=============================================================================== About this build: this rebuild has been done as part of reproduce.debian.net where we aim to reproduce Debian binary packages distributed via ftp.debian.org, by rebuilding using the exact same packages as the original build on the buildds, as described in the relevant .buildinfo file from buildinfos.debian.net. For more information please go to https://reproduce.debian.net or join #debian-reproducible on irc.debian.org =============================================================================== Preparing download of sources for /srv/rebuilderd/tmp/rebuilderdNMzwn6/inputs/macs_3.0.2-2+b1_armhf.buildinfo Source: macs Version: 3.0.2-2 rebuilderd-worker node: codethink01-arm64 +------------------------------------------------------------------------------+ | Downloading sources Thu, 08 Jan 2026 06:28:42 +0000 | +------------------------------------------------------------------------------+ Get:1 https://deb.debian.org/debian trixie InRelease [140 kB] Get:2 https://deb.debian.org/debian-security trixie-security InRelease [43.4 kB] Get:3 https://deb.debian.org/debian trixie-updates InRelease [47.3 kB] Get:4 https://deb.debian.org/debian trixie-proposed-updates InRelease [60.6 kB] Get:5 https://deb.debian.org/debian trixie-backports InRelease [54.0 kB] Get:6 https://deb.debian.org/debian forky InRelease [137 kB] Get:7 https://deb.debian.org/debian sid InRelease [187 kB] Get:8 https://deb.debian.org/debian experimental InRelease [91.1 kB] Get:9 https://deb.debian.org/debian trixie/main Sources [10.5 MB] Get:10 https://deb.debian.org/debian trixie/non-free-firmware Sources [6548 B] Get:11 https://deb.debian.org/debian-security trixie-security/main Sources [117 kB] Get:12 https://deb.debian.org/debian-security trixie-security/non-free-firmware Sources [696 B] Get:13 https://deb.debian.org/debian trixie-updates/main Sources [2788 B] Get:14 https://deb.debian.org/debian trixie-proposed-updates/non-free-firmware Sources [692 B] Get:15 https://deb.debian.org/debian trixie-proposed-updates/main Sources [217 kB] Get:16 https://deb.debian.org/debian trixie-backports/non-free-firmware Sources [2468 B] Get:17 https://deb.debian.org/debian trixie-backports/main Sources [123 kB] Get:18 https://deb.debian.org/debian forky/main Sources [10.6 MB] Get:19 https://deb.debian.org/debian forky/non-free-firmware Sources [7696 B] Get:20 https://deb.debian.org/debian sid/main Sources [11.2 MB] Get:21 https://deb.debian.org/debian sid/non-free-firmware Sources [9688 B] Get:22 https://deb.debian.org/debian experimental/main Sources [356 kB] Get:23 https://deb.debian.org/debian experimental/non-free-firmware Sources [3180 B] Fetched 34.0 MB in 32s (1069 kB/s) Reading package lists... 'https://deb.debian.org/debian/pool/main/m/macs/macs_3.0.2-2.dsc' macs_3.0.2-2.dsc 2177 SHA256:03cffd4bce72f07489f7a9159a6ea0d85989b010183b81f025c0e0f75559bffb 'https://deb.debian.org/debian/pool/main/m/macs/macs_3.0.2.orig.tar.gz' macs_3.0.2.orig.tar.gz 197484503 SHA256:33e877460f1b621ee85c78221b52d1e067b8f5aacdaf4d16bd887485bf636e08 'https://deb.debian.org/debian/pool/main/m/macs/macs_3.0.2-2.debian.tar.xz' macs_3.0.2-2.debian.tar.xz 1267996 SHA256:ca759f92e14f1c814d6a35a9a14ca21f41e662a07510dbca7e447d65bf476061 33e877460f1b621ee85c78221b52d1e067b8f5aacdaf4d16bd887485bf636e08 macs_3.0.2.orig.tar.gz ca759f92e14f1c814d6a35a9a14ca21f41e662a07510dbca7e447d65bf476061 macs_3.0.2-2.debian.tar.xz 03cffd4bce72f07489f7a9159a6ea0d85989b010183b81f025c0e0f75559bffb macs_3.0.2-2.dsc +------------------------------------------------------------------------------+ | Calling debrebuild Thu, 08 Jan 2026 06:29:19 +0000 | +------------------------------------------------------------------------------+ Rebuilding macs=3.0.2-2 in /srv/rebuilderd/tmp/rebuilderdNMzwn6/inputs now. + nice /usr/bin/debrebuild --buildresult=/srv/rebuilderd/tmp/rebuilderdNMzwn6/out --builder=sbuild+unshare --cache=/srv/rebuilderd/cache -- /srv/rebuilderd/tmp/rebuilderdNMzwn6/inputs/macs_3.0.2-2+b1_armhf.buildinfo /srv/rebuilderd/tmp/rebuilderdNMzwn6/inputs/macs_3.0.2-2+b1_armhf.buildinfo contains a GPG signature which has NOT been validated Using defined Build-Path: /build/reproducible-path/macs-3.0.2 I: verifying dsc... successful! Get:1 http://deb.debian.org/debian unstable InRelease [187 kB] Get:2 http://snapshot.debian.org/archive/debian/20251203T202911Z sid InRelease [176 kB] Get:3 http://snapshot.debian.org/archive/debian/20251221T203830Z sid InRelease [187 kB] Get:4 http://deb.debian.org/debian unstable/main armhf Packages [9690 kB] Get:5 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf Packages [9712 kB] Get:6 http://snapshot.debian.org/archive/debian/20251221T203830Z sid/main armhf Packages [9694 kB] Fetched 29.6 MB in 3s (10.9 MB/s) Reading package lists... W: http://snapshot.debian.org/archive/debian/20251203T202911Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted W: http://snapshot.debian.org/archive/debian/20251221T203830Z/dists/sid/InRelease: Loading /etc/apt/trusted.gpg from deprecated option Dir::Etc::Trusted Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libc6 armhf 2.41-12 [2249 kB] Fetched 2249 kB in 0s (86.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpoj_b7wot/libc6_2.41-12_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf gcc armhf 4:15.2.0-4 [5152 B] Fetched 5152 B in 0s (0 B/s) dpkg-name: info: moved 'gcc_4%3a15.2.0-4_armhf.deb' to '/srv/rebuilderd/tmp/tmpkr2cu6e_/gcc_15.2.0-4_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-jaraco.text all 4.0.0-1 [11.4 kB] Fetched 11.4 kB in 0s (617 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0f5jbtfg/python3-jaraco.text_4.0.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf autopoint all 0.23.2-1 [772 kB] Fetched 772 kB in 0s (65.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1nhid65r/autopoint_0.23.2-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libcrypt-dev armhf 1:4.5.1-1 [132 kB] Fetched 132 kB in 0s (7133 kB/s) dpkg-name: info: moved 'libcrypt-dev_1%3a4.5.1-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpnavviqgl/libcrypt-dev_4.5.1-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-inflect all 7.5.0-1 [33.0 kB] Fetched 33.0 kB in 0s (1645 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpf7y401to/python3-inflect_7.5.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3-packaging all 25.0-1 [56.6 kB] Fetched 56.6 kB in 0s (5605 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpg8t09y_z/python3-packaging_25.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libjansson4 armhf 2.14-2+b3 [35.5 kB] Fetched 35.5 kB in 0s (2405 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppcjdgwyn/libjansson4_2.14-2+b3_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libqhull-r8.0 armhf 2020.2-7 [220 kB] Fetched 220 kB in 0s (12.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprg0xi9oa/libqhull-r8.0_2020.2-7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3.14-dev armhf 3.14.0-5 [508 kB] Fetched 508 kB in 0s (21.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp78mldj2s/python3.14-dev_3.14.0-5_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-wheel all 0.46.1-2 [21.7 kB] Fetched 21.7 kB in 0s (1143 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphs462dj8/python3-wheel_0.46.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf dpkg-dev all 1.22.21 [1338 kB] Fetched 1338 kB in 0s (43.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpml5gzpmf/dpkg-dev_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf patch armhf 2.8-2 [128 kB] Fetched 128 kB in 0s (8002 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpircc83_h/patch_2.8-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf tzdata all 2025b-5 [260 kB] Fetched 260 kB in 0s (15.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbu7azus2/tzdata_2025b-5_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf zlib1g armhf 1:1.3.dfsg+really1.3.1-1+b1 [75.2 kB] Fetched 75.2 kB in 0s (4829 kB/s) dpkg-name: info: moved 'zlib1g_1%3a1.3.dfsg+really1.3.1-1+b1_armhf.deb' to '/srv/rebuilderd/tmp/tmpoha_ytgq/zlib1g_1.3.dfsg+really1.3.1-1+b1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf perl-modules-5.40 all 5.40.1-7 [3012 kB] Fetched 3012 kB in 0s (67.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp17egzpgj/perl-modules-5.40_5.40.1-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libgmp10 armhf 2:6.3.0+dfsg-5 [513 kB] Fetched 513 kB in 0s (22.4 MB/s) dpkg-name: info: moved 'libgmp10_2%3a6.3.0+dfsg-5_armhf.deb' to '/srv/rebuilderd/tmp/tmpdm3a3__r/libgmp10_6.3.0+dfsg-5_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Fetched 104 kB in 0s (6723 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpadp6pjyz/libarchive-zip-perl_1.68-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf base-passwd armhf 3.6.8 [53.4 kB] Fetched 53.4 kB in 0s (3480 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0by2qxi0/base-passwd_3.6.8_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf binutils-arm-linux-gnueabihf armhf 2.45.50.20251201-1 [865 kB] Fetched 865 kB in 0s (47.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjsyr7a8t/binutils-arm-linux-gnueabihf_2.45.50.20251201-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libelf1t64 armhf 0.194-1 [180 kB] Fetched 180 kB in 0s (11.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwr2qd_rd/libelf1t64_0.194-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libgdbm6t64 armhf 1.26-1 [74.4 kB] Fetched 74.4 kB in 0s (4163 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6i3z2pwo/libgdbm6t64_1.26-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libpcre2-8-0 armhf 10.46-1 [259 kB] Fetched 259 kB in 0s (16.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz6_4v18e/libpcre2-8-0_10.46-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf binutils armhf 2.45.50.20251201-1 [69.6 kB] Fetched 69.6 kB in 0s (4152 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp97baaw09/binutils_2.45.50.20251201-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libsystemd0 armhf 259~rc2-1 [433 kB] Fetched 433 kB in 0s (21.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprk1jhq7b/libsystemd0_259~rc2-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3-typing-extensions all 4.15.0-1 [92.4 kB] Fetched 92.4 kB in 0s (5764 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpi5dy4ez1/python3-typing-extensions_4.15.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3-sklearn all 1.7.2+dfsg-3 [2601 kB] Fetched 2601 kB in 0s (58.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5ssjn06i/python3-sklearn_1.7.2+dfsg-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf util-linux armhf 2.41.2-4 [1075 kB] Fetched 1075 kB in 0s (63.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp34i5_4o5/util-linux_2.41.2-4_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-all-dev armhf 3.13.9-2 [1072 B] Fetched 1072 B in 0s (73.5 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp36ghxmcd/python3-all-dev_3.13.9-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf g++-15 armhf 15.2.0-10 [24.8 kB] Fetched 24.8 kB in 0s (2257 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpburst4sw/g++-15_15.2.0-10_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3-autocommand all 2.2.2-3 [13.6 kB] Fetched 13.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpge3dfzli/python3-autocommand_2.2.2-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251221T203830Z sid/main armhf dh-python all 6.20251204.1 [114 kB] Fetched 114 kB in 0s (9807 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphavle_3f/dh-python_6.20251204.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3.14 armhf 3.14.0-5 [817 kB] Fetched 817 kB in 0s (43.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp36gde5le/python3.14_3.14.0-5_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libexpat1-dev armhf 2.7.3-1 [149 kB] Fetched 149 kB in 0s (8502 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgso49_0r/libexpat1-dev_2.7.3-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf g++ armhf 4:15.2.0-4 [1328 B] Fetched 1328 B in 0s (83.9 kB/s) dpkg-name: info: moved 'g++_4%3a15.2.0-4_armhf.deb' to '/srv/rebuilderd/tmp/tmp_7_yt0lg/g++_15.2.0-4_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf gcc-arm-linux-gnueabihf armhf 4:15.2.0-4 [1444 B] Fetched 1444 B in 0s (92.7 kB/s) dpkg-name: info: moved 'gcc-arm-linux-gnueabihf_4%3a15.2.0-4_armhf.deb' to '/srv/rebuilderd/tmp/tmpwiox6e1a/gcc-arm-linux-gnueabihf_15.2.0-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf cpp-15-arm-linux-gnueabihf armhf 15.2.0-10 [9389 kB] Fetched 9389 kB in 0s (187 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvi7t64f6/cpp-15-arm-linux-gnueabihf_15.2.0-10_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libsmartcols1 armhf 2.41.2-4 [129 kB] Fetched 129 kB in 0s (8101 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp81vd1wey/libsmartcols1_2.41.2-4_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf gettext-base armhf 0.23.2-1 [240 kB] Fetched 240 kB in 0s (15.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_6gen0ec/gettext-base_0.23.2-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Fetched 22.9 kB in 0s (1388 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnduycb6s/intltool-debian_0.35.0+20060710.6_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libctf-nobfd0 armhf 2.45.50.20251201-1 [130 kB] Fetched 130 kB in 0s (7444 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprod81bf6/libctf-nobfd0_2.45.50.20251201-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libdebhelper-perl all 13.28 [92.4 kB] Fetched 92.4 kB in 0s (8717 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplp_7sjcj/libdebhelper-perl_13.28_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Fetched 18.6 kB in 0s (1212 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqyygmdxm/python3-installer_0.7.0+dfsg1-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-jaraco.context all 6.0.1-1 [8276 B] Fetched 8276 B in 0s (547 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_e801vng/python3-jaraco.context_6.0.1-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libunistring5 armhf 1.3-2 [441 kB] Fetched 441 kB in 0s (21.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplbi_m789/libunistring5_1.3-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libuchardet0 armhf 0.0.8-2 [65.4 kB] Fetched 65.4 kB in 0s (3690 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcnid3q03/libuchardet0_0.0.8-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libffi8 armhf 3.5.2-2 [20.6 kB] Fetched 20.6 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9cujarzp/libffi8_3.5.2-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251221T203830Z sid/main armhf python3-scipy armhf 1.16.3-2 [17.1 MB] Fetched 17.1 MB in 0s (201 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpib_r1r9z/python3-scipy_1.16.3-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf ca-certificates all 20250419 [162 kB] Fetched 162 kB in 0s (16.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0ocoj2cs/ca-certificates_20250419_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3.14-minimal armhf 3.14.0-5 [1969 kB] Fetched 1969 kB in 0s (59.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9azzhf7r/python3.14-minimal_3.14.0-5_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Fetched 19.9 kB in 0s (1168 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnb1i4j7y/libfile-stripnondeterminism-perl_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf man-db armhf 2.13.1-1 [1432 kB] Fetched 1432 kB in 0s (89.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps7_r3omu/man-db_2.13.1-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3.13-dev armhf 3.13.9-1 [504 kB] Fetched 504 kB in 0s (31.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_tcml7xw/python3.13-dev_3.13.9-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf media-types all 14.0.0 [30.8 kB] Fetched 30.8 kB in 0s (1906 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7uihumh2/media-types_14.0.0_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf gcc-15-arm-linux-gnueabihf armhf 15.2.0-10 [18.2 MB] Fetched 18.2 MB in 0s (181 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5pxpb059/gcc-15-arm-linux-gnueabihf_15.2.0-10_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3-numpy-dev armhf 1:2.3.5+ds-2+b1 [133 kB] Fetched 133 kB in 0s (6173 kB/s) dpkg-name: info: moved 'python3-numpy-dev_1%3a2.3.5+ds-2+b1_armhf.deb' to '/srv/rebuilderd/tmp/tmp5ev18vow/python3-numpy-dev_2.3.5+ds-2+b1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libcrypt1 armhf 1:4.5.1-1 [102 kB] Fetched 102 kB in 0s (5821 kB/s) dpkg-name: info: moved 'libcrypt1_1%3a4.5.1-1_armhf.deb' to '/srv/rebuilderd/tmp/tmpsh1eipqt/libcrypt1_4.5.1-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf netbase all 6.5 [12.4 kB] Fetched 12.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_qcsogt3/netbase_6.5_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf debconf all 1.5.91 [121 kB] Fetched 121 kB in 0s (5895 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1cfv153q/debconf_1.5.91_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-all armhf 3.13.9-2 [1052 B] Fetched 1052 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp29n4li9f/python3-all_3.13.9-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf groff-base armhf 1.23.0-10 [1095 kB] Fetched 1095 kB in 0s (65.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp9riq5pd7/groff-base_1.23.0-10_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf perl-base armhf 5.40.1-7 [1525 kB] Fetched 1525 kB in 0s (108 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpm5id9tpv/perl-base_5.40.1-7_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf m4 armhf 1.4.20-2 [304 kB] Fetched 304 kB in 0s (26.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxnyfwgqx/m4_1.4.20-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf procps armhf 2:4.0.4-9 [868 kB] Fetched 868 kB in 0s (44.0 MB/s) dpkg-name: info: moved 'procps_2%3a4.0.4-9_armhf.deb' to '/srv/rebuilderd/tmp/tmps5zqwhde/procps_4.0.4-9_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libc6-dev armhf 2.41-12 [1327 kB] Fetched 1327 kB in 0s (47.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp40psykyy/libc6-dev_2.41-12_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libpython3.13 armhf 3.13.9-1 [1911 kB] Fetched 1911 kB in 0s (83.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmple26fuka/libpython3.13_3.13.9-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf sed armhf 4.9-2 [321 kB] Fetched 321 kB in 0s (30.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmb9_o4rc/sed_4.9-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf coreutils armhf 9.7-3 [2869 kB] Fetched 2869 kB in 0s (71.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpr4yrsvdp/coreutils_9.7-3_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libproc2-0 armhf 2:4.0.4-9 [56.8 kB] Fetched 56.8 kB in 0s (4991 kB/s) dpkg-name: info: moved 'libproc2-0_2%3a4.0.4-9_armhf.deb' to '/srv/rebuilderd/tmp/tmpplojnprn/libproc2-0_4.0.4-9_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3 armhf 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzjzahyvh/python3_3.13.9-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-more-itertools all 10.8.0-1 [71.7 kB] Fetched 71.7 kB in 0s (3469 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp61s1y2vk/python3-more-itertools_10.8.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf bc armhf 1.07.1-4 [97.8 kB] Fetched 97.8 kB in 0s (5258 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpum0qujim/bc_1.07.1-4_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf cpp-arm-linux-gnueabihf armhf 4:15.2.0-4 [5304 B] Fetched 5304 B in 0s (0 B/s) dpkg-name: info: moved 'cpp-arm-linux-gnueabihf_4%3a15.2.0-4_armhf.deb' to '/srv/rebuilderd/tmp/tmprksz8hvc/cpp-arm-linux-gnueabihf_15.2.0-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libncursesw6 armhf 6.5+20251123-1 [111 kB] Fetched 111 kB in 0s (7227 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpebgiv4hn/libncursesw6_6.5+20251123-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libc-bin armhf 2.41-12 [523 kB] Fetched 523 kB in 0s (35.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0li9mvem/libc-bin_2.41-12_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf gettext armhf 0.23.2-1 [1567 kB] Fetched 1567 kB in 0s (46.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps9ry47_h/gettext_0.23.2-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf rpcsvc-proto armhf 1.4.3-1 [58.7 kB] Fetched 58.7 kB in 0s (3333 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4k4fdmz1/rpcsvc-proto_1.4.3-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libpython3.13-dev armhf 3.13.9-1 [4064 kB] Fetched 4064 kB in 0s (72.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpszp4go5i/libpython3.13-dev_3.13.9-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-hmmlearn armhf 0.3.2-2+b3 [137 kB] Fetched 137 kB in 0s (12.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn_6qoulm/python3-hmmlearn_0.3.2-2+b3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libpython3.14 armhf 3.14.0-5 [1996 kB] Fetched 1996 kB in 0s (126 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpis30bp_m/libpython3.14_3.14.0-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libstdc++-15-dev armhf 15.2.0-10 [2444 kB] Fetched 2444 kB in 0s (71.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgwp23u7l/libstdc++-15-dev_15.2.0-10_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libuuid1 armhf 2.41.2-4 [37.4 kB] Fetched 37.4 kB in 0s (3143 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0lnrrx5y/libuuid1_2.41.2-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3.13-minimal armhf 3.13.9-1 [1884 kB] Fetched 1884 kB in 0s (52.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb3wcjc9d/python3.13-minimal_3.13.9-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libgdbm-compat4t64 armhf 1.26-1 [52.6 kB] Fetched 52.6 kB in 0s (2693 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_f8d3kqi/libgdbm-compat4t64_1.26-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf sysvinit-utils armhf 3.15-6 [33.7 kB] Fetched 33.7 kB in 0s (1903 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8mrymiu1/sysvinit-utils_3.15-6_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf g++-15-arm-linux-gnueabihf armhf 15.2.0-10 [10.2 MB] Fetched 10.2 MB in 0s (153 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmfkt4_jh/g++-15-arm-linux-gnueabihf_15.2.0-10_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf init-system-helpers all 1.69 [39.3 kB] Fetched 39.3 kB in 0s (2354 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1d6v7b0g/init-system-helpers_1.69_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libzstd1 armhf 1.5.7+dfsg-2 [269 kB] Fetched 269 kB in 0s (17.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5n46ys47/libzstd1_1.5.7+dfsg-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf build-essential armhf 12.12 [4624 B] Fetched 4624 B in 0s (428 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplgnj69xt/build-essential_12.12_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libpam-modules-bin armhf 1.7.0-5 [45.2 kB] Fetched 45.2 kB in 0s (4401 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkjd3unpw/libpam-modules-bin_1.7.0-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf binutils-common armhf 2.45.50.20251201-1 [2543 kB] Fetched 2543 kB in 0s (121 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptjgd445r/binutils-common_2.45.50.20251201-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libasan8 armhf 15.2.0-10 [2632 kB] Fetched 2632 kB in 0s (129 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbuy782pn/libasan8_15.2.0-10_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libcap2 armhf 1:2.75-10+b2 [24.9 kB] Fetched 24.9 kB in 0s (0 B/s) dpkg-name: info: moved 'libcap2_1%3a2.75-10+b2_armhf.deb' to '/srv/rebuilderd/tmp/tmpi72cmmc_/libcap2_2.75-10+b2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libpython3.14-stdlib armhf 3.14.0-5 [2117 kB] Fetched 2117 kB in 0s (60.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzs9sz_xn/libpython3.14-stdlib_3.14.0-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3.13 armhf 3.13.9-1 [764 kB] Fetched 764 kB in 0s (44.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeyiwrgf3/python3.13_3.13.9-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf ncurses-bin armhf 6.5+20251123-1 [435 kB] Fetched 435 kB in 0s (32.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnty_iwce/ncurses-bin_6.5+20251123-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-joblib all 1.5.2-1 [222 kB] Fetched 222 kB in 0s (10.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmb9p5ho0/python3-joblib_1.5.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libdpkg-perl all 1.22.21 [650 kB] Fetched 650 kB in 0s (25.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2_u32yve/libdpkg-perl_1.22.21_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf g++-arm-linux-gnueabihf armhf 4:15.2.0-4 [1200 B] Fetched 1200 B in 0s (70.5 kB/s) dpkg-name: info: moved 'g++-arm-linux-gnueabihf_4%3a15.2.0-4_armhf.deb' to '/srv/rebuilderd/tmp/tmpwxo8gnrq/g++-arm-linux-gnueabihf_15.2.0-4_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf help2man armhf 1.49.3 [198 kB] Fetched 198 kB in 0s (17.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpyave3sk4/help2man_1.49.3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libblkid1 armhf 2.41.2-4 [158 kB] Fetched 158 kB in 0s (14.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphrjciyg9/libblkid1_2.41.2-4_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libsqlite3-0 armhf 3.46.1-8 [808 kB] Fetched 808 kB in 0s (35.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpio1tc15z/libsqlite3-0_3.46.1-8_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf liblocale-gettext-perl armhf 1.07-7+b1 [14.7 kB] Fetched 14.7 kB in 0s (1172 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn6296v55/liblocale-gettext-perl_1.07-7+b1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libpython3-stdlib armhf 3.13.9-2 [10.5 kB] Fetched 10.5 kB in 0s (649 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb5snl93n/libpython3-stdlib_3.13.9-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libmagic1t64 armhf 1:5.46-5 [100 kB] Fetched 100 kB in 0s (5567 kB/s) dpkg-name: info: moved 'libmagic1t64_1%3a5.46-5_armhf.deb' to '/srv/rebuilderd/tmp/tmpru50ifwl/libmagic1t64_5.46-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libsframe2 armhf 2.45.50.20251201-1 [77.1 kB] Fetched 77.1 kB in 0s (4339 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpa5s1wlaq/libsframe2_2.45.50.20251201-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf linux-libc-dev all 6.17.10-1 [2560 kB] Fetched 2560 kB in 0s (58.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy5se35ao/linux-libc-dev_6.17.10-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf gzip armhf 1.13-1 [134 kB] Fetched 134 kB in 0s (7382 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps8i9wy2o/gzip_1.13-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-pkg-resources all 78.1.1-0.1 [224 kB] Fetched 224 kB in 0s (20.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmptu8j_miq/python3-pkg-resources_78.1.1-0.1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf openssl armhf 3.5.4-1 [1462 kB] Fetched 1462 kB in 0s (71.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsgf82u3e/openssl_3.5.4-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf bash armhf 5.3-1 [1485 kB] Fetched 1485 kB in 0s (66.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp3d0we_s/bash_5.3-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf grep armhf 3.12-1 [433 kB] Fetched 433 kB in 0s (20.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvaeyo82c/grep_3.12-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libjs-sphinxdoc all 8.2.3-10 [27.7 kB] Fetched 27.7 kB in 0s (1663 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvoi_m8mb/libjs-sphinxdoc_8.2.3-10_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-decorator all 5.2.1-2 [33.0 kB] Fetched 33.0 kB in 0s (1981 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp3a47le4u/python3-decorator_5.2.1-2_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251221T203830Z sid/main armhf pybuild-plugin-pyproject all 6.20251204.1 [12.3 kB] Fetched 12.3 kB in 0s (709 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxonlr55h/pybuild-plugin-pyproject_6.20251204.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libbinutils armhf 2.45.50.20251201-1 [342 kB] Fetched 342 kB in 0s (29.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplu6xs2cq/libbinutils_2.45.50.20251201-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf base-files armhf 14 [72.9 kB] Fetched 72.9 kB in 0s (4295 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2bu77yfa/base-files_14_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-typeguard all 4.4.4-1 [37.1 kB] Fetched 37.1 kB in 0s (2145 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpkz1supw7/python3-typeguard_4.4.4-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-threadpoolctl all 3.1.0-1 [21.2 kB] Fetched 21.2 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_ld115e3/python3-threadpoolctl_3.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libaudit-common all 1:4.1.2-1 [14.3 kB] Fetched 14.3 kB in 0s (937 kB/s) dpkg-name: info: moved 'libaudit-common_1%3a4.1.2-1_all.deb' to '/srv/rebuilderd/tmp/tmp_pbiqiro/libaudit-common_4.1.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libudev1 armhf 259~rc2-1 [147 kB] Fetched 147 kB in 0s (8496 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2w29_da5/libudev1_259~rc2-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf dash armhf 0.5.12-12 [90.4 kB] Fetched 90.4 kB in 0s (6045 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp7zol6_4d/dash_0.5.12-12_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libssl3t64 armhf 3.5.4-1 [1989 kB] Fetched 1989 kB in 0s (92.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_yzy7shl/libssl3t64_3.5.4-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libdebconfclient0 armhf 0.282 [10.6 kB] Fetched 10.6 kB in 0s (607 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmps_10j27j/libdebconfclient0_0.282_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libatomic1 armhf 15.2.0-10 [7144 B] Fetched 7144 B in 0s (474 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpup9typet/libatomic1_15.2.0-10_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libtool all 2.5.4-7 [540 kB] Fetched 540 kB in 0s (44.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpke7usfg5/libtool_2.5.4-7_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libpam0g armhf 1.7.0-5 [64.5 kB] Fetched 64.5 kB in 0s (4243 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0jzu7een/libpam0g_1.7.0-5_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf tar armhf 1.35+dfsg-3.1 [794 kB] Fetched 794 kB in 0s (34.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjz39eo9x/tar_1.35+dfsg-3.1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf debhelper all 13.28 [941 kB] Fetched 941 kB in 0s (50.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjeqiiocs/debhelper_13.28_all.deb' Downloading dependency 1 of 214: libc6:armhf=2.41-12 Downloading dependency 2 of 214: gcc:armhf=4:15.2.0-4 Downloading dependency 3 of 214: python3-jaraco.text:armhf=4.0.0-1 Downloading dependency 4 of 214: autopoint:armhf=0.23.2-1 Downloading dependency 5 of 214: libcrypt-dev:armhf=1:4.5.1-1 Downloading dependency 6 of 214: python3-inflect:armhf=7.5.0-1 Downloading dependency 7 of 214: python3-packaging:armhf=25.0-1 Downloading dependency 8 of 214: libjansson4:armhf=2.14-2+b3 Downloading dependency 9 of 214: libqhull-r8.0:armhf=2020.2-7 Downloading dependency 10 of 214: python3.14-dev:armhf=3.14.0-5 Downloading dependency 11 of 214: python3-wheel:armhf=0.46.1-2 Downloading dependency 12 of 214: dpkg-dev:armhf=1.22.21 Downloading dependency 13 of 214: patch:armhf=2.8-2 Downloading dependency 14 of 214: tzdata:armhf=2025b-5 Downloading dependency 15 of 214: zlib1g:armhf=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 16 of 214: perl-modules-5.40:armhf=5.40.1-7 Downloading dependency 17 of 214: libgmp10:armhf=2:6.3.0+dfsg-5 Downloading dependency 18 of 214: libarchive-zip-perl:armhf=1.68-1 Downloading dependency 19 of 214: base-passwd:armhf=3.6.8 Downloading dependency 20 of 214: binutils-arm-linux-gnueabihf:armhf=2.45.50.20251201-1 Downloading dependency 21 of 214: libelf1t64:armhf=0.194-1 Downloading dependency 22 of 214: libgdbm6t64:armhf=1.26-1 Downloading dependency 23 of 214: libpcre2-8-0:armhf=10.46-1 Downloading dependency 24 of 214: binutils:armhf=2.45.50.20251201-1 Downloading dependency 25 of 214: libsystemd0:armhf=259~rc2-1 Downloading dependency 26 of 214: 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libctf-nobfd0:armhf=2.45.50.20251201-1 Downloading dependency 42 of 214: libdebhelper-perl:armhf=13.28 Downloading dependency 43 of 214: python3-installer:armhf=0.7.0+dfsg1-3 Downloading dependency 44 of 214: python3-jaraco.context:armhf=6.0.1-1 Downloading dependency 45 of 214: libunistring5:armhf=1.3-2 Downloading dependency 46 of 214: libuchardet0:armhf=0.0.8-2 Downloading dependency 47 of 214: libffi8:armhf=3.5.2-2 Downloading dependency 48 of 214: python3-scipy:armhf=1.16.3-2 Downloading dependency 49 of 214: ca-certificates:armhf=20250419 Downloading dependency 50 of 214: python3.14-minimal:armhf=3.14.0-5 Downloading dependency 51 of 214: libfile-stripnondeterminism-perl:armhf=1.15.0-1 Downloading dependency 52 of 214: man-db:armhf=2.13.1-1 Downloading dependency 53 of 214: python3.13-dev:armhf=3.13.9-1 Downloading dependency 54 of 214: media-types:armhf=14.0.0 Downloading dependency 55 of 214: gcc-15-arm-linux-gnueabihf:armhf=15.2.0-10 Downloading dependency 56 of 214: python3-numpy-dev:armhf=1:2.3.5+ds-2+b1 Downloading dependency 57 of 214: libcrypt1:armhf=1:4.5.1-1 Downloading dependency 58 of 214: netbase:armhf=6.5 Downloading dependency 59 of 214: debconf:armhf=1.5.91 Downloading dependency 60 of 214: python3-all:armhf=3.13.9-2 Downloading dependency 61 of 214: groff-base:armhf=1.23.0-10 Downloading dependency 62 of 214: perl-base:armhf=5.40.1-7 Downloading dependency 63 of 214: m4:armhf=1.4.20-2 Downloading dependency 64 of 214: procps:armhf=2:4.0.4-9 Downloading dependency 65 of 214: libc6-dev:armhf=2.41-12 Downloading dependency 66 of 214: libpython3.13:armhf=3.13.9-1 Downloading dependency 67 of 214: sed:armhf=4.9-2 Downloading dependency 68 of 214: coreutils:armhf=9.7-3 Downloading dependency 69 of 214: libproc2-0:armhf=2:4.0.4-9 Downloading dependency 70 of 214: python3:armhf=3.13.9-2 Downloading dependency 71 of 214: python3-more-itertools:armhf=10.8.0-1 Downloading dependency 72 of 214: bc:armhf=1.07.1-4 Downloading dependency 73 of 214: 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libzstd1:armhf=1.5.7+dfsg-2 Downloading dependency 89 of 214: build-essential:armhf=12.12 Downloading dependency 90 of 214: libpam-modules-bin:armhf=1.7.0-5 Downloading dependency 91 of 214: binutils-common:armhf=2.45.50.20251201-1 Downloading dependency 92 of 214: libasan8:armhf=15.2.0-10 Downloading dependency 93 of 214: libcap2:armhf=1:2.75-10+b2 Downloading dependency 94 of 214: libpython3.14-stdlib:armhf=3.14.0-5 Downloading dependency 95 of 214: python3.13:armhf=3.13.9-1 Downloading dependency 96 of 214: ncurses-bin:armhf=6.5+20251123-1 Downloading dependency 97 of 214: python3-joblib:armhf=1.5.2-1 Downloading dependency 98 of 214: libdpkg-perl:armhf=1.22.21 Downloading dependency 99 of 214: g++-arm-linux-gnueabihf:armhf=4:15.2.0-4 Downloading dependency 100 of 214: help2man:armhf=1.49.3 Downloading dependency 101 of 214: libblkid1:armhf=2.41.2-4 Downloading dependency 102 of 214: libsqlite3-0:armhf=3.46.1-8 Downloading dependency 103 of 214: liblocale-gettext-perl:armhf=1.07-7+b1 Downloading dependency 104 of 214: libpython3-stdlib:armhf=3.13.9-2 Downloading dependency 105 of 214: libmagic1t64:armhf=1:5.46-5 Downloading dependency 106 of 214: libsframe2:armhf=2.45.50.20251201-1 Downloading dependency 107 of 214: linux-libc-dev:armhf=6.17.10-1 Downloading dependency 108 of 214: gzip:armhf=1.13-1 Downloading dependency 109 of 214: python3-pkg-resources:armhf=78.1.1-0.1 Downloading dependency 110 of 214: openssl:armhf=3.5.4-1 Downloading dependency 111 of 214: bash:armhf=5.3-1 Downloading dependency 112 of 214: grep:armhf=3.12-1 Downloading dependency 113 of 214: libjs-sphinxdoc:armhf=8.2.3-10 Downloading dependency 114 of 214: python3-decorator:armhf=5.2.1-2 Downloading dependency 115 of 214: pybuild-plugin-pyproject:armhf=6.20251204.1 Downloading dependency 116 of 214: libbinutils:armhf=2.45.50.20251201-1 Downloading dependency 117 of 214: base-files:armhf=14 Downloading dependency 118 of 214: python3-typeguard:armhf=4.4.4-1 Downloading dependency 119 of 214: python3-threadpoolctl:armhf=3.1.0-1 Downloading dependency 120 of 214: libaudit-common:armhf=1:4.1.2-1 Downloading dependency 121 of 214: libudev1:armhf=259~rc2-1 Downloading dependency 122 of 214: dash:armhf=0.5.12-12 Downloading dependency 123 of 214: libssl3t64:armhf=3.5.4-1 Downloading dependency 124 of 214: libdebconfclient0:armhf=0.282 Downloading dependency 125 of 214: libatomic1:armhf=15.2.0-10 Downloading dependency 126 of 214: libtool:armhf=2.5.4-7 Downloading dependency 127 of 214: libpam0g:armhf=1.7.0-5 Downloading dependency 128 of 214: tar:armhf=1.35+dfsg-3.1 Downloading dependency 129 of 214: debhelper:armhf=13.28 Downloading dependency 130 of 214: liblzma5:armhf=5.8.1-2Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf liblzma5 armhf 5.8.1-2 [297 kB] Fetched 297 kB in 0s (18.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1u6ynbfe/liblzma5_5.8.1-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf readline-common all 8.3-3 [74.8 kB] Fetched 74.8 kB in 0s (4740 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmphl55pzkg/readline-common_8.3-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3-pytest all 8.4.2-1 [266 kB] Fetched 266 kB in 0s (15.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph_na36zz/python3-pytest_8.4.2-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf cpp-15 armhf 15.2.0-10 [1280 B] Fetched 1280 B in 0s (85.1 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcpv3jtxq/cpp-15_15.2.0-10_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-jaraco.functools all 4.1.0-1 [12.0 kB] Fetched 12.0 kB in 0s (1142 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpwvr65vr0/python3-jaraco.functools_4.1.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3-numpy armhf 1:2.3.5+ds-2+b1 [4389 kB] Fetched 4389 kB in 0s (139 MB/s) dpkg-name: info: moved 'python3-numpy_1%3a2.3.5+ds-2+b1_armhf.deb' to '/srv/rebuilderd/tmp/tmp0xh0wlw8/python3-numpy_2.3.5+ds-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf bsdextrautils armhf 2.41.2-4 [90.5 kB] Fetched 90.5 kB in 0s (4908 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmekb5_3s/bsdextrautils_2.41.2-4_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf dh-autoreconf all 21 [12.2 kB] Fetched 12.2 kB in 0s (813 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprurxb1z2/dh-autoreconf_21_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf autoconf all 2.72-3.1 [494 kB] Fetched 494 kB in 0s (22.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8gbu9ccz/autoconf_2.72-3.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libtinfo6 armhf 6.5+20251123-1 [338 kB] Fetched 338 kB in 0s (16.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp1zl5v47a/libtinfo6_6.5+20251123-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-build all 1.2.2-4 [36.2 kB] Fetched 36.2 kB in 0s (2001 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpeielkv9b/python3-build_1.2.2-4_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libacl1 armhf 2.3.2-2+b1 [30.0 kB] Fetched 30.0 kB in 0s (2080 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmppmw1_fue/libacl1_2.3.2-2+b1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libcap-ng0 armhf 0.8.5-4+b2 [16.2 kB] Fetched 16.2 kB in 0s (1033 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjf_z93_3/libcap-ng0_0.8.5-4+b2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libattr1 armhf 1:2.5.2-3 [22.0 kB] Fetched 22.0 kB in 0s (1193 kB/s) dpkg-name: info: moved 'libattr1_1%3a2.5.2-3_armhf.deb' to '/srv/rebuilderd/tmp/tmpi8i59oea/libattr1_2.5.2-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libmount1 armhf 2.41.2-4 [192 kB] Fetched 192 kB in 0s (12.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpghj6a2eg/libmount1_2.41.2-4_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf mawk armhf 1.3.4.20250131-1 [131 kB] Fetched 131 kB in 0s (8542 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5aak8iau/mawk_1.3.4.20250131-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf ncurses-base all 6.5+20251123-1 [277 kB] Fetched 277 kB in 0s (22.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplmc0xybg/ncurses-base_6.5+20251123-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-minimal armhf 3.13.9-2 [27.5 kB] Fetched 27.5 kB in 0s (1721 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjnj6ih6t/python3-minimal_3.13.9-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libbz2-1.0 armhf 1.0.8-6 [35.0 kB] Fetched 35.0 kB in 0s (2764 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpjqv2ck_0/libbz2-1.0_1.0.8-6_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libaudit1 armhf 1:4.1.2-1+b1 [54.5 kB] Fetched 54.5 kB in 0s (3375 kB/s) dpkg-name: info: moved 'libaudit1_1%3a4.1.2-1+b1_armhf.deb' to '/srv/rebuilderd/tmp/tmpfdq_k_7q/libaudit1_4.1.2-1+b1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf perl armhf 5.40.1-7 [267 kB] Fetched 267 kB in 0s (16.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpcddt34t9/perl_5.40.1-7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libgfortran5 armhf 15.2.0-10 [281 kB] Fetched 281 kB in 0s (22.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6zotp_jo/libgfortran5_15.2.0-10_armhf.deb' dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzolrlmxq/python3-pip_25.3+dfsg-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-pip all 25.3+dfsg-1 [1384 kB] Fetched 1384 kB in 0s (39.3 MB/s) Get:1 http://deb.debian.org/debian unstable/main armhf automake all 1:1.18.1-3 [878 kB] Fetched 878 kB in 0s (39.3 MB/s) dpkg-name: info: moved 'automake_1%3a1.18.1-3_all.deb' to '/srv/rebuilderd/tmp/tmpjlcw1efu/automake_1.18.1-3_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf dpkg armhf 1.22.21 [1488 kB] Fetched 1488 kB in 0s (44.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpesvt6tlt/dpkg_1.22.21_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf bzip2 armhf 1.0.8-6 [39.4 kB] Fetched 39.4 kB in 0s (2559 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl5go18bd/bzip2_1.0.8-6_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf liblapack3 armhf 3.12.1-7 [1831 kB] Fetched 1831 kB in 0s (57.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqttu2rfi/liblapack3_3.12.1-7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libctf0 armhf 2.45.50.20251201-1 [62.5 kB] Fetched 62.5 kB in 0s (4170 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb3khwf26/libctf0_2.45.50.20251201-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libmagic-mgc armhf 1:5.46-5 [338 kB] Fetched 338 kB in 0s (17.3 MB/s) dpkg-name: info: moved 'libmagic-mgc_1%3a5.46-5_armhf.deb' to '/srv/rebuilderd/tmp/tmpbk31gmdv/libmagic-mgc_5.46-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libubsan1 armhf 15.2.0-10 [1075 kB] Fetched 1075 kB in 0s (50.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5bgqwovb/libubsan1_15.2.0-10_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Fetched 248 kB in 0s (13.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmponwxfwbe/po-debconf_1.0.21+nmu1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libcc1-0 armhf 15.2.0-10 [32.3 kB] Fetched 32.3 kB in 0s (2922 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp44deb6je/libcc1-0_15.2.0-10_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-dev armhf 3.13.9-2 [26.0 kB] Fetched 26.0 kB in 0s (1728 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpotqcinjd/python3-dev_3.13.9-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-zipp all 3.23.0-1 [11.0 kB] Fetched 11.0 kB in 0s (650 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvph0hpi9/python3-zipp_3.23.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libc-dev-bin armhf 2.41-12 [56.8 kB] Fetched 56.8 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpuhvxnogb/libc-dev-bin_2.41-12_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libdb5.3t64 armhf 5.3.28+dfsg2-10 [607 kB] Fetched 607 kB in 0s (27.9 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpz2zpsgvl/libdb5.3t64_5.3.28+dfsg2-10_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libgcc-s1 armhf 15.2.0-10 [36.8 kB] Fetched 36.8 kB in 0s (1981 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpnkmj8xiw/libgcc-s1_15.2.0-10_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf cpp armhf 4:15.2.0-4 [1572 B] Fetched 1572 B in 0s (89.3 kB/s) dpkg-name: info: moved 'cpp_4%3a15.2.0-4_armhf.deb' to '/srv/rebuilderd/tmp/tmpgsymxv2j/cpp_15.2.0-4_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Fetched 11.7 kB in 0s (687 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsuc1daxn/python3-pyproject-hooks_1.2.0-1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libgcc-15-dev armhf 15.2.0-10 [768 kB] Fetched 768 kB in 0s (30.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpijsu2bt7/libgcc-15-dev_15.2.0-10_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf file armhf 1:5.46-5 [42.8 kB] Fetched 42.8 kB in 0s (2440 kB/s) dpkg-name: info: moved 'file_1%3a5.46-5_armhf.deb' to '/srv/rebuilderd/tmp/tmpgdhcw6c7/file_5.46-5_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libmpc3 armhf 1.3.1-2 [43.8 kB] Fetched 43.8 kB in 0s (2331 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp8b87vxku/libmpc3_1.3.1-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf make armhf 4.4.1-3 [450 kB] Fetched 450 kB in 0s (26.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpbuac69rr/make_4.4.1-3_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf gcc-15-base armhf 15.2.0-10 [53.8 kB] Fetched 53.8 kB in 0s (3213 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpdqepd8_v/gcc-15-base_15.2.0-10_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libpython3.14-minimal armhf 3.14.0-5 [882 kB] Fetched 882 kB in 0s (48.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpl_4ey61h/libpython3.14-minimal_3.14.0-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1+b1 [905 kB] Fetched 905 kB in 0s (69.6 MB/s) dpkg-name: info: moved 'zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_armhf.deb' to '/srv/rebuilderd/tmp/tmp6honz767/zlib1g-dev_1.3.dfsg+really1.3.1-1+b1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libpython3-all-dev armhf 3.13.9-2 [1072 B] Fetched 1072 B in 0s (69.4 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvmho069t/libpython3-all-dev_3.13.9-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf sensible-utils all 0.0.26 [27.0 kB] Fetched 27.0 kB in 0s (2017 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpsa3q3je4/sensible-utils_0.0.26_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libseccomp2 armhf 2.6.0-2+b1 [49.6 kB] Fetched 49.6 kB in 0s (3521 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpfdwopbxz/libseccomp2_2.6.0-2+b1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf dh-strip-nondeterminism all 1.15.0-1 [8812 B] Fetched 8812 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmplge6015c/dh-strip-nondeterminism_1.15.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libselinux1 armhf 3.9-4+b1 [77.7 kB] Fetched 77.7 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpe8r2jmi2/libselinux1_3.9-4+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3-iniconfig all 2.1.0-1 [7432 B] Fetched 7432 B in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpiv5w96hp/python3-iniconfig_2.1.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf dwz armhf 0.16-2 [104 kB] Fetched 104 kB in 0s (6853 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp4nt2qjaz/dwz_0.16-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libpython3.13-stdlib armhf 3.13.9-1 [1839 kB] Fetched 1839 kB in 0s (57.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzcb918wh/libpython3.13-stdlib_3.13.9-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-cykhash armhf 2.0.0-3+b4 [601 kB] Fetched 601 kB in 0s (27.6 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5tl7i2o6/python3-cykhash_2.0.0-3+b4_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libpython3-dev armhf 3.13.9-2 [10.7 kB] Fetched 10.7 kB in 0s (849 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5e0idd5z/libpython3-dev_3.13.9-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libxml2-16 armhf 2.15.1+dfsg-2+b1 [552 kB] Fetched 552 kB in 0s (26.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp_udx65yl/libxml2-16_2.15.1+dfsg-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3-pluggy all 1.6.0-1 [27.1 kB] Fetched 27.1 kB in 0s (1615 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp2_d58ns0/python3-pluggy_1.6.0-1_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libreadline8t64 armhf 8.3-3 [156 kB] Fetched 156 kB in 0s (11.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpp6atpd7u/libreadline8t64_8.3-3_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libpam-runtime all 1.7.0-5 [249 kB] Fetched 249 kB in 0s (13.2 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzl266ale/libpam-runtime_1.7.0-5_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf python3-setuptools all 78.1.1-0.1 [738 kB] Fetched 738 kB in 0s (49.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprcr28drl/python3-setuptools_78.1.1-0.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf python3-pygments all 2.18.0+dfsg-2 [836 kB] Fetched 836 kB in 0s (29.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt5rnsvjd/python3-pygments_2.18.0+dfsg-2_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf findutils armhf 4.10.0-3 [687 kB] Fetched 687 kB in 0s (37.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpya_lu_cc/findutils_4.10.0-3_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libsimde-dev all 0.8.2-3 [467 kB] Fetched 467 kB in 0s (22.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqgicycsx/libsimde-dev_0.8.2-3_all.deb' Get:1 http://deb.debian.org/debian unstable/main armhf debianutils armhf 5.23.2 [91.4 kB] Fetched 91.4 kB in 0s (0 B/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmprb1ygwdw/debianutils_5.23.2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf hostname armhf 3.25 [10.0 kB] Fetched 10.0 kB in 0s (890 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpmd8g3f80/hostname_3.25_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf diffutils armhf 1:3.12-1 [392 kB] Fetched 392 kB in 0s (19.8 MB/s) dpkg-name: info: moved 'diffutils_1%3a3.12-1_armhf.deb' to '/srv/rebuilderd/tmp/tmphascy_p4/diffutils_3.12-1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf xz-utils armhf 5.8.1-2 [657 kB] Fetched 657 kB in 0s (26.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp5sl0m40s/xz-utils_5.8.1-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libmd0 armhf 1.1.0-2+b1 [31.9 kB] Fetched 31.9 kB in 0s (2651 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpo5j6enaq/libmd0_1.1.0-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf gcc-15 armhf 15.2.0-10 [498 kB] Fetched 498 kB in 0s (21.5 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpt2t4rg3y/gcc-15_15.2.0-10_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf cython3 armhf 3.1.6+dfsg-2+b1 [3086 kB] Fetched 3086 kB in 0s (121 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpn0_823gt/cython3_3.1.6+dfsg-2+b1_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libpython3.14-dev armhf 3.14.0-5 [4014 kB] Fetched 4014 kB in 0s (76.7 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpgihrh22g/libpython3.14-dev_3.14.0-5_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libpython3.13-minimal armhf 3.13.9-1 [850 kB] Fetched 850 kB in 0s (46.8 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpzquddfme/libpython3.13-minimal_3.13.9-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libisl23 armhf 0.27-1 [517 kB] Fetched 517 kB in 0s (24.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp0iq_ribp/libisl23_0.27-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libblas3 armhf 3.12.1-7 [116 kB] Fetched 116 kB in 0s (7955 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxma_fgjp/libblas3_3.12.1-7_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libstdc++6 armhf 15.2.0-10 [623 kB] Fetched 623 kB in 0s (48.3 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp545_56zi/libstdc++6_15.2.0-10_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf openssl-provider-legacy armhf 3.5.4-1 [301 kB] Fetched 301 kB in 0s (19.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp688a7nj2/openssl-provider-legacy_3.5.4-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libexpat1 armhf 2.7.3-1 [91.0 kB] Fetched 91.0 kB in 0s (5848 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpb0tuu4dn/libexpat1_2.7.3-1_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libpam-modules armhf 1.7.0-5 [164 kB] Fetched 164 kB in 0s (14.1 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpvleqkjjx/libpam-modules_1.7.0-5_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libpipeline1 armhf 1.5.8-2 [35.3 kB] Fetched 35.3 kB in 0s (2301 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpy8hfolxn/libpipeline1_1.5.8-2_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf autotools-dev all 20240727.1 [60.2 kB] Fetched 60.2 kB in 0s (5365 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmp6_mbqkx8/autotools-dev_20240727.1_all.deb' Get:1 http://snapshot.debian.org/archive/debian/20251203T202911Z sid/main armhf libgomp1 armhf 15.2.0-10 [115 kB] Fetched 115 kB in 0s (6549 kB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpqaxpwtg9/libgomp1_15.2.0-10_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libperl5.40 armhf 5.40.1-7 [3645 kB] Fetched 3645 kB in 0s (178 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmph4p7olhx/libperl5.40_5.40.1-7_armhf.deb' Get:1 http://deb.debian.org/debian unstable/main armhf libmpfr6 armhf 4.2.2-2 [605 kB] Fetched 605 kB in 0s (53.0 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxf7h864f/libmpfr6_4.2.2-2_armhf.deb' Get:1 http://snapshot.debian.org/archive/debian/20251221T203830Z sid/main armhf python3-sklearn-lib armhf 1.7.2+dfsg-3+b2 [3555 kB] Fetched 3555 kB in 0s (77.4 MB/s) dpkg-name: warning: skipping '/srv/rebuilderd/tmp/tmpxjsb20rn/python3-sklearn-lib_1.7.2+dfsg-3+b2_armhf.deb' dpkg-buildpackage: info: source package debootsnap-dummy dpkg-buildpackage: info: source version 1.0 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Equivs Dummy Package Generator dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/debootsnap-dummy/ dh_install dh_installdocs dh_installchangelogs dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'debootsnap-dummy' in '../debootsnap-dummy_1.0_all.deb'. dpkg-genbuildinfo --build=binary -O../debootsnap-dummy_1.0_arm64.buildinfo dpkg-genchanges --build=binary -O../debootsnap-dummy_1.0_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) The package has been created. Attention, the package has been created in the /srv/rebuilderd/tmp/tmpllna249z/cache directory, not in ".." as indicated by the message above! I: automatically chosen mode: unshare I: armhf is different from arm64 but can be executed natively I: using /srv/rebuilderd/tmp/mmdebstrap.QJ6gmknc4t as tempdir I: running --setup-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/setup00.sh /srv/rebuilderd/tmp/mmdebstrap.QJ6gmknc4t 127.0.0.1 - - [08/Jan/2026 06:31:16] code 404, message File not found 127.0.0.1 - - [08/Jan/2026 06:31:16] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:34165 ./ InRelease 127.0.0.1 - - [08/Jan/2026 06:31:16] "GET /./Release HTTP/1.1" 200 - Get:2 http://localhost:34165 ./ Release [462 B] 127.0.0.1 - - [08/Jan/2026 06:31:16] code 404, message File not found 127.0.0.1 - - [08/Jan/2026 06:31:16] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:34165 ./ Release.gpg 127.0.0.1 - - [08/Jan/2026 06:31:16] "GET /./Packages HTTP/1.1" 200 - Get:4 http://localhost:34165 ./ Packages [262 kB] Fetched 262 kB in 0s (7182 kB/s) Reading package lists... usr-is-merged found but not real -- not running merged-usr setup hook I: skipping apt-get update because it was already run I: downloading packages with apt... 127.0.0.1 - - [08/Jan/2026 06:31:16] "GET /./gcc-15-base_15.2.0-10_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:16] "GET /./libc6_2.41-12_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:16] "GET /./libgcc-s1_15.2.0-10_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:16] "GET /./mawk_1.3.4.20250131-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:16] "GET /./base-files_14_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:16] "GET /./libtinfo6_6.5%2b20251123-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:16] "GET /./debianutils_5.23.2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./bash_5.3-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libacl1_2.3.2-2%2bb1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libattr1_2.5.2-3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libcap2_2.75-10%2bb2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libgmp10_6.3.0%2bdfsg-5_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libpcre2-8-0_10.46-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libselinux1_3.9-4%2bb1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libzstd1_1.5.7%2bdfsg-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./zlib1g_1.3.dfsg%2breally1.3.1-1%2bb1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libssl3t64_3.5.4-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./openssl-provider-legacy_3.5.4-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libsystemd0_259%7erc2-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./coreutils_9.7-3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./dash_0.5.12-12_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./diffutils_3.12-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libbz2-1.0_1.0.8-6_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./liblzma5_5.8.1-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libmd0_1.1.0-2%2bb1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./tar_1.35%2bdfsg-3.1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./dpkg_1.22.21_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./findutils_4.10.0-3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./grep_3.12-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./gzip_1.13-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./hostname_3.25_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./ncurses-bin_6.5%2b20251123-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libcrypt1_4.5.1-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./perl-base_5.40.1-7_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./sed_4.9-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libaudit-common_4.1.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libcap-ng0_0.8.5-4%2bb2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libaudit1_4.1.2-1%2bb1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libdb5.3t64_5.3.28%2bdfsg2-10_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./debconf_1.5.91_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libpam0g_1.7.0-5_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libpam-modules-bin_1.7.0-5_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libpam-modules_1.7.0-5_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libpam-runtime_1.7.0-5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libblkid1_2.41.2-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libmount1_2.41.2-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libsmartcols1_2.41.2-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libudev1_259%7erc2-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libuuid1_2.41.2-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./util-linux_2.41.2-4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libdebconfclient0_0.282_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./base-passwd_3.6.8_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./init-system-helpers_1.69_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./libc-bin_2.41-12_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./ncurses-base_6.5%2b20251123-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:17] "GET /./sysvinit-utils_3.15-6_armhf.deb HTTP/1.1" 200 - I: extracting archives... I: running --extract-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/extract00.sh /srv/rebuilderd/tmp/mmdebstrap.QJ6gmknc4t 127.0.0.1 - - [08/Jan/2026 06:31:19] code 404, message File not found 127.0.0.1 - - [08/Jan/2026 06:31:19] "GET /./InRelease HTTP/1.1" 404 - Ign:1 http://localhost:34165 ./ InRelease 127.0.0.1 - - [08/Jan/2026 06:31:19] "GET /./Release HTTP/1.1" 304 - Hit:2 http://localhost:34165 ./ Release 127.0.0.1 - - [08/Jan/2026 06:31:19] code 404, message File not found 127.0.0.1 - - [08/Jan/2026 06:31:19] "GET /./Release.gpg HTTP/1.1" 404 - Ign:3 http://localhost:34165 ./ Release.gpg Reading package lists... usr-is-merged found but not real -- not running merged-usr extract hook I: installing essential packages... I: running --essential-hook directly: /usr/share/mmdebstrap/hooks/maybe-merged-usr/essential00.sh /srv/rebuilderd/tmp/mmdebstrap.QJ6gmknc4t usr-is-merged was not installed in a previous hook -- not running merged-usr essential hook I: installing remaining packages inside the chroot... 127.0.0.1 - - [08/Jan/2026 06:31:26] "GET /./liblocale-gettext-perl_1.07-7%2bb1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:26] "GET /./libexpat1_2.7.3-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:26] "GET /./libpython3.13-minimal_3.13.9-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:26] "GET /./python3.13-minimal_3.13.9-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:26] "GET /./python3-minimal_3.13.9-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:26] "GET /./media-types_14.0.0_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:26] "GET /./netbase_6.5_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:26] "GET /./tzdata_2025b-5_all.deb HTTP/1.1" 200 - 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127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3.13-dev_3.13.9-1_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./libjs-sphinxdoc_8.2.3-10_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-dev_3.13.9-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-all-dev_3.13.9-2_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./dh-python_6.20251204.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-installer_0.7.0%2bdfsg1-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-hmmlearn_0.3.2-2%2bb3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./help2man_1.49.3_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-pyproject-hooks_1.2.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-build_1.2.2-4_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./pybuild-plugin-pyproject_6.20251204.1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-iniconfig_2.1.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-pluggy_1.6.0-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-pygments_2.18.0%2bdfsg-2_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-pytest_8.4.2-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-pip_25.3%2bdfsg-1_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./python3-cykhash_2.0.0-3%2bb4_armhf.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./libsimde-dev_0.8.2-3_all.deb HTTP/1.1" 200 - 127.0.0.1 - - [08/Jan/2026 06:31:28] "GET /./debootsnap-dummy_1.0_all.deb HTTP/1.1" 200 - I: running --customize-hook directly: /srv/rebuilderd/tmp/tmpllna249z/apt_install.sh /srv/rebuilderd/tmp/mmdebstrap.QJ6gmknc4t Reading package lists... Building dependency tree... Reading state information... libc6 is already the newest version (2.41-12). gcc is already the newest version (4:15.2.0-4). gcc set to manually installed. python3-jaraco.text is already the newest version (4.0.0-1). python3-jaraco.text set to manually installed. autopoint is already the newest version (0.23.2-1). autopoint set to manually installed. libcrypt-dev is already the newest version (1:4.5.1-1). libcrypt-dev set to manually installed. python3-inflect is already the newest version (7.5.0-1). python3-inflect set to manually installed. python3-packaging is already the newest version (25.0-1). python3-packaging set to manually installed. libjansson4 is already the newest version (2.14-2+b3). libjansson4 set to manually installed. libqhull-r8.0 is already the newest version (2020.2-7). libqhull-r8.0 set to manually installed. python3.14-dev is already the newest version (3.14.0-5). python3.14-dev set to manually installed. python3-wheel is already the newest version (0.46.1-2). python3-wheel set to manually installed. dpkg-dev is already the newest version (1.22.21). dpkg-dev set to manually installed. patch is already the newest version (2.8-2). patch set to manually installed. tzdata is already the newest version (2025b-5). tzdata set to manually installed. zlib1g is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). perl-modules-5.40 is already the newest version (5.40.1-7). perl-modules-5.40 set to manually installed. libgmp10 is already the newest version (2:6.3.0+dfsg-5). libarchive-zip-perl is already the newest version (1.68-1). libarchive-zip-perl set to manually installed. base-passwd is already the newest version (3.6.8). binutils-arm-linux-gnueabihf is already the newest version (2.45.50.20251201-1). binutils-arm-linux-gnueabihf set to manually installed. libelf1t64 is already the newest version (0.194-1). libelf1t64 set to manually installed. libgdbm6t64 is already the newest version (1.26-1). libgdbm6t64 set to manually installed. libpcre2-8-0 is already the newest version (10.46-1). binutils is already the newest version (2.45.50.20251201-1). binutils set to manually installed. libsystemd0 is already the newest version (259~rc2-1). python3-typing-extensions is already the newest version (4.15.0-1). python3-typing-extensions set to manually installed. python3-sklearn is already the newest version (1.7.2+dfsg-3). python3-sklearn set to manually installed. util-linux is already the newest version (2.41.2-4). python3-all-dev is already the newest version (3.13.9-2). python3-all-dev set to manually installed. g++-15 is already the newest version (15.2.0-10). g++-15 set to manually installed. python3-autocommand is already the newest version (2.2.2-3). python3-autocommand set to manually installed. dh-python is already the newest version (6.20251204.1). dh-python set to manually installed. python3.14 is already the newest version (3.14.0-5). python3.14 set to manually installed. libexpat1-dev is already the newest version (2.7.3-1). libexpat1-dev set to manually installed. g++ is already the newest version (4:15.2.0-4). g++ set to manually installed. gcc-arm-linux-gnueabihf is already the newest version (4:15.2.0-4). gcc-arm-linux-gnueabihf set to manually installed. cpp-15-arm-linux-gnueabihf is already the newest version (15.2.0-10). cpp-15-arm-linux-gnueabihf set to manually installed. libsmartcols1 is already the newest version (2.41.2-4). gettext-base is already the newest version (0.23.2-1). gettext-base set to manually installed. intltool-debian is already the newest version (0.35.0+20060710.6). intltool-debian set to manually installed. libctf-nobfd0 is already the newest version (2.45.50.20251201-1). libctf-nobfd0 set to manually installed. libdebhelper-perl is already the newest version (13.28). libdebhelper-perl set to manually installed. python3-installer is already the newest version (0.7.0+dfsg1-3). python3-installer set to manually installed. python3-jaraco.context is already the newest version (6.0.1-1). python3-jaraco.context set to manually installed. libunistring5 is already the newest version (1.3-2). libunistring5 set to manually installed. libuchardet0 is already the newest version (0.0.8-2). libuchardet0 set to manually installed. libffi8 is already the newest version (3.5.2-2). libffi8 set to manually installed. python3-scipy is already the newest version (1.16.3-2). python3-scipy set to manually installed. ca-certificates is already the newest version (20250419). ca-certificates set to manually installed. python3.14-minimal is already the newest version (3.14.0-5). python3.14-minimal set to manually installed. libfile-stripnondeterminism-perl is already the newest version (1.15.0-1). libfile-stripnondeterminism-perl set to manually installed. man-db is already the newest version (2.13.1-1). man-db set to manually installed. python3.13-dev is already the newest version (3.13.9-1). python3.13-dev set to manually installed. media-types is already the newest version (14.0.0). media-types set to manually installed. gcc-15-arm-linux-gnueabihf is already the newest version (15.2.0-10). gcc-15-arm-linux-gnueabihf set to manually installed. python3-numpy-dev is already the newest version (1:2.3.5+ds-2+b1). python3-numpy-dev set to manually installed. libcrypt1 is already the newest version (1:4.5.1-1). netbase is already the newest version (6.5). netbase set to manually installed. debconf is already the newest version (1.5.91). python3-all is already the newest version (3.13.9-2). python3-all set to manually installed. groff-base is already the newest version (1.23.0-10). groff-base set to manually installed. perl-base is already the newest version (5.40.1-7). m4 is already the newest version (1.4.20-2). m4 set to manually installed. procps is already the newest version (2:4.0.4-9). procps set to manually installed. libc6-dev is already the newest version (2.41-12). libc6-dev set to manually installed. libpython3.13 is already the newest version (3.13.9-1). libpython3.13 set to manually installed. sed is already the newest version (4.9-2). coreutils is already the newest version (9.7-3). libproc2-0 is already the newest version (2:4.0.4-9). libproc2-0 set to manually installed. python3 is already the newest version (3.13.9-2). python3 set to manually installed. python3-more-itertools is already the newest version (10.8.0-1). python3-more-itertools set to manually installed. bc is already the newest version (1.07.1-4). bc set to manually installed. cpp-arm-linux-gnueabihf is already the newest version (4:15.2.0-4). cpp-arm-linux-gnueabihf set to manually installed. libncursesw6 is already the newest version (6.5+20251123-1). libncursesw6 set to manually installed. libc-bin is already the newest version (2.41-12). gettext is already the newest version (0.23.2-1). gettext set to manually installed. rpcsvc-proto is already the newest version (1.4.3-1). rpcsvc-proto set to manually installed. libpython3.13-dev is already the newest version (3.13.9-1). libpython3.13-dev set to manually installed. python3-hmmlearn is already the newest version (0.3.2-2+b3). python3-hmmlearn set to manually installed. libpython3.14 is already the newest version (3.14.0-5). libpython3.14 set to manually installed. libstdc++-15-dev is already the newest version (15.2.0-10). libstdc++-15-dev set to manually installed. libuuid1 is already the newest version (2.41.2-4). python3.13-minimal is already the newest version (3.13.9-1). python3.13-minimal set to manually installed. libgdbm-compat4t64 is already the newest version (1.26-1). libgdbm-compat4t64 set to manually installed. sysvinit-utils is already the newest version (3.15-6). g++-15-arm-linux-gnueabihf is already the newest version (15.2.0-10). g++-15-arm-linux-gnueabihf set to manually installed. init-system-helpers is already the newest version (1.69). libzstd1 is already the newest version (1.5.7+dfsg-2). build-essential is already the newest version (12.12). build-essential set to manually installed. libpam-modules-bin is already the newest version (1.7.0-5). binutils-common is already the newest version (2.45.50.20251201-1). binutils-common set to manually installed. libasan8 is already the newest version (15.2.0-10). libasan8 set to manually installed. libcap2 is already the newest version (1:2.75-10+b2). libpython3.14-stdlib is already the newest version (3.14.0-5). libpython3.14-stdlib set to manually installed. python3.13 is already the newest version (3.13.9-1). python3.13 set to manually installed. ncurses-bin is already the newest version (6.5+20251123-1). python3-joblib is already the newest version (1.5.2-1). python3-joblib set to manually installed. libdpkg-perl is already the newest version (1.22.21). libdpkg-perl set to manually installed. g++-arm-linux-gnueabihf is already the newest version (4:15.2.0-4). g++-arm-linux-gnueabihf set to manually installed. help2man is already the newest version (1.49.3). help2man set to manually installed. libblkid1 is already the newest version (2.41.2-4). libsqlite3-0 is already the newest version (3.46.1-8). libsqlite3-0 set to manually installed. liblocale-gettext-perl is already the newest version (1.07-7+b1). liblocale-gettext-perl set to manually installed. libpython3-stdlib is already the newest version (3.13.9-2). libpython3-stdlib set to manually installed. libmagic1t64 is already the newest version (1:5.46-5). libmagic1t64 set to manually installed. libsframe2 is already the newest version (2.45.50.20251201-1). libsframe2 set to manually installed. linux-libc-dev is already the newest version (6.17.10-1). linux-libc-dev set to manually installed. gzip is already the newest version (1.13-1). python3-pkg-resources is already the newest version (78.1.1-0.1). python3-pkg-resources set to manually installed. openssl is already the newest version (3.5.4-1). openssl set to manually installed. bash is already the newest version (5.3-1). grep is already the newest version (3.12-1). libjs-sphinxdoc is already the newest version (8.2.3-10). libjs-sphinxdoc set to manually installed. python3-decorator is already the newest version (5.2.1-2). python3-decorator set to manually installed. pybuild-plugin-pyproject is already the newest version (6.20251204.1). pybuild-plugin-pyproject set to manually installed. libbinutils is already the newest version (2.45.50.20251201-1). libbinutils set to manually installed. base-files is already the newest version (14). python3-typeguard is already the newest version (4.4.4-1). python3-typeguard set to manually installed. python3-threadpoolctl is already the newest version (3.1.0-1). python3-threadpoolctl set to manually installed. libaudit-common is already the newest version (1:4.1.2-1). libudev1 is already the newest version (259~rc2-1). dash is already the newest version (0.5.12-12). libssl3t64 is already the newest version (3.5.4-1). libdebconfclient0 is already the newest version (0.282). libatomic1 is already the newest version (15.2.0-10). libatomic1 set to manually installed. libtool is already the newest version (2.5.4-7). libtool set to manually installed. libpam0g is already the newest version (1.7.0-5). tar is already the newest version (1.35+dfsg-3.1). debhelper is already the newest version (13.28). debhelper set to manually installed. liblzma5 is already the newest version (5.8.1-2). readline-common is already the newest version (8.3-3). readline-common set to manually installed. python3-pytest is already the newest version (8.4.2-1). python3-pytest set to manually installed. cpp-15 is already the newest version (15.2.0-10). cpp-15 set to manually installed. python3-jaraco.functools is already the newest version (4.1.0-1). python3-jaraco.functools set to manually installed. python3-numpy is already the newest version (1:2.3.5+ds-2+b1). python3-numpy set to manually installed. bsdextrautils is already the newest version (2.41.2-4). bsdextrautils set to manually installed. dh-autoreconf is already the newest version (21). dh-autoreconf set to manually installed. autoconf is already the newest version (2.72-3.1). autoconf set to manually installed. libtinfo6 is already the newest version (6.5+20251123-1). python3-build is already the newest version (1.2.2-4). python3-build set to manually installed. libacl1 is already the newest version (2.3.2-2+b1). libcap-ng0 is already the newest version (0.8.5-4+b2). libattr1 is already the newest version (1:2.5.2-3). libmount1 is already the newest version (2.41.2-4). mawk is already the newest version (1.3.4.20250131-1). ncurses-base is already the newest version (6.5+20251123-1). python3-minimal is already the newest version (3.13.9-2). python3-minimal set to manually installed. libbz2-1.0 is already the newest version (1.0.8-6). libaudit1 is already the newest version (1:4.1.2-1+b1). perl is already the newest version (5.40.1-7). perl set to manually installed. libgfortran5 is already the newest version (15.2.0-10). libgfortran5 set to manually installed. python3-pip is already the newest version (25.3+dfsg-1). python3-pip set to manually installed. automake is already the newest version (1:1.18.1-3). automake set to manually installed. dpkg is already the newest version (1.22.21). bzip2 is already the newest version (1.0.8-6). bzip2 set to manually installed. liblapack3 is already the newest version (3.12.1-7). liblapack3 set to manually installed. libctf0 is already the newest version (2.45.50.20251201-1). libctf0 set to manually installed. libmagic-mgc is already the newest version (1:5.46-5). libmagic-mgc set to manually installed. libubsan1 is already the newest version (15.2.0-10). libubsan1 set to manually installed. po-debconf is already the newest version (1.0.21+nmu1). po-debconf set to manually installed. libcc1-0 is already the newest version (15.2.0-10). libcc1-0 set to manually installed. python3-dev is already the newest version (3.13.9-2). python3-dev set to manually installed. python3-zipp is already the newest version (3.23.0-1). python3-zipp set to manually installed. libc-dev-bin is already the newest version (2.41-12). libc-dev-bin set to manually installed. libdb5.3t64 is already the newest version (5.3.28+dfsg2-10). libgcc-s1 is already the newest version (15.2.0-10). cpp is already the newest version (4:15.2.0-4). cpp set to manually installed. python3-pyproject-hooks is already the newest version (1.2.0-1). python3-pyproject-hooks set to manually installed. libgcc-15-dev is already the newest version (15.2.0-10). libgcc-15-dev set to manually installed. file is already the newest version (1:5.46-5). file set to manually installed. libmpc3 is already the newest version (1.3.1-2). libmpc3 set to manually installed. make is already the newest version (4.4.1-3). make set to manually installed. gcc-15-base is already the newest version (15.2.0-10). libpython3.14-minimal is already the newest version (3.14.0-5). libpython3.14-minimal set to manually installed. zlib1g-dev is already the newest version (1:1.3.dfsg+really1.3.1-1+b1). zlib1g-dev set to manually installed. libpython3-all-dev is already the newest version (3.13.9-2). libpython3-all-dev set to manually installed. sensible-utils is already the newest version (0.0.26). sensible-utils set to manually installed. libseccomp2 is already the newest version (2.6.0-2+b1). libseccomp2 set to manually installed. dh-strip-nondeterminism is already the newest version (1.15.0-1). dh-strip-nondeterminism set to manually installed. libselinux1 is already the newest version (3.9-4+b1). python3-iniconfig is already the newest version (2.1.0-1). python3-iniconfig set to manually installed. dwz is already the newest version (0.16-2). dwz set to manually installed. libpython3.13-stdlib is already the newest version (3.13.9-1). libpython3.13-stdlib set to manually installed. python3-cykhash is already the newest version (2.0.0-3+b4). python3-cykhash set to manually installed. libpython3-dev is already the newest version (3.13.9-2). libpython3-dev set to manually installed. libxml2-16 is already the newest version (2.15.1+dfsg-2+b1). libxml2-16 set to manually installed. python3-pluggy is already the newest version (1.6.0-1). python3-pluggy set to manually installed. libreadline8t64 is already the newest version (8.3-3). libreadline8t64 set to manually installed. libpam-runtime is already the newest version (1.7.0-5). python3-setuptools is already the newest version (78.1.1-0.1). python3-setuptools set to manually installed. python3-pygments is already the newest version (2.18.0+dfsg-2). python3-pygments set to manually installed. findutils is already the newest version (4.10.0-3). libsimde-dev is already the newest version (0.8.2-3). libsimde-dev set to manually installed. debianutils is already the newest version (5.23.2). hostname is already the newest version (3.25). diffutils is already the newest version (1:3.12-1). xz-utils is already the newest version (5.8.1-2). xz-utils set to manually installed. libmd0 is already the newest version (1.1.0-2+b1). gcc-15 is already the newest version (15.2.0-10). gcc-15 set to manually installed. cython3 is already the newest version (3.1.6+dfsg-2+b1). cython3 set to manually installed. libpython3.14-dev is already the newest version (3.14.0-5). libpython3.14-dev set to manually installed. libpython3.13-minimal is already the newest version (3.13.9-1). libpython3.13-minimal set to manually installed. libisl23 is already the newest version (0.27-1). libisl23 set to manually installed. libblas3 is already the newest version (3.12.1-7). libblas3 set to manually installed. libstdc++6 is already the newest version (15.2.0-10). libstdc++6 set to manually installed. openssl-provider-legacy is already the newest version (3.5.4-1). libexpat1 is already the newest version (2.7.3-1). libexpat1 set to manually installed. libpam-modules is already the newest version (1.7.0-5). libpipeline1 is already the newest version (1.5.8-2). libpipeline1 set to manually installed. autotools-dev is already the newest version (20240727.1). autotools-dev set to manually installed. libgomp1 is already the newest version (15.2.0-10). libgomp1 set to manually installed. libperl5.40 is already the newest version (5.40.1-7). libperl5.40 set to manually installed. libmpfr6 is already the newest version (4.2.2-2). libmpfr6 set to manually installed. python3-sklearn-lib is already the newest version (1.7.2+dfsg-3+b2). python3-sklearn-lib set to manually installed. 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg -r debootsnap-dummy' exec /srv/rebuilderd/tmp/mmdebstrap.QJ6gmknc4t (Reading database ... 24042 files and directories currently installed.) Removing debootsnap-dummy (1.0) ... I: running --customize-hook in shell: sh -c 'chroot "$1" dpkg-query --showformat '${binary:Package}=${Version}\n' --show > "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.QJ6gmknc4t I: running special hook: download /pkglist ./pkglist I: running --customize-hook in shell: sh -c 'rm "$1/pkglist"' exec /srv/rebuilderd/tmp/mmdebstrap.QJ6gmknc4t I: running special hook: upload sources.list /etc/apt/sources.list I: waiting for background processes to finish... I: cleaning package lists and apt cache... I: skipping cleanup/reproducible as requested I: creating tarball... I: done I: removing tempdir /srv/rebuilderd/tmp/mmdebstrap.QJ6gmknc4t... I: success in 80.3186 seconds Downloading dependency 131 of 214: readline-common:armhf=8.3-3 Downloading dependency 132 of 214: python3-pytest:armhf=8.4.2-1 Downloading dependency 133 of 214: cpp-15:armhf=15.2.0-10 Downloading dependency 134 of 214: python3-jaraco.functools:armhf=4.1.0-1 Downloading dependency 135 of 214: python3-numpy:armhf=1:2.3.5+ds-2+b1 Downloading dependency 136 of 214: bsdextrautils:armhf=2.41.2-4 Downloading dependency 137 of 214: dh-autoreconf:armhf=21 Downloading dependency 138 of 214: autoconf:armhf=2.72-3.1 Downloading dependency 139 of 214: libtinfo6:armhf=6.5+20251123-1 Downloading dependency 140 of 214: python3-build:armhf=1.2.2-4 Downloading dependency 141 of 214: libacl1:armhf=2.3.2-2+b1 Downloading dependency 142 of 214: libcap-ng0:armhf=0.8.5-4+b2 Downloading dependency 143 of 214: libattr1:armhf=1:2.5.2-3 Downloading dependency 144 of 214: libmount1:armhf=2.41.2-4 Downloading dependency 145 of 214: mawk:armhf=1.3.4.20250131-1 Downloading dependency 146 of 214: ncurses-base:armhf=6.5+20251123-1 Downloading dependency 147 of 214: python3-minimal:armhf=3.13.9-2 Downloading dependency 148 of 214: libbz2-1.0:armhf=1.0.8-6 Downloading dependency 149 of 214: libaudit1:armhf=1:4.1.2-1+b1 Downloading dependency 150 of 214: perl:armhf=5.40.1-7 Downloading dependency 151 of 214: libgfortran5:armhf=15.2.0-10 Downloading dependency 152 of 214: python3-pip:armhf=25.3+dfsg-1 Downloading dependency 153 of 214: automake:armhf=1:1.18.1-3 Downloading dependency 154 of 214: dpkg:armhf=1.22.21 Downloading dependency 155 of 214: bzip2:armhf=1.0.8-6 Downloading dependency 156 of 214: liblapack3:armhf=3.12.1-7 Downloading dependency 157 of 214: libctf0:armhf=2.45.50.20251201-1 Downloading dependency 158 of 214: libmagic-mgc:armhf=1:5.46-5 Downloading dependency 159 of 214: libubsan1:armhf=15.2.0-10 Downloading dependency 160 of 214: po-debconf:armhf=1.0.21+nmu1 Downloading dependency 161 of 214: libcc1-0:armhf=15.2.0-10 Downloading dependency 162 of 214: python3-dev:armhf=3.13.9-2 Downloading dependency 163 of 214: python3-zipp:armhf=3.23.0-1 Downloading dependency 164 of 214: libc-dev-bin:armhf=2.41-12 Downloading dependency 165 of 214: libdb5.3t64:armhf=5.3.28+dfsg2-10 Downloading dependency 166 of 214: libgcc-s1:armhf=15.2.0-10 Downloading dependency 167 of 214: cpp:armhf=4:15.2.0-4 Downloading dependency 168 of 214: python3-pyproject-hooks:armhf=1.2.0-1 Downloading dependency 169 of 214: libgcc-15-dev:armhf=15.2.0-10 Downloading dependency 170 of 214: file:armhf=1:5.46-5 Downloading dependency 171 of 214: libmpc3:armhf=1.3.1-2 Downloading dependency 172 of 214: make:armhf=4.4.1-3 Downloading dependency 173 of 214: gcc-15-base:armhf=15.2.0-10 Downloading dependency 174 of 214: libpython3.14-minimal:armhf=3.14.0-5 Downloading dependency 175 of 214: zlib1g-dev:armhf=1:1.3.dfsg+really1.3.1-1+b1 Downloading dependency 176 of 214: libpython3-all-dev:armhf=3.13.9-2 Downloading dependency 177 of 214: sensible-utils:armhf=0.0.26 Downloading dependency 178 of 214: libseccomp2:armhf=2.6.0-2+b1 Downloading dependency 179 of 214: dh-strip-nondeterminism:armhf=1.15.0-1 Downloading dependency 180 of 214: libselinux1:armhf=3.9-4+b1 Downloading dependency 181 of 214: python3-iniconfig:armhf=2.1.0-1 Downloading dependency 182 of 214: dwz:armhf=0.16-2 Downloading dependency 183 of 214: libpython3.13-stdlib:armhf=3.13.9-1 Downloading dependency 184 of 214: python3-cykhash:armhf=2.0.0-3+b4 Downloading dependency 185 of 214: libpython3-dev:armhf=3.13.9-2 Downloading dependency 186 of 214: libxml2-16:armhf=2.15.1+dfsg-2+b1 Downloading dependency 187 of 214: python3-pluggy:armhf=1.6.0-1 Downloading dependency 188 of 214: libreadline8t64:armhf=8.3-3 Downloading dependency 189 of 214: libpam-runtime:armhf=1.7.0-5 Downloading dependency 190 of 214: python3-setuptools:armhf=78.1.1-0.1 Downloading dependency 191 of 214: python3-pygments:armhf=2.18.0+dfsg-2 Downloading dependency 192 of 214: findutils:armhf=4.10.0-3 Downloading dependency 193 of 214: libsimde-dev:armhf=0.8.2-3 Downloading dependency 194 of 214: debianutils:armhf=5.23.2 Downloading dependency 195 of 214: hostname:armhf=3.25 Downloading dependency 196 of 214: diffutils:armhf=1:3.12-1 Downloading dependency 197 of 214: xz-utils:armhf=5.8.1-2 Downloading dependency 198 of 214: libmd0:armhf=1.1.0-2+b1 Downloading dependency 199 of 214: gcc-15:armhf=15.2.0-10 Downloading dependency 200 of 214: cython3:armhf=3.1.6+dfsg-2+b1 Downloading dependency 201 of 214: libpython3.14-dev:armhf=3.14.0-5 Downloading dependency 202 of 214: libpython3.13-minimal:armhf=3.13.9-1 Downloading dependency 203 of 214: libisl23:armhf=0.27-1 Downloading dependency 204 of 214: libblas3:armhf=3.12.1-7 Downloading dependency 205 of 214: libstdc++6:armhf=15.2.0-10 Downloading dependency 206 of 214: openssl-provider-legacy:armhf=3.5.4-1 Downloading dependency 207 of 214: libexpat1:armhf=2.7.3-1 Downloading dependency 208 of 214: libpam-modules:armhf=1.7.0-5 Downloading dependency 209 of 214: libpipeline1:armhf=1.5.8-2 Downloading dependency 210 of 214: autotools-dev:armhf=20240727.1 Downloading dependency 211 of 214: libgomp1:armhf=15.2.0-10 Downloading dependency 212 of 214: libperl5.40:armhf=5.40.1-7 Downloading dependency 213 of 214: libmpfr6:armhf=4.2.2-2 Downloading dependency 214 of 214: python3-sklearn-lib:armhf=1.7.2+dfsg-3+b2 env --chdir=/srv/rebuilderd/tmp/rebuilderdNMzwn6/out DEB_BUILD_OPTIONS=parallel=8 LANG=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 SOURCE_DATE_EPOCH=1764973651 SBUILD_CONFIG=/srv/rebuilderd/tmp/debrebuildrA4kNt/debrebuild.sbuildrc.wuDtvQWPdPTz sbuild --build=armhf --host=armhf --no-source --arch-any --no-arch-all --binNMU-changelog= macs (3.0.2-2+b1) sid; urgency=low, binary-only=yes * Binary-only non-maintainer upload for armhf; no source changes. * Rebuild with Python 3.14 as supported -- arm Build Daemon (arm-ubc-05) Fri, 05 Dec 2025 22:27:31 +0000 --chroot=/srv/rebuilderd/tmp/debrebuildrA4kNt/debrebuild.tar.LJ1egrvUrwUy --chroot-mode=unshare --dist=unstable --no-run-lintian --no-run-piuparts --no-run-autopkgtest --no-apt-update --no-apt-upgrade --no-apt-distupgrade --verbose --nolog --bd-uninstallable-explainer= --build-path=/build/reproducible-path --dsc-dir=macs-3.0.2 /srv/rebuilderd/tmp/rebuilderdNMzwn6/inputs/macs_3.0.2-2.dsc I: consider moving your ~/.sbuildrc to /srv/rebuilderd/.config/sbuild/config.pl The Debian buildds switched to the "unshare" backend and sbuild will default to it in the future. To start using "unshare" add this to your `~/.config/sbuild/config.pl`: $chroot_mode = "unshare"; If you want to keep the old "schroot" mode even in the future, add the following to your `~/.config/sbuild/config.pl`: $chroot_mode = "schroot"; $schroot = "schroot"; sbuild: warning: descr(l1): found blank line where expected first heading sbuild (Debian sbuild) 0.89.3+deb13u1 (16 August 2025) on codethink01-arm64 +==============================================================================+ | macs 3.0.2-2+b1 (armhf) Thu, 08 Jan 2026 06:32:37 +0000 | +==============================================================================+ Package: macs Version: 3.0.2-2+b1 Source Version: 3.0.2-2 Distribution: unstable Machine Architecture: arm64 Host Architecture: armhf Build Architecture: armhf Build Type: any I: No tarballs found in /srv/rebuilderd/.cache/sbuild I: Unpacking /srv/rebuilderd/tmp/debrebuildrA4kNt/debrebuild.tar.LJ1egrvUrwUy to /srv/rebuilderd/tmp/tmp.sbuild.IcyKZ2wypB... I: Setting up the chroot... I: Creating chroot session... I: Setting up log color... I: Setting up apt archive... +------------------------------------------------------------------------------+ | Fetch source files Thu, 08 Jan 2026 06:32:44 +0000 | +------------------------------------------------------------------------------+ Local sources ------------- /srv/rebuilderd/tmp/rebuilderdNMzwn6/inputs/macs_3.0.2-2.dsc exists in /srv/rebuilderd/tmp/rebuilderdNMzwn6/inputs; copying to chroot sbuild: warning: descr(l1): found blank line where expected first heading +------------------------------------------------------------------------------+ | Install package build dependencies Thu, 08 Jan 2026 06:32:47 +0000 | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, python3-cykhash, python3-hmmlearn, libsimde-dev, cython3, help2man, procps, bc, build-essential Filtered Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, python3-cykhash, python3-hmmlearn, libsimde-dev, cython3, help2man, procps, bc, build-essential dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/build/reproducible-path/resolver-Yrx39C/apt_archive/sbuild-build-depends-main-dummy.deb'. Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies +------------------------------------------------------------------------------+ | Check architectures Thu, 08 Jan 2026 06:32:52 +0000 | +------------------------------------------------------------------------------+ Arch check ok (armhf included in any) +------------------------------------------------------------------------------+ | Build environment Thu, 08 Jan 2026 06:32:53 +0000 | +------------------------------------------------------------------------------+ Kernel: Linux 6.12.57+deb13-cloud-arm64 #1 SMP Debian 6.12.57-1 (2025-11-05) arm64 (aarch64) Toolchain package versions: binutils_2.45.50.20251201-1 dpkg-dev_1.22.21 g++-15_15.2.0-10 gcc-15_15.2.0-10 libc6-dev_2.41-12 libstdc++-15-dev_15.2.0-10 libstdc++6_15.2.0-10 linux-libc-dev_6.17.10-1 Package versions: autoconf_2.72-3.1 automake_1:1.18.1-3 autopoint_0.23.2-1 autotools-dev_20240727.1 base-files_14 base-passwd_3.6.8 bash_5.3-1 bc_1.07.1-4 binutils_2.45.50.20251201-1 binutils-arm-linux-gnueabihf_2.45.50.20251201-1 binutils-common_2.45.50.20251201-1 bsdextrautils_2.41.2-4 build-essential_12.12 bzip2_1.0.8-6 ca-certificates_20250419 coreutils_9.7-3 cpp_4:15.2.0-4 cpp-15_15.2.0-10 cpp-15-arm-linux-gnueabihf_15.2.0-10 cpp-arm-linux-gnueabihf_4:15.2.0-4 cython3_3.1.6+dfsg-2+b1 dash_0.5.12-12 debconf_1.5.91 debhelper_13.28 debianutils_5.23.2 dh-autoreconf_21 dh-python_6.20251204.1 dh-strip-nondeterminism_1.15.0-1 diffutils_1:3.12-1 dpkg_1.22.21 dpkg-dev_1.22.21 dwz_0.16-2 file_1:5.46-5 findutils_4.10.0-3 g++_4:15.2.0-4 g++-15_15.2.0-10 g++-15-arm-linux-gnueabihf_15.2.0-10 g++-arm-linux-gnueabihf_4:15.2.0-4 gcc_4:15.2.0-4 gcc-15_15.2.0-10 gcc-15-arm-linux-gnueabihf_15.2.0-10 gcc-15-base_15.2.0-10 gcc-arm-linux-gnueabihf_4:15.2.0-4 gettext_0.23.2-1 gettext-base_0.23.2-1 grep_3.12-1 groff-base_1.23.0-10 gzip_1.13-1 help2man_1.49.3 hostname_3.25 init-system-helpers_1.69 intltool-debian_0.35.0+20060710.6 libacl1_2.3.2-2+b1 libarchive-zip-perl_1.68-1 libasan8_15.2.0-10 libatomic1_15.2.0-10 libattr1_1:2.5.2-3 libaudit-common_1:4.1.2-1 libaudit1_1:4.1.2-1+b1 libbinutils_2.45.50.20251201-1 libblas3_3.12.1-7 libblkid1_2.41.2-4 libbz2-1.0_1.0.8-6 libc-bin_2.41-12 libc-dev-bin_2.41-12 libc6_2.41-12 libc6-dev_2.41-12 libcap-ng0_0.8.5-4+b2 libcap2_1:2.75-10+b2 libcc1-0_15.2.0-10 libcrypt-dev_1:4.5.1-1 libcrypt1_1:4.5.1-1 libctf-nobfd0_2.45.50.20251201-1 libctf0_2.45.50.20251201-1 libdb5.3t64_5.3.28+dfsg2-10 libdebconfclient0_0.282 libdebhelper-perl_13.28 libdpkg-perl_1.22.21 libelf1t64_0.194-1 libexpat1_2.7.3-1 libexpat1-dev_2.7.3-1 libffi8_3.5.2-2 libfile-stripnondeterminism-perl_1.15.0-1 libgcc-15-dev_15.2.0-10 libgcc-s1_15.2.0-10 libgdbm-compat4t64_1.26-1 libgdbm6t64_1.26-1 libgfortran5_15.2.0-10 libgmp10_2:6.3.0+dfsg-5 libgomp1_15.2.0-10 libisl23_0.27-1 libjansson4_2.14-2+b3 libjs-sphinxdoc_8.2.3-10 liblapack3_3.12.1-7 liblocale-gettext-perl_1.07-7+b1 liblzma5_5.8.1-2 libmagic-mgc_1:5.46-5 libmagic1t64_1:5.46-5 libmd0_1.1.0-2+b1 libmount1_2.41.2-4 libmpc3_1.3.1-2 libmpfr6_4.2.2-2 libncursesw6_6.5+20251123-1 libpam-modules_1.7.0-5 libpam-modules-bin_1.7.0-5 libpam-runtime_1.7.0-5 libpam0g_1.7.0-5 libpcre2-8-0_10.46-1 libperl5.40_5.40.1-7 libpipeline1_1.5.8-2 libproc2-0_2:4.0.4-9 libpython3-all-dev_3.13.9-2 libpython3-dev_3.13.9-2 libpython3-stdlib_3.13.9-2 libpython3.13_3.13.9-1 libpython3.13-dev_3.13.9-1 libpython3.13-minimal_3.13.9-1 libpython3.13-stdlib_3.13.9-1 libpython3.14_3.14.0-5 libpython3.14-dev_3.14.0-5 libpython3.14-minimal_3.14.0-5 libpython3.14-stdlib_3.14.0-5 libqhull-r8.0_2020.2-7 libreadline8t64_8.3-3 libseccomp2_2.6.0-2+b1 libselinux1_3.9-4+b1 libsframe2_2.45.50.20251201-1 libsimde-dev_0.8.2-3 libsmartcols1_2.41.2-4 libsqlite3-0_3.46.1-8 libssl3t64_3.5.4-1 libstdc++-15-dev_15.2.0-10 libstdc++6_15.2.0-10 libsystemd0_259~rc2-1 libtinfo6_6.5+20251123-1 libtool_2.5.4-7 libubsan1_15.2.0-10 libuchardet0_0.0.8-2 libudev1_259~rc2-1 libunistring5_1.3-2 libuuid1_2.41.2-4 libxml2-16_2.15.1+dfsg-2+b1 libzstd1_1.5.7+dfsg-2 linux-libc-dev_6.17.10-1 m4_1.4.20-2 make_4.4.1-3 man-db_2.13.1-1 mawk_1.3.4.20250131-1 media-types_14.0.0 ncurses-base_6.5+20251123-1 ncurses-bin_6.5+20251123-1 netbase_6.5 openssl_3.5.4-1 openssl-provider-legacy_3.5.4-1 patch_2.8-2 perl_5.40.1-7 perl-base_5.40.1-7 perl-modules-5.40_5.40.1-7 po-debconf_1.0.21+nmu1 procps_2:4.0.4-9 pybuild-plugin-pyproject_6.20251204.1 python3_3.13.9-2 python3-all_3.13.9-2 python3-all-dev_3.13.9-2 python3-autocommand_2.2.2-3 python3-build_1.2.2-4 python3-cykhash_2.0.0-3+b4 python3-decorator_5.2.1-2 python3-dev_3.13.9-2 python3-hmmlearn_0.3.2-2+b3 python3-inflect_7.5.0-1 python3-iniconfig_2.1.0-1 python3-installer_0.7.0+dfsg1-3 python3-jaraco.context_6.0.1-1 python3-jaraco.functools_4.1.0-1 python3-jaraco.text_4.0.0-1 python3-joblib_1.5.2-1 python3-minimal_3.13.9-2 python3-more-itertools_10.8.0-1 python3-numpy_1:2.3.5+ds-2+b1 python3-numpy-dev_1:2.3.5+ds-2+b1 python3-packaging_25.0-1 python3-pip_25.3+dfsg-1 python3-pkg-resources_78.1.1-0.1 python3-pluggy_1.6.0-1 python3-pygments_2.18.0+dfsg-2 python3-pyproject-hooks_1.2.0-1 python3-pytest_8.4.2-1 python3-scipy_1.16.3-2 python3-setuptools_78.1.1-0.1 python3-sklearn_1.7.2+dfsg-3 python3-sklearn-lib_1.7.2+dfsg-3+b2 python3-threadpoolctl_3.1.0-1 python3-typeguard_4.4.4-1 python3-typing-extensions_4.15.0-1 python3-wheel_0.46.1-2 python3-zipp_3.23.0-1 python3.13_3.13.9-1 python3.13-dev_3.13.9-1 python3.13-minimal_3.13.9-1 python3.14_3.14.0-5 python3.14-dev_3.14.0-5 python3.14-minimal_3.14.0-5 readline-common_8.3-3 rpcsvc-proto_1.4.3-1 sed_4.9-2 sensible-utils_0.0.26 sysvinit-utils_3.15-6 tar_1.35+dfsg-3.1 tzdata_2025b-5 util-linux_2.41.2-4 xz-utils_5.8.1-2 zlib1g_1:1.3.dfsg+really1.3.1-1+b1 zlib1g-dev_1:1.3.dfsg+really1.3.1-1+b1 +------------------------------------------------------------------------------+ | Build Thu, 08 Jan 2026 06:32:53 +0000 | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: macs Binary: macs Architecture: any Version: 3.0.2-2 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe , Andreas Tille Homepage: https://github.com/taoliu/MACS/ Standards-Version: 4.7.2 Vcs-Browser: https://salsa.debian.org/med-team/macs Vcs-Git: https://salsa.debian.org/med-team/macs.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, python3-cykhash, python3-hmmlearn, libsimde-dev, cython3, help2man, procps, bc Package-List: macs deb science optional arch=any Checksums-Sha1: add8dce2a95862e95e94ada63a56f1035023163b 197484503 macs_3.0.2.orig.tar.gz 9a9ffd8e45bb719d88f6d1e38ad11ec7f3f3fb5d 1267996 macs_3.0.2-2.debian.tar.xz Checksums-Sha256: 33e877460f1b621ee85c78221b52d1e067b8f5aacdaf4d16bd887485bf636e08 197484503 macs_3.0.2.orig.tar.gz ca759f92e14f1c814d6a35a9a14ca21f41e662a07510dbca7e447d65bf476061 1267996 macs_3.0.2-2.debian.tar.xz Files: 2f1ec9ab99edddaf84958b65c305532e 197484503 macs_3.0.2.orig.tar.gz 5c2807358c8525971807a4e4f9c6bc80 1267996 macs_3.0.2-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEEj23hBDd/OxHnQXSHMfMURUShdBoFAmkrCEkRHHRjaGV0QGRl Ymlhbi5vcmcACgkQMfMURUShdBqMOBAAr8mjY0+hQR6afZDB9N6l1c/tbzEOvqQl 6aWPK9pzrvTrGsQF0mxOJSwv+y4K6EhRilO7mj4FxbXM6R1x044Xiuk64WqVegmB UGKaBWKbiciLITmGhiICaAihdIGYDkOefaRHHqcKsATt0WQIErFUXsOaHh2l0+ve my4KK+Oy/weohpGku4rjzZOMb2ykgTh7EczH4yEtAE97eDYdcNzdfqE/FXagGQY5 IM6+VJnEJaPc/hjPAtdNeP3q2UGCbFIOORcR7ElrlM1H0CFL8k+8e7nSeklOcRSE Od3s9E6upUDylxk9KOojNE4IUkWbxQlRpkBa8RN8AFml5GAg/he5xDxbXzJDEuJG 2gj8VJUxhoI7BtPKjy/VD9O2HzCv3i/s29LoOUtMk0vDLIYl6rd1ytFR5URaUwj0 IVWVziOz+j+Ax426R53pYc1mv0FyyGpLQEKN5fYincq35TTvpF2GCgW94QyQ2HEB /BvR696NWS8lOfPPSeYYu/XNGB2keKWzcqKKV04mEpOAE5zEKZCesLAq3lCI4dER Hw6w++IMIVEbhJZ9sUx+YJlSjjzqXLg4FkEsHqqS3D0IKaQSDX90vTB9WfK5B0fg 5pxgFLVizPsXactCBJtXBUvSpD7YnpZ0RjTfhGpCN457qhs8fyZH8ZpSm3fuAOBb R48zpUETLW0= =c3K0 -----END PGP SIGNATURE----- dpkg-source: warning: cannot verify inline signature for ./macs_3.0.2-2.dsc: unsupported subcommand dpkg-source: info: extracting macs in /build/reproducible-path/macs-3.0.2 dpkg-source: info: unpacking macs_3.0.2.orig.tar.gz dpkg-source: info: unpacking macs_3.0.2-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying keep_debug dpkg-source: info: applying simde.patch dpkg-source: info: applying long_is_not_defined.patch Check disk space ---------------- Sufficient free space for build Hack binNMU version ------------------- Created changelog entry for binNMU version 3.0.2-2+b1 User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=8 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LC_COLLATE=C.UTF-8 LC_CTYPE=C.UTF-8 LOGNAME=sbuild PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SHELL=/bin/sh SOURCE_DATE_EPOCH=1764973651 USER=sbuild dpkg-buildpackage ----------------- Command: dpkg-buildpackage --sanitize-env -us -uc -B dpkg-buildpackage: info: source package macs dpkg-buildpackage: info: source version 3.0.2-2+b1 dpkg-buildpackage: info: source distribution sid dpkg-buildpackage: info: source changed by arm Build Daemon (arm-ubc-05) dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf dpkg-source: info: using options from macs-3.0.2/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/macs-3.0.2' rm -Rf test/macs3.0.2-2+b1* test/speedtest* rm -f debian/*.1 debian/*-man-include make[1]: Leaving directory '/build/reproducible-path/macs-3.0.2' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary-arch dh binary-arch --buildsystem=pybuild dh_update_autotools_config -a -O--buildsystem=pybuild dh_autoreconf -a -O--buildsystem=pybuild dh_auto_configure -a -O--buildsystem=pybuild debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/macs-3.0.2' for pyx in $(find MACS3/ -name "*.pyx"); do \ rm -f ${pyx%%.pyx}.{h,c}; touch ${pyx}; done dh_auto_build I: pybuild plugin_pyproject:131: Building wheel for python3.14 with "build" module I: pybuild base:317: python3.14 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3 * Building wheel... Compiling MACS3/Signal/HMMR_EM.pyx because it changed. Compiling MACS3/Signal/HMMR_Signal_Processing.pyx because it changed. Compiling MACS3/Signal/HMMR_HMM.pyx because it changed. Compiling MACS3/Signal/Prob.pyx because it changed. Compiling MACS3/Signal/Region.pyx because it changed. Compiling MACS3/Signal/Pileup.pyx because it changed. Compiling MACS3/Signal/PileupV2.pyx because it changed. Compiling MACS3/Signal/PeakModel.pyx because it changed. Compiling MACS3/Signal/PeakDetect.pyx because it changed. Compiling MACS3/Signal/SignalProcessing.pyx because it changed. Compiling MACS3/Signal/FixWidthTrack.pyx because it changed. Compiling MACS3/Signal/PairedEndTrack.pyx because it changed. Compiling MACS3/Signal/BedGraph.pyx because it changed. Compiling MACS3/Signal/ScoreTrack.pyx because it changed. Compiling MACS3/Signal/CallPeakUnit.pyx because it changed. Compiling MACS3/Signal/VariantStat.pyx because it changed. Compiling MACS3/Signal/ReadAlignment.pyx because it changed. Compiling MACS3/Signal/RACollection.pyx because it changed. Compiling MACS3/Signal/UnitigRACollection.pyx because it changed. Compiling MACS3/Signal/PosReadsInfo.pyx because it changed. Compiling MACS3/Signal/PeakVariants.pyx because it changed. Compiling MACS3/IO/Parser.pyx because it changed. Compiling MACS3/IO/PeakIO.pyx because it changed. Compiling MACS3/IO/BedGraphIO.pyx because it changed. Compiling MACS3/IO/BAM.pyx because it changed. [ 1/25] Cythonizing MACS3/IO/BAM.pyx [ 2/25] Cythonizing MACS3/IO/BedGraphIO.pyx [ 3/25] Cythonizing MACS3/IO/Parser.pyx [ 4/25] Cythonizing MACS3/IO/PeakIO.pyx [ 5/25] Cythonizing MACS3/Signal/BedGraph.pyx [ 6/25] Cythonizing MACS3/Signal/CallPeakUnit.pyx [ 7/25] Cythonizing MACS3/Signal/FixWidthTrack.pyx [ 8/25] Cythonizing MACS3/Signal/HMMR_EM.pyx [ 9/25] Cythonizing MACS3/Signal/HMMR_HMM.pyx [10/25] Cythonizing MACS3/Signal/HMMR_Signal_Processing.pyx [11/25] Cythonizing MACS3/Signal/PairedEndTrack.pyx [12/25] Cythonizing MACS3/Signal/PeakDetect.pyx [13/25] Cythonizing MACS3/Signal/PeakModel.pyx [14/25] Cythonizing MACS3/Signal/PeakVariants.pyx [15/25] Cythonizing MACS3/Signal/Pileup.pyx [16/25] Cythonizing MACS3/Signal/PileupV2.pyx [17/25] Cythonizing MACS3/Signal/PosReadsInfo.pyx [18/25] Cythonizing MACS3/Signal/Prob.pyx [19/25] Cythonizing MACS3/Signal/RACollection.pyx [20/25] Cythonizing MACS3/Signal/ReadAlignment.pyx [21/25] Cythonizing MACS3/Signal/Region.pyx [22/25] Cythonizing MACS3/Signal/ScoreTrack.pyx [23/25] Cythonizing MACS3/Signal/SignalProcessing.pyx [24/25] Cythonizing MACS3/Signal/UnitigRACollection.pyx [25/25] Cythonizing MACS3/Signal/VariantStat.pyx /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib.linux-armv7l-cpython-314/MACS3 copying MACS3/__init__.py -> build/lib.linux-armv7l-cpython-314/MACS3 creating build/lib.linux-armv7l-cpython-314/MACS3/IO copying MACS3/IO/__init__.py -> build/lib.linux-armv7l-cpython-314/MACS3/IO copying MACS3/IO/OutputWriter.py -> build/lib.linux-armv7l-cpython-314/MACS3/IO creating build/lib.linux-armv7l-cpython-314/MACS3/Signal copying MACS3/Signal/__init__.py -> build/lib.linux-armv7l-cpython-314/MACS3/Signal creating build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/cmbreps_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/predictd_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/bdgdiff_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/refinepeak_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/bdgopt_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/bdgpeakcall_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/callpeak_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/bdgbroadcall_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/hmmratac_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/pileup_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/filterdup_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/diffpeak_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/bdgcmp_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/__init__.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/randsample_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands copying MACS3/Commands/callvar_cmd.py -> build/lib.linux-armv7l-cpython-314/MACS3/Commands creating build/lib.linux-armv7l-cpython-314/MACS3/Utilities copying MACS3/Utilities/OptValidator.py -> build/lib.linux-armv7l-cpython-314/MACS3/Utilities copying MACS3/Utilities/__init__.py -> build/lib.linux-armv7l-cpython-314/MACS3/Utilities copying MACS3/Utilities/Logger.py -> build/lib.linux-armv7l-cpython-314/MACS3/Utilities copying MACS3/Utilities/Constants.py -> build/lib.linux-armv7l-cpython-314/MACS3/Utilities running build_ext building 'MACS3.Signal.HMMR_EM' extension creating build/temp.linux-armv7l-cpython-314/MACS3/Signal arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/HMMR_EM.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/HMMR_EM.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/HMMR_EM.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/HMMR_EM.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.HMMR_Signal_Processing' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/HMMR_Signal_Processing.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/HMMR_Signal_Processing.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/HMMR_Signal_Processing.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/HMMR_Signal_Processing.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.HMMR_HMM' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/HMMR_HMM.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/HMMR_HMM.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/HMMR_HMM.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/HMMR_HMM.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.Prob' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/Prob.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/Prob.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/Prob.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/Prob.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.Region' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/Region.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/Region.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/Region.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/Region.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.Pileup' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/Pileup.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/Pileup.o -w -O3 arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/cPosValCalculation.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/cPosValCalculation.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/Pileup.o build/temp.linux-armv7l-cpython-314/MACS3/Signal/cPosValCalculation.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/Pileup.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.PileupV2' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PileupV2.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/PileupV2.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/PileupV2.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/PileupV2.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.PeakModel' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PeakModel.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/PeakModel.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/PeakModel.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/PeakModel.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.PeakDetect' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.14 -c MACS3/Signal/PeakDetect.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/PeakDetect.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/PeakDetect.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/PeakDetect.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.SignalProcessing' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/SignalProcessing.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/SignalProcessing.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/SignalProcessing.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/SignalProcessing.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.FixWidthTrack' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/FixWidthTrack.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/FixWidthTrack.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/FixWidthTrack.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/FixWidthTrack.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.PairedEndTrack' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PairedEndTrack.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/PairedEndTrack.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/PairedEndTrack.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/PairedEndTrack.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.BedGraph' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/BedGraph.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/BedGraph.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/BedGraph.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/BedGraph.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.ScoreTrack' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/ScoreTrack.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/ScoreTrack.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/ScoreTrack.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/ScoreTrack.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.CallPeakUnit' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/CallPeakUnit.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/CallPeakUnit.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/CallPeakUnit.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/CallPeakUnit.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.VariantStat' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/VariantStat.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/VariantStat.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/VariantStat.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/VariantStat.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.ReadAlignment' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/ReadAlignment.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/ReadAlignment.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/ReadAlignment.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/ReadAlignment.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.RACollection' extension creating build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/Signal/RACollection.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/RACollection.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/Signal/swalign.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/swalign.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/bfc.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/bfc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/bseq.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/bseq.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/bubble.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/bubble.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/htab.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/htab.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/ksw.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/ksw.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/kthread.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/kthread.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/mag.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/mag.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/misc.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/misc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/mrope.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/mrope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/rld0.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/rld0.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/rle.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/rle.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/rope.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/rope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.14 -c MACS3/fermi-lite/unitig.c -o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/unitig.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/RACollection.o build/temp.linux-armv7l-cpython-314/MACS3/Signal/swalign.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/bfc.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/bseq.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/bubble.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/htab.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/ksw.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/kthread.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/mag.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/misc.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/mrope.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/rld0.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/rle.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/rope.o build/temp.linux-armv7l-cpython-314/MACS3/fermi-lite/unitig.o -L/usr/lib/arm-linux-gnueabihf -lm -lz -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/RACollection.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.UnitigRACollection' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/UnitigRACollection.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/UnitigRACollection.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/UnitigRACollection.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/UnitigRACollection.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.PosReadsInfo' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PosReadsInfo.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/PosReadsInfo.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/PosReadsInfo.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/PosReadsInfo.cpython-314-arm-linux-gnueabihf.so building 'MACS3.Signal.PeakVariants' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/Signal/PeakVariants.c -o build/temp.linux-armv7l-cpython-314/MACS3/Signal/PeakVariants.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/Signal/PeakVariants.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/Signal/PeakVariants.cpython-314-arm-linux-gnueabihf.so building 'MACS3.IO.Parser' extension creating build/temp.linux-armv7l-cpython-314/MACS3/IO arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/IO/Parser.c -o build/temp.linux-armv7l-cpython-314/MACS3/IO/Parser.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/IO/Parser.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-314/MACS3/IO/Parser.cpython-314-arm-linux-gnueabihf.so building 'MACS3.IO.PeakIO' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.14 -c MACS3/IO/PeakIO.c -o build/temp.linux-armv7l-cpython-314/MACS3/IO/PeakIO.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/IO/PeakIO.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-314/MACS3/IO/PeakIO.cpython-314-arm-linux-gnueabihf.so building 'MACS3.IO.BedGraphIO' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.14 -c MACS3/IO/BedGraphIO.c -o build/temp.linux-armv7l-cpython-314/MACS3/IO/BedGraphIO.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/IO/BedGraphIO.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-314/MACS3/IO/BedGraphIO.cpython-314-arm-linux-gnueabihf.so building 'MACS3.IO.BAM' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.14 -c MACS3/IO/BAM.c -o build/temp.linux-armv7l-cpython-314/MACS3/IO/BAM.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-314/MACS3/IO/BAM.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-314/MACS3/IO/BAM.cpython-314-arm-linux-gnueabihf.so running build_scripts creating build/scripts-3.14 copying and adjusting bin/macs3 -> build/scripts-3.14 changing mode of build/scripts-3.14/macs3 from 644 to 755 installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/MACS3 creating build/bdist.linux-armv7l/wheel/MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/SignalProcessing.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/FixWidthTrack.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/HMMR_HMM.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/ScoreTrack.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/BedGraph.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/PeakModel.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/UnitigRACollection.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/Region.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/PairedEndTrack.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/Prob.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/PosReadsInfo.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/RACollection.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/ReadAlignment.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/CallPeakUnit.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/HMMR_Signal_Processing.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/__init__.py -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/PeakDetect.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/PileupV2.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/PeakVariants.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/HMMR_EM.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/VariantStat.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-314/MACS3/Signal/Pileup.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal creating build/bdist.linux-armv7l/wheel/MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/cmbreps_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/predictd_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/bdgdiff_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/refinepeak_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/bdgopt_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/bdgpeakcall_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/callpeak_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/bdgbroadcall_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/hmmratac_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/pileup_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/filterdup_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/diffpeak_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/bdgcmp_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/__init__.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/randsample_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/Commands/callvar_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-314/MACS3/__init__.py -> build/bdist.linux-armv7l/wheel/./MACS3 creating build/bdist.linux-armv7l/wheel/MACS3/IO copying build/lib.linux-armv7l-cpython-314/MACS3/IO/PeakIO.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/IO copying build/lib.linux-armv7l-cpython-314/MACS3/IO/BAM.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/IO copying build/lib.linux-armv7l-cpython-314/MACS3/IO/BedGraphIO.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/IO copying build/lib.linux-armv7l-cpython-314/MACS3/IO/__init__.py -> build/bdist.linux-armv7l/wheel/./MACS3/IO copying build/lib.linux-armv7l-cpython-314/MACS3/IO/OutputWriter.py -> build/bdist.linux-armv7l/wheel/./MACS3/IO copying build/lib.linux-armv7l-cpython-314/MACS3/IO/Parser.cpython-314-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/IO creating build/bdist.linux-armv7l/wheel/MACS3/Utilities copying build/lib.linux-armv7l-cpython-314/MACS3/Utilities/OptValidator.py -> build/bdist.linux-armv7l/wheel/./MACS3/Utilities copying build/lib.linux-armv7l-cpython-314/MACS3/Utilities/__init__.py -> build/bdist.linux-armv7l/wheel/./MACS3/Utilities copying build/lib.linux-armv7l-cpython-314/MACS3/Utilities/Logger.py -> build/bdist.linux-armv7l/wheel/./MACS3/Utilities copying build/lib.linux-armv7l-cpython-314/MACS3/Utilities/Constants.py -> build/bdist.linux-armv7l/wheel/./MACS3/Utilities running install_egg_info running egg_info creating MACS3.egg-info writing MACS3.egg-info/PKG-INFO writing dependency_links to MACS3.egg-info/dependency_links.txt writing requirements to MACS3.egg-info/requires.txt writing top-level names to MACS3.egg-info/top_level.txt writing manifest file 'MACS3.egg-info/SOURCES.txt' dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'MACS3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'make_docker_base.sh' warning: no previously-included files matching '.ipynb_checkpoints/*' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'MACS3.egg-info/SOURCES.txt' Copying MACS3.egg-info to build/bdist.linux-armv7l/wheel/./MACS3-3.0.2.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/macs3-3.0.2.data/scripts copying build/scripts-3.14/macs3 -> build/bdist.linux-armv7l/wheel/macs3-3.0.2.data/scripts changing mode of build/bdist.linux-armv7l/wheel/macs3-3.0.2.data/scripts/macs3 to 755 creating build/bdist.linux-armv7l/wheel/macs3-3.0.2.dist-info/WHEEL creating '/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3/.tmp-sghjnr1k/macs3-3.0.2-cp314-cp314-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'MACS3/__init__.py' adding 'MACS3/Commands/__init__.py' adding 'MACS3/Commands/bdgbroadcall_cmd.py' adding 'MACS3/Commands/bdgcmp_cmd.py' adding 'MACS3/Commands/bdgdiff_cmd.py' adding 'MACS3/Commands/bdgopt_cmd.py' adding 'MACS3/Commands/bdgpeakcall_cmd.py' adding 'MACS3/Commands/callpeak_cmd.py' adding 'MACS3/Commands/callvar_cmd.py' adding 'MACS3/Commands/cmbreps_cmd.py' adding 'MACS3/Commands/diffpeak_cmd.py' adding 'MACS3/Commands/filterdup_cmd.py' adding 'MACS3/Commands/hmmratac_cmd.py' adding 'MACS3/Commands/pileup_cmd.py' adding 'MACS3/Commands/predictd_cmd.py' adding 'MACS3/Commands/randsample_cmd.py' adding 'MACS3/Commands/refinepeak_cmd.py' adding 'MACS3/IO/BAM.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/IO/BedGraphIO.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/IO/OutputWriter.py' adding 'MACS3/IO/Parser.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/IO/PeakIO.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/IO/__init__.py' adding 'MACS3/Signal/BedGraph.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/CallPeakUnit.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/FixWidthTrack.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/HMMR_EM.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/HMMR_HMM.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/HMMR_Signal_Processing.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PairedEndTrack.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PeakDetect.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PeakModel.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PeakVariants.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/Pileup.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PileupV2.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PosReadsInfo.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/Prob.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/RACollection.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/ReadAlignment.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/Region.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/ScoreTrack.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/SignalProcessing.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/UnitigRACollection.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/VariantStat.cpython-314-arm-linux-gnueabihf.so' adding 'MACS3/Signal/__init__.py' adding 'MACS3/Utilities/Constants.py' adding 'MACS3/Utilities/Logger.py' adding 'MACS3/Utilities/OptValidator.py' adding 'MACS3/Utilities/__init__.py' adding 'macs3-3.0.2.data/scripts/macs3' adding 'macs3-3.0.2.dist-info/licenses/LICENSE' adding 'macs3-3.0.2.dist-info/METADATA' adding 'macs3-3.0.2.dist-info/WHEEL' adding 'macs3-3.0.2.dist-info/top_level.txt' adding 'macs3-3.0.2.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Successfully built macs3-3.0.2-cp314-cp314-linux_armv7l.whl I: pybuild plugin_pyproject:155: Unpacking wheel built for python3.14 with "installer" module I: pybuild plugin_pyproject:131: Building wheel for python3.13 with "build" module I: pybuild base:317: python3.13 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3 * Building wheel... /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: BSD License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running bdist_wheel running build running build_py creating build/lib.linux-armv7l-cpython-313/MACS3 copying MACS3/__init__.py -> build/lib.linux-armv7l-cpython-313/MACS3 creating build/lib.linux-armv7l-cpython-313/MACS3/IO copying MACS3/IO/__init__.py -> build/lib.linux-armv7l-cpython-313/MACS3/IO copying MACS3/IO/OutputWriter.py -> build/lib.linux-armv7l-cpython-313/MACS3/IO creating build/lib.linux-armv7l-cpython-313/MACS3/Signal copying MACS3/Signal/__init__.py -> build/lib.linux-armv7l-cpython-313/MACS3/Signal creating build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/cmbreps_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/predictd_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/bdgdiff_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/refinepeak_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/bdgopt_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/bdgpeakcall_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/callpeak_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/bdgbroadcall_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/hmmratac_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/pileup_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/filterdup_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/diffpeak_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/bdgcmp_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/__init__.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/randsample_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands copying MACS3/Commands/callvar_cmd.py -> build/lib.linux-armv7l-cpython-313/MACS3/Commands creating build/lib.linux-armv7l-cpython-313/MACS3/Utilities copying MACS3/Utilities/OptValidator.py -> build/lib.linux-armv7l-cpython-313/MACS3/Utilities copying MACS3/Utilities/__init__.py -> build/lib.linux-armv7l-cpython-313/MACS3/Utilities copying MACS3/Utilities/Logger.py -> build/lib.linux-armv7l-cpython-313/MACS3/Utilities copying MACS3/Utilities/Constants.py -> build/lib.linux-armv7l-cpython-313/MACS3/Utilities running build_ext building 'MACS3.Signal.HMMR_EM' extension creating build/temp.linux-armv7l-cpython-313/MACS3/Signal arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/HMMR_EM.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/HMMR_EM.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/HMMR_EM.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/HMMR_EM.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.HMMR_Signal_Processing' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/HMMR_Signal_Processing.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/HMMR_Signal_Processing.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/HMMR_Signal_Processing.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/HMMR_Signal_Processing.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.HMMR_HMM' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/HMMR_HMM.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/HMMR_HMM.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/HMMR_HMM.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/HMMR_HMM.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.Prob' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/Prob.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/Prob.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/Prob.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/Prob.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.Region' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/Region.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/Region.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/Region.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/Region.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.Pileup' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/Pileup.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/Pileup.o -w -O3 arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/cPosValCalculation.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/cPosValCalculation.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/Pileup.o build/temp.linux-armv7l-cpython-313/MACS3/Signal/cPosValCalculation.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/Pileup.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.PileupV2' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PileupV2.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/PileupV2.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/PileupV2.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/PileupV2.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.PeakModel' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PeakModel.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/PeakModel.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/PeakModel.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/PeakModel.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.PeakDetect' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c MACS3/Signal/PeakDetect.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/PeakDetect.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/PeakDetect.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/PeakDetect.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.SignalProcessing' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/SignalProcessing.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/SignalProcessing.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/SignalProcessing.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/SignalProcessing.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.FixWidthTrack' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/FixWidthTrack.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/FixWidthTrack.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/FixWidthTrack.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/FixWidthTrack.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.PairedEndTrack' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PairedEndTrack.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/PairedEndTrack.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/PairedEndTrack.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/PairedEndTrack.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.BedGraph' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/BedGraph.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/BedGraph.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/BedGraph.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/BedGraph.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.ScoreTrack' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/ScoreTrack.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/ScoreTrack.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/ScoreTrack.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/ScoreTrack.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.CallPeakUnit' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/CallPeakUnit.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/CallPeakUnit.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/CallPeakUnit.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/CallPeakUnit.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.VariantStat' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/VariantStat.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/VariantStat.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/VariantStat.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/VariantStat.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.ReadAlignment' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/ReadAlignment.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/ReadAlignment.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/ReadAlignment.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/ReadAlignment.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.RACollection' extension creating build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/Signal/RACollection.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/RACollection.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/Signal/swalign.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/swalign.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/bfc.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/bfc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/bseq.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/bseq.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/bubble.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/bubble.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/htab.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/htab.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/ksw.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/ksw.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/kthread.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/kthread.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/mag.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/mag.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/misc.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/misc.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/mrope.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/mrope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/rld0.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/rld0.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/rle.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/rle.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/rope.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/rope.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.13 -c MACS3/fermi-lite/unitig.c -o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/unitig.o -w -O3 -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/RACollection.o build/temp.linux-armv7l-cpython-313/MACS3/Signal/swalign.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/bfc.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/bseq.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/bubble.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/htab.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/ksw.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/kthread.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/mag.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/misc.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/mrope.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/rld0.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/rle.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/rope.o build/temp.linux-armv7l-cpython-313/MACS3/fermi-lite/unitig.o -L/usr/lib/arm-linux-gnueabihf -lm -lz -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/RACollection.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.UnitigRACollection' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/UnitigRACollection.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/UnitigRACollection.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/UnitigRACollection.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/UnitigRACollection.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.PosReadsInfo' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PosReadsInfo.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/PosReadsInfo.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/PosReadsInfo.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/PosReadsInfo.cpython-313-arm-linux-gnueabihf.so building 'MACS3.Signal.PeakVariants' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/Signal/PeakVariants.c -o build/temp.linux-armv7l-cpython-313/MACS3/Signal/PeakVariants.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/Signal/PeakVariants.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/Signal/PeakVariants.cpython-313-arm-linux-gnueabihf.so building 'MACS3.IO.Parser' extension creating build/temp.linux-armv7l-cpython-313/MACS3/IO arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/IO/Parser.c -o build/temp.linux-armv7l-cpython-313/MACS3/IO/Parser.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/IO/Parser.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/MACS3/IO/Parser.cpython-313-arm-linux-gnueabihf.so building 'MACS3.IO.PeakIO' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c MACS3/IO/PeakIO.c -o build/temp.linux-armv7l-cpython-313/MACS3/IO/PeakIO.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/IO/PeakIO.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/MACS3/IO/PeakIO.cpython-313-arm-linux-gnueabihf.so building 'MACS3.IO.BedGraphIO' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.13 -c MACS3/IO/BedGraphIO.c -o build/temp.linux-armv7l-cpython-313/MACS3/IO/BedGraphIO.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/IO/BedGraphIO.o -L/usr/lib/arm-linux-gnueabihf -o build/lib.linux-armv7l-cpython-313/MACS3/IO/BedGraphIO.cpython-313-arm-linux-gnueabihf.so building 'MACS3.IO.BAM' extension arm-linux-gnueabihf-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c MACS3/IO/BAM.c -o build/temp.linux-armv7l-cpython-313/MACS3/IO/BAM.o -w -O3 arm-linux-gnueabihf-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-armv7l-cpython-313/MACS3/IO/BAM.o -L/usr/lib/arm-linux-gnueabihf -lm -o build/lib.linux-armv7l-cpython-313/MACS3/IO/BAM.cpython-313-arm-linux-gnueabihf.so running build_scripts creating build/scripts-3.13 copying and adjusting bin/macs3 -> build/scripts-3.13 changing mode of build/scripts-3.13/macs3 from 644 to 755 installing to build/bdist.linux-armv7l/wheel running install running install_lib creating build/bdist.linux-armv7l/wheel creating build/bdist.linux-armv7l/wheel/MACS3 creating build/bdist.linux-armv7l/wheel/MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/PeakModel.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/HMMR_Signal_Processing.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/VariantStat.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/Pileup.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/RACollection.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/HMMR_HMM.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/PeakVariants.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/PosReadsInfo.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/Prob.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/CallPeakUnit.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/__init__.py -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/ReadAlignment.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/PeakDetect.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/PairedEndTrack.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/ScoreTrack.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/Region.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/FixWidthTrack.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/UnitigRACollection.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/BedGraph.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/SignalProcessing.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/HMMR_EM.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal copying build/lib.linux-armv7l-cpython-313/MACS3/Signal/PileupV2.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/Signal creating build/bdist.linux-armv7l/wheel/MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/cmbreps_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/predictd_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/bdgdiff_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/refinepeak_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/bdgopt_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/bdgpeakcall_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/callpeak_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/bdgbroadcall_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/hmmratac_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/pileup_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/filterdup_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/diffpeak_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/bdgcmp_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/__init__.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/randsample_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/Commands/callvar_cmd.py -> build/bdist.linux-armv7l/wheel/./MACS3/Commands copying build/lib.linux-armv7l-cpython-313/MACS3/__init__.py -> build/bdist.linux-armv7l/wheel/./MACS3 creating build/bdist.linux-armv7l/wheel/MACS3/IO copying build/lib.linux-armv7l-cpython-313/MACS3/IO/BedGraphIO.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/IO copying build/lib.linux-armv7l-cpython-313/MACS3/IO/BAM.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/IO copying build/lib.linux-armv7l-cpython-313/MACS3/IO/Parser.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/IO copying build/lib.linux-armv7l-cpython-313/MACS3/IO/PeakIO.cpython-313-arm-linux-gnueabihf.so -> build/bdist.linux-armv7l/wheel/./MACS3/IO copying build/lib.linux-armv7l-cpython-313/MACS3/IO/__init__.py -> build/bdist.linux-armv7l/wheel/./MACS3/IO copying build/lib.linux-armv7l-cpython-313/MACS3/IO/OutputWriter.py -> build/bdist.linux-armv7l/wheel/./MACS3/IO creating build/bdist.linux-armv7l/wheel/MACS3/Utilities copying build/lib.linux-armv7l-cpython-313/MACS3/Utilities/OptValidator.py -> build/bdist.linux-armv7l/wheel/./MACS3/Utilities copying build/lib.linux-armv7l-cpython-313/MACS3/Utilities/__init__.py -> build/bdist.linux-armv7l/wheel/./MACS3/Utilities copying build/lib.linux-armv7l-cpython-313/MACS3/Utilities/Logger.py -> build/bdist.linux-armv7l/wheel/./MACS3/Utilities copying build/lib.linux-armv7l-cpython-313/MACS3/Utilities/Constants.py -> build/bdist.linux-armv7l/wheel/./MACS3/Utilities running install_egg_info running egg_info writing MACS3.egg-info/PKG-INFO writing dependency_links to MACS3.egg-info/dependency_links.txt writing requirements to MACS3.egg-info/requires.txt writing top-level names to MACS3.egg-info/top_level.txt dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/arm-linux-gnueabihf/python3-numpy/numpy/_core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'MACS3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'make_docker_base.sh' warning: no previously-included files matching '.ipynb_checkpoints/*' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'MACS3.egg-info/SOURCES.txt' Copying MACS3.egg-info to build/bdist.linux-armv7l/wheel/./MACS3-3.0.2.egg-info running install_scripts creating build/bdist.linux-armv7l/wheel/macs3-3.0.2.data/scripts copying build/scripts-3.13/macs3 -> build/bdist.linux-armv7l/wheel/macs3-3.0.2.data/scripts changing mode of build/bdist.linux-armv7l/wheel/macs3-3.0.2.data/scripts/macs3 to 755 creating build/bdist.linux-armv7l/wheel/macs3-3.0.2.dist-info/WHEEL creating '/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3/.tmp-y4vd69uc/macs3-3.0.2-cp313-cp313-linux_armv7l.whl' and adding 'build/bdist.linux-armv7l/wheel' to it adding 'MACS3/__init__.py' adding 'MACS3/Commands/__init__.py' adding 'MACS3/Commands/bdgbroadcall_cmd.py' adding 'MACS3/Commands/bdgcmp_cmd.py' adding 'MACS3/Commands/bdgdiff_cmd.py' adding 'MACS3/Commands/bdgopt_cmd.py' adding 'MACS3/Commands/bdgpeakcall_cmd.py' adding 'MACS3/Commands/callpeak_cmd.py' adding 'MACS3/Commands/callvar_cmd.py' adding 'MACS3/Commands/cmbreps_cmd.py' adding 'MACS3/Commands/diffpeak_cmd.py' adding 'MACS3/Commands/filterdup_cmd.py' adding 'MACS3/Commands/hmmratac_cmd.py' adding 'MACS3/Commands/pileup_cmd.py' adding 'MACS3/Commands/predictd_cmd.py' adding 'MACS3/Commands/randsample_cmd.py' adding 'MACS3/Commands/refinepeak_cmd.py' adding 'MACS3/IO/BAM.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/IO/BedGraphIO.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/IO/OutputWriter.py' adding 'MACS3/IO/Parser.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/IO/PeakIO.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/IO/__init__.py' adding 'MACS3/Signal/BedGraph.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/CallPeakUnit.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/FixWidthTrack.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/HMMR_EM.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/HMMR_HMM.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/HMMR_Signal_Processing.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PairedEndTrack.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PeakDetect.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PeakModel.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PeakVariants.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/Pileup.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PileupV2.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/PosReadsInfo.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/Prob.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/RACollection.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/ReadAlignment.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/Region.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/ScoreTrack.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/SignalProcessing.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/UnitigRACollection.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/VariantStat.cpython-313-arm-linux-gnueabihf.so' adding 'MACS3/Signal/__init__.py' adding 'MACS3/Utilities/Constants.py' adding 'MACS3/Utilities/Logger.py' adding 'MACS3/Utilities/OptValidator.py' adding 'MACS3/Utilities/__init__.py' adding 'macs3-3.0.2.data/scripts/macs3' adding 'macs3-3.0.2.dist-info/licenses/LICENSE' adding 'macs3-3.0.2.dist-info/METADATA' adding 'macs3-3.0.2.dist-info/WHEEL' adding 'macs3-3.0.2.dist-info/top_level.txt' adding 'macs3-3.0.2.dist-info/RECORD' removing build/bdist.linux-armv7l/wheel Successfully built macs3-3.0.2-cp313-cp313-linux_armv7l.whl I: pybuild plugin_pyproject:155: Unpacking wheel built for python3.13 with "installer" module PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS3/build/ help2man \ --no-discard-stderr --no-info \ --name "macs3 \- Model\-based Analysis for ChIP\-Sequencing" "python3 bin/macs3" > debian/macs3.1 for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do printf \ "[NAME]\nmac3_${subcommand} \- Model\-based Analysis for ChIP\-Sequencing\n" \ > debian/macs3_${subcommand}-man-include; done for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do \ PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS3/build/ help2man \ --no-discard-stderr --no-info --version-string="3.0.2" \ --include debian/macs3_${subcommand}-man-include \ "python3 bin/macs3 ${subcommand}" > \ debian/macs3_${subcommand}.1; done make[1]: Leaving directory '/build/reproducible-path/macs-3.0.2' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/macs-3.0.2' dh_auto_test I: pybuild base:317: cd /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3/build; python3.14 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.14.0, pytest-8.4.2, pluggy-1.6.0 rootdir: /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.14_MACS3/build configfile: pyproject.toml plugins: typeguard-4.4.4 collected 68 items test/test_BAMBAI.py ........... [ 16%] test/test_BedGraph.py ... [ 20%] test/test_FixWidthTrack.py .... [ 26%] test/test_HMMR_HMM.py ss [ 29%] test/test_HMMR_poisson.py .. [ 32%] test/test_PairedEndTrack.py .... [ 38%] test/test_Parser.py ... [ 42%] test/test_PeakIO.py . [ 44%] test/test_Pileup.py .......... [ 58%] test/test_Prob.py ................ [ 82%] test/test_Region.py ..... [ 89%] test/test_ScoreTrack.py .... [ 95%] test/test_SignalProcessing.py s. [ 98%] test/test_online.py . [100%] ======================== 65 passed, 3 skipped in 10.37s ======================== I: pybuild base:317: cd /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3/build; python3.13 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.13.9, pytest-8.4.2, pluggy-1.6.0 rootdir: /build/reproducible-path/macs-3.0.2/.pybuild/cpython3_3.13_MACS3/build configfile: pyproject.toml plugins: typeguard-4.4.4 collected 68 items test/test_BAMBAI.py ........... [ 16%] test/test_BedGraph.py ... [ 20%] test/test_FixWidthTrack.py .... [ 26%] test/test_HMMR_HMM.py ss [ 29%] test/test_HMMR_poisson.py .. [ 32%] test/test_PairedEndTrack.py .... [ 38%] test/test_Parser.py ... [ 42%] test/test_PeakIO.py . [ 44%] test/test_Pileup.py .......... [ 58%] test/test_Prob.py ................ [ 82%] test/test_Region.py ..... [ 89%] test/test_ScoreTrack.py .... [ 95%] test/test_SignalProcessing.py s. [ 98%] test/test_online.py . [100%] ======================== 65 passed, 3 skipped in 9.56s ========================= cd test && for PY3VER in 3.14 3.13; do \ export PATH=/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_${PY3VER}_MACS3/scripts:$PATH \ && export PYTHONPATH=/build/reproducible-path/macs-3.0.2/.pybuild/cpython3_${PY3VER}_MACS3/build \ && ./cmdlinetest macs3.0.2-2+b1-${PY3VER} ; done 1. callpeak 1.1 callpeak narrow 1.2 callpeak broad 1.3 callpeak on PE narrow/broad 2. pileup 3. filterdup 4. predictd 5. randsample 6. refinepeak 7. bdgcmp 8. bdgpeakcall 9. bdgbroadcall 10. bdgdiff 11. cmbreps 12. bdgopt 13. callvar 14. 50k contigs with buffersize 14.1 callpeak 14.2 filterdup 14.3 pileup 14.4 randsample 15. hmmratac 15.1 hmmratac load training regions from bedfile 16. search for errors or warnings in log files checking ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_callpeak_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_filterdup_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_randsample.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgbroadcall/run_bdgbroadcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgcmp/run_bdgcmp.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/run_bdgdiff_w_o_file.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/run_bdgdiff_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgopt/run_bdgopt_max.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgopt/run_bdgopt_min.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgpeakcall/run_bdgpeakcall_cutoff.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_bdgpeakcall/run_bdgpeakcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_broad/run_callpeak_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow0.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow1.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow2.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow3.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow4.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow5.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_callvar/run_callvar_PE.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_fisher.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_max.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_mean.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup_d.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup_pe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup_pe_d.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_bedpe_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_load_hmm_model.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_load_hmm_model_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_load_training_regions.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_load_training_regions_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/run_hmmratac_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRL.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRLPE.bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRLPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIPPE.bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIPPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd_bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_randsample/run_randsample.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_randsample/run_randsample_bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_randsample/run_randsample_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_refinepeak/run_refinepeak_w_ofile.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.14_run_refinepeak/run_refinepeak_w_prefix.log... ... clear! 17. compare with standard outputs 16.1.1 checking 50kcontigs run_callpeak_50kcontigs_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak vs standard_results_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak ... success! Results are the same! 16.1.2 checking 50kcontigs run_callpeak_50kcontigs_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_callpeak_50kcontigs_summits.bed vs standard_results_50kcontigs/run_callpeak_50kcontigs_summits.bed ... success! Results are the same! 16.1.3 checking 50kcontigs run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_filterdup_result.bed vs standard_results_50kcontigs/run_filterdup_result.bed ... success! Results are the same! 16.1.4 checking 50kcontigs run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_50kcontigs/run_pileup_ChIP.bed.bdg vs standard_results_50kcontigs/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.2.1 checking bdgbroadcall run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 vs standard_results_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... success! Results are the same! 16.3.1 checking bdgcmp run_bdgcmp_FE.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgcmp/run_bdgcmp_FE.bdg vs standard_results_bdgcmp/run_bdgcmp_FE.bdg ... success! Results are the same! 16.3.2 checking bdgcmp run_bdgcmp_ppois.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgcmp/run_bdgcmp_ppois.bdg vs standard_results_bdgcmp/run_bdgcmp_ppois.bdg ... success! Results are the same! 16.4.1 checking bdgdiff common.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/common.bed vs standard_results_bdgdiff/common.bed ... success! Results are the same! 16.4.2 checking bdgdiff cond1.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/cond1.bed vs standard_results_bdgdiff/cond1.bed ... success! Results are the same! 16.4.3 checking bdgdiff cond2.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/cond2.bed vs standard_results_bdgdiff/cond2.bed ... success! Results are the same! 16.4.4 checking bdgdiff run_bdgdiff_prefix_c3.0_common.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed ... success! Results are the same! 16.4.5 checking bdgdiff run_bdgdiff_prefix_c3.0_cond1.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed ... success! Results are the same! 16.4.6 checking bdgdiff run_bdgdiff_prefix_c3.0_cond2.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed ... success! Results are the same! 16.5.1 checking bdgpeakcall run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak vs standard_results_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... success! Results are the same! 16.6.1 checking callpeak_broad run_callpeak_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_broad/run_callpeak_broad_control_lambda.bdg vs standard_results_callpeak_broad/run_callpeak_broad_control_lambda.bdg ... success! Results are the same! 16.6.2 checking callpeak_broad run_callpeak_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_broad/run_callpeak_broad_peaks.broadPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.broadPeak ... success! Results are the same! 16.6.3 checking callpeak_broad run_callpeak_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_broad/run_callpeak_broad_peaks.gappedPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.gappedPeak ... success! Results are the same! 16.6.4 checking callpeak_broad run_callpeak_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_broad/run_callpeak_broad_treat_pileup.bdg vs standard_results_callpeak_broad/run_callpeak_broad_treat_pileup.bdg ... success! Results are the same! 16.7.1 checking callpeak_narrow run_callpeak_narrow0_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg ... success! Results are the same! 16.7.2 checking callpeak_narrow run_callpeak_narrow0_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak ... success! Results are the same! 16.7.3 checking callpeak_narrow run_callpeak_narrow0_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow0_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow0_summits.bed ... success! Results are the same! 16.7.4 checking callpeak_narrow run_callpeak_narrow0_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg ... success! Results are the same! 16.7.5 checking callpeak_narrow run_callpeak_narrow1_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg ... success! Results are the same! 16.7.6 checking callpeak_narrow run_callpeak_narrow1_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak ... success! Results are the same! 16.7.7 checking callpeak_narrow run_callpeak_narrow1_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow1_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow1_summits.bed ... success! Results are the same! 16.7.8 checking callpeak_narrow run_callpeak_narrow1_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg ... success! Results are the same! 16.7.9 checking callpeak_narrow run_callpeak_narrow2_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg ... success! Results are the same! 16.7.10 checking callpeak_narrow run_callpeak_narrow2_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak ... success! Results are the same! 16.7.11 checking callpeak_narrow run_callpeak_narrow2_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow2_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow2_summits.bed ... success! Results are the same! 16.7.12 checking callpeak_narrow run_callpeak_narrow2_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg ... success! Results are the same! 16.7.13 checking callpeak_narrow run_callpeak_narrow3_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg ... success! Results are the same! 16.7.14 checking callpeak_narrow run_callpeak_narrow3_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak ... success! Results are the same! 16.7.15 checking callpeak_narrow run_callpeak_narrow3_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow3_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow3_summits.bed ... success! Results are the same! 16.7.16 checking callpeak_narrow run_callpeak_narrow3_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg ... success! Results are the same! 16.7.17 checking callpeak_narrow run_callpeak_narrow4_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg ... success! Results are the same! 16.7.18 checking callpeak_narrow run_callpeak_narrow4_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak ... success! Results are the same! 16.7.19 checking callpeak_narrow run_callpeak_narrow4_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow4_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow4_summits.bed ... success! Results are the same! 16.7.20 checking callpeak_narrow run_callpeak_narrow4_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg ... success! Results are the same! 16.7.21 checking callpeak_narrow run_callpeak_narrow5_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg ... success! Results are the same! 16.7.22 checking callpeak_narrow run_callpeak_narrow5_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak ... success! Results are the same! 16.7.23 checking callpeak_narrow run_callpeak_narrow5_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow5_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow5_summits.bed ... success! Results are the same! 16.7.24 checking callpeak_narrow run_callpeak_narrow5_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg ... success! Results are the same! 16.8.1 checking callpeak_narrow_revert run_callpeak_narrow_revert_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg ... success! Results are the same! 16.8.2 checking callpeak_narrow_revert run_callpeak_narrow_revert_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak ... success! Results are the same! 16.8.3 checking callpeak_narrow_revert run_callpeak_narrow_revert_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed ... success! Results are the same! 16.8.4 checking callpeak_narrow_revert run_callpeak_narrow_revert_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg ... success! Results are the same! 16.9.1 checking callpeak_pe_broad run_callpeak_bampe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg ... success! Results are the same! 16.9.2 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak ... success! Results are the same! 16.9.3 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.4 checking callpeak_pe_broad run_callpeak_bampe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg ... success! Results are the same! 16.9.5 checking callpeak_pe_broad run_callpeak_bedpe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg ... success! Results are the same! 16.9.6 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak ... success! Results are the same! 16.9.7 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.8 checking callpeak_pe_broad run_callpeak_bedpe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg ... success! Results are the same! 16.10.1 checking callpeak_pe_narrow run_callpeak_bampe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.2 checking callpeak_pe_narrow run_callpeak_bampe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.3 checking callpeak_pe_narrow run_callpeak_bampe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed ... success! Results are the same! 16.10.4 checking callpeak_pe_narrow run_callpeak_bampe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.5 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.6 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.7 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed ... success! Results are the same! 16.10.8 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.9 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... success! Results are the same! 16.10.10 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... success! Results are the same! 16.10.11 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed ... success! Results are the same! 16.10.12 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... success! Results are the same! 16.11.1 checking cmbreps run_cmbreps_fisher.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_fisher.bdg vs standard_results_cmbreps/run_cmbreps_fisher.bdg ... success! Results are the same! 16.11.2 checking cmbreps run_cmbreps_max.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_max.bdg vs standard_results_cmbreps/run_cmbreps_max.bdg ... success! Results are the same! 16.11.3 checking cmbreps run_cmbreps_mean.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_cmbreps/run_cmbreps_mean.bdg vs standard_results_cmbreps/run_cmbreps_mean.bdg ... success! Results are the same! 16.12.1 checking filterdup run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup_result.bed vs standard_results_filterdup/run_filterdup_result.bed ... success! Results are the same! 16.12.2 checking filterdup run_filterdup_result_pe.bedpe ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_filterdup/run_filterdup_result_pe.bedpe vs standard_results_filterdup/run_filterdup_result_pe.bedpe ... success! Results are the same! 16.13.1 checking pileup run_pileup_CTRL.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRL.bed.bdg vs standard_results_pileup/run_pileup_CTRL.bed.bdg ... success! Results are the same! 16.13.2 checking pileup run_pileup_CTRLPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRLPE.bampe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bampe.bdg ... success! Results are the same! 16.13.3 checking pileup run_pileup_CTRLPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_CTRLPE.bedpe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bedpe.bdg ... success! Results are the same! 16.13.4 checking pileup run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIP.bed.bdg vs standard_results_pileup/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.13.5 checking pileup run_pileup_ChIPPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIPPE.bampe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bampe.bdg ... success! Results are the same! 16.13.6 checking pileup run_pileup_ChIPPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_pileup/run_pileup_ChIPPE.bedpe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bedpe.bdg ... success! Results are the same! 16.14.1 checking refinepeak run_refinepeak_w_ofile.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_refinepeak/run_refinepeak_w_ofile.bed vs standard_results_refinepeak/run_refinepeak_w_ofile.bed ... success! Results are the same! 16.14.2 checking refinepeak run_refinepeak_w_prefix_refinepeak.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_refinepeak/run_refinepeak_w_prefix_refinepeak.bed vs standard_results_refinepeak/run_refinepeak_w_prefix_refinepeak.bed ... success! Results are the same! 16.15.1 checking bdgopt run_bdgopt_max.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgopt/run_bdgopt_max.bdg vs standard_results_bdgopt/run_bdgopt_max.bdg ... success! Results are the same! 16.15.2 checking bdgopt run_bdgopt_min.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_bdgopt/run_bdgopt_min.bdg vs standard_results_bdgopt/run_bdgopt_min.bdg ... success! Results are the same! 16.16.1 checking predictd run_predictd.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd.txt vs standard_results_predictd/run_predictd.txt ... success! Results are the same! 16.16.2 checking predictd run_predictd_bampe.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd_bampe.txt vs standard_results_predictd/run_predictd_bampe.txt ... success! Results are the same! 16.16.3 checking predictd run_predictd_bedpe.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_predictd/run_predictd_bedpe.txt vs standard_results_predictd/run_predictd_bedpe.txt ... success! Results are the same! 16.17.1 checking callvar PEsample.vcf ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_callvar/PEsample.vcf vs standard_results_callvar/PEsample.vcf ... success! Results are the same! 16.18.1 checking hmmratac hmmratac_yeast500k_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak ... success! Results are the same! 16.18.2 checking hmmratac hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... success! Results are the same! 16.18.3 checking hmmratac hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.4 checking hmmratac hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.5 checking hmmratac hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 16.18.6 checking hmmratac hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.7 checking hmmratac hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.8 checking hmmratac hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.14_run_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 18. brief speed test CPU time (mm:ss): 00:01:09 Max mem (KB): 169884 1. callpeak 1.1 callpeak narrow 1.2 callpeak broad 1.3 callpeak on PE narrow/broad 2. pileup 3. filterdup 4. predictd 5. randsample 6. refinepeak 7. bdgcmp 8. bdgpeakcall 9. bdgbroadcall 10. bdgdiff 11. cmbreps 12. bdgopt 13. callvar 14. 50k contigs with buffersize 14.1 callpeak 14.2 filterdup 14.3 pileup 14.4 randsample 15. hmmratac 15.1 hmmratac load training regions from bedfile 16. search for errors or warnings in log files checking ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_callpeak_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_filterdup_50kcontigs.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_randsample.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgbroadcall/run_bdgbroadcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgcmp/run_bdgcmp.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/run_bdgdiff_w_o_file.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/run_bdgdiff_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgopt/run_bdgopt_max.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgopt/run_bdgopt_min.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgpeakcall/run_bdgpeakcall_cutoff.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_bdgpeakcall/run_bdgpeakcall_w_prefix.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_broad/run_callpeak_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow0.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow1.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow2.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow3.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow4.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow5.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_callvar/run_callvar_PE.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_fisher.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_max.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_mean.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup_d.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup_pe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup_pe_d.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_bedpe_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_load_hmm_model.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_load_hmm_model_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_load_training_regions.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_load_training_regions_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/run_hmmratac_poisson.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRL.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRLPE.bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRLPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIP.bed.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIPPE.bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIPPE.bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd_bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_randsample/run_randsample.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_randsample/run_randsample_bampe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_randsample/run_randsample_bedpe.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_refinepeak/run_refinepeak_w_ofile.log... ... clear! checking ../temp/macs3.0.2-2+b1-3.13_run_refinepeak/run_refinepeak_w_prefix.log... ... clear! 17. compare with standard outputs 16.1.1 checking 50kcontigs run_callpeak_50kcontigs_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak vs standard_results_50kcontigs/run_callpeak_50kcontigs_peaks.narrowPeak ... success! Results are the same! 16.1.2 checking 50kcontigs run_callpeak_50kcontigs_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_callpeak_50kcontigs_summits.bed vs standard_results_50kcontigs/run_callpeak_50kcontigs_summits.bed ... success! Results are the same! 16.1.3 checking 50kcontigs run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_filterdup_result.bed vs standard_results_50kcontigs/run_filterdup_result.bed ... success! Results are the same! 16.1.4 checking 50kcontigs run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_50kcontigs/run_pileup_ChIP.bed.bdg vs standard_results_50kcontigs/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.2.1 checking bdgbroadcall run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 vs standard_results_bdgbroadcall/run_bdgbroadcall_w_prefix_c2.0_C1.50_l200_g30_G800_broad.bed12 ... success! Results are the same! 16.3.1 checking bdgcmp run_bdgcmp_FE.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgcmp/run_bdgcmp_FE.bdg vs standard_results_bdgcmp/run_bdgcmp_FE.bdg ... success! Results are the same! 16.3.2 checking bdgcmp run_bdgcmp_ppois.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgcmp/run_bdgcmp_ppois.bdg vs standard_results_bdgcmp/run_bdgcmp_ppois.bdg ... success! Results are the same! 16.4.1 checking bdgdiff common.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/common.bed vs standard_results_bdgdiff/common.bed ... success! Results are the same! 16.4.2 checking bdgdiff cond1.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/cond1.bed vs standard_results_bdgdiff/cond1.bed ... success! Results are the same! 16.4.3 checking bdgdiff cond2.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/cond2.bed vs standard_results_bdgdiff/cond2.bed ... success! Results are the same! 16.4.4 checking bdgdiff run_bdgdiff_prefix_c3.0_common.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_common.bed ... success! Results are the same! 16.4.5 checking bdgdiff run_bdgdiff_prefix_c3.0_cond1.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond1.bed ... success! Results are the same! 16.4.6 checking bdgdiff run_bdgdiff_prefix_c3.0_cond2.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed vs standard_results_bdgdiff/run_bdgdiff_prefix_c3.0_cond2.bed ... success! Results are the same! 16.5.1 checking bdgpeakcall run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak vs standard_results_bdgpeakcall/run_bdgpeakcall_w_prefix_c2.0_l200_g30_peaks.narrowPeak ... success! Results are the same! 16.6.1 checking callpeak_broad run_callpeak_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_broad/run_callpeak_broad_control_lambda.bdg vs standard_results_callpeak_broad/run_callpeak_broad_control_lambda.bdg ... success! Results are the same! 16.6.2 checking callpeak_broad run_callpeak_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_broad/run_callpeak_broad_peaks.broadPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.broadPeak ... success! Results are the same! 16.6.3 checking callpeak_broad run_callpeak_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_broad/run_callpeak_broad_peaks.gappedPeak vs standard_results_callpeak_broad/run_callpeak_broad_peaks.gappedPeak ... success! Results are the same! 16.6.4 checking callpeak_broad run_callpeak_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_broad/run_callpeak_broad_treat_pileup.bdg vs standard_results_callpeak_broad/run_callpeak_broad_treat_pileup.bdg ... success! Results are the same! 16.7.1 checking callpeak_narrow run_callpeak_narrow0_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_control_lambda.bdg ... success! Results are the same! 16.7.2 checking callpeak_narrow run_callpeak_narrow0_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow0_peaks.narrowPeak ... success! Results are the same! 16.7.3 checking callpeak_narrow run_callpeak_narrow0_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow0_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow0_summits.bed ... success! Results are the same! 16.7.4 checking callpeak_narrow run_callpeak_narrow0_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow0_treat_pileup.bdg ... success! Results are the same! 16.7.5 checking callpeak_narrow run_callpeak_narrow1_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_control_lambda.bdg ... success! Results are the same! 16.7.6 checking callpeak_narrow run_callpeak_narrow1_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow1_peaks.narrowPeak ... success! Results are the same! 16.7.7 checking callpeak_narrow run_callpeak_narrow1_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow1_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow1_summits.bed ... success! Results are the same! 16.7.8 checking callpeak_narrow run_callpeak_narrow1_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow1_treat_pileup.bdg ... success! Results are the same! 16.7.9 checking callpeak_narrow run_callpeak_narrow2_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_control_lambda.bdg ... success! Results are the same! 16.7.10 checking callpeak_narrow run_callpeak_narrow2_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow2_peaks.narrowPeak ... success! Results are the same! 16.7.11 checking callpeak_narrow run_callpeak_narrow2_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow2_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow2_summits.bed ... success! Results are the same! 16.7.12 checking callpeak_narrow run_callpeak_narrow2_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow2_treat_pileup.bdg ... success! Results are the same! 16.7.13 checking callpeak_narrow run_callpeak_narrow3_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_control_lambda.bdg ... success! Results are the same! 16.7.14 checking callpeak_narrow run_callpeak_narrow3_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow3_peaks.narrowPeak ... success! Results are the same! 16.7.15 checking callpeak_narrow run_callpeak_narrow3_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow3_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow3_summits.bed ... success! Results are the same! 16.7.16 checking callpeak_narrow run_callpeak_narrow3_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow3_treat_pileup.bdg ... success! Results are the same! 16.7.17 checking callpeak_narrow run_callpeak_narrow4_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_control_lambda.bdg ... success! Results are the same! 16.7.18 checking callpeak_narrow run_callpeak_narrow4_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow4_peaks.narrowPeak ... success! Results are the same! 16.7.19 checking callpeak_narrow run_callpeak_narrow4_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow4_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow4_summits.bed ... success! Results are the same! 16.7.20 checking callpeak_narrow run_callpeak_narrow4_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow4_treat_pileup.bdg ... success! Results are the same! 16.7.21 checking callpeak_narrow run_callpeak_narrow5_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_control_lambda.bdg ... success! Results are the same! 16.7.22 checking callpeak_narrow run_callpeak_narrow5_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak vs standard_results_callpeak_narrow/run_callpeak_narrow5_peaks.narrowPeak ... success! Results are the same! 16.7.23 checking callpeak_narrow run_callpeak_narrow5_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow5_summits.bed vs standard_results_callpeak_narrow/run_callpeak_narrow5_summits.bed ... success! Results are the same! 16.7.24 checking callpeak_narrow run_callpeak_narrow5_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg vs standard_results_callpeak_narrow/run_callpeak_narrow5_treat_pileup.bdg ... success! Results are the same! 16.8.1 checking callpeak_narrow_revert run_callpeak_narrow_revert_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_control_lambda.bdg ... success! Results are the same! 16.8.2 checking callpeak_narrow_revert run_callpeak_narrow_revert_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_peaks.narrowPeak ... success! Results are the same! 16.8.3 checking callpeak_narrow_revert run_callpeak_narrow_revert_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_summits.bed ... success! Results are the same! 16.8.4 checking callpeak_narrow_revert run_callpeak_narrow_revert_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg vs standard_results_callpeak_narrow_revert/run_callpeak_narrow_revert_treat_pileup.bdg ... success! Results are the same! 16.9.1 checking callpeak_pe_broad run_callpeak_bampe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_control_lambda.bdg ... success! Results are the same! 16.9.2 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.broadPeak ... success! Results are the same! 16.9.3 checking callpeak_pe_broad run_callpeak_bampe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.4 checking callpeak_pe_broad run_callpeak_bampe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bampe_broad_treat_pileup.bdg ... success! Results are the same! 16.9.5 checking callpeak_pe_broad run_callpeak_bedpe_broad_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_control_lambda.bdg ... success! Results are the same! 16.9.6 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.broadPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.broadPeak ... success! Results are the same! 16.9.7 checking callpeak_pe_broad run_callpeak_bedpe_broad_peaks.gappedPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_peaks.gappedPeak ... success! Results are the same! 16.9.8 checking callpeak_pe_broad run_callpeak_bedpe_broad_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg vs standard_results_callpeak_pe_broad/run_callpeak_bedpe_broad_treat_pileup.bdg ... success! Results are the same! 16.10.1 checking callpeak_pe_narrow run_callpeak_bampe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.2 checking callpeak_pe_narrow run_callpeak_bampe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.3 checking callpeak_pe_narrow run_callpeak_bampe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_summits.bed ... success! Results are the same! 16.10.4 checking callpeak_pe_narrow run_callpeak_bampe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bampe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.5 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_control_lambda.bdg ... success! Results are the same! 16.10.6 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_peaks.narrowPeak ... success! Results are the same! 16.10.7 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_summits.bed ... success! Results are the same! 16.10.8 checking callpeak_pe_narrow run_callpeak_bedpe_narrow_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_bedpe_narrow_treat_pileup.bdg ... success! Results are the same! 16.10.9 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_control_lambda.bdg ... success! Results are the same! 16.10.10 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak ... success! Results are the same! 16.10.11 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_summits.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_summits.bed ... success! Results are the same! 16.10.12 checking callpeak_pe_narrow run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg vs standard_results_callpeak_pe_narrow/run_callpeak_pe_narrow_onlychip_treat_pileup.bdg ... success! Results are the same! 16.11.1 checking cmbreps run_cmbreps_fisher.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_fisher.bdg vs standard_results_cmbreps/run_cmbreps_fisher.bdg ... success! Results are the same! 16.11.2 checking cmbreps run_cmbreps_max.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_max.bdg vs standard_results_cmbreps/run_cmbreps_max.bdg ... success! Results are the same! 16.11.3 checking cmbreps run_cmbreps_mean.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_cmbreps/run_cmbreps_mean.bdg vs standard_results_cmbreps/run_cmbreps_mean.bdg ... success! Results are the same! 16.12.1 checking filterdup run_filterdup_result.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup_result.bed vs standard_results_filterdup/run_filterdup_result.bed ... success! Results are the same! 16.12.2 checking filterdup run_filterdup_result_pe.bedpe ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_filterdup/run_filterdup_result_pe.bedpe vs standard_results_filterdup/run_filterdup_result_pe.bedpe ... success! Results are the same! 16.13.1 checking pileup run_pileup_CTRL.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRL.bed.bdg vs standard_results_pileup/run_pileup_CTRL.bed.bdg ... success! Results are the same! 16.13.2 checking pileup run_pileup_CTRLPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRLPE.bampe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bampe.bdg ... success! Results are the same! 16.13.3 checking pileup run_pileup_CTRLPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_CTRLPE.bedpe.bdg vs standard_results_pileup/run_pileup_CTRLPE.bedpe.bdg ... success! Results are the same! 16.13.4 checking pileup run_pileup_ChIP.bed.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIP.bed.bdg vs standard_results_pileup/run_pileup_ChIP.bed.bdg ... success! Results are the same! 16.13.5 checking pileup run_pileup_ChIPPE.bampe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIPPE.bampe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bampe.bdg ... success! Results are the same! 16.13.6 checking pileup run_pileup_ChIPPE.bedpe.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_pileup/run_pileup_ChIPPE.bedpe.bdg vs standard_results_pileup/run_pileup_ChIPPE.bedpe.bdg ... success! Results are the same! 16.14.1 checking refinepeak run_refinepeak_w_ofile.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_refinepeak/run_refinepeak_w_ofile.bed vs standard_results_refinepeak/run_refinepeak_w_ofile.bed ... success! Results are the same! 16.14.2 checking refinepeak run_refinepeak_w_prefix_refinepeak.bed ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_refinepeak/run_refinepeak_w_prefix_refinepeak.bed vs standard_results_refinepeak/run_refinepeak_w_prefix_refinepeak.bed ... success! Results are the same! 16.15.1 checking bdgopt run_bdgopt_max.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgopt/run_bdgopt_max.bdg vs standard_results_bdgopt/run_bdgopt_max.bdg ... success! Results are the same! 16.15.2 checking bdgopt run_bdgopt_min.bdg ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_bdgopt/run_bdgopt_min.bdg vs standard_results_bdgopt/run_bdgopt_min.bdg ... success! Results are the same! 16.16.1 checking predictd run_predictd.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd.txt vs standard_results_predictd/run_predictd.txt ... success! Results are the same! 16.16.2 checking predictd run_predictd_bampe.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd_bampe.txt vs standard_results_predictd/run_predictd_bampe.txt ... success! Results are the same! 16.16.3 checking predictd run_predictd_bedpe.txt ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_predictd/run_predictd_bedpe.txt vs standard_results_predictd/run_predictd_bedpe.txt ... success! Results are the same! 16.17.1 checking callvar PEsample.vcf ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_callvar/PEsample.vcf vs standard_results_callvar/PEsample.vcf ... success! Results are the same! 16.18.1 checking hmmratac hmmratac_yeast500k_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_accessible_regions.narrowPeak ... success! Results are the same! 16.18.2 checking hmmratac hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_accessible_regions.narrowPeak ... success! Results are the same! 16.18.3 checking hmmratac hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_bedpe_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.4 checking hmmratac hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.5 checking hmmratac hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 16.18.6 checking hmmratac hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_accessible_regions.narrowPeak ... success! Results are the same! 16.18.7 checking hmmratac hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_hmm_model_accessible_regions.narrowPeak ... success! Results are the same! 16.18.8 checking hmmratac hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... checking the files: ../temp/macs3.0.2-2+b1-3.13_run_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak vs standard_results_hmmratac/hmmratac_yeast500k_poisson_load_training_regions_accessible_regions.narrowPeak ... success! Results are the same! 18. brief speed test CPU time (mm:ss): 00:01:13 Max mem (KB): 150112 make[1]: Leaving directory '/build/reproducible-path/macs-3.0.2' create-stamp debian/debhelper-build-stamp dh_testroot -a -O--buildsystem=pybuild dh_prep -a -O--buildsystem=pybuild dh_auto_install --destdir=debian/macs/ -a -O--buildsystem=pybuild I: pybuild plugin_pyproject:186: Copying package built for python3.14 to destdir I: pybuild plugin_pyproject:186: Copying package built for python3.13 to destdir dh_installdocs -a -O--buildsystem=pybuild dh_installchangelogs -a -O--buildsystem=pybuild dh_installexamples -a -O--buildsystem=pybuild dh_installman -a -O--buildsystem=pybuild debian/rules execute_before_dh_python3 make[1]: Entering directory '/build/reproducible-path/macs-3.0.2' dh_numpy3 make[1]: Leaving directory '/build/reproducible-path/macs-3.0.2' dh_python3 -a -O--buildsystem=pybuild I: dh_python3 tools:114: replacing shebang in debian/macs/usr/bin/macs3 dh_installsystemduser -a -O--buildsystem=pybuild dh_lintian -a -O--buildsystem=pybuild dh_perl -a -O--buildsystem=pybuild dh_link -a -O--buildsystem=pybuild dh_strip_nondeterminism -a -O--buildsystem=pybuild dh_compress -a -O--buildsystem=pybuild dh_fixperms -a -O--buildsystem=pybuild dh_missing -a -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dh_installdeb -a -O--buildsystem=pybuild dh_gencontrol -a -O--buildsystem=pybuild dh_md5sums -a -O--buildsystem=pybuild dh_builddeb -a -O--buildsystem=pybuild dpkg-deb: building package 'macs-dbgsym' in '../macs-dbgsym_3.0.2-2+b1_armhf.deb'. dpkg-deb: building package 'macs' in '../macs_3.0.2-2+b1_armhf.deb'. dpkg-genbuildinfo --build=any -O../macs_3.0.2-2+b1_armhf.buildinfo dpkg-genchanges --build=any -O../macs_3.0.2-2+b1_armhf.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-source: info: using options from macs-3.0.2/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2026-01-08T07:05:41Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes Thu, 08 Jan 2026 07:05:41 +0000 | +------------------------------------------------------------------------------+ macs_3.0.2-2+b1_armhf.changes: ------------------------------ Format: 1.8 Date: Fri, 05 Dec 2025 22:27:31 +0000 Source: macs (3.0.2-2) Binary: macs macs-dbgsym Binary-Only: yes Architecture: armhf Version: 3.0.2-2+b1 Distribution: unstable Urgency: low Maintainer: Debian Med Packaging Team Changed-By: arm Build Daemon (arm-ubc-05) Description: macs - Model-based Analysis of ChIP-Seq on short reads sequencers Changes: macs (3.0.2-2+b1) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for armhf; no source changes. * Rebuild with Python 3.14 as supported Checksums-Sha1: 4ad22d2778d8c970bfed3ab4fc4cc611148d48c5 24239684 macs-dbgsym_3.0.2-2+b1_armhf.deb 51f3ff479c415e6d6a7b97d42f8cfce76ffbf549 7450 macs_3.0.2-2+b1_armhf.buildinfo e16aaf95da869777312f2645395e84ad761b5511 3937524 macs_3.0.2-2+b1_armhf.deb Checksums-Sha256: 4f6aa8e8766fb0670f0f2ad5c86b6d15c296eca2fc7884758e6221eba89539fd 24239684 macs-dbgsym_3.0.2-2+b1_armhf.deb 3bda8eaf9e4875e3b87dd6fa8b511108fd539eca129706ede7bc34f63784fc44 7450 macs_3.0.2-2+b1_armhf.buildinfo 615e9917ec07108b373bf899eede5b78424d4a5aed4da4931a88efd06d3838ba 3937524 macs_3.0.2-2+b1_armhf.deb Files: ace14a5dc58eb73fb0b8936645c2203d 24239684 debug optional macs-dbgsym_3.0.2-2+b1_armhf.deb 9cfd356dcd47dc48a81a9de86db31be2 7450 science optional macs_3.0.2-2+b1_armhf.buildinfo a4f89b5e2658edfb0d37c39b1d930bfd 3937524 science optional macs_3.0.2-2+b1_armhf.deb +------------------------------------------------------------------------------+ | Buildinfo Thu, 08 Jan 2026 07:05:42 +0000 | +------------------------------------------------------------------------------+ Format: 1.0 Source: macs (3.0.2-2) Binary: macs macs-dbgsym Architecture: armhf Version: 3.0.2-2+b1 Binary-Only-Changes: macs (3.0.2-2+b1) sid; urgency=low, binary-only=yes . * Binary-only non-maintainer upload for armhf; no source changes. * Rebuild with Python 3.14 as supported . -- arm Build Daemon (arm-ubc-05) Fri, 05 Dec 2025 22:27:31 +0000 Checksums-Md5: ace14a5dc58eb73fb0b8936645c2203d 24239684 macs-dbgsym_3.0.2-2+b1_armhf.deb a4f89b5e2658edfb0d37c39b1d930bfd 3937524 macs_3.0.2-2+b1_armhf.deb Checksums-Sha1: 4ad22d2778d8c970bfed3ab4fc4cc611148d48c5 24239684 macs-dbgsym_3.0.2-2+b1_armhf.deb e16aaf95da869777312f2645395e84ad761b5511 3937524 macs_3.0.2-2+b1_armhf.deb Checksums-Sha256: 4f6aa8e8766fb0670f0f2ad5c86b6d15c296eca2fc7884758e6221eba89539fd 24239684 macs-dbgsym_3.0.2-2+b1_armhf.deb 615e9917ec07108b373bf899eede5b78424d4a5aed4da4931a88efd06d3838ba 3937524 macs_3.0.2-2+b1_armhf.deb Build-Origin: Debian Build-Architecture: armhf Build-Date: Thu, 08 Jan 2026 07:05:40 +0000 Build-Path: /build/reproducible-path/macs-3.0.2 Installed-Build-Depends: autoconf (= 2.72-3.1), automake (= 1:1.18.1-3), autopoint (= 0.23.2-1), autotools-dev (= 20240727.1), base-files (= 14), base-passwd (= 3.6.8), bash (= 5.3-1), bc (= 1.07.1-4), binutils (= 2.45.50.20251201-1), binutils-arm-linux-gnueabihf (= 2.45.50.20251201-1), binutils-common (= 2.45.50.20251201-1), bsdextrautils (= 2.41.2-4), build-essential (= 12.12), bzip2 (= 1.0.8-6), ca-certificates (= 20250419), coreutils (= 9.7-3), cpp (= 4:15.2.0-4), cpp-15 (= 15.2.0-10), cpp-15-arm-linux-gnueabihf (= 15.2.0-10), cpp-arm-linux-gnueabihf (= 4:15.2.0-4), cython3 (= 3.1.6+dfsg-2+b1), dash (= 0.5.12-12), debconf (= 1.5.91), debhelper (= 13.28), debianutils (= 5.23.2), dh-autoreconf (= 21), dh-python (= 6.20251204.1), dh-strip-nondeterminism (= 1.15.0-1), diffutils (= 1:3.12-1), dpkg (= 1.22.21), dpkg-dev (= 1.22.21), dwz (= 0.16-2), file (= 1:5.46-5), findutils (= 4.10.0-3), g++ (= 4:15.2.0-4), g++-15 (= 15.2.0-10), g++-15-arm-linux-gnueabihf (= 15.2.0-10), g++-arm-linux-gnueabihf (= 4:15.2.0-4), gcc (= 4:15.2.0-4), gcc-15 (= 15.2.0-10), gcc-15-arm-linux-gnueabihf (= 15.2.0-10), gcc-15-base (= 15.2.0-10), gcc-arm-linux-gnueabihf (= 4:15.2.0-4), gettext (= 0.23.2-1), gettext-base (= 0.23.2-1), grep (= 3.12-1), groff-base (= 1.23.0-10), gzip (= 1.13-1), help2man (= 1.49.3), hostname (= 3.25), init-system-helpers (= 1.69), intltool-debian (= 0.35.0+20060710.6), libacl1 (= 2.3.2-2+b1), libarchive-zip-perl (= 1.68-1), libasan8 (= 15.2.0-10), libatomic1 (= 15.2.0-10), libattr1 (= 1:2.5.2-3), libaudit-common (= 1:4.1.2-1), libaudit1 (= 1:4.1.2-1+b1), libbinutils (= 2.45.50.20251201-1), libblas3 (= 3.12.1-7), libblkid1 (= 2.41.2-4), libbz2-1.0 (= 1.0.8-6), libc-bin (= 2.41-12), libc-dev-bin (= 2.41-12), libc6 (= 2.41-12), libc6-dev (= 2.41-12), libcap-ng0 (= 0.8.5-4+b2), libcap2 (= 1:2.75-10+b2), libcc1-0 (= 15.2.0-10), libcrypt-dev (= 1:4.5.1-1), libcrypt1 (= 1:4.5.1-1), libctf-nobfd0 (= 2.45.50.20251201-1), libctf0 (= 2.45.50.20251201-1), libdb5.3t64 (= 5.3.28+dfsg2-10), libdebconfclient0 (= 0.282), libdebhelper-perl (= 13.28), libdpkg-perl (= 1.22.21), libelf1t64 (= 0.194-1), libexpat1 (= 2.7.3-1), libexpat1-dev (= 2.7.3-1), libffi8 (= 3.5.2-2), libfile-stripnondeterminism-perl (= 1.15.0-1), libgcc-15-dev (= 15.2.0-10), libgcc-s1 (= 15.2.0-10), libgdbm-compat4t64 (= 1.26-1), libgdbm6t64 (= 1.26-1), libgfortran5 (= 15.2.0-10), libgmp10 (= 2:6.3.0+dfsg-5), libgomp1 (= 15.2.0-10), libisl23 (= 0.27-1), libjansson4 (= 2.14-2+b3), libjs-sphinxdoc (= 8.2.3-10), liblapack3 (= 3.12.1-7), liblocale-gettext-perl (= 1.07-7+b1), liblzma5 (= 5.8.1-2), libmagic-mgc (= 1:5.46-5), libmagic1t64 (= 1:5.46-5), libmd0 (= 1.1.0-2+b1), libmount1 (= 2.41.2-4), libmpc3 (= 1.3.1-2), libmpfr6 (= 4.2.2-2), libncursesw6 (= 6.5+20251123-1), libpam-modules (= 1.7.0-5), libpam-modules-bin (= 1.7.0-5), libpam-runtime (= 1.7.0-5), libpam0g (= 1.7.0-5), libpcre2-8-0 (= 10.46-1), libperl5.40 (= 5.40.1-7), libpipeline1 (= 1.5.8-2), libproc2-0 (= 2:4.0.4-9), libpython3-all-dev (= 3.13.9-2), libpython3-dev (= 3.13.9-2), libpython3-stdlib (= 3.13.9-2), libpython3.13 (= 3.13.9-1), libpython3.13-dev (= 3.13.9-1), libpython3.13-minimal (= 3.13.9-1), libpython3.13-stdlib (= 3.13.9-1), libpython3.14 (= 3.14.0-5), libpython3.14-dev (= 3.14.0-5), libpython3.14-minimal (= 3.14.0-5), libpython3.14-stdlib (= 3.14.0-5), libqhull-r8.0 (= 2020.2-7), libreadline8t64 (= 8.3-3), libseccomp2 (= 2.6.0-2+b1), libselinux1 (= 3.9-4+b1), libsframe2 (= 2.45.50.20251201-1), libsimde-dev (= 0.8.2-3), libsmartcols1 (= 2.41.2-4), libsqlite3-0 (= 3.46.1-8), libssl3t64 (= 3.5.4-1), libstdc++-15-dev (= 15.2.0-10), libstdc++6 (= 15.2.0-10), libsystemd0 (= 259~rc2-1), libtinfo6 (= 6.5+20251123-1), libtool (= 2.5.4-7), libubsan1 (= 15.2.0-10), libuchardet0 (= 0.0.8-2), libudev1 (= 259~rc2-1), libunistring5 (= 1.3-2), libuuid1 (= 2.41.2-4), libxml2-16 (= 2.15.1+dfsg-2+b1), libzstd1 (= 1.5.7+dfsg-2), linux-libc-dev (= 6.17.10-1), m4 (= 1.4.20-2), make (= 4.4.1-3), man-db (= 2.13.1-1), mawk (= 1.3.4.20250131-1), media-types (= 14.0.0), ncurses-base (= 6.5+20251123-1), ncurses-bin (= 6.5+20251123-1), netbase (= 6.5), openssl (= 3.5.4-1), openssl-provider-legacy (= 3.5.4-1), patch (= 2.8-2), perl (= 5.40.1-7), perl-base (= 5.40.1-7), perl-modules-5.40 (= 5.40.1-7), po-debconf (= 1.0.21+nmu1), procps (= 2:4.0.4-9), pybuild-plugin-pyproject (= 6.20251204.1), python3 (= 3.13.9-2), python3-all (= 3.13.9-2), python3-all-dev (= 3.13.9-2), python3-autocommand (= 2.2.2-3), python3-build (= 1.2.2-4), python3-cykhash (= 2.0.0-3+b4), python3-decorator (= 5.2.1-2), python3-dev (= 3.13.9-2), python3-hmmlearn (= 0.3.2-2+b3), python3-inflect (= 7.5.0-1), python3-iniconfig (= 2.1.0-1), python3-installer (= 0.7.0+dfsg1-3), python3-jaraco.context (= 6.0.1-1), python3-jaraco.functools (= 4.1.0-1), python3-jaraco.text (= 4.0.0-1), python3-joblib (= 1.5.2-1), python3-minimal (= 3.13.9-2), python3-more-itertools (= 10.8.0-1), python3-numpy (= 1:2.3.5+ds-2+b1), python3-numpy-dev (= 1:2.3.5+ds-2+b1), python3-packaging (= 25.0-1), python3-pip (= 25.3+dfsg-1), python3-pkg-resources (= 78.1.1-0.1), python3-pluggy (= 1.6.0-1), python3-pygments (= 2.18.0+dfsg-2), python3-pyproject-hooks (= 1.2.0-1), python3-pytest (= 8.4.2-1), python3-scipy (= 1.16.3-2), python3-setuptools (= 78.1.1-0.1), python3-sklearn (= 1.7.2+dfsg-3), python3-sklearn-lib (= 1.7.2+dfsg-3+b2), python3-threadpoolctl (= 3.1.0-1), python3-typeguard (= 4.4.4-1), python3-typing-extensions (= 4.15.0-1), python3-wheel (= 0.46.1-2), python3-zipp (= 3.23.0-1), python3.13 (= 3.13.9-1), python3.13-dev (= 3.13.9-1), python3.13-minimal (= 3.13.9-1), python3.14 (= 3.14.0-5), python3.14-dev (= 3.14.0-5), python3.14-minimal (= 3.14.0-5), readline-common (= 8.3-3), rpcsvc-proto (= 1.4.3-1), sed (= 4.9-2), sensible-utils (= 0.0.26), sysvinit-utils (= 3.15-6), tar (= 1.35+dfsg-3.1), tzdata (= 2025b-5), util-linux (= 2.41.2-4), xz-utils (= 5.8.1-2), zlib1g (= 1:1.3.dfsg+really1.3.1-1+b1), zlib1g-dev (= 1:1.3.dfsg+really1.3.1-1+b1) Environment: DEB_BUILD_OPTIONS="parallel=8" LANG="C.UTF-8" LC_COLLATE="C.UTF-8" LC_CTYPE="C.UTF-8" SOURCE_DATE_EPOCH="1764973651" +------------------------------------------------------------------------------+ | Package contents Thu, 08 Jan 2026 07:05:42 +0000 | +------------------------------------------------------------------------------+ macs-dbgsym_3.0.2-2+b1_armhf.deb -------------------------------- new Debian package, version 2.0. size 24239684 bytes: control archive=2872 bytes. 2385 bytes, 12 lines control 5384 bytes, 51 lines md5sums Package: macs-dbgsym Source: macs (3.0.2-2) Version: 3.0.2-2+b1 Auto-Built-Package: debug-symbols Architecture: armhf Maintainer: Debian Med Packaging Team Installed-Size: 25309 Depends: macs (= 3.0.2-2+b1) Section: debug Priority: optional Description: debug symbols for macs Build-Ids: 0a21396f8c3d11e231eb77779799fbb45cc3eaf0 1343eaaeb9d73cafcc4b818b6c55c5acdb893dfe 15ce404ab317ff9c9231ad67b82bdf5b2d0a2d0d 160093f11a3b37640254738ba738bce7ad9cc70f 1addd1dec5498322ba3a601a3c481604f46ea02f 1f670c7219aa5237c4b38816ffc6d8ada5478032 2230044c45e98861cf46671e16327b70946def50 320816ce0399c28e87809c283dc425dbed7f3a8c 38cac0d30afbc219b559a79f123c86c5061da0a4 3ac1bd3bd3d32da4d5d4bb652af50e695db3651e 3c459456b347d06e0efff5511003ff72240e0874 3fe67bf251fe19e807988b7728579006f98aa754 400de0d19e672a5afa5ab3ec2e8f74e86c03ffcc 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python3-cykhash, python3-hmmlearn, python3-numpy, python3-scipy, python3-sklearn, python3:any, libc6 (>= 2.38), zlib1g (>= 1:1.2.3.3) Section: science Priority: optional Homepage: https://github.com/taoliu/MACS/ Description: Model-based Analysis of ChIP-Seq on short reads sequencers MACS empirically models the length of the sequenced ChIP fragments, which tends to be shorter than sonication or library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local biases in the genome sequence, allowing for more sensitive and robust prediction. 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2025-12-05 22:27 ./usr/share/man/man1/macs3_callpeak.1.gz -rw-r--r-- root/root 881 2025-12-05 22:27 ./usr/share/man/man1/macs3_cmbreps.1.gz -rw-r--r-- root/root 2046 2025-12-05 22:27 ./usr/share/man/man1/macs3_filterdup.1.gz -rw-r--r-- root/root 1717 2025-12-05 22:27 ./usr/share/man/man1/macs3_pileup.1.gz -rw-r--r-- root/root 1867 2025-12-05 22:27 ./usr/share/man/man1/macs3_predictd.1.gz -rw-r--r-- root/root 1595 2025-12-05 22:27 ./usr/share/man/man1/macs3_randsample.1.gz -rw-r--r-- root/root 1361 2025-12-05 22:27 ./usr/share/man/man1/macs3_refinepeak.1.gz +------------------------------------------------------------------------------+ | Post Build Thu, 08 Jan 2026 07:05:45 +0000 | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup Thu, 08 Jan 2026 07:05:45 +0000 | +------------------------------------------------------------------------------+ Purging /build/reproducible-path Not cleaning session: cloned chroot in use +------------------------------------------------------------------------------+ | Summary Thu, 08 Jan 2026 07:05:49 +0000 | +------------------------------------------------------------------------------+ Build Architecture: armhf Build Type: any Build-Space: 2858072 Build-Time: 1962 Distribution: unstable Host Architecture: armhf Install-Time: 5 Job: /srv/rebuilderd/tmp/rebuilderdNMzwn6/inputs/macs_3.0.2-2.dsc Machine Architecture: arm64 Package: macs Package-Time: 1984 Source-Version: 3.0.2-2 Space: 2858072 Status: successful Version: 3.0.2-2+b1 -------------------------------------------------------------------------------- Finished at 2026-01-08T07:05:41Z Build needed 00:33:04, 2858072k disk space build artifacts stored in /srv/rebuilderd/tmp/rebuilderdNMzwn6/out checking macs-dbgsym_3.0.2-2+b1_armhf.deb: size differs for macs-dbgsym_3.0.2-2+b1_armhf.deb