySym... yes checking for X11/Xmu/Atoms.h... no checking whether pkg-config knows about cairo and pango... yes checking whether cairo including pango is >= 1.2 and works... yes checking for tclConfig.sh... no checking for tclConfig.sh in library (sub)directories... /usr/lib/tcl8.6/tclConfig.sh checking for tkConfig.sh... no checking for tkConfig.sh in library (sub)directories... /usr/lib/tk8.6/tkConfig.sh checking for tcl.h... yes checking for tk.h... yes checking whether compiling/linking Tcl/Tk code works... yes checking for BSD networking... yes checking for rpc/types.h... no checking for tirpc/rpc/types.h... yes checking for tirpc/rpc/xdr.h... yes checking for XDR library... -ltirpc checking for XDR support... yes checking for inflateInit2_ in -lz... yes checking for zlib.h... yes checking if zlib version >= 1.2.5... yes checking whether zlib support suffices... yes checking for BZ2_bzlibVersion in -lbz2... yes checking for bzlib.h... yes checking if bzip2 version >= 1.0.6... yes checking whether bzip2 support suffices... yes checking for lzma_version_number in -llzma... yes checking for lzma.h... yes checking if lzma version >= 5.0.3... yes checking for ZSTD_versionNumber in -lzstd... yes checking for zstd.h... yes checking if zstd version >= 1.3.3... yes checking for ZSTD_decompressBound... yes checking for libdeflate.h... yes checking for libdeflate_alloc_compressor in -ldeflate... yes yes checking for pcre2.h... yes checking for pcre2_compile_8 in -lpcre2-8... yes checking if PCRE2 has Unicode support... yes checking whether PCRE support suffices... yes checking for curl-config... /usr/bin/curl-config checking libcurl version ... 8.13.0 checking for curl/curl.h... yes checking if libcurl is >= 7.28.0... yes checking if libcurl supports https... yes checking if pkg-config knows about libjpeg... yes checking if jpeglib version >= 6b... yes checking for jpeg_destroy_compress in -ljpeg... yes checking if pkg-config knows about libpng... yes checking if libpng version >= 1.2.7... yes checking for png_create_write_struct in -lpng... yes checking if pkg-config knows about libtiff... yes checking for tiffio.h... yes checking for TIFFOpen in -ltiff... yes checking whether leap seconds are treated according to POSIX... yes checking for inline... inline checking for struct stat.st_atim.tv_nsec... yes checking whether struct stat.st_atim is of type struct timespec... yes checking for setitimer... yes checking for gcc -std=gnu23 option to enable large file support... none needed checking for declarations of fseeko and ftello... yes checking whether KERN_USRSTACK sysctl is supported... no checking for visible __lib_stack_end... yes checking for paperconf... /usr/bin/paperconf checking for Fortran flag to compile .f90 files... none checking for Fortran flag to compile .f95 files... none checking for gfortran option to support OpenMP... (cached) -fopenmp checking whether NLS is requested... yes Configuring src/extra/intl directory checking for a race-free mkdir -p... /bin/mkdir -p checking whether we are using the GNU C Library 2 or newer... yes checking for ranlib... (cached) ranlib checking for simple visibility declarations... yes checking for stdint.h... yes checking for getpagesize... yes checking for working mmap... yes checking whether integer division by zero raises SIGFPE... no checking for inttypes.h... yes checking for unsigned long long int... yes checking for inttypes.h... (cached) yes checking whether the inttypes.h PRIxNN macros are broken... no checking for ld used by gcc -std=gnu23... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for shared library run path origin... done checking whether imported symbols can be declared weak... yes checking for multithread API to use... none checking for argz.h... yes checking for inttypes.h... (cached) yes checking for limits.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... (cached) yes checking for getcwd... yes checking for getegid... yes checking for geteuid... yes checking for getgid... yes checking for getuid... yes checking for mempcpy... (cached) yes checking for munmap... yes checking for stpcpy... (cached) yes checking for strcasecmp... yes checking for strdup... (cached) yes checking for strtoul... yes checking for tsearch... yes checking for argz_count... yes checking for argz_stringify... yes checking for argz_next... yes checking for __fsetlocking... yes checking whether feof_unlocked is declared... yes checking whether fgets_unlocked is declared... yes checking for iconv... (cached) yes checking for iconv declaration... (cached) extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for NL_LOCALE_NAME macro... yes checking for bison... bison checking version of bison... 3.8.2, ok checking for long long int... yes checking for long double... yes checking for wchar_t... yes checking for wint_t... yes checking for intmax_t... yes checking whether printf() supports POSIX/XSI format strings... yes checking whether we are using the GNU C Library 2.1 or newer... yes checking for stdint.h... (cached) yes checking for SIZE_MAX... yes checking for stdint.h... (cached) yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for ptrdiff_t... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for asprintf... yes checking for fwprintf... yes checking for putenv... (cached) yes checking for setenv... yes checking for setlocale... yes checking for snprintf... yes checking for wcslen... yes checking whether _snprintf is declared... no checking whether _snwprintf is declared... no checking whether getc_unlocked is declared... yes checking for nl_langinfo and CODESET... (cached) yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... (cached) no checking for CFLocaleCopyCurrent... (cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/bash configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands R is now configured for arm-unknown-linux-gnueabihf Source directory: . Installation directory: /usr C compiler: gcc -std=gnu23 -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 Fortran fixed-form compiler: gfortran -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection Default C++ compiler: g++ -std=gnu++17 -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 Fortran free-form compiler: gfortran -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection Obj-C compiler: Interfaces supported: X11, tcltk External libraries: pcre2, readline, BLAS(generic), LAPACK(generic), curl, libdeflate Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, R profiling, memory profiling, libdeflate for lazyload Capabilities skipped: Options not enabled: shared BLAS Recommended packages: no configure: WARNING: 32-bit build -- this is little tested touch configure-stamp *** make-arch *** /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection" \ CC=gcc \ CXX=g++ \ F77=gfortran \ LDFLAGS="-Wl,-z,relro" \ PKG_BUILT_STAMP="""" \ R_GZIPCMD="/bin/gzip -n" \ R make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' creating src/scripts/R.fe make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' mkdir -p -- ../../bin make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' mkdir -p -- ../../include make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' making regcomp.d from regcomp.c making regerror.d from regerror.c making regexec.d from regexec.c making tre-ast.d from tre-ast.c making tre-compile.d from tre-compile.c making tre-match-approx.d from tre-match-approx.c making tre-match-backtrack.d from tre-match-backtrack.c making tre-match-parallel.d from tre-match-parallel.c making tre-mem.d from tre-mem.c making tre-parse.d from tre-parse.c making tre-stack.d from tre-stack.c make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regcomp.c -o regcomp.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regerror.c -o regerror.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c regexec.c -o regexec.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-ast.c -o tre-ast.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-compile.c -o tre-compile.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-approx.c -o tre-match-approx.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-backtrack.c -o tre-match-backtrack.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-match-parallel.c -o tre-match-parallel.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-mem.c -o tre-mem.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-parse.c -o tre-parse.o gcc -I. -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c tre-stack.c -o tre-stack.o ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o ranlib libtre.a make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' making integrate.d from integrate.c making interv.d from interv.c making maxcol.d from maxcol.c making optim.d from optim.c making pretty.d from pretty.c making uncmin.d from uncmin.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c integrate.c -o integrate.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c interv.c -o interv.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c maxcol.c -o maxcol.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c optim.c -o optim.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pretty.c -o pretty.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c uncmin.c -o uncmin.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dchdc.f -o dchdc.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dpbfa.f -o dpbfa.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dpbsl.f -o dpbsl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dpoco.f -o dpoco.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dpodi.f -o dpodi.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dpofa.f -o dpofa.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dposl.f -o dposl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dqrdc.f -o dqrdc.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dqrdc2.f -o dqrdc2.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dqrls.f -o dqrls.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dqrsl.f -o dqrsl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dqrutl.f -o dqrutl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dsvdc.f -o dsvdc.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dtrco.f -o dtrco.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c dtrsl.f -o dtrsl.o ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c mlutils.c -o mlutils.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c d1mach.c -o d1mach.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c i1mach.c -o i1mach.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c fmax2.c -o fmax2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c fmin2.c -o fmin2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c fprec.c -o fprec.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c fround.c -o fround.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c ftrunc.c -o ftrunc.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c sign.c -o sign.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c fsign.c -o fsign.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c imax2.c -o imax2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c imin2.c -o imin2.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c chebyshev.c -o chebyshev.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c log1p.c -o log1p.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c lgammacor.c -o lgammacor.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c gammalims.c -o gammalims.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c stirlerr.c -o stirlerr.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c bd0.c -o bd0.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c gamma.c -o gamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c lgamma.c -o lgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c beta.c -o beta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c lbeta.c -o lbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c polygamma.c -o polygamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c cospi.c -o cospi.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_i.c -o bessel_i.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_j.c -o bessel_j.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_k.c -o bessel_k.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c bessel_y.c -o bessel_y.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c choose.c -o choose.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c snorm.c -o snorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c sexp.c -o sexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dgamma.c -o dgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pgamma.c -o pgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qgamma.c -o qgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rgamma.c -o rgamma.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dbeta.c -o dbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pbeta.c -o pbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qbeta.c -o qbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rbeta.c -o rbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dunif.c -o dunif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c punif.c -o punif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qunif.c -o qunif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c runif.c -o runif.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dnorm.c -o dnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pnorm.c -o pnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qnorm.c -o qnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rnorm.c -o rnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dlnorm.c -o dlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c plnorm.c -o plnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qlnorm.c -o qlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rlnorm.c -o rlnorm.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c df.c -o df.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pf.c -o pf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qf.c -o qf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rf.c -o rf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dnf.c -o dnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dt.c -o dt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pt.c -o pt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qt.c -o qt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rt.c -o rt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dnt.c -o dnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dchisq.c -o dchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pchisq.c -o pchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qchisq.c -o qchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rchisq.c -o rchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rnchisq.c -o rnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dbinom.c -o dbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pbinom.c -o pbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qbinom.c -o qbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rbinom.c -o rbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rmultinom.c -o rmultinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dcauchy.c -o dcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pcauchy.c -o pcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qcauchy.c -o qcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rcauchy.c -o rcauchy.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dexp.c -o dexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pexp.c -o pexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qexp.c -o qexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rexp.c -o rexp.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dgeom.c -o dgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pgeom.c -o pgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qgeom.c -o qgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rgeom.c -o rgeom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dhyper.c -o dhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c phyper.c -o phyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qhyper.c -o qhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rhyper.c -o rhyper.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dnbinom.c -o dnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pnbinom.c -o pnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbinom.c -o qnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rnbinom.c -o rnbinom.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dpois.c -o dpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c ppois.c -o ppois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qpois.c -o qpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rpois.c -o rpois.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dweibull.c -o dweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pweibull.c -o pweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qweibull.c -o qweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rweibull.c -o rweibull.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dlogis.c -o dlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c plogis.c -o plogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qlogis.c -o qlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rlogis.c -o rlogis.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dnchisq.c -o dnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pnchisq.c -o pnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qnchisq.c -o qnchisq.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dnbeta.c -o dnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pnbeta.c -o pnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qnbeta.c -o qnbeta.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pnf.c -o pnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pnt.c -o pnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qnf.c -o qnf.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qnt.c -o qnt.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c ptukey.c -o ptukey.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qtukey.c -o qtukey.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c toms708.c -o toms708.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c wilcox.c -o wilcox.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o ranlib libnmath.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' config.status: creating src/unix/Makefile making Rembedded.d from Rembedded.c making dynload.d from dynload.c making system.d from system.c making sys-unix.d from sys-unix.c making sys-std.d from sys-std.c making X11.d from X11.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c Rembedded.c -o Rembedded.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dynload.c -o dynload.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c system.c -o system.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c sys-unix.c -o sys-unix.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c sys-std.c -o sys-std.o gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.0"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' config.status: creating src/main/Makefile making CommandLineArgs.d from CommandLineArgs.c making Rdynload.d from Rdynload.c making Renviron.d from Renviron.c making RNG.d from RNG.c making agrep.d from agrep.c making altclasses.d from altclasses.c making altrep.d from altrep.c making apply.d from apply.c making arithmetic.d from arithmetic.c making array.d from array.c making attrib.d from attrib.c making bind.d from bind.c making builtin.d from builtin.c making character.d from character.c making clippath.d from clippath.c making coerce.d from coerce.c making colors.d from colors.c making complex.d from complex.c making connections.d from connections.c making context.d from context.c making cum.d from cum.c making dcf.d from dcf.c making datetime.d from datetime.c making debug.d from debug.c making deparse.d from deparse.c making devices.d from devices.c making dotcode.d from dotcode.c making dounzip.d from dounzip.c making dstruct.d from dstruct.c making duplicate.d from duplicate.c making edit.d from edit.c making engine.d from engine.c making envir.d from envir.c making errors.d from errors.c making eval.d from eval.c making flexiblas.d from flexiblas.c making format.d from format.c making gevents.d from gevents.c making gram.d from gram.c making gram-ex.d from gram-ex.c making graphics.d from graphics.c making grep.d from grep.c making identical.d from identical.c making inlined.d from inlined.c making inspect.d from inspect.c making internet.d from internet.c making iosupport.d from iosupport.c making lapack.d from lapack.c making list.d from list.c making localecharset.d from localecharset.c making logic.d from logic.c making machine.d from machine.c making main.d from main.c making mapply.d from mapply.c making mask.d from mask.c making match.d from match.c making memory.d from memory.c making names.d from names.c making objects.d from objects.c making options.d from options.c making paste.d from paste.c making patterns.d from patterns.c making platform.d from platform.c making plot.d from plot.c making plot3d.d from plot3d.c making plotmath.d from plotmath.c making print.d from print.c making printarray.d from printarray.c making printvector.d from printvector.c making printutils.d from printutils.c making qsort.d from qsort.c making radixsort.d from radixsort.c making random.d from random.c making raw.d from raw.c making registration.d from registration.c making relop.d from relop.c making rlocale.d from rlocale.c making saveload.d from saveload.c making scan.d from scan.c making seq.d from seq.c making serialize.d from serialize.c making sort.d from sort.c making source.d from source.c making split.d from split.c making sprintf.d from sprintf.c making startup.d from startup.c making subassign.d from subassign.c making subscript.d from subscript.c making subset.d from subset.c making summary.d from summary.c making sysutils.d from sysutils.c making times.d from times.c making unique.d from unique.c making util.d from util.c making version.d from version.c making g_alab_her.d from g_alab_her.c making g_cntrlify.d from g_cntrlify.c making g_fontdb.d from g_fontdb.c making g_her_glyph.d from g_her_glyph.c making Rmain.d from Rmain.c making alloca.d from alloca.c making mkdtemp.d from mkdtemp.c making strdup.d from strdup.c making strncasecmp.d from strncasecmp.c make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c CommandLineArgs.c -o CommandLineArgs.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c Rdynload.c -o Rdynload.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c Renviron.c -o Renviron.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c RNG.c -o RNG.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c agrep.c -o agrep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c altclasses.c -o altclasses.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c altrep.c -o altrep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c apply.c -o apply.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c arithmetic.c -o arithmetic.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c array.c -o array.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c attrib.c -o attrib.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c bind.c -o bind.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c builtin.c -o builtin.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c character.c -o character.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c coerce.c -o coerce.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c colors.c -o colors.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c complex.c -o complex.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c connections.c -o connections.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c context.c -o context.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c cum.c -o cum.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dcf.c -o dcf.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c datetime.c -o datetime.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c debug.c -o debug.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c deparse.c -o deparse.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c devices.c -o devices.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dotcode.c -o dotcode.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dounzip.c -o dounzip.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dstruct.c -o dstruct.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c duplicate.c -o duplicate.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c edit.c -o edit.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c engine.c -o engine.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c envir.c -o envir.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c errors.c -o errors.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c eval.c -o eval.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c flexiblas.c -o flexiblas.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c format.c -o format.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c gevents.c -o gevents.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c gram.c -o gram.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c gram-ex.c -o gram-ex.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c graphics.c -o graphics.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c grep.c -o grep.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c identical.c -o identical.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c inlined.c -o inlined.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c inspect.c -o inspect.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c internet.c -o internet.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c iosupport.c -o iosupport.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c lapack.c -o lapack.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c list.c -o list.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c localecharset.c -o localecharset.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c logic.c -o logic.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c machine.c -o machine.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c main.c -o main.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c mapply.c -o mapply.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c match.c -o match.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c memory.c -o memory.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c names.c -o names.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c objects.c -o objects.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c options.c -o options.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c paste.c -o paste.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c patterns.c -o patterns.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c platform.c -o platform.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c plot.c -o plot.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c plot3d.c -o plot3d.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c plotmath.c -o plotmath.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c print.c -o print.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c printarray.c -o printarray.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c printvector.c -o printvector.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c printutils.c -o printutils.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c qsort.c -o qsort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c radixsort.c -o radixsort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c random.c -o random.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c raw.c -o raw.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c registration.c -o registration.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c relop.c -o relop.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rlocale.c -o rlocale.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c saveload.c -o saveload.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c scan.c -o scan.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c seq.c -o seq.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c serialize.c -o serialize.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c sort.c -o sort.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c source.c -o source.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c split.c -o split.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c sprintf.c -o sprintf.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c startup.c -o startup.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c subassign.c -o subassign.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c subscript.c -o subscript.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c subset.c -o subset.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c summary.c -o summary.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c sysutils.c -o sysutils.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c times.c -o times.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c unique.c -o unique.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c util.c -o util.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c version.c -o version.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c g_alab_her.c -o g_alab_her.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c g_cntrlify.c -o g_cntrlify.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c g_fontdb.c -o g_fontdb.o gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c g_her_glyph.c -o g_her_glyph.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c xxxpr.f -o xxxpr.o gcc -shared -fopenmp -Wl,-z,relro -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o altclasses.o altrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o clippath.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o flexiblas.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o machine.o main.o mapply.o mask.o match.o memory.o names.o objects.o options.o paste.o patterns.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a -lblas -lgfortran -lm -lreadline -lpcre2-8 -ldeflate -lzstd -llzma -lbz2 -lz -ltirpc -lrt -ldl -lm -licuuc -licui18n make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.0/bin/exec mkdir -p -- /build/reproducible-path/r-base-4.5.0/lib make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' gcc -I../../src/extra -I/usr/include/tirpc -I. -I../../src/include -I../../src/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c Rmain.c -o Rmain.o gcc -Wl,--export-dynamic -fopenmp -L"../../lib" -Wl,-z,relro -o R.bin Rmain.o -lR make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' making Rhttpd.d from Rhttpd.c making Rsock.d from Rsock.c making internet.d from internet.c making libcurl.d from libcurl.c making sock.d from sock.c making sockconn.d from sockconn.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c Rsock.c -o Rsock.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c internet.c -o internet.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c libcurl.c -o libcurl.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c sock.c -o sock.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -c sockconn.c -o sockconn.o gcc -shared -L"../../../lib" -Wl,-z,relro -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o sock.o sockconn.o -lcurl -lR make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' mkdir -p -- /build/reproducible-path/r-base-4.5.0/modules make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' making Lapack.d from Lapack.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c Lapack.c -o Lapack.o gcc -I. -I../../../src/include -I../../../src/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c ../../main/flexiblas.c -o flexiblas.o gcc -shared -L"../../../lib" -Wl,-z,relro -o lapack.so Lapack.o flexiblas.o -lR -llapack -lblas -lgfortran -lm make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' making devX11.d from devX11.c making rotated.d from rotated.c making rbitmap.d from rbitmap.c make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' gcc -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c devX11.c -o devX11.o gcc -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rotated.c -o rotated.o gcc -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rbitmap.c -o rbitmap.o gcc -shared -L"../../../lib" -Wl,-z,relro -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lpng16 -lcairo -lX11 -lXext -lX11 -lXt -lR -lm gcc -I/usr/include/libpng16 -I/usr/include/arm-linux-gnueabihf -I/usr/include/webp -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dataentry.c -o dataentry.o gcc -shared -L"../../../lib" -Wl,-z,relro -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lpng16 -lcairo -lX11 -lXext -lX11 -lXt -lR -lm make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' mkdir -p -- ../../library make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' building system startup profile mkdir -p -- ../../../library/base/R make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' building package 'translations' mkdir -p -- ../../../library/translations make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' mkdir -p -- ../../../library/base/demo make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' building package 'tools' mkdir -p -- ../../../library/tools make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' mkdir -p -- ../../../library/tools/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' making text.d from text.c making init.d from init.c making Rmd5.d from Rmd5.c making md5.d from md5.c making signals.d from signals.c making install.d from install.c making getfmts.d from getfmts.c making http.d from http.c making gramLatex.d from gramLatex.c making gramRd.d from gramRd.c making pdscan.d from pdscan.c making Rsha256.d from Rsha256.c making sha256.d from sha256.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c text.c -o text.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c Rmd5.c -o Rmd5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c md5.c -o md5.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c signals.c -o signals.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c install.c -o install.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c getfmts.c -o getfmts.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c http.c -o http.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c gramLatex.c -o gramLatex.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c gramRd.c -o gramRd.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pdscan.c -o pdscan.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c Rsha256.c -o Rsha256.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c sha256.c -o sha256.o gcc -shared -L../../../../lib -Wl,-z,relro -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o pdscan.o Rsha256.o sha256.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' building package 'compiler' mkdir -p -- ../../../library/compiler make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' mkdir -p -- ../../../library/compiler/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' byte-compiling package 'compiler' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' byte-compiling package 'base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' byte-compiling package 'tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' building package 'utils' mkdir -p -- ../../../library/utils mkdir -p -- ../../../library/utils/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' mkdir -p -- ../../../library/utils/R mkdir -p -- ../../../library/utils/Sweave mkdir -p -- ../../../library/utils/misc make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' making init.d from init.c making io.d from io.c making size.d from size.c making sock.d from sock.c making stubs.d from stubs.c making utils.d from utils.c making hashtab.d from hashtab.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c io.c -o io.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c size.c -o size.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c sock.c -o sock.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c utils.c -o utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c hashtab.c -o hashtab.o gcc -shared -L../../../../lib -Wl,-z,relro -o utils.so init.o io.o size.o sock.o stubs.o utils.o hashtab.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' mkdir -p -- ../../../../library/utils/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' byte-compiling package 'utils' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' building package 'grDevices' mkdir -p -- ../../../library/grDevices make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' mkdir -p -- ../../../library/grDevices/R mkdir -p -- ../../../library/grDevices/afm mkdir -p -- ../../../library/grDevices/enc mkdir -p -- ../../../library/grDevices/fonts/Roboto mkdir -p -- ../../../library/grDevices/fonts/Montserrat/static mkdir -p -- ../../../library/grDevices/icc make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' making axis_scales.d from axis_scales.c making chull.d from chull.c making devices.d from devices.c making init.d from init.c making stubs.d from stubs.c making colors.d from colors.c making clippath.d from clippath.c making patterns.d from patterns.c making mask.d from mask.c making group.d from group.c making devCairo.d from devCairo.c making devPicTeX.d from devPicTeX.c making devPS.d from devPS.c making devQuartz.d from devQuartz.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c axis_scales.c -o axis_scales.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c chull.c -o chull.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c devices.c -o devices.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c stubs.c -o stubs.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c colors.c -o colors.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c patterns.c -o patterns.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c group.c -o group.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c devCairo.c -o devCairo.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c devPicTeX.c -o devPicTeX.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c devPS.c -o devPS.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c devQuartz.c -o devQuartz.o gcc -shared -L../../../../lib -Wl,-z,relro -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o clippath.o patterns.o mask.o group.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' mkdir -p -- ../../../../library/grDevices/libs make[8]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' making cairoBM.d from cairoBM.c make[9]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' gcc -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -I/usr/include/sysprof-6 -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/libmount -I/usr/include/blkid -I/usr/include/fribidi -I/usr/include/cairo -I/usr/include/pixman-1 -pthread -I../../../../../src/modules/X11 -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c cairoBM.c -o cairoBM.o gcc -shared -L"../../../../../lib" -Wl,-z,relro -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lharfbuzz -lz -lcairo -lpng16 -L"../../../../../lib" -lR -lm make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' byte-compiling package 'grDevices' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' building package 'graphics' mkdir -p -- ../../../library/graphics make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' mkdir -p -- ../../../library/graphics/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' making init.d from init.c making base.d from base.c making graphics.d from graphics.c making par.d from par.c making plot.d from plot.c making plot3d.d from plot3d.c making stem.d from stem.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c base.c -o base.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c graphics.c -o graphics.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c par.c -o par.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c plot.c -o plot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c plot3d.c -o plot3d.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c stem.c -o stem.o gcc -shared -L../../../../lib -Wl,-z,relro -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' mkdir -p -- ../../../../library/graphics/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' byte-compiling package 'graphics' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' building package 'stats' mkdir -p -- ../../../library/stats mkdir -p -- ../../../library/stats/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' mkdir -p -- ../../../library/stats/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' making init.d from init.c making kmeans.d from kmeans.c making ansari.d from ansari.c making bandwidths.d from bandwidths.c making chisqsim.d from chisqsim.c making d2x2xk.d from d2x2xk.c making fexact.d from fexact.c making kendall.d from kendall.c making ks.d from ks.c making line.d from line.c making smooth.d from smooth.c making prho.d from prho.c making swilk.d from swilk.c making ksmooth.d from ksmooth.c making loessc.d from loessc.c making monoSpl.d from monoSpl.c making isoreg.d from isoreg.c making Srunmed.d from Srunmed.c making dblcen.d from dblcen.c making distance.d from distance.c making hclust-utils.d from hclust-utils.c making nls.d from nls.c making rWishart.d from rWishart.c making HoltWinters.d from HoltWinters.c making PPsum.d from PPsum.c making arima.d from arima.c making burg.d from burg.c making filter.d from filter.c making mAR.d from mAR.c making pacf.d from pacf.c making starma.d from starma.c making port.d from port.c making family.d from family.c making sbart.d from sbart.c making approx.d from approx.c making loglin.d from loglin.c making lowess.d from lowess.c making massdist.d from massdist.c making splines.d from splines.c making lm.d from lm.c making complete_cases.d from complete_cases.c making cov.d from cov.c making deriv.d from deriv.c making fft.d from fft.c making fourier.d from fourier.c making model.d from model.c making optim.d from optim.c making optimize.d from optimize.c making integrate.d from integrate.c making random.d from random.c making distn.d from distn.c making zeroin.d from zeroin.c making rcont.d from rcont.c making influence.d from influence.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c kmeans.c -o kmeans.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c ansari.c -o ansari.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c bandwidths.c -o bandwidths.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c chisqsim.c -o chisqsim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c d2x2xk.c -o d2x2xk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c fexact.c -o fexact.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c kendall.c -o kendall.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c ks.c -o ks.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c line.c -o line.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c smooth.c -o smooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c prho.c -o prho.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c swilk.c -o swilk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c ksmooth.c -o ksmooth.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c loessc.c -o loessc.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c monoSpl.c -o monoSpl.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c isoreg.c -o isoreg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c Srunmed.c -o Srunmed.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c dblcen.c -o dblcen.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c distance.c -o distance.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c hclust-utils.c -o hclust-utils.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c nls.c -o nls.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rWishart.c -o rWishart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c HoltWinters.c -o HoltWinters.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c PPsum.c -o PPsum.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c arima.c -o arima.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c burg.c -o burg.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c filter.c -o filter.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c mAR.c -o mAR.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c pacf.c -o pacf.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c starma.c -o starma.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c port.c -o port.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c family.c -o family.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c sbart.c -o sbart.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c approx.c -o approx.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c loglin.c -o loglin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c lowess.c -o lowess.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c massdist.c -o massdist.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c splines.c -o splines.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c lm.c -o lm.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c complete_cases.c -o complete_cases.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c cov.c -o cov.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c deriv.c -o deriv.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c fft.c -o fft.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c fourier.c -o fourier.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c model.c -o model.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c optim.c -o optim.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c optimize.c -o optimize.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c integrate.c -o integrate.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c random.c -o random.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c distn.c -o distn.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c zeroin.c -o zeroin.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rcont.c -o rcont.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c influence.c -o influence.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c bsplvd.f -o bsplvd.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c bvalue.f -o bvalue.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c bvalus.f -o bvalus.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c loessf.f -o loessf.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c ppr.f -o ppr.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c qsbart.f -o qsbart.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c sgram.f -o sgram.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c sinerp.f -o sinerp.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c sslvrg.f -o sslvrg.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c stxwx.f -o stxwx.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c hclust.f -o hclust.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c kmns.f -o kmns.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c eureka.f -o eureka.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c stl.f -o stl.o gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c portsrc.f -o portsrc.o gfortran -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -c lminfl.f -o lminfl.o gcc -shared -L../../../../lib -Wl,-z,relro -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -llapack -lblas -lgfortran -lm -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' mkdir -p -- ../../../../library/stats/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' byte-compiling package 'stats' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' building package 'datasets' mkdir -p -- ../../../library/datasets make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' mkdir -p -- ../../../library/datasets/data make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' building package 'methods' mkdir -p -- ../../../library/methods make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' mkdir -p -- ../../../library/methods/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' making do_substitute_direct.d from do_substitute_direct.c making init.d from init.c making methods_list_dispatch.d from methods_list_dispatch.c making slot.d from slot.c making class_support.d from class_support.c making tests.d from tests.c making utils.d from utils.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c do_substitute_direct.c -o do_substitute_direct.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c methods_list_dispatch.c -o methods_list_dispatch.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c slot.c -o slot.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c class_support.c -o class_support.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c tests.c -o tests.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c utils.c -o utils.o gcc -shared -L../../../../lib -Wl,-z,relro -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' mkdir -p -- ../../../../library/methods/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' byte-compiling package 'methods' initializing class and method definitions ... done make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' building package 'grid' mkdir -p -- ../../../library/grid mkdir -p -- ../../../library/grid/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' mkdir -p -- ../../../library/grid/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' making clippath.d from clippath.c making gpar.d from gpar.c making grid.d from grid.c making just.d from just.c making layout.d from layout.c making mask.d from mask.c making matrix.d from matrix.c making path.d from path.c making register.d from register.c making state.d from state.c making typeset.d from typeset.c making unit.d from unit.c making util.d from util.c making viewport.d from viewport.c gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c clippath.c -o clippath.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c gpar.c -o gpar.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c grid.c -o grid.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c just.c -o just.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c layout.c -o layout.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c mask.c -o mask.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c matrix.c -o matrix.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c path.c -o path.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c register.c -o register.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c state.c -o state.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c typeset.c -o typeset.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c unit.c -o unit.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c util.c -o util.o gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c viewport.c -o viewport.o gcc -shared -L../../../../lib -Wl,-z,relro -o grid.so clippath.o gpar.o grid.o just.o layout.o mask.o matrix.o path.o register.o state.o typeset.o unit.o util.o viewport.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' mkdir -p -- ../../../../library/grid/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' byte-compiling package 'grid' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' building package 'splines' mkdir -p -- ../../../library/splines make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' mkdir -p -- ../../../library/splines/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' making splines.d from splines.c gcc -I"../../../../include" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c splines.c -o splines.o gcc -shared -L../../../../lib -Wl,-z,relro -o splines.so splines.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' mkdir -p -- ../../../../library/splines/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' byte-compiling package 'splines' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' building package 'stats4' mkdir -p -- ../../../library/stats4 make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' mkdir -p -- ../../../library/stats4/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' byte-compiling package 'stats4' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' building package 'tcltk' mkdir -p -- ../../../library/tcltk/R make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' mkdir -p -- ../../../library/tcltk/exec make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' making init.d from init.c making tcltk.d from tcltk.c making tcltk_unix.d from tcltk_unix.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c tcltk.c -o tcltk.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/include/tcl8.6 -I/usr/include/tcl8.6 -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c tcltk_unix.c -o tcltk_unix.o gcc -shared -L../../../../lib -Wl,-z,relro -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib/arm-linux-gnueabihf -ltcl8.6 -L/usr/lib/arm-linux-gnueabihf -ltk8.6 -lX11 -lXss -lXext -lm -L../../../../lib -lR make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' mkdir -p -- ../../../../library/tcltk/libs make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' byte-compiling package 'tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' building package 'parallel' mkdir -p -- ../../../library/parallel mkdir -p -- ../../../library/parallel/doc make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' mkdir -p -- ../../../library/parallel/R make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' making init.d from init.c making rngstream.d from rngstream.c making fork.d from fork.c gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c rngstream.c -o rngstream.o gcc -I"../../../../include" -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c fork.c -o fork.o gcc -shared -L../../../../lib -Wl,-z,relro -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' mkdir -p -- ../../../../library/parallel/libs make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' byte-compiling package 'parallel' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' you should 'make docs' now ... make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' (cd src/nmath/standalone; \ /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -D_REENTRANT" \ CC=gcc \ CXX=g++ \ F77=gfortran \ R_GZIPCMD="/bin/gzip -n" \ libRmath_la_LDFLAGS=-Wl,-soname,libRmath.so.1 \ shared static ) make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' (cd ../../include; /usr/bin/make Rmath.h) make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[2]: 'Rmath.h' is up to date. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' Copying source files make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' making mlutils.d from mlutils.c making d1mach.d from d1mach.c making i1mach.d from i1mach.c making fmax2.d from fmax2.c making fmin2.d from fmin2.c making fprec.d from fprec.c making fround.d from fround.c making ftrunc.d from ftrunc.c making sign.d from sign.c making fsign.d from fsign.c making imax2.d from imax2.c making imin2.d from imin2.c making chebyshev.d from chebyshev.c making log1p.d from log1p.c making lgammacor.d from lgammacor.c making gammalims.d from gammalims.c making stirlerr.d from stirlerr.c making bd0.d from bd0.c making gamma.d from gamma.c making lgamma.d from lgamma.c making gamma_cody.d from gamma_cody.c making beta.d from beta.c making lbeta.d from lbeta.c making polygamma.d from polygamma.c making cospi.d from cospi.c making bessel_i.d from bessel_i.c making bessel_j.d from bessel_j.c making bessel_k.d from bessel_k.c making bessel_y.d from bessel_y.c making choose.d from choose.c making snorm.d from snorm.c making sexp.d from sexp.c making dgamma.d from dgamma.c making pgamma.d from pgamma.c making qgamma.d from qgamma.c making rgamma.d from rgamma.c making dbeta.d from dbeta.c making pbeta.d from pbeta.c making qbeta.d from qbeta.c making rbeta.d from rbeta.c making dunif.d from dunif.c making punif.d from punif.c making qunif.d from qunif.c making runif.d from runif.c making dnorm.d from dnorm.c making pnorm.d from pnorm.c making qnorm.d from qnorm.c making rnorm.d from rnorm.c making dlnorm.d from dlnorm.c making plnorm.d from plnorm.c making qlnorm.d from qlnorm.c making rlnorm.d from rlnorm.c making df.d from df.c making pf.d from pf.c making qf.d from qf.c making rf.d from rf.c making dnf.d from dnf.c making dt.d from dt.c making pt.d from pt.c making qt.d from qt.c making rt.d from rt.c making dnt.d from dnt.c making dchisq.d from dchisq.c making pchisq.d from pchisq.c making qchisq.d from qchisq.c making rchisq.d from rchisq.c making rnchisq.d from rnchisq.c making dbinom.d from dbinom.c making pbinom.d from pbinom.c making qbinom.d from qbinom.c making rbinom.d from rbinom.c making rmultinom.d from rmultinom.c making dcauchy.d from dcauchy.c making pcauchy.d from pcauchy.c making qcauchy.d from qcauchy.c making rcauchy.d from rcauchy.c making dexp.d from dexp.c making pexp.d from pexp.c making qexp.d from qexp.c making rexp.d from rexp.c making dgeom.d from dgeom.c making pgeom.d from pgeom.c making qgeom.d from qgeom.c making rgeom.d from rgeom.c making dhyper.d from dhyper.c making phyper.d from phyper.c making qhyper.d from qhyper.c making rhyper.d from rhyper.c making dnbinom.d from dnbinom.c making pnbinom.d from pnbinom.c making qnbinom.d from qnbinom.c making qnbinom_mu.d from qnbinom_mu.c making rnbinom.d from rnbinom.c making dpois.d from dpois.c making ppois.d from ppois.c making qpois.d from qpois.c making rpois.d from rpois.c making dweibull.d from dweibull.c making pweibull.d from pweibull.c making qweibull.d from qweibull.c making rweibull.d from rweibull.c making dlogis.d from dlogis.c making plogis.d from plogis.c making qlogis.d from qlogis.c making rlogis.d from rlogis.c making dnchisq.d from dnchisq.c making pnchisq.d from pnchisq.c making qnchisq.d from qnchisq.c making dnbeta.d from dnbeta.c making pnbeta.d from pnbeta.c making qnbeta.d from qnbeta.c making pnf.d from pnf.c making pnt.d from pnt.c making qnf.d from qnf.c making qnt.d from qnt.c making ptukey.d from ptukey.c making qtukey.d from qtukey.c making toms708.d from toms708.c making wilcox.d from wilcox.c making signrank.d from signrank.c making std_unif.d from std_unif.c make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c mlutils.c -o mlutils.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c d1mach.c -o d1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c i1mach.c -o i1mach.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmax2.c -o fmax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmin2.c -o fmin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fprec.c -o fprec.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fround.c -o fround.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ftrunc.c -o ftrunc.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sign.c -o sign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fsign.c -o fsign.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imax2.c -o imax2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imin2.c -o imin2.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c chebyshev.c -o chebyshev.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c log1p.c -o log1p.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgammacor.c -o lgammacor.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gammalims.c -o gammalims.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c stirlerr.c -o stirlerr.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bd0.c -o bd0.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma.c -o gamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgamma.c -o lgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma_cody.c -o gamma_cody.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c beta.c -o beta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lbeta.c -o lbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c polygamma.c -o polygamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c cospi.c -o cospi.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_i.c -o bessel_i.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_j.c -o bessel_j.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_k.c -o bessel_k.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_y.c -o bessel_y.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c choose.c -o choose.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c snorm.c -o snorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sexp.c -o sexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgamma.c -o dgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgamma.c -o pgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgamma.c -o qgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgamma.c -o rgamma.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbeta.c -o dbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbeta.c -o pbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbeta.c -o qbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbeta.c -o rbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dunif.c -o dunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c punif.c -o punif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qunif.c -o qunif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c runif.c -o runif.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnorm.c -o dnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnorm.c -o pnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnorm.c -o qnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnorm.c -o rnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlnorm.c -o dlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plnorm.c -o plnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlnorm.c -o qlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlnorm.c -o rlnorm.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c df.c -o df.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pf.c -o pf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qf.c -o qf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rf.c -o rf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnf.c -o dnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dt.c -o dt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pt.c -o pt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qt.c -o qt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rt.c -o rt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnt.c -o dnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dchisq.c -o dchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pchisq.c -o pchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qchisq.c -o qchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rchisq.c -o rchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnchisq.c -o rnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbinom.c -o dbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbinom.c -o pbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbinom.c -o qbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbinom.c -o rbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rmultinom.c -o rmultinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dcauchy.c -o dcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pcauchy.c -o pcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qcauchy.c -o qcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rcauchy.c -o rcauchy.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dexp.c -o dexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pexp.c -o pexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qexp.c -o qexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rexp.c -o rexp.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgeom.c -o dgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgeom.c -o pgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgeom.c -o qgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgeom.c -o rgeom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dhyper.c -o dhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c phyper.c -o phyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qhyper.c -o qhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rhyper.c -o rhyper.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbinom.c -o dnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbinom.c -o pnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom.c -o qnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom_mu.c -o qnbinom_mu.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnbinom.c -o rnbinom.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dpois.c -o dpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ppois.c -o ppois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qpois.c -o qpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rpois.c -o rpois.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dweibull.c -o dweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pweibull.c -o pweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qweibull.c -o qweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rweibull.c -o rweibull.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlogis.c -o dlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plogis.c -o plogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlogis.c -o qlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlogis.c -o rlogis.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnchisq.c -o dnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnchisq.c -o pnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnchisq.c -o qnchisq.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbeta.c -o dnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbeta.c -o pnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbeta.c -o qnbeta.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnf.c -o pnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnt.c -o pnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnf.c -o qnf.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnt.c -o qnt.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ptukey.c -o ptukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qtukey.c -o qtukey.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c toms708.c -o toms708.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c wilcox.c -o wilcox.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c signrank.c -o signrank.lo gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c std_unif.c -o std_unif.lo gcc -shared -fopenmp -Wl,-z,relro -o libRmath.so -Wl,-soname,libRmath.so.1 mlutils.lo d1mach.lo i1mach.lo fmax2.lo fmin2.lo fprec.lo fround.lo ftrunc.lo sign.lo fsign.lo imax2.lo imin2.lo chebyshev.lo log1p.lo lgammacor.lo gammalims.lo stirlerr.lo bd0.lo gamma.lo lgamma.lo gamma_cody.lo beta.lo lbeta.lo polygamma.lo cospi.lo bessel_i.lo bessel_j.lo bessel_k.lo bessel_y.lo choose.lo snorm.lo sexp.lo dgamma.lo pgamma.lo qgamma.lo rgamma.lo dbeta.lo pbeta.lo qbeta.lo rbeta.lo dunif.lo punif.lo qunif.lo runif.lo dnorm.lo pnorm.lo qnorm.lo rnorm.lo dlnorm.lo plnorm.lo qlnorm.lo rlnorm.lo df.lo pf.lo qf.lo rf.lo dnf.lo dt.lo pt.lo qt.lo rt.lo dnt.lo dchisq.lo pchisq.lo qchisq.lo rchisq.lo rnchisq.lo dbinom.lo pbinom.lo qbinom.lo rbinom.lo rmultinom.lo dcauchy.lo pcauchy.lo qcauchy.lo rcauchy.lo dexp.lo pexp.lo qexp.lo rexp.lo dgeom.lo pgeom.lo qgeom.lo rgeom.lo dhyper.lo phyper.lo qhyper.lo rhyper.lo dnbinom.lo pnbinom.lo qnbinom.lo qnbinom_mu.lo rnbinom.lo dpois.lo ppois.lo qpois.lo rpois.lo dweibull.lo pweibull.lo qweibull.lo rweibull.lo dlogis.lo plogis.lo qlogis.lo rlogis.lo dnchisq.lo pnchisq.lo qnchisq.lo dnbeta.lo pnbeta.lo qnbeta.lo pnf.lo pnt.lo qnf.lo qnt.lo ptukey.lo qtukey.lo toms708.lo wilcox.lo signrank.lo std_unif.lo -lm make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c mlutils.c -o mlutils.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c d1mach.c -o d1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c i1mach.c -o i1mach.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmax2.c -o fmax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fmin2.c -o fmin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fprec.c -o fprec.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fround.c -o fround.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ftrunc.c -o ftrunc.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sign.c -o sign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c fsign.c -o fsign.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imax2.c -o imax2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c imin2.c -o imin2.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c chebyshev.c -o chebyshev.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c log1p.c -o log1p.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgammacor.c -o lgammacor.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gammalims.c -o gammalims.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c stirlerr.c -o stirlerr.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bd0.c -o bd0.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma.c -o gamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lgamma.c -o lgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c gamma_cody.c -o gamma_cody.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c beta.c -o beta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c lbeta.c -o lbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c polygamma.c -o polygamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c cospi.c -o cospi.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_i.c -o bessel_i.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_j.c -o bessel_j.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_k.c -o bessel_k.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c bessel_y.c -o bessel_y.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c choose.c -o choose.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c snorm.c -o snorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c sexp.c -o sexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgamma.c -o dgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgamma.c -o pgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgamma.c -o qgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgamma.c -o rgamma.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbeta.c -o dbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbeta.c -o pbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbeta.c -o qbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbeta.c -o rbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dunif.c -o dunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c punif.c -o punif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qunif.c -o qunif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c runif.c -o runif.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnorm.c -o dnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnorm.c -o pnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnorm.c -o qnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnorm.c -o rnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlnorm.c -o dlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plnorm.c -o plnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlnorm.c -o qlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlnorm.c -o rlnorm.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c df.c -o df.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pf.c -o pf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qf.c -o qf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rf.c -o rf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnf.c -o dnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dt.c -o dt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pt.c -o pt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qt.c -o qt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rt.c -o rt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnt.c -o dnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dchisq.c -o dchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pchisq.c -o pchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qchisq.c -o qchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rchisq.c -o rchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnchisq.c -o rnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dbinom.c -o dbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pbinom.c -o pbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qbinom.c -o qbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rbinom.c -o rbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rmultinom.c -o rmultinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dcauchy.c -o dcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pcauchy.c -o pcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qcauchy.c -o qcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rcauchy.c -o rcauchy.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dexp.c -o dexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pexp.c -o pexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qexp.c -o qexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rexp.c -o rexp.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dgeom.c -o dgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pgeom.c -o pgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qgeom.c -o qgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rgeom.c -o rgeom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dhyper.c -o dhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c phyper.c -o phyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qhyper.c -o qhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rhyper.c -o rhyper.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbinom.c -o dnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbinom.c -o pnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom.c -o qnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbinom_mu.c -o qnbinom_mu.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rnbinom.c -o rnbinom.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dpois.c -o dpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ppois.c -o ppois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qpois.c -o qpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rpois.c -o rpois.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dweibull.c -o dweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pweibull.c -o pweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qweibull.c -o qweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rweibull.c -o rweibull.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dlogis.c -o dlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c plogis.c -o plogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qlogis.c -o qlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c rlogis.c -o rlogis.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnchisq.c -o dnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnchisq.c -o pnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnchisq.c -o qnchisq.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c dnbeta.c -o dnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnbeta.c -o pnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnbeta.c -o qnbeta.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnf.c -o pnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c pnt.c -o pnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnf.c -o qnf.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qnt.c -o qnt.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c ptukey.c -o ptukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c qtukey.c -o qtukey.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c toms708.c -o toms708.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c wilcox.c -o wilcox.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c signrank.c -o signrank.o gcc -I. -I../../../src/include -I../../../src/include -I./.. -DHAVE_CONFIG_H -DMATHLIB_STANDALONE -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/nmath/standalone=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -c std_unif.c -o std_unif.o ar -cr libRmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o std_unif.o ranlib libRmath.a make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' R_GZIPCMD="/bin/gzip -n" \ /usr/bin/make docs R_CMD_BUILD_HELP_OPTS="--txt --example" make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[4]: Nothing to be done for 'R'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'Makedeps' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'libtre.a' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: 'libappl.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: 'libnmath.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: 'libunix.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -std=gnu23 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.0"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/lib/libR.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/bin/exec/R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: 'internet.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: 'lapack.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: 'R_X11.so' is up to date. make[5]: 'R_de.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' /build/reproducible-path/r-base-4.5.0/modules/R_X11.so is unchanged /build/reproducible-path/r-base-4.5.0/modules/R_de.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' building system startup profile make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' building package 'translations' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' building package 'tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' all.R is unchanged make[5]: '../../../library/tools/wre.txt' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' ../../../../library/tools/libs/tools.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' building package 'compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' building package 'utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' all.R is unchanged make[5]: Nothing to be done for 'iconvlist'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' ../../../../library/utils/libs/utils.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' building package 'grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' ../../../../library/grDevices/libs/grDevices.so is unchanged make[8]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: 'cairo.so' is up to date. make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' building package 'graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' ../../../../library/graphics/libs/graphics.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' building package 'stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' ../../../../library/stats/libs/stats.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' building package 'datasets' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' building package 'methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' ../../../../library/methods/libs/methods.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Nothing to be done for 'RfilesLazy'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' building package 'grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' ../../../../library/grid/libs/grid.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' building package 'splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' ../../../../library/splines/libs/splines.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' building package 'stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' building package 'tcltk' all.R is unchanged make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' ../../../../library/tcltk/libs/tcltk.so is unchanged make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' building package 'parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' ../../../../library/parallel/libs/parallel.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' you should 'make docs' now ... make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' creating doc/NEWS creating doc/NEWS.pdf make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' creating doc/manual/R-FAQ.html creating doc/manual/version.texi creating doc/manual/R-admin.html creating doc/manual/R-data.html creating doc/manual/R-exts.html creating doc/manual/R-intro.html creating doc/manual/R-ints.html creating doc/manual/R-lang.html make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' installing parsed Rd make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' base stats utils methods graphics grDevices datasets grid tools tcltk splines stats4 compiler parallel make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' building/updating package metadata ... make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' writing package indices make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' /usr/bin/make javaconf make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[4]: Nothing to be done for 'R'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'Makedeps' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[5]: 'libtre.a' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[4]: 'libappl.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[4]: 'libnmath.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: 'libunix.a' is up to date. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -std=gnu23 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/build/reproducible-path/r-base-4.5.0"' \ -o Rscript ./Rscript.c make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/lib/libR.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' /build/reproducible-path/r-base-4.5.0/bin/exec/R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[5]: 'internet.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[5]: 'lapack.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: 'R_X11.so' is up to date. make[5]: 'R_de.so' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' /build/reproducible-path/r-base-4.5.0/modules/R_X11.so is unchanged /build/reproducible-path/r-base-4.5.0/modules/R_de.so is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' building system startup profile make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/profile' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' building package 'translations' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/translations' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' building package 'base' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' building package 'tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' all.R is unchanged make[5]: '../../../library/tools/wre.txt' is up to date. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' ../../../../library/tools/libs/tools.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' building package 'compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/compiler' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tools' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' building package 'utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' all.R is unchanged make[5]: Nothing to be done for 'iconvlist'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' ../../../../library/utils/libs/utils.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' installing 'sysdata.rda' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/utils' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' building package 'grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' ../../../../library/grDevices/libs/grDevices.so is unchanged make[8]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[10]: 'cairo.so' is up to date. make[10]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[9]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[8]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src/cairo' make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grDevices' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' building package 'graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' ../../../../library/graphics/libs/graphics.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/graphics' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' building package 'stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' ../../../../library/stats/libs/stats.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' building package 'datasets' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/datasets' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' building package 'methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' ../../../../library/methods/libs/methods.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[5]: Nothing to be done for 'RfilesLazy'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/methods' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' building package 'grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' ../../../../library/grid/libs/grid.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/grid' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' building package 'splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' ../../../../library/splines/libs/splines.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/splines' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' building package 'stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/stats4' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' building package 'tcltk' all.R is unchanged make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' ../../../../library/tcltk/libs/tcltk.so is unchanged make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk/src' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/tcltk' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' building package 'parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' all.R is unchanged make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[6]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[7]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' ../../../../library/parallel/libs/parallel.so is unchanged make[7]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[6]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel/src' make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[5]: Nothing to be done for 'mklazycomp'. make[5]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/parallel' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library/base' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library/base' installing parsed NAMESPACE files make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0' configuring Java ... Java interpreter : /usr/lib/jvm/default-java/bin/java Java version : 21.0.7 Java home path : /usr/lib/jvm/default-java Java compiler : /usr/lib/jvm/default-java/bin/javac Java headers gen.: Java archive tool: /usr/lib/jvm/default-java/bin/jar trying to compile and link a JNI program detected JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm using C compiler: ‘gcc (Debian 14.2.0-19) 14.2.0’ make[3]: Entering directory '/tmp/Rjavareconf.9HYRqb' gcc -std=gnu23 -I"/build/reproducible-path/r-base-4.5.0/include" -DNDEBUG -I/usr/lib/jvm/default-java/include -I/usr/lib/jvm/default-java/include/linux -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -c conftest.c -o conftest.o gcc -std=gnu23 -shared -L/build/reproducible-path/r-base-4.5.0/lib -Wl,-z,relro -o conftest.so conftest.o -L/usr/lib/jvm/default-java/lib/server -ljvm -L/build/reproducible-path/r-base-4.5.0/lib -lR make[3]: Leaving directory '/tmp/Rjavareconf.9HYRqb' JAVA_HOME : /usr/lib/jvm/default-java Java library path: $(JAVA_HOME)/lib/server JNI cpp flags : -I$(JAVA_HOME)/include -I$(JAVA_HOME)/include/linux JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm Updating Java configuration in /build/reproducible-path/r-base-4.5.0 Done. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' touch make-arch-stamp *** install-arch *** dh_testdir dh_testroot dh_prep -a dh_installdirs -A /build/reproducible-path/r-base-4.5.0/debian/r-base-core /usr/bin/make DESTDIR=/build/reproducible-path/r-base-4.5.0/debian/r-base-core install make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/m4' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tools' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc' installing doc ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/man/man1 make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/html' installing doc/html ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/html make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/html' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' installing doc/manual ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/manual mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/manual/images make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/etc' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/etc installing etc ... make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/etc' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/share' installing share ... mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/R mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/dictionaries mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/encodings mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/java mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/licenses mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/make mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/Rd mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/Rd/macros mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/sh mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf/bibtex/bib mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf/bibtex/bst mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/texmf/tex/latex make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/share' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/scripts' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/bin make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/scripts' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/include/R_ext make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include/R_ext' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/blas' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/blas' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tre' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/tzone' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/tzone' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/xdr' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/xdr' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/extra/intl' make[4]: Nothing to be done for 'install'. make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra/intl' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/extra' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/appl' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -std=gnu23 -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -DR_HOME='"/usr/lib/R"' \ -o Rscript ./Rscript.c mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/pkgconfig make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/bin/exec make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/main' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/lib make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/main' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/modules make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/internet' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/lapack' make[4]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[4]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules/X11' make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/modules' make[3]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/library' mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/library installing packages ... building HTML index ... make[3]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/library' make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/tests' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/tests' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' (cd src/unix; \ rm -vf Rscript /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript; \ /usr/bin/make CFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ CXXFLAGS="`DEB_BUILD_MAINT_OPTIONS=optimize=-lto dpkg-buildflags --get CXXFLAGS` -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT" \ FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0=. -fstack-protector-strong -fstack-clash-protection -D_REENTRANT" \ CC=gcc \ CXX=g++ \ F77=gfortran \ RHOME=/usr/lib/R \ DESTDIR=/build/reproducible-path/r-base-4.5.0/debian/r-base-core \ install-Rscript ) removed 'Rscript' removed '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript' make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/unix' gcc -I. -I../../src/include -I../../src/include -DHAVE_CONFIG_H -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.5.0/src/unix=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -D_REENTRANT -Wl,-z,relro -DR_HOME='"/usr/lib/R"' \ -o Rscript ./Rscript.c make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/unix' #ls -ltr /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/ #strings src/unix/Rscript cp -vax src/unix/Rscript /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/ 'src/unix/Rscript' -> '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript' #ls -ltr /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/ #strings /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/bin/Rscript (cd src/nmath/standalone; \ /usr/bin/make DESTDIR=/build/reproducible-path/r-base-4.5.0/debian/r-base-core install ) make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/src/include' make[2]: 'Rmath.h' is up to date. make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/include' /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/include/Rmath.h is unchanged make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0/src/nmath/standalone' chmod a+x /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/share/sh/echo.sh rm -v /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/COPYING removed '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/COPYING' (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/; \ ln -s ../../share/common-licenses/GPL-2 COPYING) rm -v /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/COPYING removed '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc/COPYING' (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc; \ ln -s ../../../share/common-licenses/GPL-2 COPYING) (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/texmf/tex/latex && \ ln -s ../../../R/share/texmf R) dh_movefiles --sourcedir=debian/r-base-core -pr-doc-html dh_movefiles --sourcedir=debian/r-base-core -pr-base-html make prefix=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr \ rdocdir=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/R/doc \ install-pdf make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' creating doc/manual/version.tex collecting LaTeX docs for package 'base' ... Converting parsed Rd's to LaTeX ............................................ collecting LaTeX docs for package 'tools' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'utils' ... Converting parsed Rd's to LaTeX ................ collecting LaTeX docs for package 'grDevices' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'graphics' ... Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'stats' ... Converting parsed Rd's to LaTeX ............................... collecting LaTeX docs for package 'datasets' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'methods' ... Converting parsed Rd's to LaTeX ........ collecting LaTeX docs for package 'grid' ... Converting parsed Rd's to LaTeX .......... collecting LaTeX docs for package 'splines' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'stats4' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'tcltk' ... Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'compiler' ... Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'parallel' ... Converting parsed Rd's to LaTeX . PDF/LaTeX documentation: full reference index ... This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdflatex) restricted \write18 enabled. entering extended mode (./fullrefman.tex LaTeX2e <2024-11-01> patch level 2 L3 programming layer <2025-01-18> (/usr/share/texlive/texmf-dist/tex/latex/base/book.cls Document Class: book 2024/06/29 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/bk10.clo)) (../../share/texmf/tex/latex/Rd.sty (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/bm.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/verbatim.sty) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. 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(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty (/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg)) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd) (./version.tex) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd) [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}{/usr/share/texlive/texmf- dist/fonts/enc/dvips/base/8r.enc}] No file fullrefman.toc. (./base-pkg.tex Chapter 1. (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/t1zi4.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) (/usr/share/texlive/texmf-dist/tex/latex/jknapltx/ursfs.fd) [1{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-t1-0.enc}] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2285--2285 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2639--2639 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2957--2961 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3443--3446 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4239--4241 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5588--5590 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6871--6871 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7798--7803 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8531--8535 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8646--8649 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8963--8974 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1629) in paragraph at lines 9394--9406 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9394--9406 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25098--25104 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25098--25104 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25938--25941 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26145--26151 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26535--26538 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27163--27165 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27654--27662 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28084--28087 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28109--28111 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28250--28254 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28307--28312 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28619--28622 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28645--28647 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28691--28696 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28709--28712 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29124--29128 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29271--29274 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29352--29356 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29352--29356 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29357--29366 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30377--30380 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32188--32191 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32359--32370 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32907--32909 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34057--34059 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34060--34064 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34662--34664 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35869--35874 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36945--36949 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37036--37047 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38675--38677 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39093--39097 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39339--39343 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39344--39348 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39399--39406 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39634--39638 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41182--41190 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41192--41194 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41802--41808 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41820--41825 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41943--41948 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42490--42493 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42702. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43441--43445 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44635--44638 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45551--45559 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45551--45559 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 46992--46995 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47125--47129 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47251--47253 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47337--47342 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47585--47587 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 47987--47991 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48048--48052 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3775--3775 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} [914] [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4756--4761 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5255--5261 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5384--5387 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5445--5447 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6120 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1076] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10432--10435 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10510--10514 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] Underfull \hbox (badness 2503) in paragraph at lines 3571--3574 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1497] [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3684. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 3989) in paragraph at lines 4830--4837 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 2556) in paragraph at lines 5484--5487 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1527] [1528] [1529] [1530] [1531] [1532] [1533] Underfull \hbox (badness 2503) in paragraph at lines 5896--5900 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] Underfull \hbox (badness 7081) in paragraph at lines 6695--6698 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6699--6701 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1547] [1548] [1549] [1550] [1551] [1552] Underfull \vbox (badness 10000) has occurred while \output is active [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 10000) in paragraph at lines 7595--7598 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1561] [1562] [1563] [1564] [1565] [1566] Underfull \vbox (badness 3803) has occurred while \output is active [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1960) in paragraph at lines 8472--8475 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1576] [1577] [1578] [1579] [1580] [1581] [1582] Underfull \vbox (badness 3803) has occurred while \output is active [1583] [1584] [1585] [1586] [1587] [1588] Underfull \hbox (badness 2626) in paragraph at lines 9295--9298 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1589] Underfull \hbox (badness 2503) in paragraph at lines 9402--9406 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1590] [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] Underfull \hbox (badness 4518) in paragraph at lines 10750--10755 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 2142) in paragraph at lines 11112--11115 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11131--11134 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1616] Underfull \hbox (badness 1708) in paragraph at lines 11193--11197 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 1694) in paragraph at lines 11591--11594 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12089 \aliasA{hat}{influence.measures}{hat} [1631] [1632] Underfull \hbox (badness 1484) in paragraph at lines 12234--12236 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 10000) in paragraph at lines 12821--12823 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1643] [1644] [1645] [1646] [1647] [1648] Underfull \hbox (badness 2894) in paragraph at lines 13163--13167 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1649] [1650] [1651] [1652] [1653] [1654] Underfull \hbox (badness 1496) in paragraph at lines 13591--13597 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 4518) in paragraph at lines 13994--13999 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] Underfull \hbox (badness 1596) in paragraph at lines 14625--14628 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1671] Underfull \hbox (badness 4518) in paragraph at lines 14683--14688 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1672] [1673] [1674] Underfull \hbox (badness 6412) in paragraph at lines 14823--14827 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14830--14832 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \hbox (badness 2503) in paragraph at lines 15907--15911 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 10000) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] Underfull \hbox (badness 1158) in paragraph at lines 18078--18081 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1728] [1729] Underfull \vbox (badness 10000) has occurred while \output is active [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] Underfull \hbox (badness 1377) in paragraph at lines 19123--19128 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19128--19131 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19141--19145 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19141--19145 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19149--19153 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19374--19374 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19377--19377 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1749] [1750] [1751] [1752] [1753] [1754] [1755] Underfull \hbox (badness 1337) in paragraph at lines 19839--19842 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 10000) in paragraph at lines 20308--20314 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1765] [1766] [1767] [1768] [1769] [1770] [1771] Underfull \hbox (badness 1194) in paragraph at lines 20735--20738 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 2503) in paragraph at lines 21113--21116 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21140--21142 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1778] [1779] [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] Underfull \hbox (badness 10000) in paragraph at lines 22218--22224 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1796] [1797] [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] Underfull \hbox (badness 1337) in paragraph at lines 23694--23700 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1821] [1822] [1823] [1824] [1825] [1826] [1827] [1828] Underfull \hbox (badness 1436) in paragraph at lines 24186--24189 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24189--24192 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1829] [1830] Underfull \hbox (badness 10000) in paragraph at lines 24341--24342 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] Underfull \hbox (badness 1824) in paragraph at lines 25313--25319 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25313--25319 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25334--25337 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \hbox (badness 2165) in paragraph at lines 25909--25914 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1857] [1858] [1859] Underfull \hbox (badness 1867) in paragraph at lines 26119--26121 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26135--26139 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1860] [1861] [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] Underfull \vbox (badness 10000) has occurred while \output is active [1886] Underfull \hbox (badness 3514) in paragraph at lines 27787--27792 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1887] [1888] [1889] [1890] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28021--28021 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1891] Underfull \hbox (badness 3514) in paragraph at lines 28057--28063 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1892] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28117--28117 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1893] [1894] [1895] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28377--28382 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] Underfull \hbox (badness 3514) in paragraph at lines 28442--28447 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1899] [1900] Underfull \hbox (badness 3514) in paragraph at lines 28536--28541 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] Underfull \hbox (badness 6691) in paragraph at lines 28628--28633 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1902] [1903] [1904] [1905] [1906] [1907] [1908] [1909] Underfull \hbox (badness 4024) in paragraph at lines 29115--29118 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 5431) in paragraph at lines 29725--29727 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1920] [1921] [1922] [1923] Underfull \hbox (badness 5431) in paragraph at lines 29935--29938 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1924] [1925] [1926] [1927] [1928] Underfull \hbox (badness 1337) in paragraph at lines 30250--30254 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1929] [1930] [1931] Underfull \hbox (badness 1127) in paragraph at lines 30387--30390 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1932] [1933] [1934] Underfull \hbox (badness 1616) in paragraph at lines 30593--30596 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] Underfull \hbox (badness 3557) in paragraph at lines 31823--31827 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] [1959] [1960] Underfull \hbox (badness 1337) in paragraph at lines 32190--32194 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] Underfull \hbox (badness 1337) in paragraph at lines 32718--32722 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1970] [1971] [1972] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32926--32926 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1973] [1974] [1975] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33087--33087 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1976] [1977] [1978] [1979] [1980]) (./stats4-pkg.tex Chapter 11. [1981] [1982] [1983] Underfull \vbox (badness 10000) has occurred while \output is active [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] [1986] [1987] [1988] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1989] [1990] [1991]) (./tcltk-pkg.tex [1992] Chapter 12. [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \vbox (badness 10000) has occurred while \output is active [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2002] [2003] [2004] [2005] [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] [2012] [2013] [2014]) (./tools-pkg.tex Chapter 13. [2015] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2016] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2017] [2018] [2019] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2020] [2021] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2022] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2023] [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2036] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2037] [2038] [2039] [2040] [2041] [2042] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2043] [2044] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2045] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2046] [2047] [2048] [2049] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2050] [2051] [2052] [2053] [2054] [2055] [2056] [2057] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2058] [2059] [2060] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2077] [2078] [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2089] [2090] [2091] [2092] [2093] [2094] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4913--4913 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2095] [2096] [2097] Underfull \hbox (badness 1796) in paragraph at lines 5122--5127 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2098] Underfull \hbox (badness 1838) in paragraph at lines 5208--5214 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 5208--5214 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [2099] [2100] [2101] [2102] [2103] [2104] Underfull \hbox (badness 2197) in paragraph at lines 5560--5570 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [2105] Underfull \hbox (badness 1571) in paragraph at lines 5626--5630 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [2106] [2107] [2108] [2109]) (./utils-pkg.tex [2110] Chapter 14. [2111] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2112] [2113] [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2122] [2123] [2124] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2125] [2126] [2127] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2128] [2129] [2130] Underfull \vbox (badness 3803) has occurred while \output is active [2131] [2132] [2133] [2134] [2135] [2136] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2137] [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2148] [2149] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2150] [2151] [2152] [2153] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2175] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2176] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2177] [2178] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2200] [2201] [2202] [2203] [2204] [2205] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2214] [2215] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2216] [2217] [2218] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2219] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2220] [2221] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2222] [2223] Underfull \hbox (badness 1325) in paragraph at lines 7250--7254 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2224] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2225] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2226] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2227] Underfull \hbox (badness 1024) in paragraph at lines 7561--7564 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2228] Underfull \hbox (badness 10000) in paragraph at lines 7594--7599 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , Underfull \hbox (badness 5133) in paragraph at lines 7660--7664 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 10000) in paragraph at lines 8327--8329 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 2310) in paragraph at lines 9114--9119 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2253] [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] Underfull \hbox (badness 1248) in paragraph at lines 9691--9695 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2262] [2263] Underfull \hbox (badness 1789) in paragraph at lines 9769--9771 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2264] [2265] [2266] [2267] Underfull \hbox (badness 2600) in paragraph at lines 9993--9996 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] Underfull \hbox (badness 1097) in paragraph at lines 10630--10633 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2277] [2278] Underfull \hbox (badness 3000) in paragraph at lines 10766--10771 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] Underfull \hbox (badness 2134) in paragraph at lines 11361--11366 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2288] Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 1824) in paragraph at lines 11915--11919 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . Ac-cessed [2297] [2298] [2299] [2300] [2301] [2302] [2303] Underfull \hbox (badness 4060) in paragraph at lines 12361--12364 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/sl/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/sl/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able Overfull \hbox (18.77168pt too wide) in paragraph at lines 12384--12384 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2304] [2305] [2306] [2307] Underfull \hbox (badness 2150) in paragraph at lines 12639--12641 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / www . gnu . org / software / emac s / manual / [2308] [2309] [2310] [2311] Underfull \hbox (badness 10000) in paragraph at lines 12859--12863 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/sl/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12892--12898 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a [2312] Underfull \hbox (badness 2762) in paragraph at lines 12907--12913 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2313] [2314] Underfull \hbox (badness 1009) in paragraph at lines 13082--13094 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If Underfull \hbox (badness 4779) in paragraph at lines 13122--13124 []\T1/ptm/m/n/10 The file `\T1/zi4/m/sl/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/sl/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and [2315] Underfull \hbox (badness 1077) in paragraph at lines 13152--13159 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2316] [2317] [2318] [2319] [2320] [2321] Underfull \hbox (badness 3780) in paragraph at lines 13577--13583 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/sl/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via [2322] Underfull \hbox (badness 2635) in paragraph at lines 13595--13598 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/sl/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2323] [2324] [2325] Underfull \hbox (badness 2302) in paragraph at lines 13805--13807 []\T1/ptm/m/n/10 Convert file paths to the short form. This is an in-ter-face t o the Win-dows API call [2326] [2327] [2328] [2329] [2330] Underfull \hbox (badness 4441) in paragraph at lines 14104--14109 []\T1/ptm/m/n/10 logical; if []\T1/zi4/m/sl/10 TRUE []\T1/ptm/m/n/10 (de-fault) , [][][]\T1/zi4/m/sl/10 deparse[][][](control = \T1/ptm/m/sl/10 control\T1/zi4/ m/sl/10 ) []\T1/ptm/m/n/10 will not have Underfull \hbox (badness 5970) in paragraph at lines 14113--14116 []\T1/ptm/m/n/10 the page width to be used. The de-fault is the cur-rently ac-t ive [2331] [2332] [2333] [2334] [2335] [2336] [2337] Underfull \hbox (badness 2932) in paragraph at lines 14544--14551 []\T1/ptm/m/n/10 If []\T1/zi4/m/sl/10 syntax = NULL []\T1/ptm/m/n/10 (the de-fa ult) then the avail-able syn-tax ob-jects are con-sulted in turn, Underfull \hbox (badness 1688) in paragraph at lines 14544--14551 \T1/ptm/m/n/10 and se-lected if their []\T1/zi4/m/sl/10 extension []\T1/ptm/m/n /10 com-po-nent matches (as a reg-exp) the file name. 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(rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) pdfTeX warning (dest): name{Rfn.write.matrix} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.lmList} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.knitr} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.restore} has been referenced but does not ex ist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.setup} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.ncols} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.mathjaxr} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.dgTMatrix} has been referenced but does not exi st, replaced by a fixed one 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[1] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2285--2285 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2639--2639 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2957--2961 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3443--3446 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4239--4241 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5588--5590 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6871--6871 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7798--7803 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8531--8535 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8646--8649 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8963--8974 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1629) in paragraph at lines 9394--9406 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9394--9406 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25098--25104 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25098--25104 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25938--25941 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26145--26151 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26535--26538 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27163--27165 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27654--27662 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28084--28087 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28109--28111 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28250--28254 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28307--28312 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28619--28622 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28645--28647 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28691--28696 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28709--28712 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29124--29128 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29271--29274 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29352--29356 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29352--29356 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29357--29366 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30377--30380 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32188--32191 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32359--32370 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32907--32909 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34057--34059 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34060--34064 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34662--34664 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35869--35874 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36945--36949 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37036--37047 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38675--38677 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39093--39097 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39339--39343 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39344--39348 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39399--39406 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39634--39638 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41182--41190 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41192--41194 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41802--41808 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41820--41825 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41943--41948 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42490--42493 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42702. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43441--43445 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44635--44638 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45551--45559 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45551--45559 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 46992--46995 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47125--47129 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47251--47253 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47337--47342 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47585--47587 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 47987--47991 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48048--48052 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3775--3775 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} [914] [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4756--4761 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5255--5261 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5384--5387 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5445--5447 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6120 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1076] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10432--10435 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10510--10514 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] Underfull \hbox (badness 2503) in paragraph at lines 3571--3574 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1497] [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3684. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 3989) in paragraph at lines 4830--4837 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 2556) in paragraph at lines 5484--5487 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1527] [1528] [1529] [1530] [1531] [1532] [1533] Underfull \hbox (badness 2503) in paragraph at lines 5896--5900 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] Underfull \hbox (badness 7081) in paragraph at lines 6695--6698 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6699--6701 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1547] [1548] [1549] [1550] [1551] [1552] Underfull \vbox (badness 10000) has occurred while \output is active [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 10000) in paragraph at lines 7595--7598 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1561] [1562] [1563] [1564] [1565] [1566] Underfull \vbox (badness 3803) has occurred while \output is active [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1960) in paragraph at lines 8472--8475 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1576] [1577] [1578] [1579] [1580] [1581] [1582] Underfull \vbox (badness 3803) has occurred while \output is active [1583] [1584] [1585] [1586] [1587] [1588] Underfull \hbox (badness 2626) in paragraph at lines 9295--9298 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1589] Underfull \hbox (badness 2503) in paragraph at lines 9402--9406 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1590] [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] Underfull \hbox (badness 4518) in paragraph at lines 10750--10755 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 2142) in paragraph at lines 11112--11115 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11131--11134 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1616] Underfull \hbox (badness 1708) in paragraph at lines 11193--11197 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 1694) in paragraph at lines 11591--11594 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12089 \aliasA{hat}{influence.measures}{hat} [1631] [1632] Underfull \hbox (badness 1484) in paragraph at lines 12234--12236 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 10000) in paragraph at lines 12821--12823 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1643] [1644] [1645] [1646] [1647] [1648] Underfull \hbox (badness 2894) in paragraph at lines 13163--13167 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1649] [1650] [1651] [1652] [1653] [1654] Underfull \hbox (badness 1496) in paragraph at lines 13591--13597 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 4518) in paragraph at lines 13994--13999 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] Underfull \hbox (badness 1596) in paragraph at lines 14625--14628 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1671] Underfull \hbox (badness 4518) in paragraph at lines 14683--14688 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1672] [1673] [1674] Underfull \hbox (badness 6412) in paragraph at lines 14823--14827 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14830--14832 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \hbox (badness 2503) in paragraph at lines 15907--15911 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 10000) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] Underfull \hbox (badness 1158) in paragraph at lines 18078--18081 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1728] [1729] Underfull \vbox (badness 10000) has occurred while \output is active [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] Underfull \hbox (badness 1377) in paragraph at lines 19123--19128 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19128--19131 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19141--19145 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19141--19145 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19149--19153 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19374--19374 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19377--19377 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1749] [1750] [1751] [1752] [1753] [1754] [1755] Underfull \hbox (badness 1337) in paragraph at lines 19839--19842 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 10000) in paragraph at lines 20308--20314 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1765] [1766] [1767] [1768] [1769] [1770] [1771] Underfull \hbox (badness 1194) in paragraph at lines 20735--20738 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 2503) in paragraph at lines 21113--21116 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21140--21142 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1778] [1779] [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] Underfull \hbox (badness 10000) in paragraph at lines 22218--22224 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1796] [1797] [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] Underfull \hbox (badness 1337) in paragraph at lines 23694--23700 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1821] [1822] [1823] [1824] [1825] [1826] [1827] [1828] Underfull \hbox (badness 1436) in paragraph at lines 24186--24189 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24189--24192 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1829] [1830] Underfull \hbox (badness 10000) in paragraph at lines 24341--24342 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] Underfull \hbox (badness 1824) in paragraph at lines 25313--25319 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25313--25319 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25334--25337 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \hbox (badness 2165) in paragraph at lines 25909--25914 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1857] [1858] [1859] Underfull \hbox (badness 1867) in paragraph at lines 26119--26121 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26135--26139 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1860] [1861] [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] Underfull \vbox (badness 10000) has occurred while \output is active [1886] Underfull \hbox (badness 3514) in paragraph at lines 27787--27792 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1887] [1888] [1889] [1890] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28021--28021 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1891] Underfull \hbox (badness 3514) in paragraph at lines 28057--28063 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1892] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28117--28117 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1893] [1894] [1895] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28377--28382 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] Underfull \hbox (badness 3514) in paragraph at lines 28442--28447 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1899] [1900] Underfull \hbox (badness 3514) in paragraph at lines 28536--28541 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] Underfull \hbox (badness 6691) in paragraph at lines 28628--28633 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1902] [1903] [1904] [1905] [1906] [1907] [1908] [1909] Underfull \hbox (badness 4024) in paragraph at lines 29115--29118 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 5431) in paragraph at lines 29725--29727 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1920] [1921] [1922] [1923] Underfull \hbox (badness 5431) in paragraph at lines 29935--29938 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1924] [1925] [1926] [1927] [1928] Underfull \hbox (badness 1337) in paragraph at lines 30250--30254 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1929] [1930] [1931] Underfull \hbox (badness 1127) in paragraph at lines 30387--30390 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1932] [1933] [1934] Underfull \hbox (badness 1616) in paragraph at lines 30593--30596 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] Underfull \hbox (badness 3557) in paragraph at lines 31823--31827 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] [1959] [1960] Underfull \hbox (badness 1337) in paragraph at lines 32190--32194 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] Underfull \hbox (badness 1337) in paragraph at lines 32718--32722 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1970] [1971] [1972] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32926--32926 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1973] [1974] [1975] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33087--33087 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1976] [1977] [1978] [1979] [1980]) (./stats4-pkg.tex Chapter 11. [1981] [1982] [1983] Underfull \vbox (badness 10000) has occurred while \output is active [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] [1986] [1987] [1988] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1989] [1990] [1991]) (./tcltk-pkg.tex [1992] Chapter 12. [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \vbox (badness 10000) has occurred while \output is active [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2002] [2003] [2004] [2005] [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] [2012] [2013] [2014]) (./tools-pkg.tex Chapter 13. [2015] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2016] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2017] [2018] [2019] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2020] [2021] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2022] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2023] [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2036] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2037] [2038] [2039] [2040] [2041] [2042] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2043] [2044] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2045] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2046] [2047] [2048] [2049] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2050] [2051] [2052] [2053] [2054] [2055] [2056] [2057] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2058] [2059] [2060] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2077] [2078] [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2089] [2090] [2091] [2092] [2093] [2094] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4913--4913 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2095] [2096] [2097] Underfull \hbox (badness 1796) in paragraph at lines 5122--5127 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2098] Underfull \hbox (badness 1838) in paragraph at lines 5208--5214 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 5208--5214 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [2099] [2100] [2101] [2102] [2103] [2104] Underfull \hbox (badness 2197) in paragraph at lines 5560--5570 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [2105] Underfull \hbox (badness 1571) in paragraph at lines 5626--5630 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [2106] [2107] [2108] [2109]) (./utils-pkg.tex [2110] Chapter 14. [2111] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2112] [2113] [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2122] [2123] [2124] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2125] [2126] [2127] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2128] [2129] [2130] Underfull \vbox (badness 3803) has occurred while \output is active [2131] [2132] [2133] [2134] [2135] [2136] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2137] [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2148] [2149] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2150] [2151] [2152] [2153] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2175] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2176] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2177] [2178] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2200] [2201] [2202] [2203] [2204] [2205] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2214] [2215] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2216] [2217] [2218] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2219] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2220] [2221] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2222] [2223] Underfull \hbox (badness 1325) in paragraph at lines 7250--7254 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2224] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2225] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2226] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2227] Underfull \hbox (badness 1024) in paragraph at lines 7561--7564 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2228] Underfull \hbox (badness 10000) in paragraph at lines 7594--7599 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , Underfull \hbox (badness 5133) in paragraph at lines 7660--7664 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 10000) in paragraph at lines 8327--8329 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 2310) in paragraph at lines 9114--9119 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2253] [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] Underfull \hbox (badness 1248) in paragraph at lines 9691--9695 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2262] [2263] Underfull \hbox (badness 1789) in paragraph at lines 9769--9771 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2264] [2265] [2266] [2267] Underfull \hbox (badness 2600) in paragraph at lines 9993--9996 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] Underfull \hbox (badness 1097) in paragraph at lines 10630--10633 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2277] [2278] Underfull \hbox (badness 3000) in paragraph at lines 10766--10771 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] Underfull \hbox (badness 2134) in paragraph at lines 11361--11366 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2288] Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 1824) in paragraph at lines 11915--11919 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . 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(rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) pdfTeX warning (dest): name{Rfn.write.matrix} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.lmList} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.knitr} has been referenced but does not exist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.restore} has been referenced but does not ex ist, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.setup} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.de.ncols} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.mathjaxr} has been referenced but does not exis t, replaced by a fixed one pdfTeX warning (dest): name{Rfn.dgTMatrix} has been referenced but does not exi st, replaced by a fixed one 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[1] [2] Underfull \hbox (badness 6252) in paragraph at lines 149--157 []\T1/ptm/m/n/10 a small pos-i-tive floating-point num-ber []\T1/zi4/m/n/10 x [ ]\T1/ptm/m/n/10 such that []\T1/zi4/m/n/10 1 - x != 1[]\T1/ptm/m/n/10 . It Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/ptm/m/n/10 equals []\T1/zi4/m/n/10 double.base ^ double.neg.ulp.digits []\T 1/ptm/m/n/10 if []\T1/zi4/m/n/10 double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 []\T1/ptm/m/n/10 is 2 or []\T1/zi4/m/n/10 double.rounding []\T1/ptm/m/n/10 is 0 ; oth-er-wise, it is []\T1/zi4/m/n/10 (double.base Underfull \hbox (badness 10000) in paragraph at lines 149--157 \T1/zi4/m/n/10 ^ double.neg.ulp.digits) / 2[]\T1/ptm/m/n/10 . Nor-mally []\T1/z i4/m/n/10 1.110223e-16[]\T1/ptm/m/n/10 . As Underfull \hbox (badness 4995) in paragraph at lines 149--157 []\T1/zi4/m/n/10 double.neg.ulp.digits []\T1/ptm/m/n/10 is bounded be-low by [] \T1/zi4/m/n/10 -(double.digits + 3)[]\T1/ptm/m/n/10 , [3] [4] [5] Underfull \hbox (badness 1178) in paragraph at lines 337--340 []\T1/ptm/m/n/10 character string, the pre-ferred set-ting for [][][]\T1/zi4/m/ n/10 options[][][]("pkgType")[]\T1/ptm/m/n/10 . Val-ues [6] [7] [8] [9] Underfull \hbox (badness 2556) in paragraph at lines 572--578 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/n/10 insertions[]\T1/ptm/m/n/10 ', [10] [11] [12] (/usr/share/texlive/texmf-dist/tex/latex/inconsolata/ts1zi4.fd) [13{/usr/share/texlive/texmf-dist/fonts/enc/dvips/inconsolata/i4-ts1.enc}] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] Underfull \vbox (badness 3803) has occurred while \output is active [31] [32] [33] [34] [35] [36] Overfull \hbox (26.27782pt too wide) in paragraph at lines 2285--2285 []\T1/zi4/m/n/9 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represen t-date-and-times-in-MATLAB.html)[] [37] [38] [39] [40] [41] [42] Overfull \hbox (20.69484pt too wide) in paragraph at lines 2639--2639 []\T1/zi4/m/n/9 if(file.exists(tab)) { # typically on Windows; on Linux when \TS1/cmtt/m/n/9 `\T1/zi4/m/n/9 configure --with-internal-tzcode\TS1/cmtt/m/n/9 `[] [43] [44] [45] [46] [47] Underfull \hbox (badness 1721) in paragraph at lines 2957--2961 [][][]\T1/zi4/m/n/10 assign[][][] []\T1/ptm/m/n/10 (and its in-verse [][][]\T1/ zi4/m/n/10 get[][][][]\T1/ptm/m/n/10 ), for ``sub-assign-ment'' such as []\T1/z i4/m/n/10 x[i] <- v[]\T1/ptm/m/n/10 , see [][][]\T1/zi4/m/n/10 [<-[][][][]\T1/p tm/m/n/10 ; fur-ther, [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 2538) in paragraph at lines 3443--3446 []\T1/zi4/m/n/10 unCfillPOSIXlt(x) []\T1/ptm/m/n/10 is a fast [][]prim-i-tive[] [][] ver-sion of []\T1/zi4/m/n/10 balancePOSIXlt(x, fill.only=TRUE, [55] [56] [57] [58] [59] Underfull \vbox (badness 3803) has occurred while \output is active [60] [61] [62] [63] [64] [65] [66] [67] Underfull \hbox (badness 10000) in paragraph at lines 4239--4241 []\T1/ptm/m/n/10 The num-ber of lines printed for the de-parsed call can be lim -ited by set-ting [68] [69] [70] [71] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Underfull \hbox (badness 2521) in paragraph at lines 5588--5590 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to c har-ac-ter by [89] [90] [91] [92] [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] [108] Overfull \hbox (5.27168pt too wide) in paragraph at lines 6871--6871 []\T1/zi4/m/n/9 stopifnot(is.na(NpNA), is.na(NA_complex_), is.na(Re(NA_complex _)), is.na(Im(NA_complex_)))[] [109] [110] [111] [112] [113] [114] [115] [116] Underfull \hbox (badness 2253) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 file[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 pipe[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 fifo[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 url[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 gzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 bzfile[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 xzfile[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 zstdfile[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 unz[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 socketConn ection[]\T1/ptm/m/n/10 , Underfull \hbox (badness 2846) in paragraph at lines 7482--7487 []\T1/zi4/m/n/10 socketAccept []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 serverSocke t []\T1/ptm/m/n/10 re-turn a con-nec-tion ob-ject which in-her-its from class [117] [118] [119] [120] [121] Underfull \hbox (badness 2261) in paragraph at lines 7798--7803 \T1/zi4/m/n/10 / / github . com / astrand / xclip$[][]\T1/ptm/m/n/10 ) or []\T1 /zi4/m/n/10 xsel []\T1/ptm/m/n/10 ([][]$\T1/zi4/m/n/10 https : / / www . vergen et . net / ~conrad / software / [122] [123] Underfull \vbox (badness 10000) has occurred while \output is active [124] [125] [126] [127] [128] [129] [130] [131] [132] Underfull \hbox (badness 2096) in paragraph at lines 8531--8535 \T1/zi4/m/n/10 status _ codes$[][] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / List _ of _ FTP _ server _ return _ codes$ [][]\T1/ptm/m/n/10 . [133] [134] Underfull \hbox (badness 2351) in paragraph at lines 8646--8649 [][][]\T1/zi4/m/n/10 split[][][] []\T1/ptm/m/n/10 for split-ting a vari-able ac -cord-ing to a group fac-tor; [][][]\T1/zi4/m/n/10 factor[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 tabulate[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 t able[][][][]\T1/ptm/m/n/10 , [135] [136] [137] [138] [139] Underfull \hbox (badness 4479) in paragraph at lines 8963--8974 [][][]\T1/zi4/m/n/10 I[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 plot.data.f rame[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 print.data.frame[][][][]\T1/p tm/m/n/10 , [][][]\T1/zi4/m/n/10 row.names[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 names[][][] []\T1/ptm/m/n/10 (for the col-umn names), [140] [141] [142] [143] [144] [145] Underfull \hbox (badness 1629) in paragraph at lines 9394--9406 []\T1/ptm/m/n/10 A few times have spe-cific is-sues. First, the leap sec-onds a re ig-nored, and real times Underfull \hbox (badness 2875) in paragraph at lines 9394--9406 []\T1/zi4/m/n/10 NA[]\T1/ptm/m/n/10 , and hence []\T1/zi4/m/n/10 as.POSIXct("19 69-12-31 23:59:59", tz = "UTC") []\T1/ptm/m/n/10 will give []\T1/zi4/m/n/10 "19 69-12-31 [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] Underfull \hbox (badness 1178) in paragraph at lines 10265--10269 []\T1/ptm/m/n/10 If true, [][][]\T1/zi4/m/n/10 list[][][][]\T1/ptm/m/n/10 s and atomic vec-tors with non-[][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 names (see [][][]\T1/zi4/m/n/10 names[][][][]\T1/ptm/m/n/10 ) are de- [159] [160] [161] [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] [173] [174] [175] [176] [177] [178] [179] [180] [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Underfull \hbox (badness 2744) in paragraph at lines 12613--12615 []\T1/ptm/m/n/10 Changing the cur-rent en-cod-ing from a run-ning R ses-sion ma y lead to con-fu-sion (see [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] Underfull \hbox (badness 2253) in paragraph at lines 14821--14823 []\T1/ptm/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion is done: see [228] Underfull \hbox (badness 1490) in paragraph at lines 14856--14859 []\T1/ptm/m/n/10 Junction points and sym-bolic links are fol-lowed, so in-for-m a-tion is given about the [229] Underfull \hbox (badness 1565) in paragraph at lines 14942--14946 [][][]\T1/zi4/m/n/10 Sys.readlink[][][] []\T1/ptm/m/n/10 to find out about sym- bolic links, [][][]\T1/zi4/m/n/10 files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 file.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 list.files[][][] []\T1/ptm/m/n/10 , and [230] Underfull \hbox (badness 4927) in paragraph at lines 14993--14995 []\T1/ptm/m/n/10 It can also be used for en-vi-ron-ment paths such as []\T1/zi4 /m/n/10 PATH []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 R_LIBS []\T1/ptm/m/n/10 with []\T1/zi4/m/n/10 fsep = [231] [232] Underfull \hbox (badness 1466) in paragraph at lines 15144--15147 []\T1/ptm/m/n/10 character vec-tors, con-tain-ing file names or paths. For []\T 1/zi4/m/n/10 file.copy []\T1/ptm/m/n/10 and [233] [234] Underfull \hbox (badness 10000) in paragraph at lines 15275--15279 [][][]\T1/zi4/m/n/10 file.info[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 fil e.access[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 file.path[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/n/10 file.show[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m /n/10 list.files[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 unlink[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/n/10 basename[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 15286--15289 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Hard _ link$[][ ] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wik i / [235] [236] [237] [238] [239] Underfull \hbox (badness 3965) in paragraph at lines 15590--15594 []\T1/ptm/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-tr i-bu-tion func-tion, and in-deed, [240] [241] [242] [243] [244] [245] [246] [247] Underfull \hbox (badness 5260) in paragraph at lines 16099--16099 []\T1/zi4/m/n/10 big.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 big.interval[]\T1/ ptm/m/n/10 , []\T1/zi4/m/n/10 small.mark[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 sma ll.interval[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 decimal.mark[]\T1/ptm/m/n/10 , [248] [249] [250] [251] Underfull \hbox (badness 4429) in paragraph at lines 16389--16392 []\T1/ptm/m/n/10 an atomic nu-mer-i-cal or char-ac-ter ob-ject, pos-si-bly [][] []\T1/zi4/m/n/10 complex[][][] []\T1/ptm/m/n/10 only for [252] [253] Underfull \hbox (badness 10000) in paragraph at lines 16496--16498 []\T1/ptm/m/n/10 This works via []\T1/zi4/m/n/10 prettyNum()[]\T1/ptm/m/n/10 , which calls []\T1/zi4/m/n/10 .format.zeros(*, [254] Underfull \hbox (badness 2035) in paragraph at lines 16569--16573 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/n/10 decimal.mark []\T1/ptm/m/n/1 0 in []\T1/zi4/m/n/10 formatC() []\T1/ptm/m/n/10 was changed in \T1/phv/m/n/10 R \T1/ptm/m/n/10 3.2.0: for use within [255] Underfull \vbox (badness 10000) has occurred while \output is active [256] [257] [258] [259] [260] [261] [262] [263] [264] Underfull \hbox (badness 2452) in paragraph at lines 17192--17196 []\T1/zi4/m/n/10 gctorture2 []\T1/ptm/m/n/10 can also be in-voked via en-vi-ron -ment vari-ables at the start of the \T1/phv/m/n/10 R \T1/ptm/m/n/10 ses- Underfull \hbox (badness 1147) in paragraph at lines 17192--17196 \T1/ptm/m/n/10 sion. []\T1/zi4/m/n/10 R_GCTORTURE []\T1/ptm/m/n/10 cor-re-spond s to the []\T1/zi4/m/n/10 step []\T1/ptm/m/n/10 ar-gu-ment, []\T1/zi4/m/n/10 R_ GCTORTURE_WAIT []\T1/ptm/m/n/10 to []\T1/zi4/m/n/10 wait[]\T1/ptm/m/n/10 , and [265] [266] [267] Underfull \hbox (badness 1092) in paragraph at lines 17384--17389 [][][]\T1/zi4/m/n/10 library.dynam[][][][]\T1/ptm/m/n/10 , or can be found af-t er the DLL has been loaded us-ing [268] [269] [270] [271] Underfull \hbox (badness 6741) in paragraph at lines 17637--17641 \T1/ptm/m/n/10 Additionally, the list will have an ad-di-tional class, be-ing [ ]\T1/zi4/m/n/10 CRoutine[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 CallRoutine[]\T1/pt m/m/n/10 , [272] [273] [274] [275] [276] [277] [278] [279] [280] [281] [282] [283] Underfull \vbox (badness 10000) has occurred while \output is active [284] [285] [286] [287] [288] [289] [290] [291] [292] [293] Underfull \hbox (badness 1769) in paragraph at lines 19142--19145 []\T1/ptm/m/n/10 a char-ac-ter vec-tor, or an ob-ject to be con-verted to a cha r-ac-ter vec-tor [294] [295] [296] [297] [298] Underfull \hbox (badness 10000) in paragraph at lines 19451--19453 []\T1/ptm/m/n/10 the `root' col-la-tion: see [][]$\T1/zi4/m/n/10 https : / / ww w . unicode . org / reports / tr35 / Underfull \hbox (badness 2088) in paragraph at lines 19457--19466 []\T1/ptm/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see [][]$\T 1/zi4/m/n/10 https : / / unicode-[]org . github . io / icu / [299] [300] [301] [302] [303] [304] [305] [306] [307] [308] Underfull \hbox (badness 1442) in paragraph at lines 20065--20067 []\T1/ptm/m/n/10 the choice of de-fault graph-ics de-vice launched when needed and by [][][]\T1/zi4/m/n/10 dev.new[][][][]\T1/ptm/m/n/10 : see [309] Underfull \hbox (badness 2452) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.character[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.complex[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.double[][][][]\T1/pt m/m/n/10 , [][][]\T1/zi4/m/n/10 as.integer[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi 4/m/n/10 as.logical[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.raw[][][][] \T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.vector[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 5726) in paragraph at lines 20161--20187 [][][]\T1/zi4/m/n/10 as.call[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 as.en vironment[][][] [][]is.array[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.ma trix[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.na[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 anyNA[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.nan [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/n/10 is.finite[][][] [310] [311] [312] [313] [314] [315] Underfull \hbox (badness 1248) in paragraph at lines 20559--20562 []\T1/zi4/m/n/10 is.atomic []\T1/ptm/m/n/10 is true for the [][]atomic[][][] ty pes ([]\T1/zi4/m/n/10 "logical"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "integer"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "numeric"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 " complex"[]\T1/ptm/m/n/10 , [316] [317] [318] [319] [320] Underfull \hbox (badness 4739) in paragraph at lines 20828--20830 []\T1/ptm/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-ere d, see [321] [322] [323] [324] [325] Underfull \vbox (badness 3803) has occurred while \output is active [326] [327] [328] [329] [330] [331] [332] [333] [334] [335] [336] [337] [338] [339] Underfull \hbox (badness 2469) in paragraph at lines 22003--22008 []\T1/ptm/m/n/10 In late 2017 a []\T1/zi4/m/n/10 libcurl []\T1/ptm/m/n/10 in-st al-la-tion was seen di-vided into two li-braries, []\T1/zi4/m/n/10 libcurl []\T 1/ptm/m/n/10 and [340] [341] Underfull \hbox (badness 1675) in paragraph at lines 22090--22099 []\T1/ptm/m/n/10 At startup, the li-brary search path is ini-tial-ized from the en-vi-ron-ment vari-ables []\T1/zi4/m/n/10 R_LIBS[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3189) in paragraph at lines 22100--22113 []\T1/ptm/m/n/10 First, []\T1/zi4/m/n/10 .Library.site []\T1/ptm/m/n/10 is ini- tial-ized from []\T1/zi4/m/n/10 R_LIBS_SITE[]\T1/ptm/m/n/10 . If this is un-set or empty, the Underfull \hbox (badness 10000) in paragraph at lines 22148--22151 []\T1/zi4/m/n/10 LOCALAPPDATA []\T1/ptm/m/n/10 (usu-ally []\T1/zi4/m/n/10 C:\Us ers\username\AppData\Local[]\T1/ptm/m/n/10 ) on Win-dows is a hid- Underfull \hbox (badness 4752) in paragraph at lines 22148--22151 \T1/ptm/m/n/10 den di-rec-tory and may not be viewed by some soft-ware. It may be opened by [342] [343] Underfull \hbox (badness 1014) in paragraph at lines 22282--22287 []\T1/ptm/m/n/10 Normally []\T1/zi4/m/n/10 library []\T1/ptm/m/n/10 re-turns (i n-vis-i-bly) the list of at-tached pack-ages, but []\T1/zi4/m/n/10 TRUE []\T1/p tm/m/n/10 or []\T1/zi4/m/n/10 FALSE []\T1/ptm/m/n/10 if [344] [345] [346] [347] [348] [349] [350] [351] [352] [353] [354] [355] [356] Underfull \hbox (badness 1264) in paragraph at lines 23129--23137 []\T1/ptm/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup-ported: [357] Underfull \hbox (badness 4441) in paragraph at lines 23164--23167 []\T1/ptm/m/n/10 Note that set-ting cat-e-gory []\T1/zi4/m/n/10 "LC_ALL" []\T1/ ptm/m/n/10 sets only cat-e-gories []\T1/zi4/m/n/10 "LC_COLLATE"[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 "LC_CTYPE"[]\T1/ptm/m/n/10 , [358] [359] [360] [361] [362] [363] [364] [365] [366] [367] [368] [369] Underfull \hbox (badness 5231) in paragraph at lines 23984--23986 []\T1/ptm/m/n/10 The al-go-rithm used by []\T1/zi4/m/n/10 make.unique []\T1/ptm /m/n/10 has the prop-erty that []\T1/zi4/m/n/10 make.unique(c(A, B)) == [370] [371] [372] [373] [374] [375] [376] [377] [378] [379] [380] [381] [382] [383] [384] [385] [386] [387] Underfull \hbox (badness 6380) in paragraph at lines 25098--25104 [][][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Data _ compress ion$[][] \T1/ptm/m/n/10 for back-ground on data com-pres- Underfull \hbox (badness 1472) in paragraph at lines 25098--25104 [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / Bzip2$[][]\T1/ptm /m/n/10 , and [][]$\T1/zi4/m/n/10 https : / / en . wikipedia . org / wiki / XZ _ Utils$[][] [388] [389] [390] [391] [392] [393] [394] [395] Underfull \hbox (badness 2790) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 packageStartupMessage []\T1/ptm/m/n/10 is a vari-ant whose mes -sages can be sup-pressed sep-a-rately by Underfull \hbox (badness 1571) in paragraph at lines 25610--25613 []\T1/zi4/m/n/10 suppressPackageStartupMessages[]\T1/ptm/m/n/10 . (They are sti ll mes-sages, so can be sup-pressed by [396] [397] [398] [399] [400] Underfull \hbox (badness 1194) in paragraph at lines 25938--25941 []\T1/ptm/m/n/10 The de-fault method for []\T1/zi4/m/n/10 anyNA []\T1/ptm/m/n/1 0 han-dles atomic vec-tors with-out a class and []\T1/zi4/m/n/10 NULL[]\T1/ptm/ m/n/10 . It calls [401] [402] [403] Underfull \hbox (badness 2368) in paragraph at lines 26145--26151 []\T1/ptm/m/n/10 For an [][][]\T1/zi4/m/n/10 environment[][][] env[]\T1/ptm/m/n /10 , []\T1/zi4/m/n/10 names(env) []\T1/ptm/m/n/10 gives the names of the cor-r e-spond-ing list, i.e., [404] [405] [406] [407] [408] [409] Underfull \hbox (badness 10000) in paragraph at lines 26535--26538 []\T1/ptm/m/n/10 optional [][][]\T1/zi4/m/n/10 logical[][][] []\T1/ptm/m/n/10 e ven-tu-ally to be passed to []\T1/zi4/m/n/10 print()[]\T1/ptm/m/n/10 , used by [410] [411] [412] [413] [414] [415] [416] [417] [418] [419] Underfull \hbox (badness 10000) in paragraph at lines 27163--27165 []\T1/zi4/m/n/10 isNamespaceLoaded(pkg) []\T1/ptm/m/n/10 is equiv-a-lent to but more ef-fi-cient than []\T1/zi4/m/n/10 pkg %in% [420] [421] [422] [423] [424] [425] [426] Underfull \hbox (badness 2443) in paragraph at lines 27654--27662 \T1/ptm/m/n/10 suit-able char-ac-ter vec-tors as above, or nu-meric ver-sion ob -jects. For [427] [428] [429] [430] [431] [432] [433] Underfull \hbox (badness 1881) in paragraph at lines 28084--28087 []\T1/ptm/m/n/10 integer value con-trol-ling the print-ing of lan-guage con-str ucts which are Underfull \hbox (badness 6220) in paragraph at lines 28109--28111 []\T1/ptm/m/n/10 Extra command-line ar-gu-ment(s) for non-default meth-ods: see [434] [435] Underfull \hbox (badness 2142) in paragraph at lines 28250--28254 []\T1/ptm/m/n/10 the de-fault pa-per for-mat used by [][][]\T1/zi4/m/n/10 posts cript[][][][]\T1/ptm/m/n/10 ; set by en-vi-ron-ment vari-able Underfull \hbox (badness 1968) in paragraph at lines 28307--28312 []\T1/ptm/m/n/10 the com-mand used by [][][]\T1/zi4/m/n/10 postscript[][][] []\ T1/ptm/m/n/10 for print-ing; set by en-vi-ron-ment vari-able [436] [437] [438] [439] Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 []\T1/ptm/m/n/10 The URL of a Bio-con-duc-tor mir-ror for use by [][][]\T1/zi4/ m/n/10 setRepositories[][][][]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 e.g. the de-fault `[]\T1/zi4/m/n/10 "https://bioconductor.org"[] \T1/ptm/m/n/10 ' or the Eu-ro-pean mir-ror Underfull \hbox (badness 10000) in paragraph at lines 28606--28612 \T1/ptm/m/n/10 `[]\T1/zi4/m/n/10 "https://bioconductor.statistik.tu-dortmund.de "[]\T1/ptm/m/n/10 '. Can be set by Underfull \hbox (badness 5878) in paragraph at lines 28619--28622 []\T1/ptm/m/n/10 default Cc: ad-dress used by [][][]\T1/zi4/m/n/10 create.post[ ][][] []\T1/ptm/m/n/10 (and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T1/p tm/m/n/10 and Underfull \hbox (badness 2689) in paragraph at lines 28645--28647 []\T1/ptm/m/n/10 optional in-te-ger vec-tor for set-ting ports of the in-ter-na l HTTP server, see [440] Underfull \hbox (badness 10000) in paragraph at lines 28691--28696 []\T1/ptm/m/n/10 Used by [][][]\T1/zi4/m/n/10 install.packages[][][] []\T1/ptm/ m/n/10 (and in-di-rectly Underfull \hbox (badness 2529) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 in-di-rectly [][][]\T1/zi4/m/n/10 update.packages[][][][]\T1/ptm /m/n/10 ) on plat-forms which sup-port bi-nary pack-ages. Pos-si- Underfull \hbox (badness 2512) in paragraph at lines 28697--28708 \T1/ptm/m/n/10 ble val-ues are []\T1/zi4/m/n/10 "never"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/n/10 "interactive" []\T1/ptm/m/n/10 (which means ask in in-ter-ac-tive u se and Underfull \hbox (badness 7203) in paragraph at lines 28709--28712 []\T1/ptm/m/n/10 default email-ing method used by [][][]\T1/zi4/m/n/10 create.p ost[][][] []\T1/ptm/m/n/10 and hence [][][]\T1/zi4/m/n/10 bug.report[][][] []\T 1/ptm/m/n/10 and [441] [442] [443] [444] [445] Underfull \vbox (badness 3803) has occurred while \output is active [446] Underfull \hbox (badness 10000) in paragraph at lines 29124--29128 \T1/ptm/m/n/10 el-e-ment []\T1/zi4/m/n/10 A[c(arrayindex.x, arrayindex.y)] = FU N(X[arrayindex.x], Y[arrayindex.y], [447] [448] Underfull \hbox (badness 10000) in paragraph at lines 29271--29274 []\T1/zi4/m/n/10 str2expression(s) []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 str2la ng(s) []\T1/ptm/m/n/10 re-turn spe-cial ver-sions of []\T1/zi4/m/n/10 parse(tex t=s, [449] Underfull \hbox (badness 7925) in paragraph at lines 29352--29356 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 ve c-tor []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2expression(s) [ ]\T1/ptm/m/n/10 cor-re-sponds to Underfull \hbox (badness 1253) in paragraph at lines 29352--29356 []\T1/zi4/m/n/10 parse(text = s, keep.source=FALSE)[]\T1/ptm/m/n/10 , which is al-ways of type ([][][]\T1/zi4/m/n/10 typeof[][][][]\T1/ptm/m/n/10 ) and [][][] \T1/zi4/m/n/10 class[][][] Underfull \hbox (badness 2521) in paragraph at lines 29357--29366 []\T1/ptm/m/n/10 for a [][][]\T1/zi4/m/n/10 character[][][] []\T1/ptm/m/n/10 st ring []\T1/zi4/m/n/10 s[]\T1/ptm/m/n/10 , []\T1/zi4/m/n/10 str2lang(s) []\T1/pt m/m/n/10 cor-re-sponds to []\T1/zi4/m/n/10 parse(text = s, [450] [451] [452] [453] [454] [455] [456] [457] [458] [459] [460] [461] [462] [463] [464] [465] [466] Underfull \hbox (badness 2726) in paragraph at lines 30377--30380 []\T1/ptm/m/n/10 character string (or []\T1/zi4/m/n/10 NULL[]\T1/ptm/m/n/10 ) i n-di-cat-ing [][][]\T1/zi4/m/n/10 NA[][][] []\T1/ptm/m/n/10 val-ues in printed out-put, see [467] [468] [469] [470] [471] [472] [473] [474] [475] [476] [477] [478] [479] [480] [481] [482] [483] [484] [485] Underfull \vbox (badness 3803) has occurred while \output is active [486] [487] [488] [489] [490] [491] [492] Underfull \hbox (badness 1248) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 uni-form pseudo-random num-ber gen-er-a-tor, \T1/ptm/m/it/10 ACM Trans-ac-tions on Mod-el-ing and Com-puter Underfull \hbox (badness 10000) in paragraph at lines 32070--32077 \T1/ptm/m/n/10 Now see [][]$\T1/zi4/m/n/10 https : / / www . math . sci . hiros hima-[]u . ac . jp / ~m-[]mat / MT / VERSIONS / C-[]LANG / [493] [494] Underfull \hbox (badness 1533) in paragraph at lines 32188--32191 []\T1/ptm/m/n/10 As with all com-piled code, mis-specifying these func-tions ca n crash \T1/phv/m/n/10 R\T1/ptm/m/n/10 . Do in-clude the [495] [496] [497] Underfull \hbox (badness 1163) in paragraph at lines 32359--32370 []\T1/ptm/m/n/10 If all com-po-nents are dif-fer-ent (and no []\T1/zi4/m/n/10 N A[]\T1/ptm/m/n/10 s), the ranks are well de-fined, with val-ues in [498] [499] [500] [501] [502] [503] [504] [505] [506] Underfull \hbox (badness 6300) in paragraph at lines 32907--32909 []\T1/ptm/m/n/10 The sec-tion `Pro-cess-ing doc-u-men-ta-tion files' in the `Wr it-ing R Ex-ten-sions' man-ual: [507] [508] [509] [510] [511] [512] [513] [514] [515] [516] [517] [518] [519] [520] [521] [522] [523] Underfull \hbox (badness 10000) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 regexpr []\T1/ptm/m/n/10 and []\T1/zi4/m/n/10 gregexpr []\T1/p tm/m/n/10 sup-port `named cap-ture'. If groups are named, e.g., Underfull \hbox (badness 1221) in paragraph at lines 34036--34040 []\T1/zi4/m/n/10 "(?[A-Z][a-z]+)" []\T1/ptm/m/n/10 then the po-si-tions of the matches are also re-turned by name. Underfull \hbox (badness 3557) in paragraph at lines 34057--34059 []\T1/ptm/m/n/10 The POSIX 1003.2 stan-dard at [][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919799 / Underfull \hbox (badness 1122) in paragraph at lines 34060--34064 []\T1/ptm/m/n/10 The []\T1/zi4/m/n/10 pcre2pattern []\T1/ptm/m/n/10 or []\T1/zi 4/m/n/10 pcrepattern man []\T1/ptm/m/n/10 page (found as part of [][]$\T1/zi4/m /n/10 https : / / www . pcre . org / [524] [525] Underfull \vbox (badness 10000) has occurred while \output is active [526] [527] [528] [529] [530] [531] [532] [533] Underfull \hbox (badness 1655) in paragraph at lines 34662--34664 []\T1/ptm/m/n/10 a vec-tor (atomic, not a list) for []\T1/zi4/m/n/10 rle()[]\T1 /ptm/m/n/10 ; an ob-ject of class []\T1/zi4/m/n/10 "rle" []\T1/ptm/m/n/10 for [534] [535] [536] [537] [538] [539] [540] [541] [542] [543] [544] [545] [546] [547] [548] [549] [550] [551] [552] Underfull \hbox (badness 2261) in paragraph at lines 35869--35874 []\T1/ptm/m/n/10 If []\T1/zi4/m/n/10 strip.white []\T1/ptm/m/n/10 is of length 1, it ap-plies to all fields; oth-er-wise, if [553] [554] [555] [556] [557] [558] [559] [560] [561] [562] [563] [564] [565] [566] [567] [568] [569] Underfull \hbox (badness 3668) in paragraph at lines 36945--36949 []\T1/zi4/m/n/10 getAllConnections []\T1/ptm/m/n/10 re-turns a se-quence of in- te-ger con-nec-tion de-scrip-tors for use with [570] Underfull \hbox (badness 10000) in paragraph at lines 37036--37047 \T1/zi4/m/n/10 / / learn . microsoft . com / en-[]us / cpp / c-[]language / par sing-[]c-[]command-[]line-[]arguments ? [571] [572] [573] [574] [575] [576] [577] [578] [579] [580] [581] [582] [583] [584] [585] [586] [587] [588] [589] [590] Underfull \vbox (badness 3803) has occurred while \output is active [591] [592] [593] [594] [595] [596] Underfull \hbox (badness 10000) in paragraph at lines 38675--38677 [][][]$\T1/zi4/m/n/10 https : / / pubs . opengroup . org / onlinepubs / 9699919 799 / functions / snprintf . html$[][] \T1/ptm/m/n/10 for [597] [598] [599] [600] [601] [602] Underfull \hbox (badness 2913) in paragraph at lines 39093--39097 \T1/ptm/m/n/10 ber of nested \T1/phv/m/n/10 R \T1/ptm/m/n/10 ex-pres-sions cur- rently un-der eval-u-a-tion, ex-ceeds the limit set by [603] [604] [605] [606] Underfull \hbox (badness 1072) in paragraph at lines 39339--39343 []\T1/ptm/m/n/10 On front-ends which sup-port it, the com-mands his-tory is rea d from the file spec-i-fied by Underfull \hbox (badness 10000) in paragraph at lines 39344--39348 []\T1/ptm/m/n/10 The command-line op-tion `[]\T1/zi4/m/n/10 --vanilla[]\T1/ptm/ m/n/10 ' im-plies `[]\T1/zi4/m/n/10 --no-site-file[]\T1/ptm/m/n/10 ', `[]\T1/zi 4/m/n/10 --no-init-file[]\T1/ptm/m/n/10 ', Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 []\T1/ptm/m/n/10 On sys-tems with sub-architectures (mainly Win-dows), the file s `\T1/zi4/m/n/10 Renviron.site\T1/ptm/m/n/10 ' Underfull \hbox (badness 10000) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 and `\T1/zi4/m/n/10 Rprofile.site\T1/ptm/m/n/10 ' are looked for first in architecture-specific di-rec-to-ries, Underfull \hbox (badness 1320) in paragraph at lines 39384--39390 \T1/ptm/m/n/10 e.g. `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/i386/R environ.site\T1/ptm/m/n/10 '. And e.g. `\T1/zi4/m/n/10 .Renviron.i386\T1/ptm/m/ n/10 ' will be used in [607] Underfull \hbox (badness 3009) in paragraph at lines 39399--39406 []\T1/ptm/m/n/10 On Unix ver-sions of \T1/phv/m/n/10 R \T1/ptm/m/n/10 there is also a file `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/n/10 /etc/Renviron\T1/pt m/m/n/10 ' which is read Underfull \hbox (badness 1038) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 very early in the start-up pro-cess-ing. It con-tains en-vi-ron- ment vari-ables set by \T1/phv/m/n/10 R \T1/ptm/m/n/10 in the Underfull \hbox (badness 2573) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 con-fig-ure pro-cess. Val-ues in that file can be over-rid-den i n site or user en-vi-ron-ment Underfull \hbox (badness 1917) in paragraph at lines 39399--39406 \T1/ptm/m/n/10 files: do not change `[][]\T1/ptm/m/sl/10 R_HOME[][][]\T1/zi4/m/ n/10 /etc/Renviron\T1/ptm/m/n/10 ' it-self. Note that this is dis-tinct from [608] [609] [610] Underfull \hbox (badness 2644) in paragraph at lines 39634--39638 []\T1/ptm/m/n/10 alternative to []\T1/zi4/m/n/10 exprs []\T1/ptm/m/n/10 or []\T 1/zi4/m/n/10 ...[]\T1/ptm/m/n/10 : an `expression-like' ob-ject, typ-i-cally an [611] [612] [613] [614] [615] [616] [617] [618] [619] Underfull \vbox (badness 10000) has occurred while \output is active [620] [621] [622] [623] [624] [625] [626] [627] [628] [629] [630] [631] [632] [633] [634] [635] Underfull \hbox (badness 4144) in paragraph at lines 41182--41190 []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary.default[]\T1/ptm/m/n/10 ) or [][ ][]\T1/zi4/m/n/10 format[][][]() []\T1/ptm/m/n/10 (for []\T1/zi4/m/n/10 summary .data.frame[]\T1/ptm/m/n/10 ). In Underfull \hbox (badness 1158) in paragraph at lines 41192--41194 []\T1/ptm/m/n/10 integer code used in []\T1/zi4/m/n/10 quantile(*, type=quantil e.type) []\T1/ptm/m/n/10 for the de-fault [636] [637] [638] [639] [640] [641] [642] [643] [644] [645] Underfull \hbox (badness 1137) in paragraph at lines 41802--41808 []\T1/ptm/m/n/10 This ex-pands tilde (see [][]tilde ex-pan-sion[][][]) and wild -cards in file paths. For pre-cise de-tails Underfull \hbox (badness 4967) in paragraph at lines 41820--41825 []\T1/ptm/m/n/10 If a file-name starts with []\T1/zi4/m/n/10 . []\T1/ptm/m/n/10 this may need to be matched ex-plic-itly: for ex-am-ple [646] [647] Underfull \hbox (badness 1616) in paragraph at lines 41943--41948 []\T1/zi4/m/n/10 system("id") []\T1/ptm/m/n/10 is much more portable on Unix-al ikes, pro-vided only the POSIX op-tions [648] [649] [650] [651] Underfull \vbox (badness 3803) has occurred while \output is active [652] [653] [654] [655] [656] Underfull \hbox (badness 1472) in paragraph at lines 42490--42493 []\T1/ptm/m/n/10 logical. If []\T1/zi4/m/n/10 TRUE[]\T1/ptm/m/n/10 , func-tions keep their source in-clud-ing com-ments, see [657] [658] [659] LaTeX Font Warning: Font shape `T1/zi4/m/sl' undefined (Font) using `T1/zi4/m/n' instead on input line 42702. [660] [661] [662] [663] [664] [665] [666] [667] [668] [669] [670] [671] Underfull \hbox (badness 10000) in paragraph at lines 43441--43445 []\T1/ptm/m/n/10 On 64-bit plat-forms []\T1/zi4/m/sl/10 bin []\T1/ptm/m/n/10 ca n have $\OT1/cmr/m/n/10 2[]$ \T1/ptm/m/n/10 or more el-e-ments (i.e., []\T1/zi4 /m/sl/10 length(bin) > [672] [673] [674] [675] [676] [677] [678] [679] [680] [681] [682] [683] [684] [685] [686] [687] [688] [689] Underfull \hbox (badness 10000) in paragraph at lines 44635--44638 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Time _ zone$[] [] \T1/ptm/m/n/10 and [][]$\T1/zi4/m/sl/10 https : / / data . iana . org / time -[]zones / [690] [691] [692] [693] [694] [695] Underfull \vbox (badness 10000) has occurred while \output is active [696] [697] [698] [699] [700] [701] [702] [703] Underfull \hbox (badness 1990) in paragraph at lines 45551--45559 []\T1/zi4/m/sl/10 try []\T1/ptm/m/n/10 eval-u-ates an ex-pres-sion and traps an y er-rors that oc-cur dur-ing the eval-u-a-tion. If Underfull \hbox (badness 4846) in paragraph at lines 45551--45559 \T1/ptm/m/n/10 an er-ror oc-curs then the er-ror mes-sage is printed to the [][ ][]\T1/zi4/m/sl/10 stderr[][][] []\T1/ptm/m/n/10 con-nec-tion un-less [704] [705] [706] [707] [708] [709] [710] [711] [712] [713] [714] [715] [716] [717] [718] [719] [720] [721] [722] [723] [724] [725] Underfull \hbox (badness 1014) in paragraph at lines 46992--46995 []\T1/ptm/m/n/10 logical, in-di-cat-ing if the warn-ing should be out-put im-me -di-ately, even if [726] [727] Underfull \hbox (badness 2401) in paragraph at lines 47125--47129 []\T1/ptm/m/n/10 See the de-scrip-tion of [][][]\T1/zi4/m/sl/10 options[][][](" warn") []\T1/ptm/m/n/10 for the cir-cum-stances un-der which there is a [728] [729] Underfull \hbox (badness 3492) in paragraph at lines 47251--47253 []\T1/zi4/m/sl/10 weekdays []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 months []\T1/ ptm/m/n/10 re-turn a char-ac-ter vec-tor of names in the lo-cale in use, i.e., [730] [731] Underfull \hbox (badness 2111) in paragraph at lines 47337--47342 \T1/ptm/m/n/10 If [][][]\T1/zi4/m/sl/10 names[][][](.dimnames) []\T1/ptm/m/n/10 is not empty, these are used as col-umn names. [732] [733] [734] Underfull \hbox (badness 4001) in paragraph at lines 47585--47587 []\T1/ptm/m/n/10 Thomas Lum-ley (2003) \T1/ptm/m/it/10 Stan-dard non-stan-dard eval-u-a-tion rules\T1/ptm/m/n/10 . [][]$\T1/zi4/m/sl/10 https : / / developer . [735] [736] [737] [738] [739] [740] [741] Underfull \hbox (badness 5417) in paragraph at lines 47987--47991 []\T1/zi4/m/sl/10 .packages() []\T1/ptm/m/n/10 re-turns the names of the cur-re ntly at-tached pack-ages \T1/ptm/m/it/10 in-vis-i-bly \T1/ptm/m/n/10 whereas [742] Underfull \hbox (badness 10000) in paragraph at lines 48048--48052 []\T1/zi4/m/sl/10 .standard_regexps []\T1/ptm/m/n/10 re-turns a list of `stan-d ard' reg-exps, in-clud-ing el-e-ments named [743]) (./compiler-pkg.tex [744] Chapter 2. [745] [746] [747] [748]) (./datasets-pkg.tex Chapter 3. [749] [750] [751] [752] [753] [754] [755] [756] [757] [758] [759] [760] [761] [762] [763] [764] [765] Underfull \hbox (badness 1097) in paragraph at lines 1034--1038 []\T1/ptm/m/n/10 MacDonell, W.R. (1902). On crim-i-nal an-thro-pom-e-try and th e iden-ti-fi-ca-tion of crim-i-nals. [766] [767] [768] [769] [770] [771] [772] [773] [774] [775] Overfull \hbox (5.23488pt too wide) in paragraph at lines 1643--1643 []\T1/zi4/m/n/9 matlines(gait[, -1, 1], gait[, -1, 2], type = "l", lty = 1, co l = adjustcolor("thistle", 1/3))[] [776] [777] [778] [779] [780] [781] [782] [783] [784] [785] [786] [787] [788] [789] [790] [791] [792] [793] [794] [795] [796] [797] [798] [799] [800] [801] [802] [803] [804] [805] [806] [807] [808] [809] [810] [811] Overfull \hbox (2.27475pt too wide) in paragraph at lines 3775--3775 []\T1/zi4/m/n/9 ## From https://pubs.usgs.gov/gip/Elevations-Distances/elvadis t.html#Geographic%20Centers[] [812] [813] [814] [815] [816] [817] [818] [819] [820] [821] [822] [823] [824] [825] [826] [827] [828] [829] [830] [831] [832] [833] [834] [835]) (./grDevices-pkg.tex [836] Chapter 4. [837] [838] [839] [840] [841] Underfull \hbox (badness 2221) in paragraph at lines 284--288 []\T1/ptm/m/n/10 numeric vec-tor of length 3, []\T1/zi4/m/sl/10 c(mi, ma, n.)[] \T1/ptm/m/n/10 , with iden-ti-cal mean-ing to Underfull \hbox (badness 10000) in paragraph at lines 299--304 []\T1/ptm/m/n/10 Apart from that, []\T1/zi4/m/sl/10 axisTicks() []\T1/ptm/m/n/1 0 just calls the C func-tion []\T1/zi4/m/sl/10 CreateAtVector() []\T1/ptm/m/n/1 0 in [842] [843] [844] [845] [846] [847] [848] [849] [850] [851] Underfull \hbox (badness 1424) in paragraph at lines 911--913 [][][]\T1/zi4/m/sl/10 NA[][][] []\T1/ptm/m/n/10 (as in-te-ger or char-ac-ter) a nd []\T1/zi4/m/sl/10 "NA" []\T1/ptm/m/n/10 mean trans-par-ent, which can also b e spec-i-fied as [852] Underfull \vbox (badness 10000) has occurred while \output is active [853] [854] [855] [856] Underfull \hbox (badness 5175) in paragraph at lines 1239--1241 []\T1/ptm/m/n/10 There is cur-rently no doc-u-men-ta-tion about the al-go-rithm . The source code is in [857] [858] Underfull \hbox (badness 2512) in paragraph at lines 1358--1360 []\T1/ptm/m/n/10 For the white points [][]$\T1/zi4/m/sl/10 https : / / web . ar chive . org / web / 20190613001950 / http : / / efg2 . com / [859] [860] [861] [862] [863] Underfull \hbox (badness 1490) in paragraph at lines 1658--1663 \T1/ptm/m/n/10 by [][][]\T1/zi4/m/sl/10 rasterImage[][][] []\T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 grid.raster[][][][]\T1/ptm/m/n/10 ? Pos-si-ble val-ues [] \T1/zi4/m/sl/10 "no"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "yes" []\T1/ptm/m/n/10 and Underfull \hbox (badness 3302) in paragraph at lines 1671--1675 []\T1/ptm/m/n/10 character: Does the de-vice sup-port pat-tern fills? One or mo re of [864] [865] [866] [867] [868] [869] Underfull \hbox (badness 1325) in paragraph at lines 2086--2096 []\T1/zi4/m/sl/10 "png48"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "pngmono"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "pnggray"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "png alpha"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp16"[]\T1/ptm/m/n/10 , []\T1/zi4/ m/sl/10 "bmp16m" "bmp256"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "bmp32b"[]\T1/ptm /m/n/10 , [870] [871] Underfull \hbox (badness 10000) in paragraph at lines 2198--2200 []\T1/ptm/m/n/10 The de-fault value when a de-vice is opened is taken from the set-ting of [872] [873] [874] Underfull \hbox (badness 6758) in paragraph at lines 2386--2389 []\T1/ptm/m/n/10 Some other op-tions which can be use-ful (see your Ghostscript doc-u-men-ta-tion) are [875] [876] [877] [878] [879] [880] [881] [882] [883] [884] [885] [886] Underfull \hbox (badness 10000) in paragraph at lines 3143--3144 [887] [888] [889] [890] [891] [892] [893] [894] [895] [896] [897] [898] Underfull \vbox (badness 3803) has occurred while \output is active [899] [900] [901] [902] Underfull \vbox (badness 10000) has occurred while \output is active [903] [904] [905] [906] Underfull \hbox (badness 1418) in paragraph at lines 4429--4436 \T1/ptm/m/n/10 it is one of []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "H elvetica-Narrow"[]\T1/ptm/m/n/10 , [907] [908] [909] [910] Underfull \hbox (badness 1152) in paragraph at lines 4716--4723 []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 pointsize[]\T1/pt m/m/n/10 , []\T1/zi4/m/sl/10 pagecentre[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 col ormodel[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 useDingbats[]\T1/ptm/m/n/10 , [911] [912] [913] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.symbol}) has been already used, duplicate ignored \relax l.4896 \aliasA{symbol}{plotmath}{symbol} [914] [915] [916] [917] Underfull \vbox (badness 3803) has occurred while \output is active [918] [919] Underfull \hbox (badness 1584) in paragraph at lines 5289--5291 []\T1/ptm/m/n/10 For type []\T1/zi4/m/sl/10 "cairo"[]\T1/ptm/m/n/10 , the []\T1 /zi4/m/sl/10 symbolfamily []\T1/ptm/m/n/10 ar-gu-ment can be sup-plied. See Underfull \hbox (badness 1067) in paragraph at lines 5293--5300 \T1/ptm/m/n/10 The lat-ter will only be avail-able if the sys-tem was com-piled with sup- [920] [921] [922] [923] Underfull \hbox (badness 1377) in paragraph at lines 5595--5600 []\T1/ptm/m/n/10 a char-ac-ter string de-scrib-ing the color model: cur-rently al-lowed val-ues [924] [925] Underfull \hbox (badness 1377) in paragraph at lines 5699--5704 []\T1/ptm/m/n/10 Color mod-els pro-vided for back-wards com-pat-i-bil-ity are [ ]\T1/zi4/m/sl/10 "rgb" []\T1/ptm/m/n/10 (which is RGB+gray) and [926] Underfull \hbox (badness 7344) in paragraph at lines 5768--5770 []\T1/ptm/m/n/10 Support for Com-puter Mod-ern fonts is based on a con-tri-bu-t ion by Brian D'Urso [927] [928] Underfull \hbox (badness 2035) in paragraph at lines 5907--5916 []\T1/ptm/m/n/10 Mappings for a num-ber of stan-dard Adobe fonts (and URW equiv -a-lents) are also pro- Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 \T1/ptm/m/n/10 vided: []\T1/zi4/m/sl/10 "AvantGarde"[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 "Bookman"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Courier"[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 "Helvetica"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "Helveti ca-Narrow"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 5907--5916 []\T1/zi4/m/sl/10 "NewCenturySchoolbook"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "P alatino" []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 "Times"[]\T1/ptm/m/n/10 ; []\T1 /zi4/m/sl/10 "URWGothic"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "URWBookman"[]\T1/ ptm/m/n/10 , [929] Underfull \hbox (badness 10000) in paragraph at lines 5973--5978 []\T1/zi4/m/sl/10 BousungEG-Light-GB []\T1/ptm/m/n/10 can be found at [][]$\T1/ zi4/m/sl/10 https : / / ftp . gnu . org / pub / non-[]gnu / [930] [931] [932] Underfull \hbox (badness 1546) in paragraph at lines 6114--6122 []\T1/ptm/m/n/10 arguments []\T1/zi4/m/sl/10 onefile[]\T1/ptm/m/n/10 , []\T1/zi 4/m/sl/10 family[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 title[]\T1/ptm/m/n/10 , [] \T1/zi4/m/sl/10 fonts[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 encoding[]\T1/ptm/m/n /10 , []\T1/zi4/m/sl/10 bg[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 fg[]\T1/ptm/m/n/ 10 , []\T1/zi4/m/sl/10 width[]\T1/ptm/m/n/10 , [933] [934] [935] [936] [937] [938] Underfull \hbox (badness 6625) in paragraph at lines 6558--6561 []\T1/ptm/m/n/10 Murrell, P., Ooms, J., Al-laire, J.J. (2015), "Record-ing and Re-play-ing the Graph- [939] [940] Underfull \hbox (badness 10000) in paragraph at lines 6662--6665 []\T1/zi4/m/sl/10 rgb2hsv []\T1/ptm/m/n/10 trans-forms col-ors from RGB space ( red/green/blue) into HSV space [941] [942] [943] [944] Overfull \hbox (9.73488pt too wide) in paragraph at lines 6899--6899 []\T1/zi4/m/n/9 ## but now, x in [-0.5, 20] -- "too far" ==> "wrap around" pro blem (without \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 continuous=TRUE\TS1/zi4/m/n/9 '\T1/ zi4/m/n/9 ):[] [945] [946] [947] [948] [949] [950] [951] [952] [953] [954] Underfull \hbox (badness 1189) in paragraph at lines 7528--7530 []\T1/ptm/m/n/10 for cairo types, the type of anti-aliasing (if any) to be used . One of [955] Underfull \hbox (badness 10000) in paragraph at lines 7633--7635 []\T1/zi4/m/sl/10 "-*-mincho-%s-%s-*-*-%d-*-*-*-*-*-*-*" []\T1/ptm/m/n/10 for C JK lan-guages and [956] [957] [958] [959] [960] [961] [962] [963] [964]) (./graphics-pkg.tex Chapter 5. [965] [966] [967] [968] [969] [970] [971] [972] [973] [974] [975] Underfull \vbox (badness 3803) has occurred while \output is active [976] [977] [978] [979] [980] [981] Overfull \hbox (12.71341pt too wide) in paragraph at lines 1038--1038 [] \T1/zi4/m/n/9 main = "barplot(Freq ~ Class + Survived, *)", ylab = " # {passengers}", legend.text = TRUE)[] [982] [983] [984] [985] [986] [987] Underfull \hbox (badness 4634) in paragraph at lines 1411--1414 [][][]\T1/zi4/m/sl/10 boxplot.default[][][] []\T1/ptm/m/n/10 which al-ready wor ks nowa-days with data.frames; [][][]\T1/zi4/m/sl/10 boxplot.formula[][][][]\T1 /ptm/m/n/10 , [988] [989] [990] [991] [992] [993] [994] [995] [996] [997] [998] [999] [1000] [1001] [1002] [1003] [1004] Underfull \hbox (badness 1728) in paragraph at lines 2389--2391 []\T1/ptm/m/n/10 a string in-di-cat-ing the x-axis style; use []\T1/zi4/m/sl/10 "n" []\T1/ptm/m/n/10 to sup-press and see also [1005] Underfull \hbox (badness 1009) in paragraph at lines 2482--2489 \T1/ptm/m/n/10 be in as-cend-ing or-der. (The rest of this de-scrip-tion does n ot ap-ply to [1006] [1007] [1008] [1009] [1010] [1011] [1012] [1013] [1014] [1015] [1016] [1017] [1018] [1019] [1020] [1021] [1022] [1023] [1024] [1025] [1026] [1027] [1028] [1029] Underfull \vbox (badness 10000) has occurred while \output is active [1030] Underfull \vbox (badness 10000) has occurred while \output is active [1031] [1032] [1033] [1034] [1035] [1036] [1037] [1038] [1039] [1040] [1041] [1042] Underfull \hbox (badness 3229) in paragraph at lines 4756--4761 []\T1/ptm/m/n/10 a char-ac-ter string in-di-cat-ing if log-a-rith-mic axes are to be used, see [1043] [1044] [1045] [1046] [1047] Underfull \hbox (badness 1107) in paragraph at lines 5255--5261 []\T1/ptm/m/n/10 is []\T1/zi4/m/sl/10 par("cin")/par("pin") []\T1/ptm/m/n/10 sc aled to user co-or-di-nates. Note that []\T1/zi4/m/sl/10 c([][]strwidth[][][](c h), [1048] [1049] Underfull \hbox (badness 10000) in paragraph at lines 5384--5387 [1050 ] Underfull \hbox (badness 10000) in paragraph at lines 5445--5447 Underfull \vbox (badness 10000) has occurred while \output is active [1051] [1052 ] [1053] [1054] [1055] [1056] [1057] [1058] [1059] [1060] [1061] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.plot}) ha s been already used, duplicate ignored \relax l.6120 \aliasA{plot}{plot.default}{plot} [1062] [1063] [1064] [1065] [1066] [1067] [1068] [1069] [1070] [1071] [1072] [1073] [1074] [1075] Overfull \hbox (31.57222pt too wide) in paragraph at lines 7026--7027 [][] [1076] [1077 ] [1078] [1079] [1080] [1081] [1082] [1083] [1084] [1085] [1086] [1087] [1088] [1089] [1090] [1091] [1092] [1093] [1094] [1095] [1096] [1097] [1098] [1099] [1100] [1101] [1102] [1103] [1104] [1105] [1106] [1107] [1108] [1109] [1110] [1111] Underfull \hbox (badness 4954) in paragraph at lines 9140--9142 []\T1/ptm/m/n/10 Sub-title (at bot-tom) us-ing font, size and color []\T1/zi4/m /sl/10 par(c("font.sub", Underfull \hbox (badness 1019) in paragraph at lines 9142--9144 []\T1/ptm/m/n/10 X axis la-bel us-ing font, size and color []\T1/zi4/m/sl/10 pa r(c("font.lab", "cex.lab", [1112] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units}) h as been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.units.1}) has been already used, duplicate ignored \relax l.9222 \HeaderA{units}{Graphical Units}{units} [1113] [1114] [1115] [1116]) (./grid-pkg.tex Chapter 6. [1117] [1118] [1119] [1120] [1121] [1122] [1123] [1124] [1125] Underfull \hbox (badness 2680) in paragraph at lines 551--554 []\T1/ptm/m/n/10 Note that []\T1/zi4/m/sl/10 preDrawDetails []\T1/ptm/m/n/10 an d []\T1/zi4/m/sl/10 postDrawDetails []\T1/ptm/m/n/10 are also called in the cal -cu-la-tion of [1126] [1127] [1128] [1129] [1130] [1131] [1132] [1133] [1134] [1135] [1136] Underfull \hbox (badness 4279) in paragraph at lines 1188--1197 [][][]\T1/ptm/m/n/10 Grid[][][], [][][]\T1/zi4/m/sl/10 pushViewport[][][][]\T1/ ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 popViewport[][][][]\T1/ptm/m/n/10 , [][][]\T 1/zi4/m/sl/10 downViewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 seekVi ewport[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 upViewport[][][][]\T1/ptm/ m/n/10 , [][][]\T1/zi4/m/sl/10 unit[][][][]\T1/ptm/m/n/10 , [1137] [1138] [1139] [1140] [1141] [1142] [1143] [1144] [1145] [1146] [1147] [1148] [1149] [1150] [1151] [1152] [1153] [1154] [1155] [1156] [1157] [1158] [1159] [1160] [1161] [1162] [1163] [1164] [1165] [1166] [1167] [1168] Underfull \hbox (badness 10000) in paragraph at lines 3103--3105 []\T1/ptm/m/n/10 A func-tion that re-turns an affine trans-for-ma-tion ma-trix; see [1169] [1170] [1171] [1172] [1173] [1174] [1175] [1176] [1177] [1178] [1179] [1180] [1181] [1182] [1183] [1184] Underfull \vbox (badness 10000) has occurred while \output is active [1185] [1186] [1187] [1188] [1189] [1190] [1191] [1192] [1193] [1194] [1195] [1196] [1197] [1198] Underfull \hbox (badness 1067) in paragraph at lines 4843--4846 []\T1/ptm/m/n/10 Both func-tions cre-ate a seg-ments grob (a graph-i-cal ob-jec t de-scrib-ing seg-ments), but only [1199] [1200] [1201] [1202] [1203] [1204] Underfull \hbox (badness 7256) in paragraph at lines 5194--5196 []\T1/ptm/m/n/10 A char-ac-ter or [][]ex-pres-sion[][][] vec-tor. Other ob-ject s are co-erced by [1205] [1206] [1207] [1208] [1209] [1210] [1211] Underfull \hbox (badness 2142) in paragraph at lines 5648--5652 []\T1/ptm/m/n/10 ob-jects. For []\T1/zi4/m/sl/10 gridGTreeCoords []\T1/ptm/m/n/ 10 a list of ei-ther []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 or [1212] [1213] Underfull \hbox (badness 4699) in paragraph at lines 5730--5735 []\T1/ptm/m/n/10 Either a []\T1/zi4/m/sl/10 "GridGrobCoords" []\T1/ptm/m/n/10 o b-ject (a list of lists with com-po-nents []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 y[]\T1/ptm/m/n/10 ) or a [1214] [1215] [1216] [1217] [1218] [1219] [1220] [1221] [1222] [1223] [1224] [1225] [1226] [1227] [1228] [1229] [1230] [1231] [1232] [1233] [1234] [1235] [1236] [1237] [1238] [1239] [1240] [1241] [1242] [1243] [1244] [1245]) (./methods-pkg.tex [1246] Chapter 7. [1247] [1248] [1249] [1250] [1251] [1252] [1253] [1254] Underfull \vbox (badness 10000) has occurred while \output is active [1255] Underfull \vbox (badness 10000) has occurred while \output is active [1256] [1257] [1258] [1259] [1260] [1261] [1262] [1263] [1264] [1265] Underfull \hbox (badness 2237) in paragraph at lines 1383--1385 []\T1/ptm/m/n/10 The class []\T1/zi4/m/sl/10 "className" []\T1/ptm/m/n/10 ex-te nds []\T1/zi4/m/sl/10 "character" []\T1/ptm/m/n/10 and has a slot []\T1/zi4/m/s l/10 "package"[]\T1/ptm/m/n/10 , also of class [1266] [1267] [1268] [1269] [1270] [1271] [1272] [1273] [1274] Underfull \hbox (badness 10000) in paragraph at lines 1979--1984 []\T1/ptm/m/n/10 The ar-gu-ment to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/m/n /10 can be an ob-ject of class Underfull \hbox (badness 1038) in paragraph at lines 1979--1984 \T1/ptm/m/n/10 file name is passed to []\T1/zi4/m/sl/10 insertSource []\T1/ptm/ m/n/10 it calls []\T1/zi4/m/sl/10 evalSource []\T1/ptm/m/n/10 to ob-tain the [1275] [1276] [1277] Underfull \hbox (badness 2213) in paragraph at lines 2211--2216 []\T1/ptm/m/n/10 To re-strict the search to classes in a par-tic-u-lar pack-age , use []\T1/zi4/m/sl/10 where = [1278] [1279] [1280] [1281] [1282] Underfull \hbox (badness 10000) in paragraph at lines 2572--2575 []\T1/ptm/m/n/10 As you might ex-pect [][][]\T1/zi4/m/sl/10 setGeneric[][][] [] \T1/ptm/m/n/10 and [][][]\T1/zi4/m/sl/10 setGroupGeneric[][][] []\T1/ptm/m/n/10 cre-ate ob-jects of class [1283] [1284] Underfull \hbox (badness 1132) in paragraph at lines 2712--2716 []\T1/ptm/m/n/10 In []\T1/zi4/m/sl/10 getGenerics[]\T1/ptm/m/n/10 , if []\T1/zi 4/m/sl/10 TRUE[]\T1/ptm/m/n/10 , the []\T1/zi4/m/sl/10 package []\T1/ptm/m/n/10 slot of the re-turned re-sult is in [1285] Underfull \hbox (badness 1033) in paragraph at lines 2748--2753 \T1/ptm/m/n/10 In ad-di-tion, []\T1/zi4/m/sl/10 removeGeneric []\T1/ptm/m/n/10 re-moves the func-tion it-self; []\T1/zi4/m/sl/10 removeMethods []\T1/ptm/m/n/1 0 re-stores the [1286] [1287] [1288] [1289] [1290] [1291] [1292] Underfull \hbox (badness 1102) in paragraph at lines 3305--3307 []\T1/zi4/m/sl/10 getPackageName []\T1/ptm/m/n/10 re-turns the character-string name of the pack-age (with-out the ex-tra-ne-ous [1293] [1294] [1295] [1296] [1297] Underfull \hbox (badness 10000) in paragraph at lines 3642--3651 []\T1/ptm/m/n/10 The [1298] [1299] Underfull \hbox (badness 10000) in paragraph at lines 3762--3763 [] \T1/zi4/m/sl/10 Pos <- setClass("Pos", slots = c(latitude = "numeric", longi tude = "numeric", [1300] Underfull \hbox (badness 10000) in paragraph at lines 3846--3847 []\T1/zi4/m/sl/10 Currency <- setClass("Currency", slots = c(unit = "character" ), contains = [1301] [1302] [1303] [1304] [1305] [1306] [1307] [1308] [1309] [1310] Underfull \hbox (badness 1769) in paragraph at lines 4477--4483 []\T1/ptm/m/n/10 class [][][]\T1/zi4/m/sl/10 MethodsList[][][] []\T1/ptm/m/n/10 for the ob-jects defin-ing sets of meth-ods as-so-ci-ated with a par-tic-u-lar Underfull \hbox (badness 1939) in paragraph at lines 4477--4483 []\T1/zi4/m/sl/10 MethodDefinition[]\T1/ptm/m/n/10 , or an ex-ten-sion. Class [ ][][]\T1/zi4/m/sl/10 MethodWithNext[][][] []\T1/ptm/m/n/10 for an ex-ten-sion u sed by [1311] [1312] [1313] [1314] [1315] [1316] [1317] [1318] [1319] Underfull \vbox (badness 10000) has occurred while \output is active [1320] [1321] [1322] Underfull \hbox (badness 4036) in paragraph at lines 5379--5382 []\T1/ptm/m/n/10 Object of class []\T1/zi4/m/sl/10 "PossibleMethod" []\T1/ptm/m /n/10 the method to use in re-sponse to a [1323] [1324] Underfull \hbox (badness 3803) in paragraph at lines 5452--5454 []\T1/ptm/m/n/10 arguments to spec-ify prop-er-ties of the new ob-ject, to be p assed to [1325] [1326] [1327] Underfull \hbox (badness 1087) in paragraph at lines 5683--5688 []\T1/ptm/m/n/10 In ad-di-tion, the cur-rently avail-able gener-ics with meth-o ds for this class are found (us-ing [1328] [1329] [1330] [1331] [1332] [1333] [1334] [1335] [1336] Underfull \hbox (badness 1675) in paragraph at lines 6390--6396 []\T1/ptm/m/n/10 can be con-verted ex-plic-itly as []\T1/zi4/m/sl/10 externalRe fMethod(f)[]\T1/ptm/m/n/10 , which re-turns an ob-ject of class [1337] [1338] [1339] [1340] Underfull \vbox (badness 10000) has occurred while \output is active [1341] [1342] [1343] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.S4}) has been already used, duplicate ignored \relax l.6911 \aliasA{S4}{S3Part}{S4} [1344] [1345] [1346] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Complex}) has been already used, duplicate ignored \relax l.7167 \aliasA{Complex}{S4groupGeneric}{Complex} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Logic}) h as been already used, duplicate ignored \relax l.7169 \aliasA{Logic}{S4groupGeneric}{Logic} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Math}) ha s been already used, duplicate ignored \relax l.7170 \aliasA{Math}{S4groupGeneric}{Math} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.matrixOps }) has been already used, duplicate ignored \relax l.7172 ...sA{matrixOps}{S4groupGeneric}{matrixOps} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Ops}) has been already used, duplicate ignored \relax l.7173 \aliasA{Ops}{S4groupGeneric}{Ops} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.Summary}) has been already used, duplicate ignored \relax l.7174 \aliasA{Summary}{S4groupGeneric}{Summary} [1347] Underfull \hbox (badness 2050) in paragraph at lines 7236--7240 []\T1/ptm/m/n/10 The mem-bers of the group de-fined by a par-tic-u-lar generic can be ob-tained by call-ing [1348] [1349] [1350] Underfull \hbox (badness 1286) in paragraph at lines 7424--7426 []\T1/ptm/m/n/10 for []\T1/zi4/m/sl/10 .selectSuperClasses() []\T1/ptm/m/n/10 o nly, a [][][]\T1/zi4/m/sl/10 list[][][] []\T1/ptm/m/n/10 of class ex-ten-sions, typ-i-cally [1351] [1352] [1353] [1354] [1355] [1356] [1357] [1358] [1359] [1360] [1361] [1362] [1363] [1364] [1365] [1366] [1367] [1368] [1369] [1370] [1371] [1372] [1373] [1374] [1375] [1376] [1377] [1378] Underfull \vbox (badness 10000) has occurred while \output is active [1379] [1380] [1381] [1382] [1383] [1384] [1385] [1386] [1387] [1388] [1389] [1390] [1391] [1392] Underfull \hbox (badness 1158) in paragraph at lines 10432--10435 []\T1/ptm/m/n/10 Chambers, John M. (2009) \T1/ptm/m/it/10 Class In-her-i-tance in R [][]$\T1/zi4/m/sl/10 https : / / johnmchambers . su . domains / [1393] Underfull \hbox (badness 1852) in paragraph at lines 10510--10514 []\T1/ptm/m/n/10 Each of the classes ex-tends the cor-re-spond-ing un-traced cl ass, from the data part; e.g., [1394] [1395] [1396] [1397]) (./parallel-pkg.tex [1398] Chapter 8. Underfull \hbox (badness 5490) in paragraph at lines 14--16 []\T1/ptm/m/n/10 There is sup-port for mul-ti-ple RNG streams with the `[]\T1/z i4/m/sl/10 "L\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 Ecuyer-CMRG"[]\T1/ptm/m/n/10 ' [] []RNG[][][]: see [1399] [1400] [1401] [1402] [1403] Underfull \hbox (badness 1320) in paragraph at lines 300--303 []\T1/ptm/m/n/10 It has meth-ods to do so for Linux, ma-cOS, FreeBSD, OpenBSD, So-laris and Win-dows. [1404] [1405] [1406] [1407] [1408] [1409] [1410] [1411] [1412] [1413] [1414] [1415] [1416] [1417] [1418] [1419] [1420] Underfull \hbox (badness 3386) in paragraph at lines 1416--1419 []\T1/ptm/m/n/10 An in-te-ger vec-tor of length 7 as given by []\T1/zi4/m/sl/10 .Random.seed []\T1/ptm/m/n/10 when the [1421] [1422] [1423]) (./splines-pkg.tex [1424] Chapter 9. Underfull \hbox (badness 10000) in paragraph at lines 22--24 []\T1/ptm/m/n/10 Douglas M. Bates \T1/zi4/m/sl/10 \T1/ptm /m/n/10 and William N. Ven-ables [1425] [1426] [1427] [1428] [1429] [1430] [1431] [1432] [1433] [1434] [1435] [1436] [1437] [1438] [1439] [1440]) (./stats-pkg.tex Chapter 10. [1441] [1442] [1443] [1444] [1445] [1446] [1447] [1448] [1449] [1450] [1451] [1452] [1453] [1454] Underfull \hbox (badness 1412) in paragraph at lines 901--903 []\T1/ptm/m/n/10 A fit-ted model ob-ject, for ex-am-ple from []\T1/zi4/m/sl/10 lm []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 aov[]\T1/ptm/m/n/10 , or a for-mula fo r [1455] [1456] [1457] [1458] [1459] [1460] [1461] [1462] Underfull \hbox (badness 2503) in paragraph at lines 1389--1392 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1463] [1464] [1465] [1466] [1467] [1468] [1469] [1470] [1471] [1472] [1473] [1474] [1475] [1476] [1477] [1478] [1479] [1480] [1481] [1482] [1483] [1484] [1485] [1486] [1487] [1488] [1489] [1490] [1491] [1492] [1493] [1494] [1495] [1496] Underfull \hbox (badness 2503) in paragraph at lines 3571--3574 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1497] [1498] Package amsmath Warning: Foreign command \atopwithdelims; (amsmath) \frac or \genfrac should be used instead (amsmath) on input line 3684. [1499] [1500] [1501] [1502] [1503] [1504] [1505] [1506] [1507] [1508] [1509] [1510] [1511] [1512] [1513] [1514] [1515] [1516] Underfull \hbox (badness 3989) in paragraph at lines 4830--4837 []\T1/ptm/m/n/10 a nu-meric vec-tor of length 2, equal to say $\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 g[]; g[]\OT1/cmr/m/n/10 )$\T1/ptm/m/n/10 , where $\OML/cmm/m/ it/10 g[] \OT1/cmr/m/n/10 = [1517] [1518] [1519] [1520] [1521] [1522] [1523] [1524] [1525] [1526] Underfull \hbox (badness 2556) in paragraph at lines 5484--5487 []\T1/ptm/m/n/10 character; par-tially matched to []\T1/zi4/m/sl/10 "circular"[ ]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "open"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "filter"[]\T1/ptm/m/n/10 . For [1527] [1528] [1529] [1530] [1531] [1532] [1533] Underfull \hbox (badness 2503) in paragraph at lines 5896--5900 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1534] [1535] [1536] [1537] [1538] [1539] [1540] [1541] [1542] [1543] [1544] [1545] [1546] Underfull \hbox (badness 7081) in paragraph at lines 6695--6698 []\T1/ptm/m/n/10 Objects of class []\T1/zi4/m/sl/10 "hclust" []\T1/ptm/m/n/10 c an be con-verted to class []\T1/zi4/m/sl/10 "dendrogram" []\T1/ptm/m/n/10 us-in g method Underfull \hbox (badness 10000) in paragraph at lines 6699--6701 []\T1/zi4/m/sl/10 rev.dendrogram []\T1/ptm/m/n/10 sim-ply re-turns the den-dro- gram []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 with re-versed nodes, see also [1547] [1548] [1549] [1550] [1551] [1552] Underfull \vbox (badness 10000) has occurred while \output is active [1553] [1554] [1555] Underfull \vbox (badness 10000) has occurred while \output is active [1556] [1557] [1558] [1559] [1560] Underfull \hbox (badness 10000) in paragraph at lines 7595--7598 []\T1/ptm/m/n/10 optionally, the dis-tance method used; re-sult-ing from []\T1/ zi4/m/sl/10 dist()[]\T1/ptm/m/n/10 , the [1561] [1562] [1563] [1564] [1565] [1566] Underfull \vbox (badness 3803) has occurred while \output is active [1567] [1568] [1569] [1570] [1571] [1572] [1573] [1574] [1575] Underfull \hbox (badness 1960) in paragraph at lines 8472--8475 []\T1/ptm/m/n/10 the [][][]\T1/zi4/m/sl/10 na.action[][][] []\T1/ptm/m/n/10 to be used if []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 is used as a for-mula, in which case [1576] [1577] [1578] [1579] [1580] [1581] [1582] Underfull \vbox (badness 3803) has occurred while \output is active [1583] [1584] [1585] [1586] [1587] [1588] Underfull \hbox (badness 2626) in paragraph at lines 9295--9298 []\T1/ptm/m/n/10 Either []\T1/zi4/m/sl/10 "convolution" []\T1/ptm/m/n/10 or []\ T1/zi4/m/sl/10 "recursive" []\T1/ptm/m/n/10 (and can be ab-bre-vi-ated). If [1589] Underfull \hbox (badness 2503) in paragraph at lines 9402--9406 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1590] [1591] [1592] [1593] [1594] [1595] [1596] [1597] [1598] [1599] [1600] [1601] [1602] [1603] [1604] [1605] [1606] [1607] [1608] [1609] [1610] Underfull \hbox (badness 4518) in paragraph at lines 10750--10755 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1611] [1612] [1613] [1614] [1615] Underfull \hbox (badness 2142) in paragraph at lines 11112--11115 []\T1/ptm/m/n/10 positive con-ver-gence tol-er-ance $\OML/cmm/m/it/10 ^^O$\T1/p tm/m/n/10 ; the it-er-a-tions con-verge when $\OMS/cmsy/m/n/10 j\OML/cmm/m/it/1 0 dev \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 1253) in paragraph at lines 11131--11134 []\T1/ptm/m/n/10 When []\T1/zi4/m/sl/10 trace []\T1/ptm/m/n/10 is true, calls t o [][][]\T1/zi4/m/sl/10 cat[][][] []\T1/ptm/m/n/10 pro-duce the out-put for eac h IWLS it-er-a-tion. Hence, [1616] Underfull \hbox (badness 1708) in paragraph at lines 11193--11197 []\T1/ptm/m/n/10 the type of resid-u-als which should be re-turned. The al-ter- na-tives are: [1617] [1618] [1619] [1620] [1621] [1622] Underfull \hbox (badness 1694) in paragraph at lines 11591--11594 []\T1/ptm/m/n/10 character vec-tors with row and col-umn la-bels to use; these de-fault to [1623] [1624] [1625] [1626] [1627] [1628] [1629] [1630] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.hat}) has been already used, duplicate ignored \relax l.12089 \aliasA{hat}{influence.measures}{hat} [1631] [1632] Underfull \hbox (badness 1484) in paragraph at lines 12234--12236 []\T1/ptm/m/n/10 The func-tion []\T1/zi4/m/sl/10 hat() []\T1/ptm/m/n/10 ex-ists mainly for S (ver-sion 2) com-pat-i-bil-ity; we rec-om-mend us-ing [1633] [1634] [1635] [1636] [1637] [1638] [1639] [1640] [1641] [1642] Underfull \hbox (badness 10000) in paragraph at lines 12821--12823 []\T1/ptm/m/n/10 tolerance even-tu-ally passed to [][][]\T1/zi4/m/sl/10 solve.d efault[][][] []\T1/ptm/m/n/10 when []\T1/zi4/m/sl/10 SSinit = [1643] [1644] [1645] [1646] [1647] [1648] Underfull \hbox (badness 2894) in paragraph at lines 13163--13167 []\T1/ptm/m/n/10 logical or in-te-ger num-ber, cur-rently only used in the de-f ault method [1649] [1650] [1651] [1652] [1653] [1654] Underfull \hbox (badness 1496) in paragraph at lines 13591--13597 []\T1/ptm/m/n/10 Gunar Schr�er and Di-et-rich Tren-kler (1995). Ex-act and Ran- dom-iza-tion Dis-tri-bu-tions of [1655] [1656] [1657] [1658] [1659] [1660] [1661] Underfull \hbox (badness 4518) in paragraph at lines 13994--13999 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1662] [1663] [1664] [1665] [1666] [1667] [1668] [1669] [1670] Underfull \hbox (badness 1596) in paragraph at lines 14625--14628 \T1/ptm/m/n/10 to []\T1/zi4/m/sl/10 print(, ...)[]\T1/ptm/m/n/10 , he nce, e.g., []\T1/zi4/m/sl/10 cutoff = []\T1/ptm/m/n/10 ; ig-nored for [1671] Underfull \hbox (badness 4518) in paragraph at lines 14683--14688 []\T1/ptm/m/n/10 an op-tional data frame, list or en-vi-ron-ment (or ob-ject co -ercible by [1672] [1673] [1674] Underfull \hbox (badness 6412) in paragraph at lines 14823--14827 []\T1/ptm/m/n/10 Only for the (de-fault) case []\T1/zi4/m/sl/10 (surface = "int erpolate", statistics = Underfull \hbox (badness 1199) in paragraph at lines 14830--14832 []\T1/ptm/m/n/10 the num-ber of it-er-a-tions used in ro-bust fit-ting, i.e. on ly if []\T1/zi4/m/sl/10 family []\T1/ptm/m/n/10 is [1675] [1676] [1677] [1678] [1679] [1680] [1681] [1682] [1683] [1684] [1685] [1686] [1687] [1688] [1689] [1690] [1691] [1692] Underfull \hbox (badness 2503) in paragraph at lines 15907--15911 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , [1693] [1694] [1695] [1696] [1697] [1698] [1699] [1700] Underfull \hbox (badness 10000) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.extract(m, "offset") []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 model.extract(m, "response") []\T1/ptm/m/n/10 are equiv-a-lent to Underfull \hbox (badness 1867) in paragraph at lines 16420--16426 []\T1/zi4/m/sl/10 model.offset(m) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 model. response(m) []\T1/ptm/m/n/10 re-spec-tively. []\T1/zi4/m/sl/10 model.offset []\ T1/ptm/m/n/10 sums any terms [1701] [1702] [1703] [1704] [1705] [1706] [1707] [1708] [1709] [1710] [1711] [1712] [1713] [1714] [1715] [1716] [1717] [1718] [1719] [1720] [1721] [1722] [1723] [1724] [1725] [1726] [1727] Underfull \hbox (badness 1158) in paragraph at lines 18078--18081 []\T1/ptm/m/n/10 the ex-pres-sion that was passed to []\T1/zi4/m/sl/10 nls []\T 1/ptm/m/n/10 as the data ar-gu-ment. The ac- [1728] [1729] Underfull \vbox (badness 10000) has occurred while \output is active [1730] Underfull \vbox (badness 10000) has occurred while \output is active [1731] [1732] [1733] [1734] [1735] [1736] [1737] [1738] [1739] [1740] [1741] [1742] [1743] [1744] Underfull \hbox (badness 1377) in paragraph at lines 19123--19128 []\T1/ptm/m/n/10 A vec-tor of scal-ing val-ues for the pa-ram-e-ters. Op-ti-miz a-tion is per-formed on Underfull \hbox (badness 1735) in paragraph at lines 19128--19131 []\T1/ptm/m/n/10 A vec-tor of step sizes for the finite-difference ap-prox-i-ma -tion to the gra-di-ent, on Underfull \hbox (badness 2343) in paragraph at lines 19141--19145 []\T1/ptm/m/n/10 Relative con-ver-gence tol-er-ance. The al-go-rithm stops if i t is un-able to re-duce Underfull \hbox (badness 3471) in paragraph at lines 19141--19145 \T1/ptm/m/n/10 the value by a fac-tor of []\T1/zi4/m/sl/10 reltol * (abs(val) + reltol) []\T1/ptm/m/n/10 at a step. De-faults to Underfull \hbox (badness 2662) in paragraph at lines 19149--19153 []\T1/ptm/m/n/10 The fre-quency of re-ports for the []\T1/zi4/m/sl/10 "BFGS"[]\ T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "L-BFGS-B" []\T1/ptm/m/n/10 and []\T1/zi4/m/s l/10 "SANN" []\T1/ptm/m/n/10 meth-ods if [1745] [1746] [1747] Underfull \vbox (badness 10000) has occurred while \output is active [1748] Overfull \hbox (15.73795pt too wide) in paragraph at lines 19374--19374 []\T1/zi4/m/n/9 ## 1-D minimization: "Brent" or optimize() being preferred.. b ut NM may be ok and "unavoidable",[] Overfull \hbox (3.75941pt too wide) in paragraph at lines 19377--19377 []\T1/zi4/m/n/9 system.time(ro <- optim(1, function(x) (x-pi)^2, control=list( warn.1d.NelderMead = FALSE)))[] [1749] [1750] [1751] [1752] [1753] [1754] [1755] Underfull \hbox (badness 1337) in paragraph at lines 19839--19842 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1756] [1757] [1758] [1759] [1760] [1761] [1762] [1763] [1764] Underfull \hbox (badness 10000) in paragraph at lines 20308--20314 \T1/zi4/m/sl/10 legend = "Cook\TS1/zi4/m/n/10 '\T1/zi4/m/sl/10 s distance", lty = cook.lty, col = cook.col, text.col [1765] [1766] [1767] [1768] [1769] [1770] [1771] Underfull \hbox (badness 1194) in paragraph at lines 20735--20738 []\T1/ptm/m/n/10 coverage prob-a-bil-ity for con-fi-dence in-ter-val. Plot-ting of the con-fi-dence [1772] [1773] [1774] [1775] [1776] [1777] Underfull \hbox (badness 2503) in paragraph at lines 21113--21116 []\T1/ptm/m/n/10 indicates the al-ter-na-tive hy-poth-e-sis and must be one of []\T1/zi4/m/sl/10 "two.sided"[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3919) in paragraph at lines 21140--21142 []\T1/ptm/m/n/10 the char-ac-ter string []\T1/zi4/m/sl/10 "Exact Poisson test" []\T1/ptm/m/n/10 or []\T1/zi4/m/sl/10 "Comparison of Poisson [1778] [1779] [1780] [1781] [1782] [1783] [1784] [1785] [1786] [1787] [1788] [1789] [1790] [1791] [1792] [1793] [1794] [1795] Underfull \hbox (badness 10000) in paragraph at lines 22218--22224 []\T1/ptm/m/n/10 For time-series pre-dic-tion, [][][]\T1/zi4/m/sl/10 predict.ar [][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 predict.Arima[][][][]\T1/ptm/m/n /10 , [][][]\T1/zi4/m/sl/10 predict.arima0[][][][]\T1/ptm/m/n/10 , [1796] [1797] [1798] [1799] [1800] [1801] [1802] [1803] [1804] [1805] [1806] [1807] [1808] [1809] [1810] [1811] [1812] [1813] [1814] [1815] [1816] [1817] [1818] [1819] [1820] Underfull \hbox (badness 1337) in paragraph at lines 23694--23700 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1821] [1822] [1823] [1824] [1825] [1826] [1827] [1828] Underfull \hbox (badness 1436) in paragraph at lines 24186--24189 \T1/ptm/m/n/10 per-cent-ages. In \T1/phv/m/n/10 R \T1/ptm/m/n/10 ver-sions up t o 4.0.x, this had been set to []\T1/zi4/m/sl/10 max(2, Underfull \hbox (badness 1009) in paragraph at lines 24189--24192 []\T1/ptm/m/n/10 small non-negative num-ber to pro-tect against round-ing er-ro rs when []\T1/zi4/m/sl/10 j <- [1829] [1830] Underfull \hbox (badness 10000) in paragraph at lines 24341--24342 []\T1/ptm/m/n/10 Wikipedia: [][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . o rg / wiki / Quantile # Estimating _ quantiles _ from _ a _ [1831] [1832] [1833] [1834] [1835] [1836] [1837] [1838] [1839] [1840] [1841] [1842] [1843] [1844] [1845] [1846] Underfull \hbox (badness 1824) in paragraph at lines 25313--25319 []\T1/ptm/m/n/10 Here, all the NAs in []\T1/zi4/m/sl/10 x []\T1/ptm/m/n/10 are first re-placed by al-ter- Underfull \hbox (badness 1033) in paragraph at lines 25313--25319 \T1/ptm/m/n/10 nat-ing $\OMS/cmsy/m/n/10 ^^F\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 where $\OML/cmm/m/it/10 B$ \T1/ptm/m/n/10 is a ``Big'' num-ber (with $\OT1/cmr/ m/n/10 2\OML/cmm/m/it/10 B < M\OMS/cmsy/m/n/10 ^^C$\T1/ptm/m/n/10 , where Underfull \hbox (badness 10000) in paragraph at lines 25334--25337 []\T1/ptm/m/n/10 Apart from the end val-ues, the re-sult []\T1/zi4/m/sl/10 y = runmed(x, k) []\T1/ptm/m/n/10 sim-ply has []\T1/zi4/m/sl/10 y[j] = [1847] [1848] [1849] [1850] [1851] [1852] [1853] [1854] Underfull \vbox (badness 10000) has occurred while \output is active [1855] [1856] Underfull \hbox (badness 2165) in paragraph at lines 25909--25914 []\T1/ptm/m/n/10 Each of the fol-low-ing are []\T1/zi4/m/sl/10 "selfStart" []\T 1/ptm/m/n/10 mod-els (with ex-am-ples) [][][]\T1/zi4/m/sl/10 SSasymp[][][][]\T1 /ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 SSasympOff[][][][]\T1/ptm/m/n/10 , [1857] [1858] [1859] Underfull \hbox (badness 1867) in paragraph at lines 26119--26121 []\T1/ptm/m/n/10 potentially fur-ther ar-gu-ments passed to and from meth-ods. Passed to Underfull \hbox (badness 10000) in paragraph at lines 26135--26139 []\T1/ptm/m/n/10 where []\T1/zi4/m/sl/10 NN <- [][]nobs[][][](object, use.fallb ack = use.fallback) []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 PP <- [1860] [1861] [1862] [1863] [1864] [1865] [1866] [1867] [1868] [1869] [1870] [1871] [1872] [1873] [1874] [1875] [1876] [1877] [1878] [1879] [1880] [1881] [1882] [1883] [1884] [1885] Underfull \vbox (badness 10000) has occurred while \output is active [1886] Underfull \hbox (badness 3514) in paragraph at lines 27787--27792 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1887] [1888] [1889] [1890] Overfull \hbox (2.23795pt too wide) in paragraph at lines 28021--28021 [] \T1/zi4/m/n/9 quote({f(t[0.5]) == frac(phi[1],2)}~{} %=>% {}~~{t[0.5] == frac(log(2), e^{phi[2]})}),[] [1891] Underfull \hbox (badness 3514) in paragraph at lines 28057--28063 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1892] Overfull \hbox (14.22568pt too wide) in paragraph at lines 28117--28117 [] \T1/zi4/m/n/9 control = list(scaleOffset=1, printEval=TRUE, tol= 1e-11, nDcentral=TRUE), trace=TRUE)[] [1893] [1894] [1895] Underfull \hbox (badness 3514) in paragraph at lines 28290--28295 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1896] [1897] Underfull \hbox (badness 3514) in paragraph at lines 28377--28382 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1898] Underfull \hbox (badness 3514) in paragraph at lines 28442--28447 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1899] [1900] Underfull \hbox (badness 3514) in paragraph at lines 28536--28541 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 inp ut[]\T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1901] Underfull \hbox (badness 6691) in paragraph at lines 28628--28633 []\T1/ptm/m/n/10 a nu-meric vec-tor of the same length as []\T1/zi4/m/sl/10 x[] \T1/ptm/m/n/10 . It is the value of the ex-pres-sion [1902] [1903] [1904] [1905] [1906] [1907] [1908] [1909] Underfull \hbox (badness 4024) in paragraph at lines 29115--29118 []\T1/ptm/m/n/10 the span (in lags) of the loess win-dow for trend ex-trac-tion , which [1910] [1911] [1912] [1913] [1914] [1915] [1916] [1917] [1918] [1919] Underfull \hbox (badness 5431) in paragraph at lines 29725--29727 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1920] [1921] [1922] [1923] Underfull \hbox (badness 5431) in paragraph at lines 29935--29938 []\T1/ptm/m/n/10 the cor-re-la-tion ma-trix cor-re-spond-ing to the above []\T1 /zi4/m/sl/10 cov.unscaled[]\T1/ptm/m/n/10 , if [1924] [1925] [1926] [1927] [1928] Underfull \hbox (badness 1337) in paragraph at lines 30250--30254 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1929] [1930] [1931] Underfull \hbox (badness 1127) in paragraph at lines 30387--30390 []\T1/ptm/m/n/10 non-centrality pa-ram-e-ter $\OML/cmm/m/it/10 ^^N$\T1/ptm/m/n/ 10 ; cur-rently ex-cept for []\T1/zi4/m/sl/10 rt()[]\T1/ptm/m/n/10 , ac-cu-rate only for [1932] [1933] [1934] Underfull \hbox (badness 1616) in paragraph at lines 30593--30596 []\T1/ptm/m/n/10 color, plot-ting char-ac-ter ex-pan-sion and type for par-tial resid-u-als, when [1935] [1936] [1937] [1938] [1939] [1940] [1941] [1942] [1943] [1944] [1945] [1946] [1947] [1948] [1949] [1950] [1951] [1952] [1953] [1954] Underfull \hbox (badness 3557) in paragraph at lines 31823--31827 []\T1/ptm/m/n/10 Setting []\T1/zi4/m/sl/10 extendInt []\T1/ptm/m/n/10 to a non- []\T1/zi4/m/sl/10 "no" []\T1/ptm/m/n/10 string, means search-ing for the cor-re ct []\T1/zi4/m/sl/10 interval = [1955] [1956] [1957] Underfull \vbox (badness 10000) has occurred while \output is active [1958] [1959] [1960] Underfull \hbox (badness 1337) in paragraph at lines 32190--32194 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1961] [1962] [1963] [1964] [1965] [1966] [1967] [1968] [1969] Underfull \hbox (badness 1337) in paragraph at lines 32718--32722 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the al-ter-na-tive hy-poth- e-sis, must be one of [1970] [1971] [1972] Overfull \hbox (0.71648pt too wide) in paragraph at lines 32926--32926 []\T1/zi4/m/n/9 wilcox.test( 4:2, 3:1, paired=TRUE) # Warning: canno t compute exact p-value with ties[] [1973] [1974] [1975] Overfull \hbox (19.71954pt too wide) in paragraph at lines 33087--33087 [] \T1/zi4/m/sl/10 frequency = NULL, deltat = NULL, extend = FALSE, ts.ep s = getOption("ts.eps"), ...)[] [1976] [1977] [1978] [1979] [1980]) (./stats4-pkg.tex Chapter 11. [1981] [1982] [1983] Underfull \vbox (badness 10000) has occurred while \output is active [1984] Underfull \vbox (badness 10000) has occurred while \output is active [1985] [1986] [1987] [1988] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.show.Rdas h.methods}) has been already used, duplicate ignored \relax l.503 ...Package \pkg{stats4}}{show.Rdash.methods} [1989] [1990] [1991]) (./tcltk-pkg.tex [1992] Chapter 12. [1993] [1994] [1995] [1996] [1997] [1998] [1999] Underfull \vbox (badness 10000) has occurred while \output is active [2000] Underfull \vbox (badness 10000) has occurred while \output is active [2001] Underfull \hbox (badness 1546) in paragraph at lines 672--679 []\T1/zi4/m/sl/10 tcl []\T1/ptm/m/n/10 pro-vides a generic in-ter-face to call- ing any Tk or Tcl com-mand by sim-ply run-ning [2002] [2003] [2004] [2005] [2006] Underfull \vbox (badness 10000) has occurred while \output is active [2007] [2008] [2009] [2010] [2011] [2012] [2013] [2014]) (./tools-pkg.tex Chapter 13. [2015] LaTeX Font Warning: Font shape `T1/zi4/m/it' undefined (Font) using `T1/zi4/m/n' instead on input line 72. [2016] Underfull \hbox (badness 3039) in paragraph at lines 167--170 []\T1/zi4/m/sl/10 assertWarning() []\T1/ptm/m/n/10 as-serts that a warn-ing wil l be sig-nalled, but \T1/ptm/m/it/10 not \T1/ptm/m/n/10 an er-ror, whereas [2017] [2018] [2019] Underfull \hbox (badness 1308) in paragraph at lines 326--339 []\T1/ptm/m/n/10 At a min-i-mum, the en-vi-ron-ment should con-tain rou-tines t o ren-der each of the 12 types Underfull \hbox (badness 4967) in paragraph at lines 326--339 \T1/ptm/m/n/10 of bib-li-o-graphic en-try sup-ported by [][][]\T1/zi4/m/sl/10 b ibentry[][][] []\T1/ptm/m/n/10 as well as sev-eral other rou-tines de- Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatIncollection[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 format InProceedings[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatManual[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatMastersthesis[]\T1/ptm/m/n/10 , Underfull \hbox (badness 10000) in paragraph at lines 326--339 []\T1/zi4/m/sl/10 formatMisc[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatPhdthesi s[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 formatProceedings[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 formatTechreport []\T1/ptm/m/n/10 and [2020] [2021] Underfull \hbox (badness 3039) in paragraph at lines 430--432 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or char-ac-ter; name of vi-gnette en-gi ne to use. Over-rides any [2022] Underfull \hbox (badness 1142) in paragraph at lines 502--506 \T1/ptm/m/n/10 If given, vi-gnette source files are by de-fault looked for in s ub-di-rec-tory [2023] [2024] [2025] [2026] [2027] [2028] [2029] [2030] [2031] [2032] [2033] [2034] [2035] Underfull \hbox (badness 1014) in paragraph at lines 1258--1260 []\T1/ptm/m/n/10 a log-i-cal in-di-cat-ing whether to also sum-ma-rize the re-v erse de-pen-den-cies Underfull \hbox (badness 7238) in paragraph at lines 1264--1266 []\T1/ptm/m/n/10 a char-ac-ter string giv-ing the path to the di-rec-tory of a pre-vi-ous [2036] Underfull \hbox (badness 10000) in paragraph at lines 1301--1304 []\T1/ptm/m/n/10 Results and tim-ings can con-ve-niently be sum-ma-rized us-ing Overfull \hbox (15.52087pt too wide) in paragraph at lines 1301--1304 []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_results []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 summarize_check_packages_in_dir_timings[]\T1/ptm/m/n/10 , [2037] [2038] [2039] [2040] [2041] [2042] Underfull \hbox (badness 10000) in paragraph at lines 1696--1707 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 CRAN_package_db()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CRAN_check_results()[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 CR AN_check_details() []\T1/ptm/m/n/10 and [2043] [2044] Underfull \hbox (badness 4096) in paragraph at lines 1847--1855 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2045] Underfull \hbox (badness 1082) in paragraph at lines 1857--1859 []\T1/ptm/m/n/10 a char-ac-ter vec-tor of \T1/phv/m/n/10 R \T1/ptm/m/n/10 li-br ary trees, or []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 for all known trees (see [2046] [2047] [2048] [2049] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.GSC}) has been already used, duplicate ignored \relax l.2102 \aliasA{GSC}{find\_gs\_cmd}{GSC} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.R.Rul.GSC MD}) has been already used, duplicate ignored \relax l.2103 ...sA{R\_GSCMD}{find\_gs\_cmd}{R.Rul.GSCMD} [2050] [2051] [2052] [2053] [2054] [2055] [2056] [2057] Underfull \hbox (badness 3386) in paragraph at lines 2644--2647 []\T1/ptm/m/n/10 The de-fault method of []\T1/zi4/m/sl/10 as.Rconcordance []\T1 /ptm/m/n/10 searches for strings match-ing the pat-tern of [2058] [2059] [2060] Underfull \hbox (badness 4096) in paragraph at lines 2791--2799 \T1/zi4/m/sl/10 "Imports", "LinkingTo", "Suggests", "Enhances")[]\T1/ptm/m/n/10 . Char-ac-ter string [2061] [2062] [2063] [2064] [2065] [2066] [2067] [2068] [2069] [2070] [2071] [2072] [2073] [2074] [2075] [2076] Underfull \hbox (badness 1424) in paragraph at lines 3815--3817 []\T1/zi4/m/sl/10 NULL []\T1/ptm/m/n/10 or a named (by top-ics) char-ac-ter vec -tor of links, as re-turned by [2077] [2078] [2079] [2080] [2081] [2082] [2083] [2084] [2085] [2086] [2087] [2088] Underfull \hbox (badness 10000) in paragraph at lines 4591--4593 []\T1/ptm/m/n/10 additional ar-gu-ments use when prepar-ing the files to be run , [2089] [2090] [2091] [2092] [2093] [2094] Overfull \hbox (6.71034pt too wide) in paragraph at lines 4913--4913 []\T1/zi4/m/n/9 toTitleCase("a small fox is jumping") # "a Small Fox is .." (the \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 a\TS1/zi4/m/n/9 ' \T1/zi4/m/n/9 may cha nge)% i.e. BUG[] [2095] [2096] [2097] Underfull \hbox (badness 1796) in paragraph at lines 5122--5127 []\T1/ptm/m/n/10 Users should ex-pect sig-nif-i-cantly smaller speedups over [] \T1/zi4/m/sl/10 write_PACKAGES []\T1/ptm/m/n/10 in the []\T1/zi4/m/sl/10 type = = [2098] Underfull \hbox (badness 1838) in paragraph at lines 5208--5214 []\T1/ptm/m/n/10 The re-main-ing steps are done only if file `\T1/zi4/m/sl/10 p o/\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 .pot\T1/ptm/m/n/10 ' al-ready ex-ists. The Underfull \hbox (badness 10000) in paragraph at lines 5208--5214 \T1/ptm/m/n/10 `\T1/zi4/m/sl/10 src/*.{c,cc,cpp,m,mm}\T1/ptm/m/n/10 ' files in the pack-age are ex-am-ined to cre-ate a file [2099] [2100] [2101] [2102] [2103] [2104] Underfull \hbox (badness 2197) in paragraph at lines 5560--5570 []\T1/ptm/m/n/10 The de-fault cor-re-sponds to the fields needed by [][][]\T1/z i4/m/sl/10 available.packages[][][][]\T1/ptm/m/n/10 : [2105] Underfull \hbox (badness 1571) in paragraph at lines 5626--5630 []\T1/ptm/m/n/10 For a re-mote repos-i-tory there is a trade-off be-tween down- load speed and time spent by [2106] [2107] [2108] [2109]) (./utils-pkg.tex [2110] Chapter 14. [2111] Underfull \hbox (badness 2556) in paragraph at lines 47--52 []\T1/ptm/m/n/10 a nu-meric vec-tor or list with names par-tially match-ing `[] \T1/zi4/m/sl/10 insertions[]\T1/ptm/m/n/10 ', [2112] [2113] [2114] [2115] [2116] [2117] [2118] [2119] [2120] [2121] Underfull \hbox (badness 10000) in paragraph at lines 728--734 []\T1/ptm/m/n/10 Functions []\T1/zi4/m/sl/10 aspell_package_Rd_files[]\T1/ptm/m /n/10 , []\T1/zi4/m/sl/10 aspell_package_vignettes[]\T1/ptm/m/n/10 , Underfull \hbox (badness 3343) in paragraph at lines 728--734 []\T1/zi4/m/sl/10 aspell_package_R_files []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 aspell_package_C_files []\T1/ptm/m/n/10 per-form spell check-ing on the [2122] [2123] [2124] Underfull \hbox (badness 3861) in paragraph at lines 943--948 []\T1/ptm/m/n/10 Where pro-vided by the repos-i-tory, fields []\T1/zi4/m/sl/10 "OS_type"[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 "License"[]\T1/ptm/m/n/10 , []\T1 /zi4/m/sl/10 "License_is_FOSS"[]\T1/ptm/m/n/10 , [2125] [2126] [2127] Underfull \hbox (badness 10000) in paragraph at lines 1148--1150 []\T1/ptm/m/n/10 logical in-di-cat-ing if biben-tries should be sorted, us-ing [2128] [2129] [2130] Underfull \vbox (badness 3803) has occurred while \output is active [2131] [2132] [2133] [2134] [2135] [2136] Underfull \hbox (badness 1371) in paragraph at lines 1675--1677 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2137] [2138] [2139] [2140] [2141] [2142] [2143] [2144] [2145] [2146] [2147] Underfull \hbox (badness 2057) in paragraph at lines 2395--2397 []\T1/ptm/m/n/10 None for []\T1/zi4/m/sl/10 chooseCRANmirror()[]\T1/ptm/m/n/10 , this func-tion is in-voked for its side ef-fect of up-dat-ing [2148] [2149] Underfull \hbox (badness 2150) in paragraph at lines 2481--2488 []\T1/ptm/m/n/10 If the ob-ject re-turned by []\T1/zi4/m/sl/10 citation() []\T1 /ptm/m/n/10 con-tains only one ref-er-ence, the as-so-ci-ated print Underfull \hbox (badness 1400) in paragraph at lines 2481--2488 \T1/ptm/m/n/10 method shows both a text ver-sion and a Bib-TeX en-try for it. I f a pack-age has more [2150] [2151] [2152] [2153] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.clipboard }) has been already used, duplicate ignored \relax l.2758 ... the Clipboard in MS Windows}{clipboard} [2154] [2155] [2156] [2157] [2158] [2159] [2160] [2161] [2162] [2163] [2164] [2165] [2166] [2167] [2168] [2169] [2170] [2171] [2172] [2173] [2174] Underfull \hbox (badness 6842) in paragraph at lines 4068--4073 []\T1/ptm/m/n/10 Support for method []\T1/zi4/m/sl/10 "libcurl" []\T1/ptm/m/n/1 0 was op-tional on Win-dows prior to \T1/phv/m/n/10 R \T1/ptm/m/n/10 4.2.0: use [2175] Underfull \hbox (badness 1430) in paragraph at lines 4131--4135 []\T1/ptm/m/n/10 The level of de-tail pro-vided dur-ing trans-fer can be set by the []\T1/zi4/m/sl/10 quiet []\T1/ptm/m/n/10 ar-gu-ment and the [2176] Underfull \hbox (badness 1184) in paragraph at lines 4207--4223 []\T1/ptm/m/n/10 On Win-dows with []\T1/zi4/m/sl/10 method = "libcurl"[]\T1/ptm /m/n/10 , the CA root cer-tifi-cates are pro-vided by the OS Underfull \hbox (badness 1019) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 con-tain-ing `[]\T1/zi4/m/sl/10 "Schannel"[]\T1/ptm/m/n/10 '. If it does not, for ver-i-fi-ca-tion to be on the en-vi-ron-ment vari- Underfull \hbox (badness 1668) in paragraph at lines 4207--4223 \T1/ptm/m/n/10 able []\T1/zi4/m/sl/10 CURL_CA_BUNDLE []\T1/ptm/m/n/10 must be s et to a path to a cer-tifi-cate bun-dle file, usu-ally named [2177] [2178] Underfull \hbox (badness 10000) in paragraph at lines 4357--4359 []\T1/ptm/m/n/10 additional ar-gu-ments to be passed to [][][]\T1/zi4/m/sl/10 d ownload.file[][][] []\T1/ptm/m/n/10 and [2179] [2180] [2181] [2182] [2183] [2184] [2185] [2186] [2187] [2188] [2189] [2190] [2191] pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format}) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} pdfTeX warning (ext4): destination with the same identifier (name{Rfn.format.1} ) has been already used, duplicate ignored \relax l.5136 ...mat Unordered and Ordered Lists}{format} [2192] [2193] [2194] [2195] [2196] [2197] [2198] [2199] Underfull \hbox (badness 1622) in paragraph at lines 5659--5663 []\T1/ptm/m/n/10 This func-tion will search for Win-dows han-dles, for pass-ing to ex-ter-nal GUIs or to the [2200] [2201] [2202] [2203] [2204] [2205] Underfull \hbox (badness 1448) in paragraph at lines 6044--6049 []\T1/ptm/m/n/10 External pointer ob-jects are com-pared as ref-er-ence ob-ject s, cor-re-spond-ing to call-ing [2206] [2207] [2208] [2209] [2210] [2211] [2212] [2213] Underfull \hbox (badness 1371) in paragraph at lines 6602--6604 []\T1/ptm/m/n/10 additional named ar-gu-ments such as []\T1/zi4/m/sl/10 method []\T1/ptm/m/n/10 and []\T1/zi4/m/sl/10 ccaddress []\T1/ptm/m/n/10 to pass to [2214] [2215] Underfull \hbox (badness 1502) in paragraph at lines 6691--6697 []\T1/ptm/m/n/10 a char-ac-ter string to be matched in the help page `key-words '. `Key- Underfull \hbox (badness 2103) in paragraph at lines 6691--6697 \T1/ptm/m/n/10 words' are re-ally cat-e-gories: the stan-dard cat-e-gories are listed in file [2216] [2217] [2218] Underfull \hbox (badness 10000) in paragraph at lines 6871--6880 []\T1/ptm/m/n/10 One of the links on the in-dex page is the HTML pack-age in-de x, Underfull \hbox (badness 3354) in paragraph at lines 6871--6880 \T1/ptm/m/n/10 `\T1/ptm/m/sl/10 R_DOC_DIR\T1/zi4/m/sl/10 /html/packages.html\T1 /ptm/m/n/10 ', which can be re-made by [][][]\T1/zi4/m/sl/10 make.packages.html [][][]()[]\T1/ptm/m/n/10 . [2219] Underfull \hbox (badness 2150) in paragraph at lines 6933--6936 []\T1/ptm/m/n/10 a char-ac-ter vec-tor list-ing the types of doc-u-men-ta-tion to search. See [2220] [2221] Underfull \hbox (badness 3118) in paragraph at lines 7072--7074 []\T1/ptm/m/n/10 For de-tails of the lock-ing which is done, see the sec-tion ` Lock-ing' in the help for [2222] [2223] Underfull \hbox (badness 1325) in paragraph at lines 7250--7254 []\T1/ptm/m/n/10 a ma-trix as re-turned by [][][]\T1/zi4/m/sl/10 available.pack ages[][][] []\T1/ptm/m/n/10 list-ing pack-ages avail-able [2224] Underfull \hbox (badness 1424) in paragraph at lines 7343--7346 []\T1/ptm/m/n/10 logical: if true, re-duce the amount of out-put. This is \T1/p tm/m/it/10 not \T1/ptm/m/n/10 passed to [2225] Underfull \hbox (badness 3219) in paragraph at lines 7424--7431 []\T1/ptm/m/n/10 An al-ter-na-tive (and the cur-rent de-fault) is []\T1/zi4/m/s l/10 "both" []\T1/ptm/m/n/10 which means `use bi-nary if avail- Underfull \hbox (badness 5175) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 able and cur-rent, oth-er-wise try source'. The ac-tion if there are source pack-ages Underfull \hbox (badness 1342) in paragraph at lines 7424--7431 \T1/ptm/m/n/10 which are pre-ferred but may con-tain code which needs to be com -piled is con-trolled by Underfull \hbox (badness 1596) in paragraph at lines 7424--7431 [][][]\T1/zi4/m/sl/10 getOption[][][]("install.packages.compile.from.source")[] \T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 type = "both" []\T1/ptm/m/n/10 will be silen tly [2226] Underfull \hbox (badness 2932) in paragraph at lines 7432--7435 []\T1/ptm/m/n/10 Using pack-ages with []\T1/zi4/m/sl/10 type = "source" []\T1/p tm/m/n/10 al-ways works pro-vided the pack-age con-tains no [2227] Underfull \hbox (badness 1024) in paragraph at lines 7561--7564 []\T1/ptm/m/n/10 For other repos-i-to-ries, us-ing []\T1/zi4/m/sl/10 available. packages(filters = "OS_type")[\T1/ptm/m/sl/10 pkgname\T1/zi4/m/sl/10 , ] []\T1/ ptm/m/n/10 will [2228] Underfull \hbox (badness 10000) in paragraph at lines 7594--7599 [][][]\T1/zi4/m/sl/10 update.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/s l/10 available.packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 download. packages[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 installed.packages[][][] []\T1/ptm/m/n/10 , Underfull \hbox (badness 5133) in paragraph at lines 7660--7664 []\T1/ptm/m/n/10 a char-ac-ter vec-tor giv-ing the fields to ex-tract from each pack-age's [2229] [2230] [2231] [2232] [2233] [2234] [2235] [2236] [2237] [2238] [2239] [2240] Underfull \hbox (badness 10000) in paragraph at lines 8327--8329 []\T1/ptm/m/n/10 typically the re-sult of []\T1/zi4/m/sl/10 methods(..)[]\T1/pt m/m/n/10 , an \T1/phv/m/n/10 R \T1/ptm/m/n/10 ob-ject of S3 class [2241] [2242] [2243] [2244] [2245] [2246] [2247] [2248] [2249] [2250] [2251] [2252] Underfull \hbox (badness 2310) in paragraph at lines 9114--9119 []\T1/ptm/m/n/10 If a `\T1/zi4/m/sl/10 DESCRIPTION\T1/ptm/m/n/10 ' file for the given pack-age is found and can suc-cess-fully be read, [2253] [2254] [2255] [2256] [2257] [2258] [2259] [2260] [2261] Underfull \hbox (badness 1248) in paragraph at lines 9691--9695 []\T1/zi4/m/sl/10 R CMD build []\T1/ptm/m/n/10 builds \T1/phv/m/n/10 R \T1/ptm/ m/n/10 source tar-balls. The name(s) of the pack-ages are taken from the [2262] [2263] Underfull \hbox (badness 1789) in paragraph at lines 9769--9771 []\T1/ptm/m/n/10 See `Writ-ing R Ex-ten-sions' and the `R for Win-dows FAQ' for more dis-cus-sion of the [2264] [2265] [2266] [2267] Underfull \hbox (badness 2600) in paragraph at lines 9993--9996 []\T1/ptm/m/n/10 a char-ac-ter string spec-i-fy-ing the name of the help topic; de-faults to [2268] [2269] [2270] [2271] [2272] [2273] [2274] [2275] [2276] Underfull \hbox (badness 1097) in paragraph at lines 10630--10633 []\T1/ptm/m/n/10 The name []\T1/zi4/m/sl/10 "clipboard" []\T1/ptm/m/n/10 may al so be used on Win-dows, in which case [2277] [2278] Underfull \hbox (badness 3000) in paragraph at lines 10766--10771 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 read.table[][][][]\T1/ptm/m/n/10 ; [2279] [2280] [2281] [2282] [2283] [2284] [2285] [2286] [2287] Underfull \hbox (badness 2134) in paragraph at lines 11361--11366 [][][]\T1/zi4/m/sl/10 scan[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 type.c onvert[][][][]\T1/ptm/m/n/10 , [][][]\T1/zi4/m/sl/10 read.fwf[][][] []\T1/ptm/m /n/10 for read-ing \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ixed \T1/ptm/m/it/10 w\T1/pt m/m/n/10 idth \T1/ptm/m/it/10 f\T1/ptm/m/n/10 ormatted in-put; [][][]\T1/zi4/m/ sl/10 write.table[][][][]\T1/ptm/m/n/10 ; [2288] Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/ptm/m/n/10 The `hive' con-tain-ing the key. The ab-bre-vi-a-tions are for Underfull \hbox (badness 10000) in paragraph at lines 11417--11422 []\T1/zi4/m/sl/10 HKEY_LOCAL_MACHINE[]\T1/ptm/m/n/10 , []\T1/zi4/m/sl/10 HKEY_C LASSES_ROOT[]\T1/ptm/m/n/10 . []\T1/zi4/m/sl/10 HKEY_CURRENT_USER[]\T1/ptm/m/n/ 10 , [2289] [2290] [2291] [2292] [2293] [2294] [2295] [2296] Underfull \hbox (badness 1824) in paragraph at lines 11915--11919 \T1/zi4/m/sl/10 / / en . wikipedia . org / w / index . php ? title = Roman _ nu merals & oldid = 1188781837$[][]\T1/ptm/m/n/10 . Ac-cessed [2297] [2298] [2299] [2300] [2301] [2302] [2303] Underfull \hbox (badness 4060) in paragraph at lines 12361--12364 []\T1/ptm/m/n/10 If `[]\T1/zi4/m/sl/10 --default-packages[]\T1/ptm/m/n/10 ' is not used, then []\T1/zi4/m/sl/10 Rscript []\T1/ptm/m/n/10 checks the en-vi-ron- ment vari-able Overfull \hbox (18.77168pt too wide) in paragraph at lines 12384--12384 []\T1/zi4/m/n/9 Rscript --default-packages=methods,datasets,utils,grDevices,gr aphics,stats -e \TS1/zi4/m/n/9 '\T1/zi4/m/n/9 sessionInfo()\TS1/zi4/m/n/9 '[] [2304] [2305] [2306] [2307] Underfull \hbox (badness 2150) in paragraph at lines 12639--12641 [][][]$\T1/zi4/m/sl/10 https : / / en . wikipedia . org / wiki / Ctags$[][]\T1/ ptm/m/n/10 , [][]$\T1/zi4/m/sl/10 https : / / www . gnu . org / software / emac s / manual / [2308] [2309] [2310] [2311] Underfull \hbox (badness 10000) in paragraph at lines 12859--12863 []\T1/ptm/m/n/10 The de-fault for []\T1/zi4/m/sl/10 stylepath []\T1/ptm/m/n/10 is now taken from the en-vi-ron-ment vari-able Underfull \hbox (badness 10000) in paragraph at lines 12892--12898 []\T1/ptm/m/n/10 If you wish to over-ride this de-fault be-hav-ior en-tirely, y ou can add a [2312] Underfull \hbox (badness 2762) in paragraph at lines 12907--12913 \T1/ptm/m/n/10 UTF-8 lo-cales (note that pdf-TeX as-sumes UTF-8 by de-fault sin ce 2018). Ei-ther set [2313] [2314] Underfull \hbox (badness 1009) in paragraph at lines 13082--13094 []\T1/ptm/m/n/10 Before each code chunk is eval-u-ated, zero or more hook func- tions can be ex-e-cuted. If Underfull \hbox (badness 4779) in paragraph at lines 13122--13124 []\T1/ptm/m/n/10 The file `\T1/zi4/m/sl/10 Rconsole\T1/ptm/m/n/10 ' con-fig-ure s the R GUI ([]\T1/zi4/m/sl/10 Rgui[]\T1/ptm/m/n/10 ) con-sole un-der MS Win-do ws and [2315] Underfull \hbox (badness 1077) in paragraph at lines 13152--13159 \T1/ptm/m/n/10 (strip-ping any trail-ing slash), oth-er-wise to the Win-dows `p er-sonal' di-rec-tory, oth-er-wise to [2316] [2317] [2318] [2319] [2320] [2321] Underfull \hbox (badness 3780) in paragraph at lines 13577--13583 []\T1/ptm/m/n/10 A Bio-con-duc-tor mir-ror can be se-lected by set-ting [][][]\ T1/zi4/m/sl/10 options[][][]("BioC_mirror")[]\T1/ptm/m/n/10 , e.g. via [2322] Underfull \hbox (badness 2635) in paragraph at lines 13595--13598 []\T1/ptm/m/n/10 Repository `[]\T1/zi4/m/sl/10 CRAN[]\T1/ptm/m/n/10 ' is treate d spe-cially: the value is taken from the cur-rent set-ting of [2323] [2324] [2325] Underfull \hbox (badness 2302) in paragraph at lines 13805--13807 []\T1/ptm/m/n/10 Convert file paths to the short form. 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one Output written on fullrefman.pdf (2486 pages, 6747853 bytes). Transcript written on fullrefman.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-FAQ.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-FAQ.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) [1{/var/lib/texmf/fonts/map/pdftex/u pdmap/pdftex.map}] [-1] Chapter 1 Chapter 2 [1] Cross reference values unknown; you must run TeX again. [2] Underfull \hbox (badness 10000) in paragraph at lines 255--284 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 612--617 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1751--1751 []@smalltt KernSmooth Functions for Kernel Smoothing Supporting Wand & Jone s (1995)[] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1752--1752 []@smalltt MASS Support Functions and Datasets for Venables and Riple y s MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] Underfull \hbox (badness 10000) in paragraph at lines 3034--3048 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] (Acknowledgments) [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (49 pages, 351611 bytes). Transcript written on R-FAQ.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-FAQ.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) [1{/var/lib/texmf/fonts/map/pdftex/u pdmap/pdftex.map}] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-FAQ.aux) Chapter 2 [1] [2] Underfull \hbox (badness 10000) in paragraph at lines 255--284 @textrm and sparc @reducedrm CPU[]@textrm s (e.g., [][]@texttt https:// buildd . debian. org/ build. php? & pkg=r-base[][]@textrm ), [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 612--617 @textrm (doi: [][]10.1080/10618600.1996.10474713 (@texttt https:// doi. org/ 10. 1080/ 10618600. 1996. [7] [8] [9] Chapter 3 [10] [11] [12] [13] [14] [15] [16] [17] Chapter 4 [18] Chapter 5 [19] [20] [21] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1751--1751 []@smalltt KernSmooth Functions for Kernel Smoothing Supporting Wand & Jone s (1995)[] Overfull \hbox (14.27353pt too wide) in paragraph at lines 1752--1752 []@smalltt MASS Support Functions and Datasets for Venables and Riple y s MASS[] [22] [23] Chapter 6 [24] [25] Chapter 7 [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] Writing index file R-FAQ.fn [38] Underfull \hbox (badness 10000) in paragraph at lines 3034--3048 @textrm and @texttt error.bars.by()[] @textrm func-tions in the [][]@textbf psy ch @textrm (@texttt https:// CRAN. R-project. org/ [39] [40] [41] Chapter 8 [42] Chapter 9 [43] [44] [45] (Acknowledgments) [46] [47] ) (see the transcript file for additional information) Output written on R-FAQ.pdf (51 pages, 368707 bytes). Transcript written on R-FAQ.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-admin.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-admin.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-admin.cp Writing index file R-admin.en [1] Chapter 2 [2] Cross reference values unknown; you must run TeX again. [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Chapter 3 [17] [18] [19] Chapter 4 [20] [21] [22] Chapter 5 [23] Chapter 6 [24] Overfull \hbox (14.94176pt too wide) in paragraph at lines 1880--1880 []@texttt [1] "datasets" "utils" "grDevices" "graphics" "stats" "met hods"[] [25] [26] Underfull \hbox (badness 6842) in paragraph at lines 2104--2112 []@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age s. No ad-di- [27] Overfull \hbox (37.93651pt too wide) in paragraph at lines 2177--2177 []@texttt FLIBS = -L/Library/Frameworks/R.framework/Resources/lib -lgfortran - lquadmath[] [28] [29] [30] [31] [32] [33] Overfull \hbox (20.69044pt too wide) in paragraph at lines 2629--2629 []@texttt R --arch @textttsl arch @texttt CMD check -l @textttsl libdir @textt t --extra-arch --install=check:@textttsl pkg@texttt .log @textttsl pkg[] Chapter 7 [34] [35] [36] Chapter 8 [37] Chapter 9 [38] [39] [40] Appendix A [41] [42] Overfull \hbox (49.43388pt too wide) in paragraph at lines 3200--3200 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [43] [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 3423--3425 []@textrm Library @texttt libdeflate[] @textrm ([][]@texttt https:// github. com/ ebiggers/ libdeflate[][]@textrm ) is used by [46] Overfull \hbox (14.94176pt too wide) in paragraph at lines 3519--3519 []@texttt JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.322.b06-6.fc34.x86_6 4/jre[] [47] [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 10000) in paragraph at lines 4160--4163 []@textrm There is also `Re-cur-sive-LA-PACK' ([][]@texttt https:// github. c om/ HPAC/ ReLAPACK? [55] Appendix B [56] [57] [58] [59] [60] [61] Appendix C [62] [63] [64] [65] Overfull \hbox (14.94176pt too wide) in paragraph at lines 4889--4889 []@texttt -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSER TIONS[] [66] [67] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5083--5083 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] [68] Overfull \hbox (122.85329pt too wide) in paragraph at lines 5172--5172 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/pcre2-10.44-da rwin.20-arm64.tar.xz[] Overfull \hbox (105.60722pt too wide) in paragraph at lines 5174--5174 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/xz-5.6.3-darwi n.20-arm64.tar.xz[] [69] Overfull \hbox (60.93126pt too wide) in paragraph at lines 5302--5302 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin.20 -arm64.tar.gz[] [70] Overfull \hbox (32.18782pt too wide) in paragraph at lines 5309--5309 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin15. 6.tar.gz[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 5339--5339 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (38.79282pt too wide) in paragraph at lines 5348--5349 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][]@smallrm .| [71] [72] [73] Overfull \hbox (72.77429pt too wide) in paragraph at lines 5613--5613 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][]| [74] Overfull \hbox (9.18199pt too wide) in paragraph at lines 1--5650 @texttt OpenMathLib/ OpenBLAS/ releases[][]@textrm ) by sym-link-ing @texttt /opt/OpenBLAS/lib/libopenblas.dylib[] [75] Underfull \hbox (badness 10000) in paragraph at lines 5726--5737 @texttt zulu-community/ ? os=macos& architecture=arm-64-bit& package=jdk[][ ] @textrm and from [76] [77] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5886--5886 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libgfortran.5. dylib \[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5891--5891 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libquadmath.0. dylib \[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 5909--5909 []@texttt PKG_LIBS = /usr/local/llvm/lib/libc++.a /usr/local/llvm/lib/libc++ab i.a[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 5932--5932 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [78] [79] (Function and variable index) [80] No file R-admin.vrs. (Environment variable index) [81] No file R-admin.ens. (Concept index) [82] No file R-admin.cps. [83] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (86 pages, 477370 bytes). Transcript written on R-admin.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-admin.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-admin.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.aux) Writing index file R-admin.cp Writing index file R-admin.en [1] Chapter 2 [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Chapter 3 [17] [18] [19] Chapter 4 [20] [21] [22] Chapter 5 [23] Chapter 6 [24] Overfull \hbox (14.94176pt too wide) in paragraph at lines 1880--1880 []@texttt [1] "datasets" "utils" "grDevices" "graphics" "stats" "met hods"[] [25] [26] Underfull \hbox (badness 6842) in paragraph at lines 2104--2112 []@texttt R CMD INSTALL[] @textrm works in Win-dows to in-stall source pack-age s. No ad-di- [27] Overfull \hbox (37.93651pt too wide) in paragraph at lines 2177--2177 []@texttt FLIBS = -L/Library/Frameworks/R.framework/Resources/lib -lgfortran - lquadmath[] [28] [29] [30] [31] [32] [33] Overfull \hbox (20.69044pt too wide) in paragraph at lines 2629--2629 []@texttt R --arch @textttsl arch @texttt CMD check -l @textttsl libdir @textt t --extra-arch --install=check:@textttsl pkg@texttt .log @textttsl pkg[] Chapter 7 [34] [35] [36] Chapter 8 [37] Chapter 9 [38] [39] [40] Appendix A [41] [42] Overfull \hbox (49.43388pt too wide) in paragraph at lines 3200--3200 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [43] [44] [45] Underfull \hbox (badness 10000) in paragraph at lines 3423--3425 []@textrm Library @texttt libdeflate[] @textrm ([][]@texttt https:// github. com/ ebiggers/ libdeflate[][]@textrm ) is used by [46] Overfull \hbox (14.94176pt too wide) in paragraph at lines 3519--3519 []@texttt JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.322.b06-6.fc34.x86_6 4/jre[] [47] [48] [49] [50] [51] [52] [53] [54] Underfull \hbox (badness 10000) in paragraph at lines 4160--4163 []@textrm There is also `Re-cur-sive-LA-PACK' ([][]@texttt https:// github. c om/ HPAC/ ReLAPACK? [55] Appendix B [56] [57] [58] [59] [60] [61] Appendix C [62] [63] [64] [65] Overfull \hbox (14.94176pt too wide) in paragraph at lines 4889--4889 []@texttt -Werror=format-security -Wp,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSER TIONS[] [66] [67] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5083--5083 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] [68] Overfull \hbox (122.85329pt too wide) in paragraph at lines 5172--5172 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/pcre2-10.44-da rwin.20-arm64.tar.xz[] Overfull \hbox (105.60722pt too wide) in paragraph at lines 5174--5174 []@texttt curl -OL https://mac.r-project.org/bin/darwin20/arm64/xz-5.6.3-darwi n.20-arm64.tar.xz[] l.5228: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5228: Undefined cross reference ` Tcl/Tk headers and libraries-snt'. l.5228: Undefined cross reference ` Tcl/Tk headers and libraries-pg'. [69] Overfull \hbox (60.93126pt too wide) in paragraph at lines 5302--5302 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin.20 -arm64.tar.gz[] Overfull \hbox (32.18782pt too wide) in paragraph at lines 5309--5309 []@texttt curl -OL https://mac.r-project.org/tools/subversion-1.14.3-darwin15. 6.tar.gz[] [70] Overfull \hbox (170.15633pt too wide) in paragraph at lines 5339--5339 [] @texttt could not create compact unwind for _arcoef_: registers 23 and 24 not saved contiguously in frame[] Overfull \hbox (38.79282pt too wide) in paragraph at lines 5348--5349 [][][]@smallrm See [][]@smalltt https:// developer. apple. com/ documentati on/ xcode/ notarizing_macos_software_before_distribution[][]@smallrm .| [71] [72] [73] Overfull \hbox (72.77429pt too wide) in paragraph at lines 5613--5613 [][][][][]@smalltt https:// cran. r-project. org/ bin/ macosx/ RMacOSX-FA Q. html# Which-BLAS-is-used-and-how-can-it-be-changed_003f[][]| [74] Overfull \hbox (9.18199pt too wide) in paragraph at lines 1--5650 @texttt OpenMathLib/ OpenBLAS/ releases[][]@textrm ) by sym-link-ing @texttt /opt/OpenBLAS/lib/libopenblas.dylib[] [75] Underfull \hbox (badness 10000) in paragraph at lines 5726--5737 @texttt zulu-community/ ? os=macos& architecture=arm-64-bit& package=jdk[][ ] @textrm and from [76] [77] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5886--5886 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libgfortran.5. dylib \[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5891--5891 []@texttt /opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0/libquadmath.0. dylib \[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 5909--5909 []@texttt PKG_LIBS = /usr/local/llvm/lib/libc++.a /usr/local/llvm/lib/libc++ab i.a[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 5932--5932 []@texttt FC="/opt//gfortran/bin/gfortran -arch x86_64 -mtune=native -mmacosx- version-min=11"[] [78] [79] (Function and variable index) [80] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.vrs) (Environment variable index) [81] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.ens) (Concept index) [82] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-admin.cps) [83] ) (see the transcript file for additional information) pdfTeX warning (dest): name{\040Tcl/Tk\040headers\040and\040libraries} has been referenced but does not exist, replaced by a fixed one Output written on R-admin.pdf (88 pages, 520179 bytes). Transcript written on R-admin.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-data.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) [1] Chapter 1 [2] Writing index file R-data.cp Cross reference values unknown; you must run TeX again. [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 425--428 []@textrm Function @texttt write.matrix[] @textrm in pack-age [][]@textbf MASS @textrm (@texttt https:// CRAN. R-project. org/ Underfull \hbox (badness 10000) in paragraph at lines 436--440 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1203--1215 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1761--1767 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] No file R-data.vrs. (Concept index) [34] No file R-data.cps. [35] ) (see the transcript file for additional information) Output written on R-data.pdf (38 pages, 266610 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc [-1]) [-2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.aux ) [1] Chapter 1 [2] Writing index file R-data.cp [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 425--428 []@textrm Function @texttt write.matrix[] @textrm in pack-age [][]@textbf MASS @textrm (@texttt https:// CRAN. R-project. org/ Underfull \hbox (badness 10000) in paragraph at lines 436--440 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1203--1215 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1761--1767 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.vrs [34]) (Concept index) [35] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.cps) [36] [37] ) (see the transcript file for additional information) Output written on R-data.pdf (41 pages, 302828 bytes). Transcript written on R-data.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-data.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-data.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc [-1]) [-2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.aux ) [1] Chapter 1 [2] Writing index file R-data.cp [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 425--428 []@textrm Function @texttt write.matrix[] @textrm in pack-age [][]@textbf MASS @textrm (@texttt https:// CRAN. R-project. org/ Underfull \hbox (badness 10000) in paragraph at lines 436--440 []@textrm Function @texttt write.foreign[] @textrm in pack-age [][]@textbf fore ign @textrm (@texttt https:// CRAN. R-project. org/ [6] Chapter 2 [7] [8] [9] [10] [11] [12] [13] Chapter 3 [14] [15] Chapter 4 [16] Underfull \hbox (badness 10000) in paragraph at lines 1203--1215 @textrm (@texttt https:// www. ibm. com/ products/ informix[]@textrm )[]; [][]Oracle (@texttt https:// www. oracle. com[]@textrm )[]; [17] [18] [19] [20] [21] [22] Chapter 5 [23] Underfull \hbox (badness 10000) in paragraph at lines 1761--1767 []@textrm Packages [][]@textbf h5 @textrm (@texttt https:// CRAN. R-project. org/ package=h5[]@textrm )[], Bio-con-duc-tor's @textbf rhdf5@textrm , Chapter 6 [24] Chapter 7 [25] [26] [27] [28] [29] Chapter 8 [30] Chapter 9 [31] (References) [32] (Function and variable index) [33] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.vrs [34]) (Concept index) [35] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-data.cps) [36] [37] ) (see the transcript file for additional information) Output written on R-data.pdf (41 pages, 302838 bytes). Transcript written on R-data.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-exts.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Acknowledgements) Chapter 1 [1] Writing index file R-exts.cp Cross reference values unknown; you must run TeX again. [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1644--1651 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2051--2051 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2276--2276 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2683--2683 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2685--2685 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2824--2824 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3020--3026 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3334--3334 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4700--4700 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4929--4929 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4948--4948 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5422--5422 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5424--5424 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5425--5425 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5440--5440 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [71] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5820--5820 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5987--5990 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6073--6073 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [80] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6218--6218 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6283--6283 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6360--6360 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6372--6372 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6387--6387 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap [84] Underfull \hbox (badness 10000) in paragraph at lines 6440--6441 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6931--6931 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] Chapter 2 [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] Underfull \hbox (badness 10000) in paragraph at lines 8185--8192 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [107] [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 8401--8406 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [110] [111] [112] Chapter 3 [113] [114] [115] [116] [117] [118] [119] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9155--9155 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [120] Chapter 4 [121] [122] [123] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9422--9422 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [124] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9463--9463 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [125] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9567--9567 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9597--9606 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 9858--9863 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9856--9869 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9873--9874 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [130] [131] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10022--10022 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10048--10051 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10061--10064 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [132] [133] Underfull \hbox (badness 10000) in paragraph at lines 10160--10164 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10176--10176 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10177--10177 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10180--10180 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10188--10188 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10232--10236 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [134] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10255--10255 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10300--10300 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10303--10303 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [135] [136] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10382--10382 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [137] [138] [139] Underfull \hbox (badness 10000) in paragraph at lines 10617--10619 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [140] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10673--10673 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10692--10692 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10703--10703 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10723--10723 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10732--10732 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10733--10733 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [141] Chapter 5 [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11535--11535 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11599--11599 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [153] [154] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11765--11765 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [155] [156] [157] [158] [159] [160] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12205--12205 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [161] [162] [163] [164] [165] [166] [167] [168] [169] Writing index file R-exts.ae [170] [171] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13098--13098 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13167--13167 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [173] [174] Underfull \hbox (badness 7576) in paragraph at lines 13398--13406 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [175] [176] [177] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13678--13678 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [178] [179] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13846--13846 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13874--13874 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [180] [181] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13986--13986 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [182] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14110--14110 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14117--14117 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14118--14118 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14172--14172 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14185--14185 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14186--14186 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14286--14286 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [186] [187] [188] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14461--14461 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14553--14553 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [190] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14679--14679 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [191] [192] Chapter 6 [193] [194] [195] [196] Writing index file R-exts.for [197] [198] [199] [200] [201] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15677--15677 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] Underfull \hbox (badness 10000) in paragraph at lines 15695--15700 @texttt com/ content/ www/ us/ en/ docs/ fortran-compiler/ developer-gui de-reference/ [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 16506--16510 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [213] [214] [215] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16734--16734 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16741--16741 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16770--16770 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] Chapter 7 [227] [228] Chapter 8 [229] [230] Writing index file R-exts.em [231] Overfull \hbox (43.6852pt too wide) in paragraph at lines 17964--17964 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [232] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18007--18007 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18022--18022 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [233] [234] [235] [236] [237] [238] [239] [240] [241] (Function and variable index) [242] No file R-exts.vrs. (API index) [243] No file R-exts.aps. (Fortran API index) [244] No file R-exts.fors. (Experimental API index) [245] No file R-exts.aes. (Embedding API index) [246] No file R-exts.ems. (Concept index) [247] No file R-exts.cps. [248] ) (see the transcript file for additional information) Output written on R-exts.pdf (251 pages, 1034530 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc [-1] [-2] [-3] [-4]) [-5] [-6] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aux ) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1644--1651 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2051--2051 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2276--2276 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2683--2683 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2685--2685 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2824--2824 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3020--3026 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3334--3334 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4700--4700 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4929--4929 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4948--4948 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5422--5422 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5424--5424 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5425--5425 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5440--5440 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [71] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5820--5820 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5987--5990 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6073--6073 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [80] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6218--6218 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6283--6283 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6360--6360 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6372--6372 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6387--6387 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap [84] Underfull \hbox (badness 10000) in paragraph at lines 6440--6441 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6931--6931 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] Chapter 2 [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] Underfull \hbox (badness 10000) in paragraph at lines 8185--8192 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [107] [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 8401--8406 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [110] [111] [112] Chapter 3 [113] [114] [115] [116] [117] [118] [119] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9155--9155 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [120] Chapter 4 [121] [122] [123] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9422--9422 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [124] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9463--9463 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [125] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9567--9567 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9597--9606 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 9858--9863 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9856--9869 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9873--9874 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [130] [131] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10022--10022 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10048--10051 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10061--10064 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [132] [133] Underfull \hbox (badness 10000) in paragraph at lines 10160--10164 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10176--10176 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10177--10177 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10180--10180 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10188--10188 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10232--10236 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [134] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10255--10255 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10300--10300 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10303--10303 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [135] [136] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10382--10382 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [137] [138] [139] Underfull \hbox (badness 10000) in paragraph at lines 10617--10619 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [140] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10673--10673 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10692--10692 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10703--10703 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10723--10723 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10732--10732 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10733--10733 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [141] Chapter 5 [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11535--11535 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11599--11599 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [153] [154] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11765--11765 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [155] [156] [157] [158] [159] [160] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12205--12205 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [161] [162] [163] [164] [165] [166] [167] [168] [169] Writing index file R-exts.ae [170] [171] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13098--13098 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13167--13167 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [173] [174] Underfull \hbox (badness 7576) in paragraph at lines 13398--13406 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [175] [176] [177] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13678--13678 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [178] [179] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13846--13846 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13874--13874 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [180] [181] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13986--13986 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [182] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14110--14110 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14117--14117 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14118--14118 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14172--14172 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14185--14185 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14186--14186 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14286--14286 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [186] [187] [188] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14461--14461 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14553--14553 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [190] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14679--14679 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [191] [192] Chapter 6 [193] [194] [195] [196] Writing index file R-exts.for [197] [198] [199] [200] [201] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15677--15677 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] Underfull \hbox (badness 10000) in paragraph at lines 15695--15700 @texttt com/ content/ www/ us/ en/ docs/ fortran-compiler/ developer-gui de-reference/ [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 16506--16510 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [213] [214] [215] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16734--16734 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16741--16741 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16770--16770 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] Chapter 7 [227] [228] Chapter 8 [229] [230] Writing index file R-exts.em [231] Overfull \hbox (43.6852pt too wide) in paragraph at lines 17964--17964 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [232] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18007--18007 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18022--18022 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [233] [234] [235] [236] [237] [238] [239] [240] [241] (Function and variable index) [242] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.vrs [243] [244] [245] [246] [247] [248]) (API index) [249] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aps [250] [251] [252]) (Fortran API index) [253] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.fors) (Experimental API index) [254] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aes [255]) (Embedding API index) [256] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.ems) (Concept index) [257] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.cps [258]) [259] ) (see the transcript file for additional information) Output written on R-exts.pdf (267 pages, 1134748 bytes). Transcript written on R-exts.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-exts.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-exts.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc [-1] [-2] [-3] [-4]) [-5] [-6] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.toc) (Acknowledgements) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aux ) Chapter 1 [1] Writing index file R-exts.cp [2] [3] [4] [5] [6] Underfull \hbox (badness 10000) in paragraph at lines 513--516 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] Underfull \hbox (badness 10000) in paragraph at lines 1324--1325 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1325--1326 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1328--1330 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1330--1332 @texttt ~/.R/Makevars.win64[]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 1338--1339 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1339--1340 @texttt R_MAKEVARS_SITE[]@textrm , @textttsl R_HOME@texttt /etc/@textttsl R_ Underfull \hbox (badness 10000) in paragraph at lines 1342--1344 @texttt R_MAKEVARS_USER[]@textrm , @texttt ~/.R/Makevars- Underfull \hbox (badness 10000) in paragraph at lines 1344--1346 @texttt ~/.R/Makevars.win64[]@textrm , [17] [18] [19] [20] Overfull \hbox (95.42339pt too wide) in paragraph at lines 1611--1611 [] @texttt "--no-libs", "--no-help", "--no-demo", "--no-exec" , "--no-test-load")[] Overfull \hbox (72.42863pt too wide) in paragraph at lines 1612--1612 [] @texttt install.packages(pkg, lib, INSTALL_opts = opts, repos = NULL , quiet = TRUE)[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 1613--1613 [] @texttt res[z] <- file.size(file.path(lib, pkg_name, "data", "Rdata. rdb"))[] [21] Underfull \hbox (badness 10000) in paragraph at lines 1644--1651 @texttt org/ package=amap[]@textrm )[]), Python or Tcl ([][]@textbf Simile @te xtrm (@texttt https:// CRAN. R-project. org/ [22] [23] [24] [25] [26] Overfull \hbox (32.18782pt too wide) in paragraph at lines 2051--2051 []@texttt $ pkg-config --exists libtiff-4 >= 4.1.0 --print-errors # check the status[] [27] [28] [29] Overfull \hbox (14.94176pt too wide) in paragraph at lines 2276--2276 []@texttt SLAMC_FFLAGS=$(R_XTRA_FFLAGS) $(FPICFLAGS) $(SHLIB_FFLAGS) $(SAFE_FF LAGS)[] [30] [31] [32] [33] [34] Overfull \hbox (67.78206pt too wide) in paragraph at lines 2683--2683 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (53.60722pt too wide) in paragraph at lines 2685--2685 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [35] [36] Overfull \hbox (16.92342pt too wide) in paragraph at lines 2824--2824 []@smalltt dnl for 64-bit ODBC need SQL[U]LEN, and it is unclear where they ar e defined.[] [37] [38] [39] Underfull \hbox (badness 7221) in paragraph at lines 3020--3026 [][][]@smallrm See [][]@smalltt https:// isocpp. org/ std/ standing-documen ts/ sd-6-sg10-feature-test-recommendations[][] @smallrm or [40] Overfull \hbox (60.93126pt too wide) in paragraph at lines 3097--3097 [] @texttt CXX="$(CXX17) $(CXX17STD)" CXXFLAGS="$(CXX17FLAGS) $(CXX 17PICFLAGS)")[] [41] [42] [43] Overfull \hbox (43.6852pt too wide) in paragraph at lines 3334--3334 []@texttt if test -z "$CMAKE"; then CMAKE=/Applications/CMake.app/Contents/bin /cmake; fi[] [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] [54] [55] [56] [57] [58] [59] [60] [61] Overfull \hbox (20.69044pt too wide) in paragraph at lines 4700--4700 []@texttt importFrom("stats", approx, optim, pchisq, predict, qchisq, qnorm, s pline)[] [62] [63] [64] Overfull \hbox (81.29893pt too wide) in paragraph at lines 4929--4929 [] @texttt CXX="$(CXX)" CXXFLAGS="$(CXXFLAGS) $(CXXPICFLAGS) $(C_VISIB ILITY)" \[] Overfull \hbox (59.61772pt too wide) in paragraph at lines 4948--4948 []@texttt CXXFLAGS = ^^R"${RBIN}" CMD config CXXFLAGS^^R ^^R"${RBIN}" CMD conf ig CXXPICFLAGS^^R[] [65] [66] [67] [68] [69] [70] Overfull \hbox (53.86903pt too wide) in paragraph at lines 5422--5422 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (48.12035pt too wide) in paragraph at lines 5424--5424 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (65.36641pt too wide) in paragraph at lines 5425--5425 [] @texttt if(jvn < 1.8) stop("Java >= 8 is needed for this package but not a vailable")[] Overfull \hbox (76.86378pt too wide) in paragraph at lines 5440--5440 []@texttt java.lang.UnsupportedClassVersionError: ... Unsupported major.minor version 52.0[] [71] [72] [73] [74] [75] [76] Overfull \hbox (14.94176pt too wide) in paragraph at lines 5820--5820 []@texttt "latin1=en_US:latin2=pl_PL:UTF-8=en_US.UTF-8:latin9=fr_FR.iso885915@ euro"[] [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 5987--5990 @texttt gcc/ C-Extensions. html[][] @textrm and [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc/ [79] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6073--6073 []@texttt abs acos atan bind calloc ceil div exp fabs floor fmod free log mall oc[] [80] [81] Overfull \hbox (53.86903pt too wide) in paragraph at lines 6218--6218 []@texttt register storage class specifier is deprecated and incompatible with C++17[] [82] Overfull \hbox (13.62822pt too wide) in paragraph at lines 6283--6283 []@texttt #if defined (__unix__) || (defined (__APPLE__) && defined (__MACH__) )[] [83] Overfull \hbox (48.12035pt too wide) in paragraph at lines 6360--6360 []@texttt !DEC$ ATTRIBUTES DLLEXPORT,C,REFERENCE,ALIAS: kdenestmlcvb :: kdenestmlcvb[] Overfull \hbox (25.1256pt too wide) in paragraph at lines 6372--6372 []@texttt warning: argument 1 value 18446744073709551615 exceeds maximum object[] Overfull \hbox (111.35591pt too wide) in paragraph at lines 6387--6387 [] @texttt Rf_error("Actual: %0.f; Expected %0.f\n", (double) XLENGTH(Robj) , (double) nelem);[] Writing index file R-exts.ap [84] Underfull \hbox (badness 10000) in paragraph at lines 6440--6441 [][][]@smallrm See [][]@smalltt https:// prereleases. llvm. org/ 11. 0. 0 / rc2/ tools/ clang/ docs/ ReleaseNotes. html# [85] [86] [87] [88] [89] [90] Overfull \hbox (19.3769pt too wide) in paragraph at lines 6931--6931 []@texttt #define dngettext(pkg, String, StringP, N) (N == 1 ? String : String P)[] [91] [92] Chapter 2 [93] [94] [95] [96] [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] Underfull \hbox (badness 10000) in paragraph at lines 8185--8192 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and [107] [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 8401--8406 []@texttt echo=FALSE[] @textrm Whether the R code should be echoed. If @texttt TRUE[] @textit and [110] [111] [112] Chapter 3 [113] [114] [115] [116] [117] [118] [119] Overfull \hbox (43.6852pt too wide) in paragraph at lines 9155--9155 []@texttt 5497 1.9783 R findVarLocInFrame.part.0. lto_priv.0[] [120] Chapter 4 [121] [122] [123] Overfull \hbox (14.94176pt too wide) in paragraph at lines 9422--9422 []@texttt evaluation nested too deeply: infinite recursion / options(expressio ns=)?[] [124] Overfull \hbox (25.25755pt too wide) in paragraph at lines 9463--9463 []@smalltt Message: Error: no valid set of coefficients has been found: pleas e supply starting values[] [125] Overfull \hbox (20.53261pt too wide) in paragraph at lines 9567--9567 []@smalltt debugging in: glm.fit(x = X, y = Y, weights = weights, start = star t, etastart = etastart,[] Overfull \hbox (38.96663pt too wide) in paragraph at lines 9597--9606 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. @texttt debug(stats:::predict.Arima)[]@textrm . [126] [127] [128] [129] Underfull \hbox (badness 10000) in paragraph at lines 9858--9863 @smalltt developer. apple. com/ documentation/ xcode/ diagnosing-memory-th read-and-crash-issues-early[][]@smallrm . Underfull \hbox (badness 10000) in paragraph at lines 9856--9869 @texttt controlling-code-generation[][]@textrm , [][]@texttt https:// clang. llvm. org/ docs/ AddressSanitizer. Overfull \hbox (48.90796pt too wide) in paragraph at lines 9873--9874 [][][]@smallrm see [][]@smalltt https:// llvm. org/ devmtg/ 2014-04/ PDFs/ LightningTalks/ EuroLLVM%202014%20--%20container%20overflow. [130] [131] Overfull \hbox (78.17732pt too wide) in paragraph at lines 10022--10022 []@texttt setenv ASAN_OPTIONS alloc_dealloc_mismatch=0:detect_leaks=0:detect_odr_violation=0 [] Overfull \hbox (32.81921pt too wide) in paragraph at lines 10048--10051 [][]@smalltt https:// developer. apple. com/ documentation/ xcode/ diagno sing-memory-thread-and-crash-issues-early[][]@smallrm .| Overfull \hbox (33.15736pt too wide) in paragraph at lines 10061--10064 []@textrm This san-i-tizer may be com-bined with the Ad-dress San-i-tizer by @t exttt -fsanitize=undefined,address[] [132] [133] Underfull \hbox (badness 10000) in paragraph at lines 10160--10164 [][]@texttt https:// blog. llvm. org/ 2011/ 05/ what-every-c-programmer-s hould-know. html[][] Overfull \hbox (112.66945pt too wide) in paragraph at lines 10176--10176 []@texttt CC = clang -fsanitize=undefined -fno-sanitize=float-divide-by-zero - fno-omit-frame-pointer[] Overfull \hbox (170.15633pt too wide) in paragraph at lines 10177--10177 []@texttt CXX = clang++ -fsanitize=undefined -fno-sanitize=float-divide-by-zer o -fno-omit-frame-pointer -frtti[] Overfull \hbox (181.6537pt too wide) in paragraph at lines 10180--10180 []@texttt SAN_LIBS = $(UBSAN_DIR)/libclang_rt.ubsan_standalone.a $(UBSAN_DIR)/ libclang_rt.ubsan_standalone_cxx.a[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 10188--10188 []@texttt SAN_LIBS = -L$(UBSAN_DIR) -Wl,-rpath,$(UBSAN_DIR) -lclang_rt.ubsan_s tandalone[] Overfull \hbox (2.03816pt too wide) in paragraph at lines 10232--10236 []@textrm See [][]@texttt https:// gcc. gnu. org/ onlinedocs/ gcc-10. 1. 0/ gcc/ Static-Analyzer-Options. [134] Overfull \hbox (72.42863pt too wide) in paragraph at lines 10255--10255 []@texttt Fortran runtime error: Index 1 of dimension 1 of array x above upper bound of 0[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10300--10300 [] @texttt 2: possibleExtends(class(sloti), classi, ClassDef2 = getClassDef(cl assi,[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10303--10303 [] @texttt 4: stopifnot(validObject(cu <- as(tu, "dtCMatrix")), validObject(t( cu)),[] [135] [136] Overfull \hbox (26.43913pt too wide) in paragraph at lines 10382--10382 []@texttt #5 0xb7d6c0a5 in do_random2 (call=0x94bf7d4, op=0x92580e8, args=0x9 698f98,[] [137] [138] [139] Underfull \hbox (badness 10000) in paragraph at lines 10617--10619 [][][]@smallrm See [][]@smalltt https:// svn. r-project. org/ R-dev-web/ t runk/ CRAN/ QA/ Simon/ R-build/ fixpathR[][]@smallrm : [140] Overfull \hbox (124.16682pt too wide) in paragraph at lines 10673--10673 []@texttt boot.f:61: warning: type of ddot does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (147.16158pt too wide) in paragraph at lines 10692--10692 []@texttt rkpk2.f:77:5: warning: type of dstup does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (141.41289pt too wide) in paragraph at lines 10703--10703 []@texttt reg.f:78:33: warning: type of dqrdc does not match original declaration [-Wlto-type-mismatch][] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10723--10723 [] @tex ttt 1[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 10732--10732 [] @tex ttt 1[] Overfull \hbox (43.6852pt too wide) in paragraph at lines 10733--10733 []@texttt Warning: Type mismatch in argument jpvt at (1); passed REAL(8) to INTEGER(4)[] [141] Chapter 5 [142] [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] Overfull \hbox (30.87428pt too wide) in paragraph at lines 11535--11535 [] @texttt double *w, int *iper, double *span, double *al pha,[] Overfull \hbox (51.66371pt too wide) in paragraph at lines 11599--11599 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [153] [154] Overfull \hbox (60.93126pt too wide) in paragraph at lines 11765--11765 [] @texttt na_omit_xts_func fun = (na_omit_xts_func) R_GetCCallable("xts", "n a_omit_xts");[] [155] [156] [157] [158] [159] [160] Overfull \hbox (37.93651pt too wide) in paragraph at lines 12205--12205 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [161] [162] [163] [164] [165] [166] [167] [168] [169] Writing index file R-exts.ae [170] [171] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13098--13098 [] @texttt Rf_error("value is not a numeric vector with at least one el ement");[] [172] Overfull \hbox (32.18782pt too wide) in paragraph at lines 13167--13167 [] @texttt if(ign == NA_LOGICAL) Rf_error(" ignore_quotes must be TRUE or FALSE");[] [173] [174] Underfull \hbox (badness 7576) in paragraph at lines 13398--13406 []@textrm Some con-ve-nience func-tions for work-ing with pairlist ob-jects in- clude @texttt Rf_ [175] [176] [177] Overfull \hbox (49.43388pt too wide) in paragraph at lines 13678--13678 [] @texttt Rf_isNull(TAG(args)) ? "" : Rf_translateChar(PRINTNAME(T AG(args)));[] [178] [179] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13846--13846 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] Overfull \hbox (20.69044pt too wide) in paragraph at lines 13874--13874 [] @texttt if(!Rf_isEnvironment(rho)) Rf_error(" rho should be an environment");[] [180] [181] Overfull \hbox (14.94176pt too wide) in paragraph at lines 13986--13986 [] @texttt // a version with (too) much PROTECT()ion .. "better safe than s orry"[] [182] [183] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14110--14110 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14117--14117 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14118--14118 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [184] Overfull \hbox (32.18782pt too wide) in paragraph at lines 14172--14172 [] @texttt gradient = PROTECT(Rf_allocMatrix(REALSXP, LENGTH(ans), LENGTH(t heta)));[] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14185--14185 [] @texttt for(i = 0, start = 0; i < LENGTH(theta); i++, start += LENGTH(an s)) {[] Overfull \hbox (37.93651pt too wide) in paragraph at lines 14186--14186 [] @texttt par = PROTECT(Rf_findVar(Rf_installChar(STRING_ELT(theta, i) ), rho));[] [185] Overfull \hbox (26.43913pt too wide) in paragraph at lines 14286--14286 [] @texttt cmdexpr = PROTECT(R_ParseVector(cmdSexp, -1, &status, R_NilV alue));[] [186] [187] [188] Overfull \hbox (14.94176pt too wide) in paragraph at lines 14461--14461 []@texttt void R_RegisterCFinalizerEx(SEXP s, R_CFinalizer_t fun, Rboolean one xit);[] [189] Overfull \hbox (60.93126pt too wide) in paragraph at lines 14553--14553 [] @texttt ptr = R_MakeExternalPtr(thisHandle, Rf_install("RODBC_channel"), R_NilValue);[] [190] Overfull \hbox (72.42863pt too wide) in paragraph at lines 14679--14679 []@texttt typedef enum {CE_NATIVE, CE_UTF8, CE_LATIN1, CE_BYTES, CE_SYMBOL, CE _ANY} cetype_t;[] [191] [192] Chapter 6 [193] [194] [195] [196] Writing index file R-exts.for [197] [198] [199] [200] [201] [202] Overfull \hbox (20.69044pt too wide) in paragraph at lines 15677--15677 [] @texttt call cmsg(msg//c_null_char) ! need to concatenate a nul term inator[] Underfull \hbox (badness 10000) in paragraph at lines 15695--15700 @texttt com/ content/ www/ us/ en/ docs/ fortran-compiler/ developer-gui de-reference/ [203] [204] [205] [206] [207] [208] [209] [210] [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 16506--16510 []@texttt R_orderVector()[] @textrm cor-re-sponds to R's @texttt order(..., na .last, decreasing)[]@textrm . [213] [214] [215] Overfull \hbox (14.94176pt too wide) in paragraph at lines 16734--16734 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata), void *hd ata);[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 16741--16741 [] @texttt SEXP (*hndlr)(SEXP cond, void *hdata) , void *hdata)[] Overfull \hbox (26.43913pt too wide) in paragraph at lines 16770--16770 [] @texttt void (*clean)(void *data, Rboolean jump), void *cdata,[] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] Chapter 7 [227] [228] Chapter 8 [229] [230] Writing index file R-exts.em [231] Overfull \hbox (43.6852pt too wide) in paragraph at lines 17964--17964 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was built with a s tatic libR[] [232] Overfull \hbox (20.69044pt too wide) in paragraph at lines 18007--18007 []@texttt extern int (*ptr_R_ReadConsole)(const char *, unsigned char *, int, int);[] Overfull \hbox (55.18257pt too wide) in paragraph at lines 18022--18022 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [233] [234] [235] [236] [237] [238] [239] [240] [241] (Function and variable index) [242] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.vrs [243] [244] [245] [246] [247] [248]) (API index) [249] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aps [250] [251] [252]) (Fortran API index) [253] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.fors) (Experimental API index) [254] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.aes [255]) (Embedding API index) [256] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.ems) (Concept index) [257] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-exts.cps [258]) [259] ) (see the transcript file for additional information) Output written on R-exts.pdf (267 pages, 1134563 bytes). Transcript written on R-exts.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-intro.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] (Preface) Cross reference values unknown; you must run TeX again. Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4726--4728 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] Underfull \hbox (badness 10000) in paragraph at lines 5139--5149 [][]@textbf Mixed mod-els. @textrm The rec-om-mended [][]@textbf nlme @textrm (@texttt https:// CRAN. R-project. org/ [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5603--5603 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6298--6303 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6493--6498 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] No file R-intro.vrs. (Concept index) [103] No file R-intro.cps. [104] ) (see the transcript file for additional information) Output written on R-intro.pdf (107 pages, 573034 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (Preface) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4726--4728 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] Underfull \hbox (badness 10000) in paragraph at lines 5139--5149 [][]@textbf Mixed mod-els. @textrm The rec-om-mended [][]@textbf nlme @textrm (@texttt https:// CRAN. R-project. org/ [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5603--5603 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6298--6303 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6493--6498 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.vrs [103] [104]) (Concept index) [105] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.cps [106]) [107] ) (see the transcript file for additional information) Output written on R-intro.pdf (113 pages, 624704 bytes). Transcript written on R-intro.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-intro.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-intro.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc [-1] [-2] [-3]) [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.toc) (Preface) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.aux) Chapter 1 [1] Writing index file R-intro.cp [2] [3] [4] [5] Chapter 2 [6] [7] [8] [9] [10] [11] [12] Chapter 3 [13] [14] [15] Chapter 4 [16] [17] Chapter 5 [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] Chapter 6 [28] [29] [30] [31] Chapter 7 [32] [33] [34] Chapter 8 [35] [36] [37] [38] [39] [40] [41] Chapter 9 [42] [43] Chapter 10 [44] [45] [46] [47] [48] [49] [50] [51] [52] [53] Chapter 11 [54] [55] [56] [57] [58] [59] [60] Underfull \hbox (badness 10000) in paragraph at lines 4726--4728 @texttt logit[]@textrm , @texttt probit[]@textrm , @texttt cloglog[]@textrm , @texttt identity[]@textrm , [61] [62] [63] [64] [65] Underfull \hbox (badness 10000) in paragraph at lines 5139--5149 [][]@textbf Mixed mod-els. @textrm The rec-om-mended [][]@textbf nlme @textrm (@texttt https:// CRAN. R-project. org/ [66] Chapter 12 [67] [68] [69] [70] [71] Overfull \hbox (26.43913pt too wide) in paragraph at lines 5603--5603 []@texttt > text(x, y, expression(paste(bgroup("(", atop(n, x), ")"), p^x, q^{ n-x})))[] [72] [73] [74] [75] [76] [77] [78] [79] [80] [81] Chapter 13 [82] Underfull \hbox (badness 10000) in paragraph at lines 6298--6303 []@textrm Users con-nected to the In-ter-net can use the @texttt install.packag es()[] @textrm and [83] Chapter 14 [84] [85] Underfull \hbox (badness 10000) in paragraph at lines 6493--6498 []@textrm Windows' UNC filepaths (such as @texttt \\server\dir1\dir2\file[] @t extrm and [86] Appendix A [87] [88] [89] [90] Appendix B [91] [92] [93] [94] [95] [96] [97] [98] Appendix C [99] [100] (References) [101] (Function and variable index) [102] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.vrs [103] [104]) (Concept index) [105] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-intro.cps [106]) [107] ) (see the transcript file for additional information) Output written on R-intro.pdf (113 pages, 624699 bytes). Transcript written on R-intro.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-ints.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3041--3047 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl ib[]@textrm , [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] [72] (Function and variable index) [73] [74] No file R-ints.vrs. (Concept index) [75] No file R-ints.cps. [76] ) (see the transcript file for additional information) Output written on R-ints.pdf (79 pages, 422153 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3041--3047 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl ib[]@textrm , [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] [72] (Function and variable index) [73] [74] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.vrs [75] [76]) (Concept index) [77] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.cps) [78] ) (see the transcript file for additional information) Output written on R-ints.pdf (83 pages, 470788 bytes). Transcript written on R-ints.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-ints.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-ints.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc [-1] [-2]) [-3] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.aux) Writing index file R-ints.cp [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] Overfull \hbox (49.43388pt too wide) in paragraph at lines 1444--1444 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (78.17732pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (66.67995pt too wide) in paragraph at lines 1446--1446 [] @texttt length(meth.Ops <- nM$^^R.__T__Ops:base^^R) # 71 methods for the Ops (group)generic[] Overfull \hbox (158.65895pt too wide) in paragraph at lines 1447--1447 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [19] [20] [21] [22] [23] [24] Chapter 2 [25] Overfull \hbox (26.43913pt too wide) in paragraph at lines 1953--1953 [] @texttt if (!is.character(x)) x <- structure(as.character(x), names = na mes(x))[] [26] [27] [28] [29] Chapter 3 [30] [31] Chapter 4 [32] [33] Chapter 5 [34] Chapter 6 [35] [36] [37] [38] [39] [40] Underfull \hbox (badness 10000) in paragraph at lines 3041--3047 []@textrm The @texttt glyphs[] @textrm com-po-nent re-ports whether ren-der-in g glyphs (e.g., via [41] [42] [43] [44] [45] [46] [47] [48] Chapter 7 [49] Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @textrm it uses @texttt /Library/Frameworks/R.framework/R[]@textrm . This is a sym-bolic link, Underfull \hbox (badness 10000) in paragraph at lines 3697--3706 @texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib/libR.dyl ib[]@textrm , [50] Overfull \hbox (16.81319pt too wide) in paragraph at lines 3748--3752 []@textrm The de-fault path for a per-sonal li-brary di-rec-tory is set as @te xttt ~/Library/R/arch/x.y/library[]@textrm . Chapter 8 [51] [52] [53] [54] [55] Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 []@textrm A string with comma-separated @textttsl name@texttt =@textttsl value [] @textrm pairs (with @textsl value[] @textrm a Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm log-i-cal con-stant) giv-ing ad-di-tional ar-gu-ments for the [][]@tex tbf codetools Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm (@texttt https:// CRAN. R-project. org/ package=codetools[]@textrm )[] func-tions used Underfull \hbox (badness 10000) in paragraph at lines 4086--4094 @textrm to us-ing @texttt skipWith = TRUE[]@textrm , @texttt suppressPartialMa tchArgs = FALSE[] @textrm and [56] [57] [58] [59] [60] [61] Underfull \hbox (badness 10000) in paragraph at lines 4458--4463 @texttt blog. r-project. org/ 2022/ 04/ 08/ enhancements-to-html-documen tation/ [62] [63] [64] [65] [66] Chapter 9 [67] [68] Chapter 10 [69] Chapter 11 [70] Chapter 12 [71] [72] (Function and variable index) [73] [74] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.vrs [75] [76]) (Concept index) [77] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-ints.cps) [78] ) (see the transcript file for additional information) Output written on R-ints.pdf (83 pages, 470782 bytes). Transcript written on R-ints.log. TEXINPUTS=".:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --pdf R-lang.texi This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] [-1] Chapter 1 Writing index file R-lang.cp Chapter 2 [1] [2] Cross reference values unknown; you must run TeX again. Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] No file R-lang.vrs. (Concept index) [61] No file R-lang.cps. [62] ) (see the transcript file for additional information) Output written on R-lang.pdf (65 pages, 348665 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc [-1] [-2]) [-3] [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.vrs [61]) (Concept index) [62] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.cps) [63] [64] ) (see the transcript file for additional information) Output written on R-lang.pdf (70 pages, 391239 bytes). Transcript written on R-lang.log. This is pdfTeX, Version 3.141592653-2.6-1.40.26 (TeX Live 2025/dev/Debian) (preloaded format=pdfetex) restricted \write18 enabled. entering extended mode (./R-lang.texi (/usr/share/texmf/tex/texinfo/texinfo.tex Loading texinfo [version 2023-09-19.19]: pdf, fonts, glyphs, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/build/reproducible-path/r-base-4.5.0/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, microtype, and turning on texinfo input format.) Writing index file R-lang.vr (/build/reproducible-path/r-base-4.5.0/doc/manual/R-defs.texi (/usr/share/texmf/tex/texinfo/txi-en.tex)) (/build/reproducible-path/r-base-4.5.0/doc/manual/version.texi) [1{/var/lib/tex mf/fonts/map/pdftex/updmap/pdftex.map}] [2] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc [-1] [-2]) [-3] [-4] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.toc) Chapter 1 (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.aux) Writing index file R-lang.cp Chapter 2 [1] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 255--256 @textbf storage.mode| [3] [4] [5] [6] [7] [8] Chapter 3 [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] Chapter 4 [24] [25] [26] [27] Chapter 5 [28] [29] [30] [31] [32] [33] [34] Chapter 6 [35] [36] [37] [38] [39] [40] [41] [42] [43] Chapter 7 [44] [45] Chapter 8 [46] [47] Chapter 9 [48] [49] [50] Chapter 10 [51] [52] [53] [54] [55] [56] [57] [58] (References) [59] (Function and variable index) [60] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.vrs [61]) (Concept index) [62] (/build/reproducible-path/r-base-4.5.0/doc/manual/R-lang.cps) [63] [64] ) (see the transcript file for additional information) Output written on R-lang.pdf (70 pages, 391235 bytes). Transcript written on R-lang.log. installing R manuals in PDF format ... make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' make prefix=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr \ infodir=/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info install-info make[1]: Entering directory '/build/reproducible-path/r-base-4.5.0' make[2]: Entering directory '/build/reproducible-path/r-base-4.5.0/doc/manual' /usr/bin/texi2any --enable-encoding -I. R-FAQ.texi /usr/bin/texi2any --enable-encoding -I. R-admin.texi /usr/bin/texi2any --enable-encoding -I. R-data.texi /usr/bin/texi2any --enable-encoding -I. R-exts.texi /usr/bin/texi2any --enable-encoding -I. R-intro.texi /usr/bin/texi2any --enable-encoding -I. R-ints.texi /usr/bin/texi2any --enable-encoding -I. R-lang.texi mkdir -p -- /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info /usr/bin/install -c -m 644 "./dir" "/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info" installing R info pages ... updating '/build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir' ... you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually you need to adjust /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/dir manually make[2]: Leaving directory '/build/reproducible-path/r-base-4.5.0/doc/manual' make[1]: Leaving directory '/build/reproducible-path/r-base-4.5.0' dh_movefiles --sourcedir=debian/r-base-core -pr-doc-pdf dh_movefiles --sourcedir=debian/r-base-core -pr-doc-html gunzip -9v /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/*.gz /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-FAQ.info.gz: 67.5% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-FAQ.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-admin.info.gz: 68.1% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-admin.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-data.info.gz: 70.8% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-data.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-1.gz: 66.9% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-1 /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-2.gz: 67.9% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-2 /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-3.gz: 80.1% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info-3 /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info.gz: 70.2% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-exts.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-intro.info.gz: 70.4% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-intro.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-ints.info.gz: 68.8% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-ints.info /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-lang.info.gz: 72.0% -- replaced with /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/info/R-lang.info dh_movefiles --sourcedir=debian/r-base-core -pr-doc-info rm -vf /build/reproducible-path/r-base-4.5.0/debian/r-doc-info/usr/share/info/dir \ /build/reproducible-path/r-base-4.5.0/debian/r-doc-info/usr/share/info/dir.old removed '/build/reproducible-path/r-base-4.5.0/debian/r-doc-info/usr/share/info/dir' touch install-indep-stamp dh_installdirs -pr-mathlib usr/include usr/lib \ usr/share/lintian/overrides \ usr/lib/pkgconfig dh_movefiles --sourcedir=debian/r-base-core -pr-mathlib (cd /build/reproducible-path/r-base-4.5.0/debian/r-mathlib/usr/lib; \ ls -l ; \ mv -v libRmath.so libRmath.so.1.0.0; \ ln -sv libRmath.so.1.0.0 libRmath.so.1; \ ln -sv libRmath.so.1 libRmath.so) total 1860 -rw-r--r-- 1 sbuild sbuild 1091956 Jul 21 15:35 libRmath.a -rwxr-xr-x 1 sbuild sbuild 805040 Jul 21 15:35 libRmath.so drwxr-xr-x 2 sbuild sbuild 4096 Jul 21 15:38 pkgconfig renamed 'libRmath.so' -> 'libRmath.so.1.0.0' 'libRmath.so.1' -> 'libRmath.so.1.0.0' 'libRmath.so' -> 'libRmath.so.1' install -m 0644 src/include/Rmath.h \ /build/reproducible-path/r-base-4.5.0/debian/r-mathlib/usr/include install -m 0644 debian/Rprofile.site /build/reproducible-path/r-base-4.5.0/debian/r-base-core/etc/R install -m 0644 debian/Renviron.site /build/reproducible-path/r-base-4.5.0/debian/r-base-core/etc/R (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/etc; \ mv Makeconf repositories ldpaths ../../../../etc/R/; \ mv Renviron Renviron.ucf; \ ln -s /etc/R/Makeconf .; \ ln -s /etc/R/Renviron .; \ ln -s /etc/R/Renviron.site .; \ ln -s /etc/R/Rprofile.site .; \ ln -s /etc/R/ldpaths .; \ ln -s /etc/R/repositories . ) dh_bash-completion # edd 12 Jan 2016 new location #install -m 0644 debian/R.bash-completion \ # debian/r-base-core/usr/share/bash-completion/completions/R (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/; \ ln -sv R/lib/libR.so . ) './libR.so' -> 'R/lib/libR.so' (cd debian/icon-class-patch && munpack rlogo_icon.png.mpack) rlogo_icon.png (application/octet-stream) install -m 0644 debian/icon-class-patch/rlogo_icon.png \ debian/r-base-core/usr/share/icons/hicolor/48x48/apps install -m 0644 debian/icon-class-patch/Rlogo.svg \ debian/r-base-core/usr/share/icons/hicolor/scalable/apps/rlogo_icon.svg install -m 0644 debian/icon-class-patch/R.desktop \ debian/r-base-core/usr/share/applications rm debian/icon-class-patch/rlogo_icon.png touch install-arch-stamp *** binary-arch *** dh_testdir -a dh_testroot -a dh_installdocs -pr-base-core doc/NEWS.* README \ debian/README.Atlas \ debian/README.mathlib dh_installdocs -pr-mathlib doc/NEWS.* README \ debian/README.mathlib dh_installexamples -pr-mathlib src/nmath/standalone/test.c (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../R/doc .) (cd /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/doc/r-base-core && ln -s ../../../lib/R/library .) install -p -m 0644 debian/r-base-core.lintian \ /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/share/lintian/overrides/r-base-core install -p -m 0644 debian/r-recommended.lintian \ /build/reproducible-path/r-base-4.5.0/debian/r-recommended/usr/share/lintian/overrides/r-recommended install -p -m 0644 debian/r-mathlib.lintian \ /build/reproducible-path/r-base-4.5.0/debian/r-mathlib/usr/share/lintian/overrides/r-mathlib dh_installchangelogs -a -k doc/NEWS dh_strip -a dh_compress -a dh_fixperms -a dh_link -a dh_makeshlibs -a dh_installdeb -a dh_perl -a dh_shlibdeps -a -l /build/reproducible-path/r-base-4.5.0/debian/r-base-core/usr/lib/R/lib dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dpkg-shlibdeps: warning: can't extract name and version from library name 'libR.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libtcl8.6.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libtk8.6.so' dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libreadline8t64 from: /lib/arm-linux-gnueabihf/libreadline.so.8 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libreadline8t64 to: /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libtirpc3t64 from: /lib/arm-linux-gnueabihf/libtirpc.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libtirpc3t64 to: /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged *** Getting graphics engine version from 'GraphicsEngine.h' header echo R_GE_version | cpp -I ./src/include/ -include R_ext/GraphicsEngine.h | tail -n1 | sed 's/^/graphicsengine:Version=/' >> debian/r-base-core.substvars dh_gencontrol -a dh_md5sums -a dh_builddeb -a dpkg-deb: building package 'r-base-core' in '../r-base-core_4.5.0-3_armhf.deb'. dpkg-deb: building package 'r-mathlib-dbgsym' in '../r-mathlib-dbgsym_4.5.0-3_armhf.deb'. dpkg-deb: building package 'r-base-core-dbgsym' in '../r-base-core-dbgsym_4.5.0-3_armhf.deb'. dpkg-deb: building package 'r-mathlib' in '../r-mathlib_4.5.0-3_armhf.deb'. dpkg-genbuildinfo --build=any -O../r-base_4.5.0-3_armhf.buildinfo dpkg-genchanges --build=any -O../r-base_4.5.0-3_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2025-07-21T15:38:22Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Mon, 21 Jul 2025 15:38:23 +0000 | +------------------------------------------------------------------------------+ r-base_4.5.0-3_armhf.changes: ----------------------------- Format: 1.8 Date: Tue, 29 Apr 2025 16:56:39 -0500 Source: r-base Binary: r-base-core r-base-core-dbgsym r-mathlib r-mathlib-dbgsym Architecture: armhf Version: 4.5.0-3 Distribution: unstable Urgency: medium Maintainer: Dirk Eddelbuettel Changed-By: Dirk Eddelbuettel Description: r-base-core - GNU R core of statistical computation and graphics system r-mathlib - GNU R standalone mathematics library Changes: r-base (4.5.0-3) unstable; urgency=medium . * debian/control: Update Breaks: for r-base-core to aid the transition of this 4.5.0 release to the upcoming 'trixie' release Checksums-Sha1: f12aa415d442daaac885d7a403f73cce73e31786 6502120 r-base-core-dbgsym_4.5.0-3_armhf.deb d769f38827b6ea58480ebc405ed90008863e12d6 28341352 r-base-core_4.5.0-3_armhf.deb d540e6173d2045bae01865567cd3b60e9079ff06 16833 r-base_4.5.0-3_armhf.buildinfo 5db659cde40a65866ddb9808bd400ebac5eac7c2 218748 r-mathlib-dbgsym_4.5.0-3_armhf.deb bc3563c6e1d90cbcc93c970ad374e265518cda05 2670040 r-mathlib_4.5.0-3_armhf.deb Checksums-Sha256: 4ff06ea3922f123cf8f81b150465cd58e685529e9632bd27ab05889dc911275e 6502120 r-base-core-dbgsym_4.5.0-3_armhf.deb 9de358ff910832db742006f47b4317df458dd76edca1e999fe28b215514499d4 28341352 r-base-core_4.5.0-3_armhf.deb 7c3831faa4035c42517869084b1c7feb77188b528346c34d11475b313e748bbd 16833 r-base_4.5.0-3_armhf.buildinfo e4fcfa6ae61fd777e0f618d3d3d0af7e125448a0ac5e45231b45c275a4880797 218748 r-mathlib-dbgsym_4.5.0-3_armhf.deb 01cfb6671fdaef859aab95c2bdbc37d93db26e3ec3671b68d34646d402b7f2f9 2670040 r-mathlib_4.5.0-3_armhf.deb Files: 796bd2d9b9997ff31d138d865e889483 6502120 debug optional r-base-core-dbgsym_4.5.0-3_armhf.deb 6185eebe30fea28ad485e3312fb09d40 28341352 gnu-r optional r-base-core_4.5.0-3_armhf.deb 0634bdb2f3b4556304313dd665162018 16833 gnu-r optional r-base_4.5.0-3_armhf.buildinfo 7baf666deab53ffe5f40d74df27b7c82 218748 debug optional r-mathlib-dbgsym_4.5.0-3_armhf.deb e1b1ff557e0de6abb192984b29d34f05 2670040 gnu-r optional r-mathlib_4.5.0-3_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo Mon, 21 Jul 2025 15:38:23 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: r-base Binary: r-base-core r-base-core-dbgsym r-mathlib r-mathlib-dbgsym Architecture: armhf Version: 4.5.0-3 Checksums-Md5: 796bd2d9b9997ff31d138d865e889483 6502120 r-base-core-dbgsym_4.5.0-3_armhf.deb 6185eebe30fea28ad485e3312fb09d40 28341352 r-base-core_4.5.0-3_armhf.deb 7baf666deab53ffe5f40d74df27b7c82 218748 r-mathlib-dbgsym_4.5.0-3_armhf.deb e1b1ff557e0de6abb192984b29d34f05 2670040 r-mathlib_4.5.0-3_armhf.deb Checksums-Sha1: f12aa415d442daaac885d7a403f73cce73e31786 6502120 r-base-core-dbgsym_4.5.0-3_armhf.deb d769f38827b6ea58480ebc405ed90008863e12d6 28341352 r-base-core_4.5.0-3_armhf.deb 5db659cde40a65866ddb9808bd400ebac5eac7c2 218748 r-mathlib-dbgsym_4.5.0-3_armhf.deb bc3563c6e1d90cbcc93c970ad374e265518cda05 2670040 r-mathlib_4.5.0-3_armhf.deb Checksums-Sha256: 4ff06ea3922f123cf8f81b150465cd58e685529e9632bd27ab05889dc911275e 6502120 r-base-core-dbgsym_4.5.0-3_armhf.deb 9de358ff910832db742006f47b4317df458dd76edca1e999fe28b215514499d4 28341352 r-base-core_4.5.0-3_armhf.deb e4fcfa6ae61fd777e0f618d3d3d0af7e125448a0ac5e45231b45c275a4880797 218748 r-mathlib-dbgsym_4.5.0-3_armhf.deb 01cfb6671fdaef859aab95c2bdbc37d93db26e3ec3671b68d34646d402b7f2f9 2670040 r-mathlib_4.5.0-3_armhf.deb Build-Origin: Debian Build-Architecture: armhf Build-Date: Mon, 21 Jul 2025 15:38:21 +0000 Build-Path: /build/reproducible-path/r-base-4.5.0 Installed-Build-Depends: adwaita-icon-theme (= 48.0-1), at-spi2-common (= 2.56.2-1), autoconf (= 2.72-3.1), automake (= 1:1.17-4), autopoint (= 0.23.1-2), autotools-dev (= 20240727.1), base-files (= 13.7), base-passwd (= 3.6.7), bash (= 5.2.37-2), bash-completion (= 1:2.16.0-7), binutils (= 2.44-3), binutils-arm-linux-gnueabihf (= 2.44-3), binutils-common (= 2.44-3), bison (= 2:3.8.2+dfsg-1+b2), bsdextrautils (= 2.41-4), bsdutils (= 1:2.41-4), build-essential (= 12.12), bzip2 (= 1.0.8-6), ca-certificates (= 20250419), ca-certificates-java (= 20240118), comerr-dev (= 2.1-1.47.2-1+b1), coreutils (= 9.7-2), cpp (= 4:14.2.0-1), cpp-14 (= 14.2.0-19), cpp-14-arm-linux-gnueabihf (= 14.2.0-19), cpp-arm-linux-gnueabihf (= 4:14.2.0-1), dash (= 0.5.12-12), dbus (= 1.16.2-2), dbus-bin (= 1.16.2-2), dbus-daemon (= 1.16.2-2), dbus-session-bus-common (= 1.16.2-2), dbus-system-bus-common (= 1.16.2-2), dbus-user-session (= 1.16.2-2), dconf-gsettings-backend (= 0.40.0-5), dconf-service (= 0.40.0-5), debconf (= 1.5.91), debhelper (= 13.24.2), debianutils (= 5.22), default-jdk (= 2:1.21-76), default-jdk-headless (= 2:1.21-76), default-jre (= 2:1.21-76), default-jre-headless (= 2:1.21-76), dh-autoreconf (= 20), dh-strip-nondeterminism (= 1.14.1-2), diffutils (= 1:3.10-4), dpkg (= 1.22.18), dpkg-dev (= 1.22.18), dwz (= 0.15-1+b2), file (= 1:5.46-5), findutils (= 4.10.0-3), fontconfig (= 2.15.0-2.3), fontconfig-config (= 2.15.0-2.3), fonts-dejavu-core (= 2.37-8), fonts-dejavu-mono (= 2.37-8), fonts-lmodern (= 2.005-1), g++ (= 4:14.2.0-1), g++-14 (= 14.2.0-19), g++-14-arm-linux-gnueabihf (= 14.2.0-19), g++-arm-linux-gnueabihf (= 4:14.2.0-1), gcc (= 4:14.2.0-1), gcc-14 (= 14.2.0-19), gcc-14-arm-linux-gnueabihf (= 14.2.0-19), gcc-14-base (= 14.2.0-19), gcc-arm-linux-gnueabihf (= 4:14.2.0-1), gettext (= 0.23.1-2), gettext-base (= 0.23.1-2), gfortran (= 4:14.2.0-1), gfortran-14 (= 14.2.0-19), gfortran-14-arm-linux-gnueabihf (= 14.2.0-19), gfortran-arm-linux-gnueabihf (= 4:14.2.0-1), gir1.2-freedesktop (= 1.84.0-1), gir1.2-freedesktop-dev (= 1.84.0-1), gir1.2-glib-2.0 (= 2.84.1-2), gir1.2-glib-2.0-dev (= 2.84.1-2), gir1.2-harfbuzz-0.0 (= 10.2.0-1+b1), gir1.2-pango-1.0 (= 1.56.3-1), girepository-tools (= 2.84.1-2), grep (= 3.11-4), groff-base (= 1.23.0-7), gtk-update-icon-cache (= 4.18.4+ds-2), gzip (= 1.13-1), hicolor-icon-theme (= 0.18-2), hostname (= 3.25), icu-devtools (= 76.1-3), init-system-helpers (= 1.68), intltool-debian (= 0.35.0+20060710.6), java-common (= 0.76), krb5-multidev (= 1.21.3-5), libacl1 (= 2.3.2-2+b1), libapache-pom-java (= 33-2), libapparmor1 (= 4.1.0-1), libarchive-zip-perl (= 1.68-1), libasan8 (= 14.2.0-19), libasound2-data (= 1.2.14-1), libasound2t64 (= 1.2.14-1), libatk-bridge2.0-0t64 (= 2.56.2-1), libatk1.0-0t64 (= 2.56.2-1), libatomic1 (= 14.2.0-19), libatspi2.0-0t64 (= 2.56.2-1), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.0.2-2), libaudit1 (= 1:4.0.2-2+b2), libavahi-client3 (= 0.8-16), libavahi-common-data (= 0.8-16), libavahi-common3 (= 0.8-16), libbinutils (= 2.44-3), libblas-dev (= 3.12.1-2), libblas3 (= 3.12.1-2), libblkid-dev (= 2.41-4), libblkid1 (= 2.41-4), libbrotli-dev (= 1.1.0-2+b7), libbrotli1 (= 1.1.0-2+b7), libbsd0 (= 0.12.2-2), libbz2-1.0 (= 1.0.8-6), libbz2-dev (= 1.0.8-6), libc-bin (= 2.41-7), libc-dev-bin (= 2.41-7), libc6 (= 2.41-7), libc6-dev (= 2.41-7), libcairo-gobject2 (= 1.18.4-1+b1), libcairo-script-interpreter2 (= 1.18.4-1+b1), libcairo2 (= 1.18.4-1+b1), libcairo2-dev (= 1.18.4-1+b1), libcap-ng0 (= 0.8.5-4+b1), libcap2 (= 1:2.75-7), libcc1-0 (= 14.2.0-19), libcloudproviders0 (= 0.3.6-2), libcolord2 (= 1.4.7-3), libcom-err2 (= 1.47.2-1+b1), libcommons-logging-java (= 1.3.0-1), libcommons-parent-java (= 56-1), libcrypt-dev (= 1:4.4.38-1), libcrypt1 (= 1:4.4.38-1), libctf-nobfd0 (= 2.44-3), libctf0 (= 2.44-3), libcups2t64 (= 2.4.10-2+b1), libcurl4-openssl-dev (= 8.13.0-5), libcurl4t64 (= 8.13.0-5), libdatrie-dev (= 0.2.13-3+b1), libdatrie1 (= 0.2.13-3+b1), libdb5.3t64 (= 5.3.28+dfsg2-9), libdbus-1-3 (= 1.16.2-2), libdconf1 (= 0.40.0-5), libdebconfclient0 (= 0.278), libdebhelper-perl (= 13.24.2), libdeflate-dev (= 1.23-2), libdeflate0 (= 1.23-2), libdpkg-perl (= 1.22.18), libdrm-amdgpu1 (= 2.4.124-2), libdrm-common (= 2.4.124-2), libdrm2 (= 2.4.124-2), libedit2 (= 3.1-20250104-1), libelf1t64 (= 0.192-4), libepoxy0 (= 1.5.10-2), libevent-2.1-7t64 (= 2.1.12-stable-10+b1), libexpat1 (= 2.7.1-1), libexpat1-dev (= 2.7.1-1), libffi-dev (= 3.4.8-2), libffi8 (= 3.4.8-2), libfile-homedir-perl (= 1.006-2), libfile-stripnondeterminism-perl (= 1.14.1-2), libfile-which-perl (= 1.27-2), libfontbox-java (= 1:1.8.16-5), libfontconfig-dev (= 2.15.0-2.3), libfontconfig1 (= 2.15.0-2.3), libfontconfig1-dev (= 2.15.0-2.3), libfontenc1 (= 1:1.1.8-1+b2), libfreetype-dev (= 2.13.3+dfsg-1), libfreetype6 (= 2.13.3+dfsg-1), libfribidi-dev (= 1.0.16-1), libfribidi0 (= 1.0.16-1), libgbm1 (= 25.0.4-1), libgcc-14-dev (= 14.2.0-19), libgcc-s1 (= 14.2.0-19), libgdbm-compat4t64 (= 1.24-2), libgdbm6t64 (= 1.24-2), libgdk-pixbuf-2.0-0 (= 2.42.12+dfsg-2), libgdk-pixbuf2.0-common (= 2.42.12+dfsg-2), libgfortran-14-dev (= 14.2.0-19), libgfortran5 (= 14.2.0-19), libgif7 (= 5.2.2-1+b1), libgio-2.0-dev (= 2.84.1-2), libgio-2.0-dev-bin (= 2.84.1-2), libgirepository-2.0-0 (= 2.84.1-2), libgl1 (= 1.7.0-1+b2), libgl1-mesa-dri (= 25.0.4-1), libglib2.0-0t64 (= 2.84.1-2), libglib2.0-bin (= 2.84.1-2), libglib2.0-data (= 2.84.1-2), libglib2.0-dev (= 2.84.1-2), libglib2.0-dev-bin (= 2.84.1-2), libglvnd0 (= 1.7.0-1+b2), libglx-mesa0 (= 25.0.4-1), libglx0 (= 1.7.0-1+b2), libgmp-dev (= 2:6.3.0+dfsg-3), libgmp10 (= 2:6.3.0+dfsg-3), libgmpxx4ldbl (= 2:6.3.0+dfsg-3), libgnutls-dane0t64 (= 3.8.9-2), libgnutls-openssl27t64 (= 3.8.9-2), libgnutls28-dev (= 3.8.9-2), libgnutls30t64 (= 3.8.9-2), libgomp1 (= 14.2.0-19), libgraphite2-3 (= 1.3.14-2+b1), libgraphite2-dev (= 1.3.14-2+b1), libgssapi-krb5-2 (= 1.21.3-5), libgssrpc4t64 (= 1.21.3-5), libgtk-3-0t64 (= 3.24.49-3), libgtk-3-common (= 3.24.49-3), libharfbuzz-cairo0 (= 10.2.0-1+b1), libharfbuzz-dev (= 10.2.0-1+b1), libharfbuzz-gobject0 (= 10.2.0-1+b1), libharfbuzz-icu0 (= 10.2.0-1+b1), libharfbuzz-subset0 (= 10.2.0-1+b1), libharfbuzz0b (= 10.2.0-1+b1), libhogweed6t64 (= 3.10.1-1), libice-dev (= 2:1.1.1-1), libice6 (= 2:1.1.1-1), libicu-dev (= 76.1-3), libicu76 (= 76.1-3), libidn2-0 (= 2.3.8-2), libidn2-dev (= 2.3.8-2), libisl23 (= 0.27-1), libjansson4 (= 2.14-2+b3), libjbig-dev (= 2.1-6.1+b2), libjbig0 (= 2.1-6.1+b2), libjpeg-dev (= 1:2.1.5-3.1), libjpeg62-turbo (= 1:2.1.5-3.1), libjpeg62-turbo-dev (= 1:2.1.5-3.1), libjs-jquery (= 3.6.1+dfsg+~3.5.14-1), libk5crypto3 (= 1.21.3-5), libkadm5clnt-mit12 (= 1.21.3-5), libkadm5srv-mit12 (= 1.21.3-5), libkdb5-10t64 (= 1.21.3-5), libkeyutils1 (= 1.6.3-6), libkpathsea6 (= 2024.20240313.70630+ds-6), libkrb5-3 (= 1.21.3-5), libkrb5-dev (= 1.21.3-5), libkrb5support0 (= 1.21.3-5), liblapack-dev (= 3.12.1-2), liblapack3 (= 3.12.1-2), liblastlog2-2 (= 2.41-4), liblcms2-2 (= 2.16-2), libldap-dev (= 2.6.9+dfsg-2), libldap2 (= 2.6.9+dfsg-2), liblerc-dev (= 4.0.0+ds-5), liblerc4 (= 4.0.0+ds-5), libllvm19 (= 1:19.1.7-3), liblzma-dev (= 5.8.1-1), liblzma5 (= 5.8.1-1), liblzo2-2 (= 2.10-3+b1), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmime-charset-perl (= 1.013.1-2), libmount-dev (= 2.41-4), libmount1 (= 2.41-4), libmpc3 (= 1.3.1-1+b3), libmpfi0 (= 1.5.4+ds-4), libmpfr6 (= 4.2.2-1), libncurses-dev (= 6.5+20250216-2), libncurses6 (= 6.5+20250216-2), libncursesw6 (= 6.5+20250216-2), libnettle8t64 (= 3.10.1-1), libnghttp2-14 (= 1.64.0-1.1), libnghttp2-dev (= 1.64.0-1.1), libnghttp3-9 (= 1.8.0-1), libnghttp3-dev (= 1.8.0-1), libnspr4 (= 2:4.36-1), libnss3 (= 2:3.110-1), libp11-kit-dev (= 0.25.5-3), libp11-kit0 (= 0.25.5-3), libpam-modules (= 1.7.0-3), libpam-modules-bin (= 1.7.0-3), libpam-runtime (= 1.7.0-3), libpam-systemd (= 257.5-2), libpam0g (= 1.7.0-3), libpango-1.0-0 (= 1.56.3-1), libpango1.0-dev (= 1.56.3-1), libpangocairo-1.0-0 (= 1.56.3-1), libpangoft2-1.0-0 (= 1.56.3-1), libpangoxft-1.0-0 (= 1.56.3-1), libpaper-utils (= 2.2.5-0.3+b2), libpaper2 (= 2.2.5-0.3+b2), libpcre2-16-0 (= 10.45-1), libpcre2-32-0 (= 10.45-1), libpcre2-8-0 (= 10.45-1), libpcre2-dev (= 10.45-1), libpcre2-posix3 (= 10.45-1), libpcsclite1 (= 2.3.3-1), libpdfbox-java (= 1:1.8.16-5), libperl5.40 (= 5.40.1-3), libpipeline1 (= 1.5.8-1), libpixman-1-0 (= 0.44.0-3), libpixman-1-dev (= 0.44.0-3), libpkgconf3 (= 1.8.1-4), libpng-dev (= 1.6.47-1.1), libpng16-16t64 (= 1.6.47-1.1), libpotrace0 (= 1.16-2+b2), libproc2-0 (= 2:4.0.4-8), libpsl-dev (= 0.21.2-1.1+b1), libpsl5t64 (= 0.21.2-1.1+b1), libptexenc1 (= 2024.20240313.70630+ds-6), libpython3-stdlib (= 3.13.3-1), libpython3.13-minimal (= 3.13.3-2), libpython3.13-stdlib (= 3.13.3-2), libreadline-dev (= 8.2-6), libreadline8t64 (= 8.2-6), librtmp-dev (= 2.4+20151223.gitfa8646d.1-2+b5), librtmp1 (= 2.4+20151223.gitfa8646d.1-2+b5), libsasl2-2 (= 2.1.28+dfsg1-9), libsasl2-modules-db (= 2.1.28+dfsg1-9), libseccomp2 (= 2.6.0-2), libselinux1 (= 3.8.1-1), libselinux1-dev (= 3.8.1-1), libsensors-config (= 1:3.6.2-2), libsensors5 (= 1:3.6.2-2), libsepol-dev (= 3.8.1-1), libsepol2 (= 3.8.1-1), libsframe1 (= 2.44-3), libsharpyuv-dev (= 1.5.0-0.1), libsharpyuv0 (= 1.5.0-0.1), libsm-dev (= 2:1.2.6-1), libsm6 (= 2:1.2.6-1), libsmartcols1 (= 2.41-4), libsombok3 (= 2.4.0-2+b2), libsqlite3-0 (= 3.46.1-3), libssh2-1-dev (= 1.11.1-1), libssh2-1t64 (= 1.11.1-1), libssl-dev (= 3.5.0-1), libssl3t64 (= 3.5.0-1), libstdc++-14-dev (= 14.2.0-19), libstdc++6 (= 14.2.0-19), libsynctex2 (= 2024.20240313.70630+ds-6), libsysprof-capture-4-dev (= 48.0-2), libsystemd-shared (= 257.5-2), libsystemd0 (= 257.5-2), libtasn1-6 (= 4.20.0-2), libtasn1-6-dev (= 4.20.0-2), libtcl8.6 (= 8.6.16+dfsg-1), libteckit0 (= 2.5.12+ds1-1+b1), libtexlua53-5 (= 2024.20240313.70630+ds-6), libtext-charwidth-perl (= 0.04-11+b4), libtext-unidecode-perl (= 1.30-3), libtext-wrapi18n-perl (= 0.06-10), libthai-data (= 0.1.29-2), libthai-dev (= 0.1.29-2+b1), libthai0 (= 0.1.29-2+b1), libtiff-dev (= 4.7.0-3), libtiff6 (= 4.7.0-3), libtiffxx6 (= 4.7.0-3), libtinfo6 (= 6.5+20250216-2), libtirpc-common (= 1.3.6+ds-1), libtirpc-dev (= 1.3.6+ds-1), libtirpc3t64 (= 1.3.6+ds-1), libtk8.6 (= 8.6.16-1), libtool (= 2.5.4-4), libubsan1 (= 14.2.0-19), libuchardet0 (= 0.0.8-1+b2), libudev1 (= 257.5-2), libunbound8 (= 1.22.0-1+b1), libunicode-linebreak-perl (= 0.0.20190101-1+b9), libunistring5 (= 1.3-2), libuuid1 (= 2.41-4), libvulkan1 (= 1.4.309.0-1), libwayland-client0 (= 1.23.1-3), libwayland-cursor0 (= 1.23.1-3), libwayland-egl1 (= 1.23.1-3), libwayland-server0 (= 1.23.1-3), libwebp-dev (= 1.5.0-0.1), libwebp7 (= 1.5.0-0.1), libwebpdecoder3 (= 1.5.0-0.1), libwebpdemux2 (= 1.5.0-0.1), libwebpmux3 (= 1.5.0-0.1), libx11-6 (= 2:1.8.12-1), libx11-data (= 2:1.8.12-1), libx11-dev (= 2:1.8.12-1), libx11-xcb1 (= 2:1.8.12-1), libxau-dev (= 1:1.0.11-1), libxau6 (= 1:1.0.11-1), libxaw7 (= 2:1.0.16-1), libxcb-dri3-0 (= 1.17.0-2+b1), libxcb-glx0 (= 1.17.0-2+b1), libxcb-present0 (= 1.17.0-2+b1), libxcb-randr0 (= 1.17.0-2+b1), libxcb-render0 (= 1.17.0-2+b1), libxcb-render0-dev (= 1.17.0-2+b1), libxcb-shm0 (= 1.17.0-2+b1), libxcb-shm0-dev (= 1.17.0-2+b1), libxcb-sync1 (= 1.17.0-2+b1), libxcb-xfixes0 (= 1.17.0-2+b1), libxcb1 (= 1.17.0-2+b1), libxcb1-dev (= 1.17.0-2+b1), libxcomposite1 (= 1:0.4.6-1), libxcursor1 (= 1:1.2.3-1), libxdamage1 (= 1:1.1.6-1+b2), libxdmcp-dev (= 1:1.1.5-1), libxdmcp6 (= 1:1.1.5-1), libxext-dev (= 2:1.3.4-1+b3), libxext6 (= 2:1.3.4-1+b3), libxfixes3 (= 1:6.0.0-2+b4), libxfont2 (= 1:2.0.6-1+b3), libxft-dev (= 2.3.6-1+b4), libxft2 (= 2.3.6-1+b4), libxi6 (= 2:1.8.2-1), libxinerama1 (= 2:1.1.4-3+b4), libxkbcommon0 (= 1.7.0-2), libxkbfile1 (= 1:1.1.0-1+b4), libxml-libxml-perl (= 2.0207+dfsg+really+2.0134-5+b2), libxml-namespacesupport-perl (= 1.12-2), libxml-sax-base-perl (= 1.09-3), libxml-sax-perl (= 1.02+dfsg-4), libxml2 (= 2.12.7+dfsg+really2.9.14-0.4), libxmu6 (= 2:1.1.3-3+b4), libxmuu1 (= 2:1.1.3-3+b4), libxpm4 (= 1:3.5.17-1+b3), libxrandr2 (= 2:1.5.4-1+b3), libxrender-dev (= 1:0.9.12-1), libxrender1 (= 1:0.9.12-1), libxshmfence1 (= 1.3.3-1), libxss-dev (= 1:1.2.3-1+b3), libxss1 (= 1:1.2.3-1+b3), libxt-dev (= 1:1.2.1-1.2+b2), libxt6t64 (= 1:1.2.1-1.2+b2), libxtst6 (= 2:1.2.5-1), libxxf86vm1 (= 1:1.1.4-1+b4), libyaml-tiny-perl (= 1.76-1), libz3-4 (= 4.13.3-1), libzstd-dev (= 1.5.7+dfsg-1), libzstd1 (= 1.5.7+dfsg-1), libzzip-0-13t64 (= 0.13.78+dfsg.1-0.1), linux-libc-dev (= 6.12.25-1), lmodern (= 2.005-1), m4 (= 1.4.19-8), make (= 4.4.1-2), man-db (= 2.13.0-1), mawk (= 1.3.4.20250131-1), media-types (= 13.0.0), mesa-libgallium (= 25.0.4-1), mount (= 2.41-4), mpack (= 1.6-18+b2), native-architecture (= 0.2.6), ncurses-base (= 6.5+20250216-2), ncurses-bin (= 6.5+20250216-2), netbase (= 6.5), nettle-dev (= 3.10.1-1), openjdk-21-jdk (= 21.0.7+6-1), openjdk-21-jdk-headless (= 21.0.7+6-1), openjdk-21-jre (= 21.0.7+6-1), openjdk-21-jre-headless (= 21.0.7+6-1), openssl (= 3.5.0-1), openssl-provider-legacy (= 3.5.0-1), pango1.0-tools (= 1.56.3-1), patch (= 2.8-1), perl (= 5.40.1-3), perl-base (= 5.40.1-3), perl-modules-5.40 (= 5.40.1-3), pkgconf (= 1.8.1-4), pkgconf-bin (= 1.8.1-4), po-debconf (= 1.0.21+nmu1), preview-latex-style (= 13.2-1), procps (= 2:4.0.4-8), python3 (= 3.13.3-1), python3-minimal (= 3.13.3-1), python3-packaging (= 25.0-1), python3.13 (= 3.13.3-2), python3.13-minimal (= 3.13.3-2), readline-common (= 8.2-6), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.25), shared-mime-info (= 2.4-5+b2), systemd (= 257.5-2), systemd-sysv (= 257.5-2), sysvinit-utils (= 3.14-4), t1utils (= 1.41-4), tar (= 1.35+dfsg-3.1), tcl8.6 (= 8.6.16+dfsg-1), tcl8.6-dev (= 8.6.16+dfsg-1), tex-common (= 6.19), texinfo (= 7.1.1-1), texinfo-lib (= 7.1.1-1+b1), texlive-base (= 2024.20250309-1), texlive-binaries (= 2024.20240313.70630+ds-6), texlive-extra-utils (= 2024.20250309-2), texlive-fonts-extra (= 2024.20250309-2), texlive-fonts-recommended (= 2024.20250309-1), texlive-latex-base (= 2024.20250309-1), texlive-latex-extra (= 2024.20250309-2), texlive-latex-recommended (= 2024.20250309-1), texlive-luatex (= 2024.20250309-1), texlive-pictures (= 2024.20250309-1), texlive-plain-generic (= 2024.20250309-2), tk8.6 (= 8.6.16-1), tk8.6-dev (= 8.6.16-1), tzdata (= 2025b-2), ucf (= 3.0051), util-linux (= 2.41-4), uuid-dev (= 2.41-4), x11-common (= 1:7.7+24), x11-xkb-utils (= 7.7+9), x11proto-core-dev (= 2024.1-1), x11proto-dev (= 2024.1-1), xauth (= 1:1.1.2-1.1), xdg-utils (= 1.2.1-2), xfonts-base (= 1:1.0.5+nmu1), xfonts-encodings (= 1:1.0.4-2.2), xfonts-utils (= 1:7.7+7), xkb-data (= 2.42-1), xorg-sgml-doctools (= 1:1.11-1.1), xserver-common (= 2:21.1.16-1), xtrans-dev (= 1.4.0-1), xvfb (= 2:21.1.16-1), xz-utils (= 5.8.1-1), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1745963799" +------------------------------------------------------------------------------+ | Package contents Mon, 21 Jul 2025 15:38:24 +0000 | +------------------------------------------------------------------------------+ r-base-core-dbgsym_4.5.0-3_armhf.deb ------------------------------------ new Debian package, version 2.0. size 6502120 bytes: control archive=1360 bytes. 1041 bytes, 12 lines control 1908 bytes, 18 lines md5sums Package: r-base-core-dbgsym Source: r-base Version: 4.5.0-3 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Dirk Eddelbuettel Installed-Size: 6807 Depends: r-base-core (= 4.5.0-3) Section: debug Priority: optional Description: debug symbols for r-base-core Build-Ids: 06c0839ec88443f91e61cecd346710602dfb5356 098ba6b44574c4e62a067ec57951da9155dec7f3 4af95a1e2e824d47c9eeec533510287194f458a5 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#!/bin/sh 880 bytes, 29 lines * prerm #!/bin/sh Package: r-base-core Source: r-base Version: 4.5.0-3 Architecture: armhf Maintainer: Dirk Eddelbuettel Installed-Size: 45041 Depends: zip, unzip, libpaper-utils, xdg-utils, libblas3 | libblas.so.3, libbz2-1.0, libc6 (>= 2.41), libcairo2 (>= 1.6.0), libcurl4t64 (>= 7.28.0), libdeflate0 (>= 1.0), libglib2.0-0t64 (>= 2.12.0), libgomp1 (>= 4.9), libicu76 (>= 76.1-1~), libjpeg62-turbo (>= 1.3.1), liblapack3 | liblapack.so.3, liblzma5 (>= 5.1.1alpha+20120614), libpango-1.0-0 (>= 1.18.0), libpangocairo-1.0-0 (>= 1.14.0), libpcre2-8-0 (>= 10.22), libpng16-16t64 (>= 1.6.46), libreadline8t64 (>= 6.0), libtcl8.6 (>= 8.6.0), libtiff6 (>= 4.0.3), libtirpc3t64 (>= 1.0.2), libtk8.6 (>= 8.6.0), libx11-6, libxt6t64, libzstd1 (>= 1.5.5), zlib1g (>= 1:1.1.4), ucf (>= 3.0), ca-certificates Recommends: r-recommended, r-base-dev, r-doc-html Suggests: elpa-ess, r-doc-info | r-doc-pdf, r-mathlib, r-base-html Breaks: r-bioc-bioccheck (<< 1.42.1+dfsg-2~), r-bioc-graph (<< 1.84.1-2~), r-bioc-iranges (<< 2.40.1-3~), r-bioc-pwalign (<< 1.2.0-3~), r-cran-rlang (<< 1.1.5-2~), r-cran-testthat (<< 3.2.3~) Replaces: r-base (<= 1.4.1-1), r-recommended (<< 1.9.0) Provides: r-api-4.0, r-graphics-engine-16 Section: gnu-r Priority: optional Homepage: http://www.r-project.org/ Description: GNU R core of statistical computation and graphics system R is a system for statistical computation and graphics. It consists of a language plus a run-time environment with graphics, a debugger, access to certain system functions, and the ability to run programs stored in script files. . The design of R has been heavily influenced by two existing languages: Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the resulting language is very similar in appearance to S, the underlying implementation and semantics are derived from Scheme. . The core of R is an interpreted computer language which allows branching and looping as well as modular programming using functions. Most of the user-visible functions in R are written in R. It is possible for the user to interface to procedures written in the C, C++, or FORTRAN languages for efficiency, and many of R's core functions do so. The R distribution contains functionality for a large number of statistical procedures and underlying applied math computations. There is also a large set of functions which provide a flexible graphical environment for creating various kinds of data presentations. . Additionally, several thousand extension "packages" are available from CRAN, the Comprehensive R Archive Network, many also as Debian packages, named 'r-cran-'. . This package provides the core GNU R system from which only the optional documentation packages r-base-html, r-doc-html, r-doc-pdf and r-doc-info have been split off to somewhat reduce the size of this package. drwxr-xr-x root/root 0 2025-04-29 21:56 ./ drwxr-xr-x root/root 0 2025-04-29 21:56 ./etc/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./etc/R/ -rw-r--r-- root/root 11684 2025-04-29 21:56 ./etc/R/Makeconf -rw-r--r-- root/root 1983 2025-04-29 21:56 ./etc/R/Renviron.site -rw-r--r-- root/root 988 2025-04-29 21:56 ./etc/R/Rprofile.site -rw-r--r-- root/root 789 2025-04-29 21:56 ./etc/R/ldpaths -rw-r--r-- root/root 1179 2025-04-29 21:56 ./etc/R/repositories drwxr-xr-x root/root 0 2025-04-29 21:56 ./etc/ld.so.conf.d/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/bin/ -rwxr-xr-x root/root 9067 2025-04-29 21:56 ./usr/bin/R -rwxr-xr-x root/root 67116 2025-04-29 21:56 ./usr/bin/Rscript drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/R/ lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/R/COPYING -> ../../share/common-licenses/GPL-2 -rw-r--r-- root/root 46 2025-04-29 21:56 ./usr/lib/R/SVN-REVISION drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/R/bin/ -rwxr-xr-x root/root 1838 2025-04-29 21:56 ./usr/lib/R/bin/BATCH -rwxr-xr-x root/root 2168 2025-04-29 21:56 ./usr/lib/R/bin/COMPILE -rwxr-xr-x root/root 825 2025-04-29 21:56 ./usr/lib/R/bin/INSTALL -rwxr-xr-x root/root 1324 2025-04-29 21:56 ./usr/lib/R/bin/LINK -rwxr-xr-x root/root 9067 2025-04-29 21:56 ./usr/lib/R/bin/R -rwxr-xr-x root/root 160 2025-04-29 21:56 ./usr/lib/R/bin/REMOVE -rwxr-xr-x root/root 1428 2025-04-29 21:56 ./usr/lib/R/bin/Rcmd -rwxr-xr-x root/root 318 2025-04-29 21:56 ./usr/lib/R/bin/Rd2pdf -rwxr-xr-x root/root 361 2025-04-29 21:56 ./usr/lib/R/bin/Rdconv -rwxr-xr-x root/root 260 2025-04-29 21:56 ./usr/lib/R/bin/Rdiff -rwxr-xr-x root/root 312 2025-04-29 21:56 ./usr/lib/R/bin/Rprof -rwxr-xr-x root/root 67116 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2025-04-29 21:56 ./usr/share/texmf/tex/latex/ lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/share/texmf/tex/latex/R -> ../../../R/share/texmf r-mathlib-dbgsym_4.5.0-3_armhf.deb ---------------------------------- new Debian package, version 2.0. size 218748 bytes: control archive=520 bytes. 337 bytes, 12 lines control 106 bytes, 1 lines md5sums Package: r-mathlib-dbgsym Source: r-base Version: 4.5.0-3 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Dirk Eddelbuettel Installed-Size: 241 Depends: r-mathlib (= 4.5.0-3) Section: debug Priority: optional Description: debug symbols for r-mathlib Build-Ids: fbfdc7a4de53aa0613ba7087662b2c149bcbd610 drwxr-xr-x root/root 0 2025-04-29 21:56 ./ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/debug/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/debug/.build-id/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/debug/.build-id/fb/ 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It consists of a language plus a run-time environment with graphics, a debugger, access to certain system functions, and the ability to run programs stored in script files. . The design of R has been heavily influenced by two existing languages: Becker, Chambers & Wilks' S and Sussman's Scheme. Whereas the resulting language is very similar in appearance to S, the underlying implementation and semantics are derived from Scheme. . The core of R is an interpreted computer language which allows branching and looping as well as modular programming using functions. Most of the user-visible functions in R are written in R. It is possible for the user to interface to procedures written in the C, C++, or FORTRAN languages for efficiency, and many of R's core functions do so. The R distribution contains functionality for a large number of statistical procedures and underlying applied math computations. There is also a large set of functions which provide a flexible graphical environment for creating various kinds of data presentations. . Additionally, several thousand extension "packages" are available from CRAN, the Comprehensive R Archive Network, many also as Debian packages, named 'r-cran-'. . This package provides the libRmath shared and static libraries which can be called from standalone C or C++ code. drwxr-xr-x root/root 0 2025-04-29 21:56 ./ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/include/ -rw-r--r-- root/root 20224 2025-04-29 21:56 ./usr/include/Rmath.h drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/ -rw-r--r-- root/root 260940 2025-04-29 21:56 ./usr/lib/libRmath.a lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/libRmath.so -> libRmath.so.1 lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/lib/libRmath.so.1 -> libRmath.so.1.0.0 -rw-r--r-- root/root 198452 2025-04-29 21:56 ./usr/lib/libRmath.so.1.0.0 drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/lib/pkgconfig/ -rw-r--r-- root/root 173 2025-04-29 21:56 ./usr/lib/pkgconfig/libRmath.pc drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/doc/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/doc/r-mathlib/ -rw-r--r-- root/root 35933 2024-12-04 14:08 ./usr/share/doc/r-mathlib/NEWS.0.gz -rw-r--r-- root/root 108741 2024-12-04 14:08 ./usr/share/doc/r-mathlib/NEWS.1.gz -rw-r--r-- root/root 96634 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.2.Rd.gz -rw-r--r-- root/root 229623 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.2.gz -rw-r--r-- root/root 397731 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.2.rds.gz -rw-r--r-- root/root 122205 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.3.Rd.gz -rw-r--r-- root/root 113053 2025-03-13 23:02 ./usr/share/doc/r-mathlib/NEWS.3.gz -rw-r--r-- root/root 515218 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.3.rds.gz -rw-r--r-- root/root 88583 2025-04-04 22:15 ./usr/share/doc/r-mathlib/NEWS.Rd.gz lrwxrwxrwx root/root 0 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.gz -> changelog.gz -rw-r--r-- root/root 376065 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.pdf.gz -rw-r--r-- root/root 378113 2025-04-29 21:56 ./usr/share/doc/r-mathlib/NEWS.rds.gz -rw-r--r-- root/root 2119 2025-04-01 22:15 ./usr/share/doc/r-mathlib/README.gz -rw-r--r-- root/root 3026 2024-04-10 20:08 ./usr/share/doc/r-mathlib/README.mathlib -rw-r--r-- root/root 5238 2025-04-29 21:56 ./usr/share/doc/r-mathlib/changelog.Debian.gz -rw-r--r-- root/root 81260 2025-04-29 21:56 ./usr/share/doc/r-mathlib/changelog.gz -rw-r--r-- root/root 20761 2024-04-10 20:08 ./usr/share/doc/r-mathlib/copyright drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/doc/r-mathlib/examples/ -rw-r--r-- root/root 1692 2025-03-13 23:02 ./usr/share/doc/r-mathlib/examples/test.c drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/lintian/ drwxr-xr-x root/root 0 2025-04-29 21:56 ./usr/share/lintian/overrides/ -rw-r--r-- root/root 364 2024-04-10 20:08 ./usr/share/lintian/overrides/r-mathlib +------------------------------------------------------------------------------+ | Post Build Mon, 21 Jul 2025 15:38:26 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Mon, 21 Jul 2025 15:38:26 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Mon, 21 Jul 2025 15:38:31 +0000 | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: 364228 Build-Time: 696 Distribution: unstable Host Architecture: armhf Install-Time: 4 Job: /srv/rebuilderd/tmp/rebuilderdQws567/inputs/r-base_4.5.0-3.dsc Machine Architecture: arm64 Package: r-base Package-Time: 729 Source-Version: 4.5.0-3 Space: 364228 Status: successful Version: 4.5.0-3 -------------------------------------------------------------------------------- Finished at 2025-07-21T15:38:22Z Build needed 00:12:09, 364228k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdQws567/out checking r-base-core-dbgsym_4.5.0-3_armhf.deb: size... sha1... sha256... md5... all OK checking r-base-core_4.5.0-3_armhf.deb: size differs for r-base-core_4.5.0-3_armhf.deb